HEADER REPLICATION 21-JUN-18 6A4V TITLE OPEN READING FRAME 49 COMPND MOL_ID: 1; COMPND 2 MOLECULE: 49 PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ORF49 PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MURID HERPESVIRUS 4; SOURCE 3 ORGANISM_COMMON: MUHV-4; SOURCE 4 ORGANISM_TAXID: 33708; SOURCE 5 GENE: BNLF1, 49, GAMMAHV.ORF49; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GAMMA HERPESVIRUS 68 OPEN READING FRAME 49, ORF49 POLY (ADP-RIBOSE) KEYWDS 2 POLYMERASE-1 (PARP-1), REPLICATION EXPDTA X-RAY DIFFRACTION AUTHOR K.Y.HWANG,M.J.SONG,J.S.KIM,W.C.CHEONG REVDAT 3 27-MAR-24 6A4V 1 REMARK REVDAT 2 18-DEC-19 6A4V 1 SPRSDE JRNL REVDAT 1 26-JUN-19 6A4V 0 SPRSDE 18-DEC-19 6A4V 5YX5 JRNL AUTH W.C.CHUNG,J.KIM,B.C.KIM,H.R.KANG,J.SON,H.KI,K.Y.HWANG, JRNL AUTH 2 M.J.SONG JRNL TITL STRUCTURE-BASED MECHANISM OF ACTION OF A VIRAL JRNL TITL 2 POLY(ADP-RIBOSE) POLYMERASE 1-INTERACTING PROTEIN JRNL TITL 3 FACILITATING VIRUS REPLICATION. JRNL REF IUCRJ V. 5 866 2018 JRNL REFN ESSN 2052-2525 JRNL PMID 30443370 JRNL DOI 10.1107/S2052252518013854 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0230 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.82 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 77108 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.241 REMARK 3 R VALUE (WORKING SET) : 0.239 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4069 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5276 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.40 REMARK 3 BIN R VALUE (WORKING SET) : 0.3230 REMARK 3 BIN FREE R VALUE SET COUNT : 281 REMARK 3 BIN FREE R VALUE : 0.3420 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4380 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 60 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 51.49 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.83 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.30000 REMARK 3 B22 (A**2) : 1.30000 REMARK 3 B33 (A**2) : -2.61000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.031 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.031 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.072 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.682 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.932 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.910 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4466 ; 0.015 ; 0.014 REMARK 3 BOND LENGTHS OTHERS (A): 4110 ; 0.001 ; 0.017 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6054 ; 1.836 ; 1.635 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9596 ; 1.107 ; 1.627 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 533 ; 7.331 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 224 ;36.801 ;23.125 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 811 ;19.308 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;20.481 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 589 ; 0.096 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4857 ; 0.010 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 839 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2150 ; 6.594 ; 5.375 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2149 ; 6.591 ; 5.373 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2677 ; 8.806 ; 8.033 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2678 ; 8.806 ; 8.036 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2316 ; 7.183 ; 5.919 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2316 ; 7.183 ; 5.919 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3378 ;10.010 ; 8.645 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5256 ;12.630 ;63.695 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5254 ;12.634 ;63.704 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 2 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.900 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : -K, -H, -L REMARK 3 TWIN FRACTION : 0.100 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6A4V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-JUN-18. REMARK 100 THE DEPOSITION ID IS D_1300008157. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-1A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 272254 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.5 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : 0.07900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.9400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.41400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSOL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 76.96 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS-HCL (PH 8.2), 0.33M REMARK 280 SODIUM/POTASSIUM TARTRATE 0.5% POLYEHYLENE GLYCEROL 5000 MONO- REMARK 280 METHYL ETHER, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 104.77200 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 52.38600 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 52.38600 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 104.77200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -33 REMARK 465 GLY A -32 REMARK 465 SER A -31 REMARK 465 SER A -30 REMARK 465 HIS A -29 REMARK 465 HIS A -28 REMARK 465 HIS A -27 REMARK 465 HIS A -26 REMARK 465 HIS A -25 REMARK 465 HIS A -24 REMARK 465 SER A -23 REMARK 465 SER A -22 REMARK 465 GLY A -21 REMARK 465 LEU A -20 REMARK 465 VAL A -19 REMARK 465 PRO A -18 REMARK 465 ARG A -17 REMARK 465 GLY A -16 REMARK 465 SER A -15 REMARK 465 HIS A -14 REMARK 465 MET A -13 REMARK 465 ALA A -12 REMARK 465 SER A -11 REMARK 465 MET A -10 REMARK 465 THR A -9 REMARK 465 GLY A -8 REMARK 465 GLY A -7 REMARK 465 GLN A -6 REMARK 465 GLN A -5 REMARK 465 MET A -4 REMARK 465 GLY A -3 REMARK 465 ARG A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 ALA A 175 REMARK 465 ASP A 176 REMARK 465 THR A 231 REMARK 465 ASN A 232 REMARK 465 LEU A 233 REMARK 465 LEU A 234 REMARK 465 CYS A 235 REMARK 465 TYR A 236 REMARK 465 SER A 237 REMARK 465 LEU A 281 REMARK 465 PRO A 282 REMARK 465 THR A 283 REMARK 465 LEU A 284 REMARK 465 SER A 285 REMARK 465 ALA A 286 REMARK 465 GLU A 287 REMARK 465 GLY A 288 REMARK 465 GLU A 289 REMARK 465 SER A 290 REMARK 465 GLU A 291 REMARK 465 SER A 292 REMARK 465 GLU A 293 REMARK 465 ALA A 294 REMARK 465 ILE A 295 REMARK 465 ALA A 296 REMARK 465 ALA A 297 REMARK 465 GLU A 298 REMARK 465 ILE A 299 REMARK 465 PRO A 300 REMARK 465 SER A 301 REMARK 465 LEU A 302 REMARK 465 GLU A 303 REMARK 465 MET B -33 REMARK 465 GLY B -32 REMARK 465 SER B -31 REMARK 465 SER B -30 REMARK 465 HIS B -29 REMARK 465 HIS B -28 REMARK 465 HIS B -27 REMARK 465 HIS B -26 REMARK 465 HIS B -25 REMARK 465 HIS B -24 REMARK 465 SER B -23 REMARK 465 SER B -22 REMARK 465 GLY B -21 REMARK 465 LEU B -20 REMARK 465 VAL B -19 REMARK 465 PRO B -18 REMARK 465 ARG B -17 REMARK 465 GLY B -16 REMARK 465 SER B -15 REMARK 465 HIS B -14 REMARK 465 MET B -13 REMARK 465 ALA B -12 REMARK 465 SER B -11 REMARK 465 MET B -10 REMARK 465 THR B -9 REMARK 465 GLY B -8 REMARK 465 GLY B -7 REMARK 465 GLN B -6 REMARK 465 GLN B -5 REMARK 465 MET B -4 REMARK 465 GLY B -3 REMARK 465 ARG B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 ALA B 175 REMARK 465 ASP B 176 REMARK 465 THR B 231 REMARK 465 ASN B 232 REMARK 465 LEU B 233 REMARK 465 LEU B 234 REMARK 465 CYS B 235 REMARK 465 TYR B 236 REMARK 465 LEU B 281 REMARK 465 PRO B 282 REMARK 465 THR B 283 REMARK 465 LEU B 284 REMARK 465 SER B 285 REMARK 465 ALA B 286 REMARK 465 GLU B 287 REMARK 465 GLY B 288 REMARK 465 GLU B 289 REMARK 465 SER B 290 REMARK 465 GLU B 291 REMARK 465 SER B 292 REMARK 465 GLU B 293 REMARK 465 ALA B 294 REMARK 465 ILE B 295 REMARK 465 ALA B 296 REMARK 465 ALA B 297 REMARK 465 GLU B 298 REMARK 465 ILE B 299 REMARK 465 PRO B 300 REMARK 465 SER B 301 REMARK 465 LEU B 302 REMARK 465 GLU B 303 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH2 ARG A 254 NH2 ARG B 65 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 222 NZ LYS B 221 2544 2.06 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU B 266 CD GLU B 266 OE1 0.073 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 46 CG - CD - NE ANGL. DEV. = 12.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 29 -70.26 -51.54 REMARK 500 THR A 75 -30.02 -134.64 REMARK 500 THR A 173 89.36 -158.61 REMARK 500 GLU A 228 13.94 -65.71 REMARK 500 SER A 239 -134.52 -127.73 REMARK 500 SER B 137 85.90 52.16 REMARK 500 ASP B 139 152.23 76.01 REMARK 500 LEU B 171 -31.77 179.18 REMARK 500 SER B 229 34.55 -86.40 REMARK 500 LYS B 279 70.72 -67.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 81 0.09 SIDE CHAIN REMARK 500 ARG A 254 0.08 SIDE CHAIN REMARK 500 ARG A 272 0.09 SIDE CHAIN REMARK 500 ARG B 46 0.12 SIDE CHAIN REMARK 500 ARG B 60 0.10 SIDE CHAIN REMARK 500 ARG B 254 0.12 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL DBREF 6A4V A 1 301 UNP P88987 P88987_MHV68 1 301 DBREF 6A4V B 1 301 UNP P88987 P88987_MHV68 1 301 SEQADV 6A4V MET A -33 UNP P88987 EXPRESSION TAG SEQADV 6A4V GLY A -32 UNP P88987 EXPRESSION TAG SEQADV 6A4V SER A -31 UNP P88987 EXPRESSION TAG SEQADV 6A4V SER A -30 UNP P88987 EXPRESSION TAG SEQADV 6A4V HIS A -29 UNP P88987 EXPRESSION TAG SEQADV 6A4V HIS A -28 UNP P88987 EXPRESSION TAG SEQADV 6A4V HIS A -27 UNP P88987 EXPRESSION TAG SEQADV 6A4V HIS A -26 UNP P88987 EXPRESSION TAG SEQADV 6A4V HIS A -25 UNP P88987 EXPRESSION TAG SEQADV 6A4V HIS A -24 UNP P88987 EXPRESSION TAG SEQADV 6A4V SER A -23 UNP P88987 EXPRESSION TAG SEQADV 6A4V SER A -22 UNP P88987 EXPRESSION TAG SEQADV 6A4V GLY A -21 UNP P88987 EXPRESSION TAG SEQADV 6A4V LEU A -20 UNP P88987 EXPRESSION TAG SEQADV 6A4V VAL A -19 UNP P88987 EXPRESSION TAG SEQADV 6A4V PRO A -18 UNP P88987 EXPRESSION TAG SEQADV 6A4V ARG A -17 UNP P88987 EXPRESSION TAG SEQADV 6A4V GLY A -16 UNP P88987 EXPRESSION TAG SEQADV 6A4V SER A -15 UNP P88987 EXPRESSION TAG SEQADV 6A4V HIS A -14 UNP P88987 EXPRESSION TAG SEQADV 6A4V MET A -13 UNP P88987 EXPRESSION TAG SEQADV 6A4V ALA A -12 UNP P88987 EXPRESSION TAG SEQADV 6A4V SER A -11 UNP P88987 EXPRESSION TAG SEQADV 6A4V MET A -10 UNP P88987 EXPRESSION TAG SEQADV 6A4V THR A -9 UNP P88987 EXPRESSION TAG SEQADV 6A4V GLY A -8 UNP P88987 EXPRESSION TAG SEQADV 6A4V GLY A -7 UNP P88987 EXPRESSION TAG SEQADV 6A4V GLN A -6 UNP P88987 EXPRESSION TAG SEQADV 6A4V GLN A -5 UNP P88987 EXPRESSION TAG SEQADV 6A4V MET A -4 UNP P88987 EXPRESSION TAG SEQADV 6A4V GLY A -3 UNP P88987 EXPRESSION TAG SEQADV 6A4V ARG A -2 UNP P88987 EXPRESSION TAG SEQADV 6A4V GLY A -1 UNP P88987 EXPRESSION TAG SEQADV 6A4V SER A 0 UNP P88987 EXPRESSION TAG SEQADV 6A4V LEU A 302 UNP P88987 EXPRESSION TAG SEQADV 6A4V GLU A 303 UNP P88987 EXPRESSION TAG SEQADV 6A4V MET B -33 UNP P88987 EXPRESSION TAG SEQADV 6A4V GLY B -32 UNP P88987 EXPRESSION TAG SEQADV 6A4V SER B -31 UNP P88987 EXPRESSION TAG SEQADV 6A4V SER B -30 UNP P88987 EXPRESSION TAG SEQADV 6A4V HIS B -29 UNP P88987 EXPRESSION TAG SEQADV 6A4V HIS B -28 UNP P88987 EXPRESSION TAG SEQADV 6A4V HIS B -27 UNP P88987 EXPRESSION TAG SEQADV 6A4V HIS B -26 UNP P88987 EXPRESSION TAG SEQADV 6A4V HIS B -25 UNP P88987 EXPRESSION TAG SEQADV 6A4V HIS B -24 UNP P88987 EXPRESSION TAG SEQADV 6A4V SER B -23 UNP P88987 EXPRESSION TAG SEQADV 6A4V SER B -22 UNP P88987 EXPRESSION TAG SEQADV 6A4V GLY B -21 UNP P88987 EXPRESSION TAG SEQADV 6A4V LEU B -20 UNP P88987 EXPRESSION TAG SEQADV 6A4V VAL B -19 UNP P88987 EXPRESSION TAG SEQADV 6A4V PRO B -18 UNP P88987 EXPRESSION TAG SEQADV 6A4V ARG B -17 UNP P88987 EXPRESSION TAG SEQADV 6A4V GLY B -16 UNP P88987 EXPRESSION TAG SEQADV 6A4V SER B -15 UNP P88987 EXPRESSION TAG SEQADV 6A4V HIS B -14 UNP P88987 EXPRESSION TAG SEQADV 6A4V MET B -13 UNP P88987 EXPRESSION TAG SEQADV 6A4V ALA B -12 UNP P88987 EXPRESSION TAG SEQADV 6A4V SER B -11 UNP P88987 EXPRESSION TAG SEQADV 6A4V MET B -10 UNP P88987 EXPRESSION TAG SEQADV 6A4V THR B -9 UNP P88987 EXPRESSION TAG SEQADV 6A4V GLY B -8 UNP P88987 EXPRESSION TAG SEQADV 6A4V GLY B -7 UNP P88987 EXPRESSION TAG SEQADV 6A4V GLN B -6 UNP P88987 EXPRESSION TAG SEQADV 6A4V GLN B -5 UNP P88987 EXPRESSION TAG SEQADV 6A4V MET B -4 UNP P88987 EXPRESSION TAG SEQADV 6A4V GLY B -3 UNP P88987 EXPRESSION TAG SEQADV 6A4V ARG B -2 UNP P88987 EXPRESSION TAG SEQADV 6A4V GLY B -1 UNP P88987 EXPRESSION TAG SEQADV 6A4V SER B 0 UNP P88987 EXPRESSION TAG SEQADV 6A4V LEU B 302 UNP P88987 EXPRESSION TAG SEQADV 6A4V GLU B 303 UNP P88987 EXPRESSION TAG SEQRES 1 A 337 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 337 LEU VAL PRO ARG GLY SER HIS MET ALA SER MET THR GLY SEQRES 3 A 337 GLY GLN GLN MET GLY ARG GLY SER MET GLY ASP GLU PHE SEQRES 4 A 337 TYR TYR PRO SER LEU GLU SER VAL VAL HIS THR PHE CYS SEQRES 5 A 337 VAL ILE ASP THR ARG GLU HIS ASN ARG VAL SER ALA CYS SEQRES 6 A 337 LEU CYS LYS LEU GLN VAL LEU CYS LYS ILE CYS GLN THR SEQRES 7 A 337 LEU ARG HIS ASN LEU ASP THR GLU PRO PHE LEU LEU PRO SEQRES 8 A 337 HIS LEU ARG GLU LEU ILE ILE ARG HIS LEU THR LEU LEU SEQRES 9 A 337 GLU ARG LEU SER THR THR SER LYS PHE GLN ARG ILE LEU SEQRES 10 A 337 ASP TYR MET LYS LEU SER LEU GLU ALA ASN ASP SER ASN SEQRES 11 A 337 LEU LEU GLN ASP LEU ALA ILE GLY THR VAL ASN LEU LEU SEQRES 12 A 337 GLY CYS GLN SER PRO GLU ILE LEU SER ILE PRO TYR ASP SEQRES 13 A 337 LYS ASP GLN PRO VAL HIS GLU TRP CYS ALA CYS PHE LEU SEQRES 14 A 337 THR SER VAL ASP GLU GLU ALA LEU ARG LYS ILE SER SER SEQRES 15 A 337 MET LEU ASP ASN LYS HIS PHE SER TYR MET TYR ASN PHE SEQRES 16 A 337 LYS THR PHE LEU LYS TYR SER LEU GLU LEU GLU THR ALA SEQRES 17 A 337 ALA ASP PHE ASP LEU SER THR GLY LEU ASN VAL LEU VAL SEQRES 18 A 337 TYR TRP VAL SER VAL PHE LYS LEU PHE SER VAL CYS VAL SEQRES 19 A 337 GLN SER GLN PHE LEU LEU ASP SER LEU VAL ALA PHE ASN SEQRES 20 A 337 ALA LEU PHE LYS ASN HIS VAL LYS GLU LEU GLU ALA ILE SEQRES 21 A 337 VAL GLU SER ASP THR ASN LEU LEU CYS TYR SER THR SER SEQRES 22 A 337 VAL VAL TRP ALA LYS LEU SER ASN LEU ASN HIS LEU LEU SEQRES 23 A 337 HIS ARG LEU GLN THR SER ASN ASN THR LEU VAL PHE ASP SEQRES 24 A 337 GLU ILE LEU ILE CYS LEU ARG GLY LEU GLN ILE TYR ILE SEQRES 25 A 337 LYS CYS LEU PRO THR LEU SER ALA GLU GLY GLU SER GLU SEQRES 26 A 337 SER GLU ALA ILE ALA ALA GLU ILE PRO SER LEU GLU SEQRES 1 B 337 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 337 LEU VAL PRO ARG GLY SER HIS MET ALA SER MET THR GLY SEQRES 3 B 337 GLY GLN GLN MET GLY ARG GLY SER MET GLY ASP GLU PHE SEQRES 4 B 337 TYR TYR PRO SER LEU GLU SER VAL VAL HIS THR PHE CYS SEQRES 5 B 337 VAL ILE ASP THR ARG GLU HIS ASN ARG VAL SER ALA CYS SEQRES 6 B 337 LEU CYS LYS LEU GLN VAL LEU CYS LYS ILE CYS GLN THR SEQRES 7 B 337 LEU ARG HIS ASN LEU ASP THR GLU PRO PHE LEU LEU PRO SEQRES 8 B 337 HIS LEU ARG GLU LEU ILE ILE ARG HIS LEU THR LEU LEU SEQRES 9 B 337 GLU ARG LEU SER THR THR SER LYS PHE GLN ARG ILE LEU SEQRES 10 B 337 ASP TYR MET LYS LEU SER LEU GLU ALA ASN ASP SER ASN SEQRES 11 B 337 LEU LEU GLN ASP LEU ALA ILE GLY THR VAL ASN LEU LEU SEQRES 12 B 337 GLY CYS GLN SER PRO GLU ILE LEU SER ILE PRO TYR ASP SEQRES 13 B 337 LYS ASP GLN PRO VAL HIS GLU TRP CYS ALA CYS PHE LEU SEQRES 14 B 337 THR SER VAL ASP GLU GLU ALA LEU ARG LYS ILE SER SER SEQRES 15 B 337 MET LEU ASP ASN LYS HIS PHE SER TYR MET TYR ASN PHE SEQRES 16 B 337 LYS THR PHE LEU LYS TYR SER LEU GLU LEU GLU THR ALA SEQRES 17 B 337 ALA ASP PHE ASP LEU SER THR GLY LEU ASN VAL LEU VAL SEQRES 18 B 337 TYR TRP VAL SER VAL PHE LYS LEU PHE SER VAL CYS VAL SEQRES 19 B 337 GLN SER GLN PHE LEU LEU ASP SER LEU VAL ALA PHE ASN SEQRES 20 B 337 ALA LEU PHE LYS ASN HIS VAL LYS GLU LEU GLU ALA ILE SEQRES 21 B 337 VAL GLU SER ASP THR ASN LEU LEU CYS TYR SER THR SER SEQRES 22 B 337 VAL VAL TRP ALA LYS LEU SER ASN LEU ASN HIS LEU LEU SEQRES 23 B 337 HIS ARG LEU GLN THR SER ASN ASN THR LEU VAL PHE ASP SEQRES 24 B 337 GLU ILE LEU ILE CYS LEU ARG GLY LEU GLN ILE TYR ILE SEQRES 25 B 337 LYS CYS LEU PRO THR LEU SER ALA GLU GLY GLU SER GLU SEQRES 26 B 337 SER GLU ALA ILE ALA ALA GLU ILE PRO SER LEU GLU FORMUL 3 HOH *60(H2 O) HELIX 1 AA1 SER A 9 THR A 22 1 14 HELIX 2 AA2 ASN A 26 THR A 51 1 26 HELIX 3 AA3 PHE A 54 GLU A 71 1 18 HELIX 4 AA4 ARG A 72 SER A 74 5 3 HELIX 5 AA5 THR A 76 LEU A 90 1 15 HELIX 6 AA6 ASN A 96 SER A 113 1 18 HELIX 7 AA7 PRO A 114 ILE A 119 5 6 HELIX 8 AA8 PRO A 126 LEU A 135 1 10 HELIX 9 AA9 ASP A 139 ASP A 151 1 13 HELIX 10 AB1 ASN A 160 LEU A 171 1 12 HELIX 11 AB2 ASP A 178 SER A 202 1 25 HELIX 12 AB3 GLN A 203 GLU A 228 1 26 HELIX 13 AB4 VAL A 240 LEU A 255 1 16 HELIX 14 AB5 ASN A 260 CYS A 280 1 21 HELIX 15 AB6 SER B 9 GLU B 24 1 16 HELIX 16 AB7 ASN B 26 GLU B 52 1 27 HELIX 17 AB8 PHE B 54 GLU B 71 1 18 HELIX 18 AB9 THR B 76 ASN B 93 1 18 HELIX 19 AC1 ASN B 96 SER B 113 1 18 HELIX 20 AC2 PRO B 114 ILE B 119 5 6 HELIX 21 AC3 PRO B 126 LEU B 135 1 10 HELIX 22 AC4 VAL B 138 ASP B 151 1 14 HELIX 23 AC5 ASN B 160 GLU B 170 1 11 HELIX 24 AC6 ASP B 178 SER B 202 1 25 HELIX 25 AC7 GLN B 203 SER B 229 1 27 HELIX 26 AC8 SER B 239 GLN B 256 1 18 HELIX 27 AC9 ASN B 260 LYS B 279 1 20 SHEET 1 AA1 2 PHE A 5 TYR A 7 0 SHEET 2 AA1 2 MET A 158 TYR A 159 -1 O MET A 158 N TYR A 6 SHEET 1 AA2 2 PHE B 5 TYR B 7 0 SHEET 2 AA2 2 MET B 158 TYR B 159 -1 O MET B 158 N TYR B 6 CRYST1 134.179 134.179 157.158 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007453 0.004303 0.000000 0.00000 SCALE2 0.000000 0.008606 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006363 0.00000