HEADER TRANSFERASE 07-JUN-18 6A1D TITLE CRYSTAL STRUCTURE OF A SYNTHASE 1 FROM SANTALUM ALBUM IN COMPLEX WITH TITLE 2 LIGAND COMPND MOL_ID: 1; COMPND 2 MOLECULE: SESQUISABINENE B SYNTHASE 1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SANTALUM ALBUM; SOURCE 3 ORGANISM_COMMON: WHITE SANDALWOOD; SOURCE 4 ORGANISM_TAXID: 35974; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ROSSETA2(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS LIGAND SYNTHASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR X.HAN,T.P.KO,W.D.LIU,C.C.CHEN,R.T.GUO REVDAT 2 22-NOV-23 6A1D 1 LINK REVDAT 1 12-JUN-19 6A1D 0 JRNL AUTH X.HAN,T.P.KO,W.D.LIU,C.C.CHEN,R.T.GUO JRNL TITL CRYSTAL STRUCTURE OF A SYNTHASE 1 FROM SANTALUM ALBUM IN JRNL TITL 2 COMPLEX WITH LIGAND JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.78 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0222 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.78 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.94 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 59554 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.167 REMARK 3 FREE R VALUE : 0.206 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3148 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.78 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.83 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4221 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.38 REMARK 3 BIN R VALUE (WORKING SET) : 0.2210 REMARK 3 BIN FREE R VALUE SET COUNT : 239 REMARK 3 BIN FREE R VALUE : 0.2510 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4227 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 33 REMARK 3 SOLVENT ATOMS : 434 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.26000 REMARK 3 B22 (A**2) : -0.37000 REMARK 3 B33 (A**2) : 0.11000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.103 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.105 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.077 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.525 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.954 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4373 ; 0.010 ; 0.015 REMARK 3 BOND LENGTHS OTHERS (A): 3902 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5910 ; 1.469 ; 1.747 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9125 ; 0.521 ; 1.732 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 513 ; 6.327 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 197 ;33.172 ;20.761 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 665 ;14.493 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 27 ;15.963 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 548 ; 0.283 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4841 ; 0.013 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 853 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6A1D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1300008009. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JAN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL13C1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62747 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.780 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.78 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.84 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.48100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2ONG REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, HEPES, MGCL2, PH REMARK 280 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.46500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.46500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 42.71850 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 69.74350 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 42.71850 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 69.74350 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 55.46500 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 42.71850 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 69.74350 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 55.46500 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 42.71850 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 69.74350 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -10.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 895 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 997 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1133 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASP A 2 REMARK 465 LEU A 3 REMARK 465 CYS A 4 REMARK 465 GLN A 5 REMARK 465 ILE A 6 REMARK 465 PRO A 7 REMARK 465 PRO A 8 REMARK 465 THR A 9 REMARK 465 SER A 10 REMARK 465 PRO A 11 REMARK 465 ILE A 12 REMARK 465 SER A 13 REMARK 465 PRO A 14 REMARK 465 SER A 15 REMARK 465 VAL A 16 REMARK 465 PRO A 17 REMARK 465 PHE A 18 REMARK 465 ASN A 19 REMARK 465 GLY A 20 REMARK 465 ASP A 21 REMARK 465 ASP A 22 REMARK 465 SER A 23 REMARK 465 SER A 24 REMARK 465 VAL A 25 REMARK 465 VAL A 26 REMARK 465 ARG A 27 REMARK 465 ARG A 28 REMARK 465 SER A 29 REMARK 465 ALA A 30 REMARK 465 ASN A 31 REMARK 465 TYR A 32 REMARK 465 PRO A 33 REMARK 465 SER A 465 REMARK 465 PRO A 466 REMARK 465 ASP A 467 REMARK 465 GLU A 468 REMARK 465 MET A 469 REMARK 465 GLU A 470 REMARK 465 ARG A 471 REMARK 465 GLY A 472 REMARK 465 ASP A 473 REMARK 465 ASN A 474 REMARK 465 GLY A 539 REMARK 465 ASP A 540 REMARK 465 GLY A 541 REMARK 465 TYR A 542 REMARK 465 GLY A 543 REMARK 465 GLU A 565 REMARK 465 GLU A 566 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 95 24.05 -142.53 REMARK 500 PHE A 277 -158.39 -92.26 REMARK 500 LEU A 445 72.57 54.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1133 DISTANCE = 6.23 ANGSTROMS REMARK 525 HOH A1134 DISTANCE = 6.75 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 602 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 316 OD2 REMARK 620 2 ASP A 320 OD2 95.6 REMARK 620 3 6R2 A 601 OAH 96.3 77.1 REMARK 620 4 6R2 A 601 OAF 85.0 168.6 91.6 REMARK 620 5 HOH A 816 O 170.8 88.7 92.5 92.3 REMARK 620 6 HOH A 896 O 87.0 93.1 169.9 98.2 84.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 603 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 316 OD1 REMARK 620 2 ASP A 320 OD2 93.2 REMARK 620 3 6R2 A 601 OAH 90.7 76.4 REMARK 620 4 HOH A 797 O 98.5 164.1 92.7 REMARK 620 5 HOH A 868 O 86.0 97.3 172.8 94.2 REMARK 620 6 HOH A 906 O 173.2 88.3 96.2 81.3 87.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 6R2 A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 604 DBREF1 6A1D A 1 566 UNP A0A0A0RDR2_SANAL DBREF2 6A1D A A0A0A0RDR2 1 566 SEQRES 1 A 566 MET ASP LEU CYS GLN ILE PRO PRO THR SER PRO ILE SER SEQRES 2 A 566 PRO SER VAL PRO PHE ASN GLY ASP ASP SER SER VAL VAL SEQRES 3 A 566 ARG ARG SER ALA ASN TYR PRO ALA ASN LEU TRP ASP TYR SEQRES 4 A 566 ASP PHE LEU GLN SER LEU GLY ARG HIS SER SER VAL THR SEQRES 5 A 566 GLU GLU HIS VAL GLY LEU ALA GLU LYS LEU LYS GLY GLU SEQRES 6 A 566 VAL LYS SER LEU ILE THR GLY PRO MET GLU PRO LEU ALA SEQRES 7 A 566 LYS LEU GLU PHE ILE ASP SER VAL ARG ARG LEU GLY LEU SEQRES 8 A 566 LYS TYR GLN PHE GLU THR GLU MET LYS GLU ALA LEU ALA SEQRES 9 A 566 ASN ILE SER LYS ASP GLY TYR ASP SER TRP TRP VAL ASP SEQRES 10 A 566 ASN LEU ARG ALA THR ALA LEU ARG PHE ARG LEU LEU ARG SEQRES 11 A 566 GLU ASN GLY ILE PHE VAL PRO GLN ASP VAL PHE GLU ARG SEQRES 12 A 566 PHE GLN ASN LYS GLU THR GLY LYS PHE LYS ASN GLU LEU SEQRES 13 A 566 CYS GLU ASP VAL LYS GLY LEU LEU ASN LEU TYR GLU ALA SEQRES 14 A 566 SER PHE LEU GLY TRP GLU GLY GLU ASP ILE LEU ASP GLU SEQRES 15 A 566 ALA ARG THR PHE SER THR ALA GLN LEU LYS ASN VAL GLU SEQRES 16 A 566 GLY LYS ILE SER SER PRO ASN LEU ALA LYS ILE VAL HIS SEQRES 17 A 566 HIS ALA LEU ASP LEU PRO LEU HIS TRP ARG ALA ILE ARG SEQRES 18 A 566 TYR GLU ALA ARG TRP PHE ILE ASP ILE TYR GLU ASP GLU SEQRES 19 A 566 GLU ASP MET ASN PRO THR LEU LEU LYS TYR ALA LYS LEU SEQRES 20 A 566 ASP PHE ASN ILE VAL GLN SER PHE HIS GLN ALA GLU ILE SEQRES 21 A 566 GLY ARG LEU ALA ARG TRP TRP VAL GLY THR GLY LEU ASP SEQRES 22 A 566 LYS LEU PRO PHE ALA ARG ASN GLY LEU ILE GLN SER TYR SEQRES 23 A 566 MET TYR ALA ILE GLY MET LEU PHE GLU PRO HIS LEU GLY SEQRES 24 A 566 GLU VAL ARG GLU MET GLU ALA LYS VAL GLY ALA LEU ILE SEQRES 25 A 566 THR THR ILE ASP ASP VAL TYR ASP VAL TYR GLY THR MET SEQRES 26 A 566 GLU GLU LEU GLU LEU PHE THR ASP ILE THR GLU ARG TRP SEQRES 27 A 566 ASP ILE ASN ARG VAL ASP GLN LEU PRO ARG ASN ILE ARG SEQRES 28 A 566 MET PRO LEU LEU THR MET PHE ASN THR SER ASN ASP ILE SEQRES 29 A 566 GLY TYR TRP ALA LEU LYS GLU ARG GLY PHE ASN GLY ILE SEQRES 30 A 566 PRO TYR THR ALA LYS VAL TRP ALA ASP GLN LEU LYS SER SEQRES 31 A 566 TYR THR LYS GLU ALA LYS TRP PHE HIS GLU GLY HIS LYS SEQRES 32 A 566 PRO THR LEU GLU GLU TYR LEU GLU ASN ALA LEU VAL SER SEQRES 33 A 566 ILE GLY PHE PRO ASN LEU LEU VAL THR SER TYR LEU LEU SEQRES 34 A 566 THR VAL ASP ASN PRO THR LYS GLU LYS LEU ASP TYR VAL SEQRES 35 A 566 ASP SER LEU PRO LEU PHE VAL ARG ALA SER CYS ILE LEU SEQRES 36 A 566 CYS ARG ILE ILE ASN ASP LEU GLY THR SER PRO ASP GLU SEQRES 37 A 566 MET GLU ARG GLY ASP ASN LEU LYS SER ILE GLN CYS TYR SEQRES 38 A 566 MET ASN GLU THR GLY ALA SER GLN GLU VAL ALA ARG GLU SEQRES 39 A 566 HIS ILE GLU GLY LEU VAL ARG MET TRP TRP LYS ARG LEU SEQRES 40 A 566 ASN LYS CYS LEU PHE GLU PRO SER PRO PHE THR GLU PRO SEQRES 41 A 566 PHE LEU SER PHE THR ILE ASN VAL VAL ARG GLY SER HIS SEQRES 42 A 566 PHE PHE TYR GLN TYR GLY ASP GLY TYR GLY ASN ALA GLU SEQRES 43 A 566 SER TRP THR LYS ASN GLN GLY MET SER VAL LEU ILE HIS SEQRES 44 A 566 PRO ILE THR LEU ASP GLU GLU HET 6R2 A 601 26 HET MG A 602 1 HET MG A 603 1 HET SO4 A 604 5 HETNAM 6R2 [BIS(CHLORANYL)-[OXIDANYL-[(2~{E},6~{E})-3,7,11- HETNAM 2 6R2 TRIMETHYLDODECA-2,6,10- HETNAM 3 6R2 TRIENOXY]PHOSPHORYL]METHYL]PHOSPHONIC ACID HETNAM MG MAGNESIUM ION HETNAM SO4 SULFATE ION FORMUL 2 6R2 C16 H28 CL2 O6 P2 FORMUL 3 MG 2(MG 2+) FORMUL 5 SO4 O4 S 2- FORMUL 6 HOH *434(H2 O) HELIX 1 AA1 ASP A 38 LEU A 45 1 8 HELIX 2 AA2 THR A 52 GLY A 72 1 21 HELIX 3 AA3 GLU A 75 LEU A 89 1 15 HELIX 4 AA4 LEU A 91 LYS A 108 1 18 HELIX 5 AA5 ASN A 118 ASN A 132 1 15 HELIX 6 AA6 PRO A 137 GLN A 145 5 9 HELIX 7 AA7 LYS A 153 GLU A 158 5 6 HELIX 8 AA8 ASP A 159 PHE A 171 1 13 HELIX 9 AA9 GLU A 177 GLU A 195 1 19 HELIX 10 AB1 GLY A 196 ILE A 198 5 3 HELIX 11 AB2 SER A 200 LEU A 213 1 14 HELIX 12 AB3 PRO A 214 ARG A 218 5 5 HELIX 13 AB4 ALA A 219 ASP A 233 1 15 HELIX 14 AB5 ASN A 238 GLY A 271 1 34 HELIX 15 AB6 LEU A 272 LEU A 275 5 4 HELIX 16 AB7 ASN A 280 LEU A 293 1 14 HELIX 17 AB8 GLU A 295 HIS A 297 5 3 HELIX 18 AB9 LEU A 298 VAL A 321 1 24 HELIX 19 AC1 THR A 324 TRP A 338 1 15 HELIX 20 AC2 ARG A 342 LEU A 346 5 5 HELIX 21 AC3 PRO A 347 GLY A 373 1 27 HELIX 22 AC4 GLY A 376 GLY A 401 1 26 HELIX 23 AC5 THR A 405 ILE A 417 1 13 HELIX 24 AC6 GLY A 418 VAL A 431 1 14 HELIX 25 AC7 THR A 435 SER A 444 1 10 HELIX 26 AC8 PRO A 446 GLY A 463 1 18 HELIX 27 AC9 LYS A 476 GLY A 486 1 11 HELIX 28 AD1 SER A 488 GLU A 513 1 26 HELIX 29 AD2 PRO A 520 TYR A 536 1 17 HELIX 30 AD3 ALA A 545 ILE A 558 1 14 LINK OD2 ASP A 316 MG MG A 602 1555 1555 2.05 LINK OD1 ASP A 316 MG MG A 603 1555 1555 2.09 LINK OD2 ASP A 320 MG MG A 602 1555 1555 2.05 LINK OD2 ASP A 320 MG MG A 603 1555 1555 2.07 LINK OAH 6R2 A 601 MG MG A 602 1555 1555 1.97 LINK OAF 6R2 A 601 MG MG A 602 1555 1555 1.87 LINK OAH 6R2 A 601 MG MG A 603 1555 1555 1.98 LINK MG MG A 602 O HOH A 816 1555 1555 2.21 LINK MG MG A 602 O HOH A 896 1555 1555 2.19 LINK MG MG A 603 O HOH A 797 1555 1555 2.17 LINK MG MG A 603 O HOH A 868 1555 1555 2.19 LINK MG MG A 603 O HOH A 906 1555 1555 2.18 CISPEP 1 GLU A 519 PRO A 520 0 8.86 SITE 1 AC1 20 GLN A 284 SER A 285 TYR A 288 GLY A 309 SITE 2 AC1 20 ILE A 312 ASP A 316 ASP A 320 ILE A 417 SITE 3 AC1 20 LEU A 422 ARG A 457 ASN A 460 LYS A 476 SITE 4 AC1 20 TYR A 536 MG A 602 MG A 603 HOH A 797 SITE 5 AC1 20 HOH A 816 HOH A 823 HOH A 831 HOH A 896 SITE 1 AC2 6 ASP A 316 ASP A 320 6R2 A 601 MG A 603 SITE 2 AC2 6 HOH A 816 HOH A 896 SITE 1 AC3 7 ASP A 316 ASP A 320 6R2 A 601 MG A 602 SITE 2 AC3 7 HOH A 797 HOH A 868 HOH A 906 SITE 1 AC4 7 TRP A 174 ARG A 450 TRP A 503 ARG A 506 SITE 2 AC4 7 LYS A 509 GLU A 513 HOH A1004 CRYST1 85.437 139.487 110.930 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011705 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007169 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009015 0.00000