HEADER TRANSCRIPTION 28-JUN-18 6A6K TITLE CRYSTAL STRUCTURE OF ESTROGEN-RELATED RECEPTOR-3 (ERR-GAMMA) LIGAND TITLE 2 BINDING DOMAIN WITH DN201000 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ESTROGEN-RELATED RECEPTOR GAMMA; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: UNP RESIDUES 222-458; COMPND 5 SYNONYM: ERR GAMMA-2,ESTROGEN RECEPTOR-RELATED PROTEIN 3; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ESRRG, ERR3, ERRG2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SODIUM IODIDE SYMPORTER (NIS), ANAPLASTIC THYROID CANCER, ESTROGEN- KEYWDS 2 RELATED RECEPTOR GAMMA, RADIOIODINE THERAPY, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR H.YOON,J.KIM,J.CHIN,S.J.CHO,J.SONG REVDAT 2 22-NOV-23 6A6K 1 REMARK REVDAT 1 10-APR-19 6A6K 0 JRNL AUTH J.KIM,J.SONG,H.D.JI,E.K.YOO,J.E.LEE,S.B.LEE,J.M.OH,S.LEE, JRNL AUTH 2 J.S.HWANG,H.YOON,D.S.KIM,S.J.LEE,M.JEONG,S.LEE,K.H.KIM, JRNL AUTH 3 H.S.CHOI,S.W.LEE,K.G.PARK,I.K.LEE,S.H.KIM,H.HWANG,Y.H.JEON, JRNL AUTH 4 J.CHIN,S.J.CHO JRNL TITL DISCOVERY OF POTENT, SELECTIVE, AND ORALLY BIOAVAILABLE JRNL TITL 2 ESTROGEN-RELATED RECEPTOR-GAMMA INVERSE AGONISTS TO RESTORE JRNL TITL 3 THE SODIUM IODIDE SYMPORTER FUNCTION IN ANAPLASTIC THYROID JRNL TITL 4 CANCER. JRNL REF J. MED. CHEM. V. 62 1837 2019 JRNL REFN ISSN 1520-4804 JRNL PMID 30657313 JRNL DOI 10.1021/ACS.JMEDCHEM.8B01296 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.29 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.500 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 18045 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.890 REMARK 3 FREE R VALUE TEST SET COUNT : 882 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.2891 - 5.2665 0.99 2979 149 0.1811 0.2004 REMARK 3 2 5.2665 - 4.1817 0.99 2914 152 0.1790 0.2582 REMARK 3 3 4.1817 - 3.6535 0.99 2881 144 0.1933 0.2651 REMARK 3 4 3.6535 - 3.3197 0.98 2849 141 0.2166 0.2998 REMARK 3 5 3.3197 - 3.0818 0.96 2841 137 0.2603 0.3696 REMARK 3 6 3.0818 - 2.9002 0.93 2699 159 0.2717 0.3620 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.460 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.180 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 4913 REMARK 3 ANGLE : 1.181 6689 REMARK 3 CHIRALITY : 0.047 770 REMARK 3 PLANARITY : 0.006 857 REMARK 3 DIHEDRAL : 15.344 2942 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6A6K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1300007890. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-MAY-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 5C (4A) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18054 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 3.000 REMARK 200 R MERGE (I) : 0.08300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.5 REMARK 200 DATA REDUNDANCY IN SHELL : 2.40 REMARK 200 R MERGE FOR SHELL (I) : 0.24100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5YSO REMARK 200 REMARK 200 REMARK: THE ENTRY CONTAINS FRIEDEL PAIRS IN I/F_PLUS/MINUS REMARK 200 COLUMNS. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS PH6.5, 16 %(W/V) PEG REMARK 280 10K, 3% METOH, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 52.91400 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.28550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 52.91400 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 39.28550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 221 REMARK 465 LEU A 222 REMARK 465 ASN A 223 REMARK 465 PRO A 224 REMARK 465 GLN A 225 REMARK 465 LEU A 226 REMARK 465 VAL A 227 REMARK 465 GLN A 228 REMARK 465 PRO A 229 REMARK 465 ALA A 230 REMARK 465 LYS A 231 REMARK 465 LYS A 232 REMARK 465 PRO A 233 REMARK 465 TYR A 234 REMARK 465 ALA A 456 REMARK 465 LYS A 457 REMARK 465 VAL A 458 REMARK 465 MET B 221 REMARK 465 LEU B 222 REMARK 465 ASN B 223 REMARK 465 PRO B 224 REMARK 465 GLN B 225 REMARK 465 LEU B 226 REMARK 465 VAL B 227 REMARK 465 GLN B 228 REMARK 465 PRO B 229 REMARK 465 ALA B 230 REMARK 465 LYS B 231 REMARK 465 LYS B 232 REMARK 465 PRO B 233 REMARK 465 ALA B 456 REMARK 465 LYS B 457 REMARK 465 VAL B 458 REMARK 465 MET C 221 REMARK 465 LEU C 222 REMARK 465 ASN C 223 REMARK 465 PRO C 224 REMARK 465 GLN C 225 REMARK 465 LEU C 226 REMARK 465 VAL C 227 REMARK 465 GLN C 228 REMARK 465 PRO C 229 REMARK 465 ALA C 230 REMARK 465 LYS C 231 REMARK 465 LYS C 232 REMARK 465 PRO C 233 REMARK 465 TYR C 234 REMARK 465 ASN C 235 REMARK 465 ILE C 438 REMARK 465 LYS C 439 REMARK 465 LEU C 440 REMARK 465 GLU C 441 REMARK 465 GLY C 442 REMARK 465 LYS C 443 REMARK 465 VAL C 444 REMARK 465 PRO C 445 REMARK 465 MET C 446 REMARK 465 HIS C 447 REMARK 465 LYS C 448 REMARK 465 LEU C 449 REMARK 465 PHE C 450 REMARK 465 LEU C 451 REMARK 465 GLU C 452 REMARK 465 MET C 453 REMARK 465 LEU C 454 REMARK 465 GLU C 455 REMARK 465 ALA C 456 REMARK 465 LYS C 457 REMARK 465 VAL C 458 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 235 CG OD1 ND2 REMARK 470 LYS A 236 CG CD CE NZ REMARK 470 ILE A 237 CG2 CD1 REMARK 470 VAL A 238 CG1 CG2 REMARK 470 SER A 239 OG REMARK 470 LEU A 242 CG CD1 CD2 REMARK 470 VAL A 243 CG1 CG2 REMARK 470 GLU A 247 OE1 REMARK 470 LYS A 248 CG CD CE NZ REMARK 470 ILE A 249 CG2 CD1 REMARK 470 THR A 256 OG1 CG2 REMARK 470 VAL A 257 CG1 REMARK 470 ASP A 261 CG OD1 OD2 REMARK 470 ILE A 262 CG2 CD1 REMARK 470 ASP A 270 OD1 REMARK 470 VAL A 278 CG1 CG2 REMARK 470 ILE A 280 CG2 CD1 REMARK 470 LYS A 284 CE NZ REMARK 470 ILE A 286 CG2 CD1 REMARK 470 SER A 290 OG REMARK 470 THR A 291 OG1 CG2 REMARK 470 LEU A 292 CD1 REMARK 470 SER A 293 OG REMARK 470 LEU A 294 CG CD1 CD2 REMARK 470 GLU A 321 CG CD OE1 OE2 REMARK 470 LYS A 338 CG CD CE NZ REMARK 470 LEU A 339 CD1 CD2 REMARK 470 LEU A 352 CD1 REMARK 470 LYS A 354 CG CD CE NZ REMARK 470 LYS A 355 CD CE NZ REMARK 470 SER A 358 OG REMARK 470 LYS A 360 CG CD CE NZ REMARK 470 LYS A 363 NZ REMARK 470 VAL A 367 CG1 CG2 REMARK 470 GLU A 383 OE1 REMARK 470 VAL A 385 CG1 CG2 REMARK 470 GLU A 386 CG CD OE1 OE2 REMARK 470 VAL A 388 CG1 CG2 REMARK 470 LYS A 390 CG CD CE NZ REMARK 470 LEU A 391 CD1 CD2 REMARK 470 ASP A 393 CG OD1 OD2 REMARK 470 GLU A 397 CG CD OE1 OE2 REMARK 470 GLN A 400 CG CD OE1 NE2 REMARK 470 ASP A 401 CG OD1 OD2 REMARK 470 GLN A 406 CG CD OE1 NE2 REMARK 470 MET A 408 CG SD CE REMARK 470 ARG A 412 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 416 CD CE NZ REMARK 470 THR A 427 OG1 CG2 REMARK 470 SER A 428 OG REMARK 470 LYS A 439 CD CE NZ REMARK 470 GLU A 441 OE1 REMARK 470 LYS A 443 CG CD CE NZ REMARK 470 VAL A 444 CG1 CG2 REMARK 470 LYS A 448 CD CE NZ REMARK 470 LEU A 451 CG CD1 CD2 REMARK 470 GLU A 452 CG CD OE1 OE2 REMARK 470 LYS B 236 CG CD CE NZ REMARK 470 ILE B 237 CG2 CD1 REMARK 470 VAL B 238 CG1 CG2 REMARK 470 GLU B 247 CG CD OE1 OE2 REMARK 470 ILE B 249 CG2 CD1 REMARK 470 THR B 256 OG1 CG2 REMARK 470 ILE B 262 CG1 CD1 REMARK 470 VAL B 278 CG1 CG2 REMARK 470 ILE B 280 CD1 REMARK 470 SER B 290 OG REMARK 470 LEU B 294 CG CD1 CD2 REMARK 470 GLU B 321 CG CD OE1 OE2 REMARK 470 GLU B 334 CG CD OE1 OE2 REMARK 470 ASP B 335 OD1 REMARK 470 GLN B 336 CG CD OE1 NE2 REMARK 470 LYS B 338 CG CD CE NZ REMARK 470 LYS B 354 CG CD CE NZ REMARK 470 LYS B 360 CD CE NZ REMARK 470 THR B 368 OG1 CG2 REMARK 470 LYS B 370 CE NZ REMARK 470 MET B 380 SD CE REMARK 470 VAL B 385 CG1 CG2 REMARK 470 GLU B 386 CG CD OE1 OE2 REMARK 470 LYS B 390 CG CD CE NZ REMARK 470 GLN B 400 OE1 NE2 REMARK 470 MET B 408 CE REMARK 470 LYS B 430 CD CE NZ REMARK 470 GLN B 433 CG CD OE1 NE2 REMARK 470 LYS B 439 CG CD CE NZ REMARK 470 LYS B 443 CG CD CE NZ REMARK 470 VAL B 444 CG1 CG2 REMARK 470 LYS B 448 CG CD CE NZ REMARK 470 LEU B 449 CD1 REMARK 470 LEU B 451 CG CD1 CD2 REMARK 470 GLU B 452 CG CD OE1 OE2 REMARK 470 GLU B 455 CG CD OE1 OE2 REMARK 470 LYS C 236 CG CD CE NZ REMARK 470 VAL C 238 CG1 REMARK 470 SER C 239 OG REMARK 470 LEU C 241 CG CD1 CD2 REMARK 470 LEU C 242 CD1 CD2 REMARK 470 LYS C 248 CG CD CE NZ REMARK 470 ILE C 249 CG1 CG2 CD1 REMARK 470 MET C 252 CE REMARK 470 THR C 256 CG2 REMARK 470 VAL C 257 CG1 CG2 REMARK 470 ASP C 259 CG OD1 OD2 REMARK 470 ASP C 261 OD1 OD2 REMARK 470 ILE C 262 CG2 CD1 REMARK 470 LYS C 263 NZ REMARK 470 LEU C 265 CG CD1 CD2 REMARK 470 LEU C 276 CD1 REMARK 470 VAL C 277 CG1 CG2 REMARK 470 ILE C 280 CG2 CD1 REMARK 470 LYS C 284 CG CD CE NZ REMARK 470 ILE C 286 CG1 CG2 CD1 REMARK 470 SER C 290 OG REMARK 470 THR C 291 OG1 CG2 REMARK 470 SER C 293 OG REMARK 470 LEU C 294 CG CD1 CD2 REMARK 470 MET C 298 CG SD CE REMARK 470 LEU C 300 CD1 CD2 REMARK 470 GLN C 302 CD OE1 NE2 REMARK 470 SER C 319 OG REMARK 470 GLU C 321 OE1 OE2 REMARK 470 ASP C 322 CG OD1 OD2 REMARK 470 GLU C 323 CG CD OE1 OE2 REMARK 470 LEU C 324 CD2 REMARK 470 VAL C 325 CG1 CG2 REMARK 470 ASP C 328 CG OD1 OD2 REMARK 470 ASP C 333 OD1 REMARK 470 GLU C 334 CG CD OE1 OE2 REMARK 470 LYS C 338 CG CD CE NZ REMARK 470 LEU C 339 CG CD1 CD2 REMARK 470 LEU C 343 CD1 CD2 REMARK 470 LEU C 345 CD1 CD2 REMARK 470 LEU C 352 CD1 CD2 REMARK 470 LYS C 354 CG CD CE NZ REMARK 470 LYS C 355 CG CD CE NZ REMARK 470 LYS C 357 NZ REMARK 470 SER C 358 OG REMARK 470 LYS C 360 CG CD CE NZ REMARK 470 LEU C 361 CD1 CD2 REMARK 470 LYS C 363 CG CD CE NZ REMARK 470 SER C 379 OG REMARK 470 VAL C 385 CG1 CG2 REMARK 470 GLU C 386 CG CD OE1 OE2 REMARK 470 GLN C 389 CD OE1 NE2 REMARK 470 LYS C 390 CG CD CE NZ REMARK 470 ASP C 393 CG OD1 OD2 REMARK 470 VAL C 394 CG1 CG2 REMARK 470 GLU C 397 CG CD OE1 OE2 REMARK 470 GLN C 400 CG CD OE1 NE2 REMARK 470 ASP C 401 CG OD1 OD2 REMARK 470 GLN C 406 CG CD OE1 NE2 REMARK 470 MET C 408 CG SD CE REMARK 470 GLU C 409 CG CD OE1 OE2 REMARK 470 LYS C 416 CE NZ REMARK 470 LYS C 430 CG CD CE NZ REMARK 470 GLN C 433 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASN A 346 O28 9S6 A 501 1.97 REMARK 500 OH TYR B 326 O28 9S6 B 501 2.09 REMARK 500 ND2 ASN B 235 OD2 ASP B 401 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 236 -71.68 -65.76 REMARK 500 PRO A 287 97.27 -54.17 REMARK 500 SER A 319 12.44 -69.84 REMARK 500 TYR A 330 107.04 -162.96 REMARK 500 ASP A 384 74.56 -113.56 REMARK 500 LYS A 439 72.50 47.49 REMARK 500 LEU A 454 21.04 -70.39 REMARK 500 ALA B 244 1.18 -69.50 REMARK 500 LYS B 248 130.53 -38.62 REMARK 500 SER B 260 163.90 173.17 REMARK 500 PRO B 287 106.74 -48.06 REMARK 500 ASP B 384 50.66 -109.44 REMARK 500 VAL B 385 -39.65 -35.82 REMARK 500 HIS B 407 47.21 -141.66 REMARK 500 LYS B 439 76.09 59.09 REMARK 500 PRO C 287 102.45 -47.58 REMARK 500 LEU C 292 158.37 -49.10 REMARK 500 LEU C 309 -72.15 -59.67 REMARK 500 ASP C 322 34.48 29.57 REMARK 500 TYR C 330 88.20 -160.37 REMARK 500 MET C 380 30.94 -91.53 REMARK 500 HIS C 407 53.82 -148.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9S6 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9S6 B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9S6 C 501 DBREF 6A6K A 222 458 UNP P62508 ERR3_HUMAN 222 458 DBREF 6A6K B 222 458 UNP P62508 ERR3_HUMAN 222 458 DBREF 6A6K C 222 458 UNP P62508 ERR3_HUMAN 222 458 SEQADV 6A6K MET A 221 UNP P62508 INITIATING METHIONINE SEQADV 6A6K MET B 221 UNP P62508 INITIATING METHIONINE SEQADV 6A6K MET C 221 UNP P62508 INITIATING METHIONINE SEQRES 1 A 238 MET LEU ASN PRO GLN LEU VAL GLN PRO ALA LYS LYS PRO SEQRES 2 A 238 TYR ASN LYS ILE VAL SER HIS LEU LEU VAL ALA GLU PRO SEQRES 3 A 238 GLU LYS ILE TYR ALA MET PRO ASP PRO THR VAL PRO ASP SEQRES 4 A 238 SER ASP ILE LYS ALA LEU THR THR LEU CYS ASP LEU ALA SEQRES 5 A 238 ASP ARG GLU LEU VAL VAL ILE ILE GLY TRP ALA LYS HIS SEQRES 6 A 238 ILE PRO GLY PHE SER THR LEU SER LEU ALA ASP GLN MET SEQRES 7 A 238 SER LEU LEU GLN SER ALA TRP MET GLU ILE LEU ILE LEU SEQRES 8 A 238 GLY VAL VAL TYR ARG SER LEU SER PHE GLU ASP GLU LEU SEQRES 9 A 238 VAL TYR ALA ASP ASP TYR ILE MET ASP GLU ASP GLN SER SEQRES 10 A 238 LYS LEU ALA GLY LEU LEU ASP LEU ASN ASN ALA ILE LEU SEQRES 11 A 238 GLN LEU VAL LYS LYS TYR LYS SER MET LYS LEU GLU LYS SEQRES 12 A 238 GLU GLU PHE VAL THR LEU LYS ALA ILE ALA LEU ALA ASN SEQRES 13 A 238 SER ASP SER MET HIS ILE GLU ASP VAL GLU ALA VAL GLN SEQRES 14 A 238 LYS LEU GLN ASP VAL LEU HIS GLU ALA LEU GLN ASP TYR SEQRES 15 A 238 GLU ALA GLY GLN HIS MET GLU ASP PRO ARG ARG ALA GLY SEQRES 16 A 238 LYS MET LEU MET THR LEU PRO LEU LEU ARG GLN THR SER SEQRES 17 A 238 THR LYS ALA VAL GLN HIS PHE TYR ASN ILE LYS LEU GLU SEQRES 18 A 238 GLY LYS VAL PRO MET HIS LYS LEU PHE LEU GLU MET LEU SEQRES 19 A 238 GLU ALA LYS VAL SEQRES 1 B 238 MET LEU ASN PRO GLN LEU VAL GLN PRO ALA LYS LYS PRO SEQRES 2 B 238 TYR ASN LYS ILE VAL SER HIS LEU LEU VAL ALA GLU PRO SEQRES 3 B 238 GLU LYS ILE TYR ALA MET PRO ASP PRO THR VAL PRO ASP SEQRES 4 B 238 SER ASP ILE LYS ALA LEU THR THR LEU CYS ASP LEU ALA SEQRES 5 B 238 ASP ARG GLU LEU VAL VAL ILE ILE GLY TRP ALA LYS HIS SEQRES 6 B 238 ILE PRO GLY PHE SER THR LEU SER LEU ALA ASP GLN MET SEQRES 7 B 238 SER LEU LEU GLN SER ALA TRP MET GLU ILE LEU ILE LEU SEQRES 8 B 238 GLY VAL VAL TYR ARG SER LEU SER PHE GLU ASP GLU LEU SEQRES 9 B 238 VAL TYR ALA ASP ASP TYR ILE MET ASP GLU ASP GLN SER SEQRES 10 B 238 LYS LEU ALA GLY LEU LEU ASP LEU ASN ASN ALA ILE LEU SEQRES 11 B 238 GLN LEU VAL LYS LYS TYR LYS SER MET LYS LEU GLU LYS SEQRES 12 B 238 GLU GLU PHE VAL THR LEU LYS ALA ILE ALA LEU ALA ASN SEQRES 13 B 238 SER ASP SER MET HIS ILE GLU ASP VAL GLU ALA VAL GLN SEQRES 14 B 238 LYS LEU GLN ASP VAL LEU HIS GLU ALA LEU GLN ASP TYR SEQRES 15 B 238 GLU ALA GLY GLN HIS MET GLU ASP PRO ARG ARG ALA GLY SEQRES 16 B 238 LYS MET LEU MET THR LEU PRO LEU LEU ARG GLN THR SER SEQRES 17 B 238 THR LYS ALA VAL GLN HIS PHE TYR ASN ILE LYS LEU GLU SEQRES 18 B 238 GLY LYS VAL PRO MET HIS LYS LEU PHE LEU GLU MET LEU SEQRES 19 B 238 GLU ALA LYS VAL SEQRES 1 C 238 MET LEU ASN PRO GLN LEU VAL GLN PRO ALA LYS LYS PRO SEQRES 2 C 238 TYR ASN LYS ILE VAL SER HIS LEU LEU VAL ALA GLU PRO SEQRES 3 C 238 GLU LYS ILE TYR ALA MET PRO ASP PRO THR VAL PRO ASP SEQRES 4 C 238 SER ASP ILE LYS ALA LEU THR THR LEU CYS ASP LEU ALA SEQRES 5 C 238 ASP ARG GLU LEU VAL VAL ILE ILE GLY TRP ALA LYS HIS SEQRES 6 C 238 ILE PRO GLY PHE SER THR LEU SER LEU ALA ASP GLN MET SEQRES 7 C 238 SER LEU LEU GLN SER ALA TRP MET GLU ILE LEU ILE LEU SEQRES 8 C 238 GLY VAL VAL TYR ARG SER LEU SER PHE GLU ASP GLU LEU SEQRES 9 C 238 VAL TYR ALA ASP ASP TYR ILE MET ASP GLU ASP GLN SER SEQRES 10 C 238 LYS LEU ALA GLY LEU LEU ASP LEU ASN ASN ALA ILE LEU SEQRES 11 C 238 GLN LEU VAL LYS LYS TYR LYS SER MET LYS LEU GLU LYS SEQRES 12 C 238 GLU GLU PHE VAL THR LEU LYS ALA ILE ALA LEU ALA ASN SEQRES 13 C 238 SER ASP SER MET HIS ILE GLU ASP VAL GLU ALA VAL GLN SEQRES 14 C 238 LYS LEU GLN ASP VAL LEU HIS GLU ALA LEU GLN ASP TYR SEQRES 15 C 238 GLU ALA GLY GLN HIS MET GLU ASP PRO ARG ARG ALA GLY SEQRES 16 C 238 LYS MET LEU MET THR LEU PRO LEU LEU ARG GLN THR SER SEQRES 17 C 238 THR LYS ALA VAL GLN HIS PHE TYR ASN ILE LYS LEU GLU SEQRES 18 C 238 GLY LYS VAL PRO MET HIS LYS LEU PHE LEU GLU MET LEU SEQRES 19 C 238 GLU ALA LYS VAL HET 9S6 A 501 70 HET 9S6 B 501 70 HET 9S6 C 501 70 HETNAM 9S6 3-[(~{E})-5-OXIDANYL-2-PHENYL-1-[4-(4-PROPAN-2- HETNAM 2 9S6 YLPIPERAZIN-1-YL)PHENYL]PENT-1-ENYL]PHENOL FORMUL 4 9S6 3(C30 H36 N2 O2) FORMUL 7 HOH *7(H2 O) HELIX 1 AA1 ASN A 235 ALA A 244 1 10 HELIX 2 AA2 SER A 260 HIS A 285 1 26 HELIX 3 AA3 GLY A 288 LEU A 292 5 5 HELIX 4 AA4 SER A 293 SER A 317 1 25 HELIX 5 AA5 GLU A 334 GLY A 341 1 8 HELIX 6 AA6 LEU A 342 MET A 359 1 18 HELIX 7 AA7 GLU A 362 ASN A 376 1 15 HELIX 8 AA8 ASP A 384 HIS A 407 1 24 HELIX 9 AA9 ARG A 413 ILE A 438 1 26 HELIX 10 AB1 PRO A 445 LEU A 454 1 10 HELIX 11 AB2 ASN B 235 ALA B 244 1 10 HELIX 12 AB3 SER B 260 HIS B 285 1 26 HELIX 13 AB4 SER B 293 LEU B 318 1 26 HELIX 14 AB5 ASP B 333 GLY B 341 1 9 HELIX 15 AB6 LEU B 342 LYS B 360 1 19 HELIX 16 AB7 GLU B 362 ASN B 376 1 15 HELIX 17 AB8 ASP B 384 HIS B 407 1 24 HELIX 18 AB9 ARG B 412 MET B 419 1 8 HELIX 19 AC1 THR B 420 ILE B 438 1 19 HELIX 20 AC2 PRO B 445 GLU B 455 1 11 HELIX 21 AC3 ILE C 237 ALA C 244 1 8 HELIX 22 AC4 SER C 260 LYS C 284 1 25 HELIX 23 AC5 GLY C 288 LEU C 292 5 5 HELIX 24 AC6 SER C 293 SER C 317 1 25 HELIX 25 AC7 GLU C 334 GLY C 341 1 8 HELIX 26 AC8 LEU C 342 LYS C 360 1 19 HELIX 27 AC9 GLU C 362 ASN C 376 1 15 HELIX 28 AD1 ASP C 384 HIS C 407 1 24 HELIX 29 AD2 ARG C 412 MET C 419 1 8 HELIX 30 AD3 THR C 420 ASN C 437 1 18 SHEET 1 AA1 2 GLU A 323 ALA A 327 0 SHEET 2 AA1 2 TYR A 330 ASP A 333 -1 O MET A 332 N LEU A 324 SHEET 1 AA2 2 LEU B 324 ALA B 327 0 SHEET 2 AA2 2 TYR B 330 MET B 332 -1 O TYR B 330 N ALA B 327 SHEET 1 AA3 2 GLU C 323 ALA C 327 0 SHEET 2 AA3 2 TYR C 330 ASP C 333 -1 O MET C 332 N LEU C 324 SITE 1 AC1 14 LEU A 265 CYS A 269 LEU A 271 ALA A 272 SITE 2 AC1 14 ASP A 273 TRP A 305 LEU A 309 VAL A 313 SITE 3 AC1 14 TYR A 326 ASN A 346 HIS A 434 PHE A 435 SITE 4 AC1 14 LEU A 440 LEU A 449 SITE 1 AC2 13 LEU B 271 ALA B 272 ASP B 273 TRP B 305 SITE 2 AC2 13 LEU B 309 VAL B 313 TYR B 326 ASN B 346 SITE 3 AC2 13 ILE B 349 ALA B 431 HIS B 434 PHE B 435 SITE 4 AC2 13 LEU B 440 SITE 1 AC3 10 LEU C 271 ALA C 272 ASP C 273 TRP C 305 SITE 2 AC3 10 LEU C 309 VAL C 313 TYR C 326 ASN C 346 SITE 3 AC3 10 ILE C 349 PHE C 435 CRYST1 105.828 78.571 106.963 90.00 109.19 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009449 0.000000 0.003289 0.00000 SCALE2 0.000000 0.012727 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009899 0.00000