data_6A87 # _entry.id 6A87 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6A87 pdb_00006a87 10.2210/pdb6a87/pdb WWPDB D_1300008322 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6A87 _pdbx_database_status.recvd_initial_deposition_date 2018-07-06 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Yamasaki, K.' 1 ? 'Yamasaki, T.' 2 ? 'Kubota, T.' 3 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Glycobiology _citation.journal_id_ASTM ? _citation.journal_id_CSD 9999 _citation.journal_id_ISSN 1460-2423 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 29 _citation.language ? _citation.page_first 576 _citation.page_last 587 _citation.title 'Structural basis for specific recognition of core fucosylation in N-glycans by Pholiota squarrosa lectin (PhoSL).' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/glycob/cwz025 _citation.pdbx_database_id_PubMed 30913288 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yamasaki, K.' 1 ? primary 'Kubota, T.' 2 ? primary 'Yamasaki, T.' 3 ? primary 'Nagashima, I.' 4 ? primary 'Shimizu, H.' 5 ? primary 'Terada, R.I.' 6 ? primary 'Nishigami, H.' 7 ? primary 'Kang, J.' 8 ? primary 'Tateno, M.' 9 ? primary 'Tateno, H.' 10 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 6A87 _cell.details ? _cell.formula_units_Z ? _cell.length_a 145.778 _cell.length_a_esd ? _cell.length_b 145.778 _cell.length_b_esd ? _cell.length_c 39.531 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 54 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6A87 _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'H 3' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn lectin 4440.958 6 ? ? ? ? 2 branched man 'alpha-L-fucopyranose-(1-6)-2-acetamido-2-deoxy-beta-D-glucopyranose' 367.349 3 ? ? ? ? 3 non-polymer man alpha-L-fucopyranose 164.156 1 ? ? ? ? 4 non-polymer syn METHANETHIOL 48.107 3 ? ? ? ? 5 water nat water 18.015 68 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name PhoSL # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code APVPVTKLVCDGDTYKCTAYLDYGDGKWVAQWDTAVFHTT _entity_poly.pdbx_seq_one_letter_code_can APVPVTKLVCDGDTYKCTAYLDYGDGKWVAQWDTAVFHTT _entity_poly.pdbx_strand_id A,B,C,D,E,F _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 PRO n 1 3 VAL n 1 4 PRO n 1 5 VAL n 1 6 THR n 1 7 LYS n 1 8 LEU n 1 9 VAL n 1 10 CYS n 1 11 ASP n 1 12 GLY n 1 13 ASP n 1 14 THR n 1 15 TYR n 1 16 LYS n 1 17 CYS n 1 18 THR n 1 19 ALA n 1 20 TYR n 1 21 LEU n 1 22 ASP n 1 23 TYR n 1 24 GLY n 1 25 ASP n 1 26 GLY n 1 27 LYS n 1 28 TRP n 1 29 VAL n 1 30 ALA n 1 31 GLN n 1 32 TRP n 1 33 ASP n 1 34 THR n 1 35 ALA n 1 36 VAL n 1 37 PHE n 1 38 HIS n 1 39 THR n 1 40 THR n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 40 _pdbx_entity_src_syn.organism_scientific 'Pholiota squarrosa' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 75321 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6A87 _struct_ref.pdbx_db_accession 6A87 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6A87 A 1 ? 40 ? 6A87 1 ? 40 ? 1 40 2 1 6A87 B 1 ? 40 ? 6A87 1 ? 40 ? 1 40 3 1 6A87 C 1 ? 40 ? 6A87 1 ? 40 ? 1 40 4 1 6A87 D 1 ? 40 ? 6A87 1 ? 40 ? 1 40 5 1 6A87 E 1 ? 40 ? 6A87 1 ? 40 ? 1 40 6 1 6A87 F 1 ? 40 ? 6A87 1 ? 40 ? 1 40 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose 'alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose' 'C6 H12 O5' 164.156 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MEE non-polymer . METHANETHIOL ? 'C H4 S' 48.107 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6A87 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 3.03 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 59.46 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '1.8 M potassium-sodium phosphate, 5% 1,3-butanediol' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 95 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2017-05-09 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-5A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL-5A _diffrn_source.pdbx_synchrotron_site 'Photon Factory' # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6A87 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.4 _reflns.d_resolution_low 50.0 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 11922 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 98.1 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.5 _reflns.pdbx_Rmerge_I_obs 0.086 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 36.7 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.40 _reflns_shell.d_res_low 2.44 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 4.4 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.486 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 0.00 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] -0.01 _refine.B_iso_max ? _refine.B_iso_mean 48.384 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.962 _refine.correlation_coeff_Fo_to_Fc_free 0.938 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6A87 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.41 _refine.ls_d_res_low 30.46 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 11301 _refine.ls_number_reflns_R_free 603 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 97.92 _refine.ls_percent_reflns_R_free 5.1 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.18028 _refine.ls_R_factor_R_free 0.23703 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.17728 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 6A86 _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.353 _refine.pdbx_overall_ESU_R_Free 0.249 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 8.256 _refine.overall_SU_ML 0.186 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 1862 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 89 _refine_hist.number_atoms_solvent 68 _refine_hist.number_atoms_total 2019 _refine_hist.d_res_high 2.41 _refine_hist.d_res_low 30.46 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.011 0.014 2050 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.006 0.017 1778 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.588 1.728 2843 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 0.938 1.731 4133 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 15.425 5.428 257 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 31.554 24.605 76 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 14.093 15.000 257 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.069 0.200 303 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.006 0.020 2407 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 420 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 3.360 4.652 962 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 3.359 4.649 961 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 5.030 6.936 1196 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 5.028 6.941 1197 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 3.918 5.134 1088 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 3.915 5.133 1088 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 5.854 7.550 1640 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 7.916 54.504 2226 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 7.885 54.487 2220 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 2.407 _refine_ls_shell.d_res_low 2.469 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 61 _refine_ls_shell.number_reflns_R_work 848 _refine_ls_shell.percent_reflns_obs 99.34 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.332 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.244 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6A87 _struct.title 'Pholiota squarrosa lectin (PhoSL) in complex with fucose(alpha1-6)GlcNAc' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6A87 _struct_keywords.text 'Lectin, Trimer, Fucose, SUGAR BINDING PROTEIN' _struct_keywords.pdbx_keywords 'SUGAR BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 1 ? G N N 2 ? H N N 2 ? I N N 2 ? J N N 3 ? K N N 4 ? L N N 4 ? M N N 4 ? N N N 5 ? O N N 5 ? P N N 5 ? Q N N 5 ? R N N 5 ? S N N 5 ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 10 SG A ? ? 1_555 A CYS 17 SG A ? A CYS 10 A CYS 17 1_555 ? ? ? ? ? ? ? 2.042 ? ? disulf2 disulf ? ? E CYS 10 SG B ? ? 1_555 E CYS 17 SG B ? E CYS 10 E CYS 17 1_555 ? ? ? ? ? ? ? 2.056 ? ? disulf3 disulf ? ? F CYS 10 SG A ? ? 1_555 F CYS 17 SG A ? F CYS 10 F CYS 17 1_555 ? ? ? ? ? ? ? 2.036 ? ? disulf4 disulf ? ? F CYS 10 SG B ? ? 1_555 F CYS 17 SG B ? F CYS 10 F CYS 17 1_555 ? ? ? ? ? ? ? 2.036 ? ? covale1 covale one ? K MEE . S ? ? ? 1_555 H NAG . C1 ? ? E MEE 101 H NAG 1 1_555 ? ? ? ? ? ? ? 1.846 ? ? covale2 covale one ? L MEE . S ? ? ? 1_555 I NAG . C1 ? ? E MEE 104 I NAG 1 1_555 ? ? ? ? ? ? ? 1.843 ? ? covale3 covale one ? M MEE . S ? ? ? 1_555 G NAG . C1 ? ? F MEE 103 G NAG 1 1_555 ? ? ? ? ? ? ? 1.821 ? ? covale4 covale both ? G NAG . O6 ? ? ? 1_555 G FUC . C1 ? ? G NAG 1 G FUC 2 1_555 ? ? ? ? ? ? ? 1.444 ? ? covale5 covale both ? H NAG . O6 ? ? ? 1_555 H FUC . C1 ? ? H NAG 1 H FUC 2 1_555 ? ? ? ? ? ? ? 1.448 ? ? covale6 covale both ? I NAG . O6 ? ? ? 1_555 I FUC . C1 ? ? I NAG 1 I FUC 2 1_555 ? ? ? ? ? ? ? 1.436 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 8 ? AA2 ? 8 ? AA3 ? 8 ? AA4 ? 4 ? AA5 ? 8 ? AA6 ? 8 ? AA7 ? 8 ? AA8 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA1 7 8 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel AA2 5 6 ? anti-parallel AA2 6 7 ? anti-parallel AA2 7 8 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA3 4 5 ? anti-parallel AA3 5 6 ? anti-parallel AA3 6 7 ? anti-parallel AA3 7 8 ? anti-parallel AA4 1 2 ? anti-parallel AA4 3 4 ? anti-parallel AA5 1 2 ? anti-parallel AA5 2 3 ? anti-parallel AA5 3 4 ? anti-parallel AA5 4 5 ? anti-parallel AA5 5 6 ? anti-parallel AA5 6 7 ? anti-parallel AA5 7 8 ? anti-parallel AA6 1 2 ? anti-parallel AA6 2 3 ? anti-parallel AA6 3 4 ? anti-parallel AA6 4 5 ? anti-parallel AA6 5 6 ? anti-parallel AA6 6 7 ? anti-parallel AA6 7 8 ? anti-parallel AA7 1 2 ? anti-parallel AA7 2 3 ? anti-parallel AA7 3 4 ? anti-parallel AA7 4 5 ? anti-parallel AA7 5 6 ? anti-parallel AA7 6 7 ? anti-parallel AA7 7 8 ? anti-parallel AA8 1 2 ? anti-parallel AA8 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ALA A 35 ? HIS A 38 ? ALA A 35 HIS A 38 AA1 2 TRP C 28 ? ASP C 33 ? TRP C 28 ASP C 33 AA1 3 LYS C 16 ? LEU C 21 ? LYS C 16 LEU C 21 AA1 4 PRO C 2 ? ASP C 11 ? PRO C 2 ASP C 11 AA1 5 PRO A 2 ? ASP A 11 ? PRO A 2 ASP A 11 AA1 6 LYS A 16 ? LEU A 21 ? LYS A 16 LEU A 21 AA1 7 TRP A 28 ? ASP A 33 ? TRP A 28 ASP A 33 AA1 8 ALA B 35 ? HIS B 38 ? ALA B 35 HIS B 38 AA2 1 ALA A 35 ? HIS A 38 ? ALA A 35 HIS A 38 AA2 2 TRP C 28 ? ASP C 33 ? TRP C 28 ASP C 33 AA2 3 LYS C 16 ? LEU C 21 ? LYS C 16 LEU C 21 AA2 4 PRO C 2 ? ASP C 11 ? PRO C 2 ASP C 11 AA2 5 PRO B 2 ? ASP B 11 ? PRO B 2 ASP B 11 AA2 6 LYS B 16 ? LEU B 21 ? LYS B 16 LEU B 21 AA2 7 TRP B 28 ? ASP B 33 ? TRP B 28 ASP B 33 AA2 8 ALA C 35 ? HIS C 38 ? ALA C 35 HIS C 38 AA3 1 ALA C 35 ? HIS C 38 ? ALA C 35 HIS C 38 AA3 2 TRP B 28 ? ASP B 33 ? TRP B 28 ASP B 33 AA3 3 LYS B 16 ? LEU B 21 ? LYS B 16 LEU B 21 AA3 4 PRO B 2 ? ASP B 11 ? PRO B 2 ASP B 11 AA3 5 PRO A 2 ? ASP A 11 ? PRO A 2 ASP A 11 AA3 6 LYS A 16 ? LEU A 21 ? LYS A 16 LEU A 21 AA3 7 TRP A 28 ? ASP A 33 ? TRP A 28 ASP A 33 AA3 8 ALA B 35 ? HIS B 38 ? ALA B 35 HIS B 38 AA4 1 ALA B 35 ? HIS B 38 ? ALA B 35 HIS B 38 AA4 2 TRP A 28 ? ASP A 33 ? TRP A 28 ASP A 33 AA4 3 TRP B 28 ? ASP B 33 ? TRP B 28 ASP B 33 AA4 4 ALA C 35 ? HIS C 38 ? ALA C 35 HIS C 38 AA5 1 ALA D 35 ? HIS D 38 ? ALA D 35 HIS D 38 AA5 2 TRP F 28 ? ASP F 33 ? TRP F 28 ASP F 33 AA5 3 LYS F 16 ? LEU F 21 ? LYS F 16 LEU F 21 AA5 4 PRO F 2 ? ASP F 11 ? PRO F 2 ASP F 11 AA5 5 VAL D 3 ? ASP D 11 ? VAL D 3 ASP D 11 AA5 6 LYS D 16 ? LEU D 21 ? LYS D 16 LEU D 21 AA5 7 TRP D 28 ? ASP D 33 ? TRP D 28 ASP D 33 AA5 8 ALA E 35 ? HIS E 38 ? ALA E 35 HIS E 38 AA6 1 ALA D 35 ? HIS D 38 ? ALA D 35 HIS D 38 AA6 2 TRP F 28 ? ASP F 33 ? TRP F 28 ASP F 33 AA6 3 LYS F 16 ? LEU F 21 ? LYS F 16 LEU F 21 AA6 4 PRO F 2 ? ASP F 11 ? PRO F 2 ASP F 11 AA6 5 VAL E 3 ? ASP E 11 ? VAL E 3 ASP E 11 AA6 6 LYS E 16 ? LEU E 21 ? LYS E 16 LEU E 21 AA6 7 TRP E 28 ? ASP E 33 ? TRP E 28 ASP E 33 AA6 8 ALA F 35 ? HIS F 38 ? ALA F 35 HIS F 38 AA7 1 ALA F 35 ? HIS F 38 ? ALA F 35 HIS F 38 AA7 2 TRP E 28 ? ASP E 33 ? TRP E 28 ASP E 33 AA7 3 LYS E 16 ? LEU E 21 ? LYS E 16 LEU E 21 AA7 4 VAL E 3 ? ASP E 11 ? VAL E 3 ASP E 11 AA7 5 VAL D 3 ? ASP D 11 ? VAL D 3 ASP D 11 AA7 6 LYS D 16 ? LEU D 21 ? LYS D 16 LEU D 21 AA7 7 TRP D 28 ? ASP D 33 ? TRP D 28 ASP D 33 AA7 8 ALA E 35 ? HIS E 38 ? ALA E 35 HIS E 38 AA8 1 ALA E 35 ? HIS E 38 ? ALA E 35 HIS E 38 AA8 2 TRP D 28 ? ASP D 33 ? TRP D 28 ASP D 33 AA8 3 TRP E 28 ? ASP E 33 ? TRP E 28 ASP E 33 AA8 4 ALA F 35 ? HIS F 38 ? ALA F 35 HIS F 38 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ALA A 35 ? N ALA A 35 O GLN C 31 ? O GLN C 31 AA1 2 3 O ALA C 30 ? O ALA C 30 N ALA C 19 ? N ALA C 19 AA1 3 4 O THR C 18 ? O THR C 18 N VAL C 9 ? N VAL C 9 AA1 4 5 O VAL C 5 ? O VAL C 5 N LEU A 8 ? N LEU A 8 AA1 5 6 N VAL A 9 ? N VAL A 9 O THR A 18 ? O THR A 18 AA1 6 7 N ALA A 19 ? N ALA A 19 O ALA A 30 ? O ALA A 30 AA1 7 8 N GLN A 31 ? N GLN A 31 O ALA B 35 ? O ALA B 35 AA2 1 2 N ALA A 35 ? N ALA A 35 O GLN C 31 ? O GLN C 31 AA2 2 3 O ALA C 30 ? O ALA C 30 N ALA C 19 ? N ALA C 19 AA2 3 4 O THR C 18 ? O THR C 18 N VAL C 9 ? N VAL C 9 AA2 4 5 O CYS C 10 ? O CYS C 10 N VAL B 3 ? N VAL B 3 AA2 5 6 N ASP B 11 ? N ASP B 11 O LYS B 16 ? O LYS B 16 AA2 6 7 N CYS B 17 ? N CYS B 17 O TRP B 32 ? O TRP B 32 AA2 7 8 N VAL B 29 ? N VAL B 29 O PHE C 37 ? O PHE C 37 AA3 1 2 O PHE C 37 ? O PHE C 37 N VAL B 29 ? N VAL B 29 AA3 2 3 O TRP B 32 ? O TRP B 32 N CYS B 17 ? N CYS B 17 AA3 3 4 O LYS B 16 ? O LYS B 16 N ASP B 11 ? N ASP B 11 AA3 4 5 O CYS B 10 ? O CYS B 10 N VAL A 3 ? N VAL A 3 AA3 5 6 N VAL A 9 ? N VAL A 9 O THR A 18 ? O THR A 18 AA3 6 7 N ALA A 19 ? N ALA A 19 O ALA A 30 ? O ALA A 30 AA3 7 8 N GLN A 31 ? N GLN A 31 O ALA B 35 ? O ALA B 35 AA4 1 2 O ALA B 35 ? O ALA B 35 N GLN A 31 ? N GLN A 31 AA4 3 4 N VAL B 29 ? N VAL B 29 O PHE C 37 ? O PHE C 37 AA5 1 2 N PHE D 37 ? N PHE D 37 O VAL F 29 ? O VAL F 29 AA5 2 3 O ALA F 30 ? O ALA F 30 N ALA F 19 ? N ALA F 19 AA5 3 4 O TYR F 20 ? O TYR F 20 N THR F 6 ? N THR F 6 AA5 4 5 O VAL F 3 ? O VAL F 3 N CYS D 10 ? N CYS D 10 AA5 5 6 N LYS D 7 ? N LYS D 7 O TYR D 20 ? O TYR D 20 AA5 6 7 N CYS D 17 ? N CYS D 17 O TRP D 32 ? O TRP D 32 AA5 7 8 N GLN D 31 ? N GLN D 31 O ALA E 35 ? O ALA E 35 AA6 1 2 N PHE D 37 ? N PHE D 37 O VAL F 29 ? O VAL F 29 AA6 2 3 O ALA F 30 ? O ALA F 30 N ALA F 19 ? N ALA F 19 AA6 3 4 O TYR F 20 ? O TYR F 20 N THR F 6 ? N THR F 6 AA6 4 5 O CYS F 10 ? O CYS F 10 N VAL E 3 ? N VAL E 3 AA6 5 6 N THR E 6 ? N THR E 6 O TYR E 20 ? O TYR E 20 AA6 6 7 N ALA E 19 ? N ALA E 19 O ALA E 30 ? O ALA E 30 AA6 7 8 N VAL E 29 ? N VAL E 29 O PHE F 37 ? O PHE F 37 AA7 1 2 O PHE F 37 ? O PHE F 37 N VAL E 29 ? N VAL E 29 AA7 2 3 O ALA E 30 ? O ALA E 30 N ALA E 19 ? N ALA E 19 AA7 3 4 O TYR E 20 ? O TYR E 20 N THR E 6 ? N THR E 6 AA7 4 5 O CYS E 10 ? O CYS E 10 N VAL D 3 ? N VAL D 3 AA7 5 6 N LYS D 7 ? N LYS D 7 O TYR D 20 ? O TYR D 20 AA7 6 7 N CYS D 17 ? N CYS D 17 O TRP D 32 ? O TRP D 32 AA7 7 8 N GLN D 31 ? N GLN D 31 O ALA E 35 ? O ALA E 35 AA8 1 2 O ALA E 35 ? O ALA E 35 N GLN D 31 ? N GLN D 31 AA8 3 4 N VAL E 29 ? N VAL E 29 O PHE F 37 ? O PHE F 37 # _atom_sites.entry_id 6A87 _atom_sites.fract_transf_matrix[1][1] 0.006860 _atom_sites.fract_transf_matrix[1][2] 0.003960 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.007921 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.025297 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 1 1 ALA ALA A . n A 1 2 PRO 2 2 2 PRO PRO A . n A 1 3 VAL 3 3 3 VAL VAL A . n A 1 4 PRO 4 4 4 PRO PRO A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 THR 6 6 6 THR THR A . n A 1 7 LYS 7 7 7 LYS LYS A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 VAL 9 9 9 VAL VAL A . n A 1 10 CYS 10 10 10 CYS CYS A . n A 1 11 ASP 11 11 11 ASP ASP A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 ASP 13 13 13 ASP ASP A . n A 1 14 THR 14 14 14 THR THR A . n A 1 15 TYR 15 15 15 TYR TYR A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 CYS 17 17 17 CYS CYS A . n A 1 18 THR 18 18 18 THR THR A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 TYR 20 20 20 TYR TYR A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 ASP 22 22 22 ASP ASP A . n A 1 23 TYR 23 23 23 TYR TYR A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 TRP 28 28 28 TRP TRP A . n A 1 29 VAL 29 29 29 VAL VAL A . n A 1 30 ALA 30 30 30 ALA ALA A . n A 1 31 GLN 31 31 31 GLN GLN A . n A 1 32 TRP 32 32 32 TRP TRP A . n A 1 33 ASP 33 33 33 ASP ASP A . n A 1 34 THR 34 34 34 THR THR A . n A 1 35 ALA 35 35 35 ALA ALA A . n A 1 36 VAL 36 36 36 VAL VAL A . n A 1 37 PHE 37 37 37 PHE PHE A . n A 1 38 HIS 38 38 38 HIS HIS A . n A 1 39 THR 39 39 39 THR THR A . n A 1 40 THR 40 40 40 THR THR A . n B 1 1 ALA 1 1 1 ALA ALA B . n B 1 2 PRO 2 2 2 PRO PRO B . n B 1 3 VAL 3 3 3 VAL VAL B . n B 1 4 PRO 4 4 4 PRO PRO B . n B 1 5 VAL 5 5 5 VAL VAL B . n B 1 6 THR 6 6 6 THR THR B . n B 1 7 LYS 7 7 7 LYS LYS B . n B 1 8 LEU 8 8 8 LEU LEU B . n B 1 9 VAL 9 9 9 VAL VAL B . n B 1 10 CYS 10 10 10 CYS CYS B . n B 1 11 ASP 11 11 11 ASP ASP B . n B 1 12 GLY 12 12 12 GLY GLY B . n B 1 13 ASP 13 13 13 ASP ASP B . n B 1 14 THR 14 14 14 THR THR B . n B 1 15 TYR 15 15 15 TYR TYR B . n B 1 16 LYS 16 16 16 LYS LYS B . n B 1 17 CYS 17 17 17 CYS CYS B . n B 1 18 THR 18 18 18 THR THR B . n B 1 19 ALA 19 19 19 ALA ALA B . n B 1 20 TYR 20 20 20 TYR TYR B . n B 1 21 LEU 21 21 21 LEU LEU B . n B 1 22 ASP 22 22 22 ASP ASP B . n B 1 23 TYR 23 23 23 TYR TYR B . n B 1 24 GLY 24 24 24 GLY GLY B . n B 1 25 ASP 25 25 25 ASP ASP B . n B 1 26 GLY 26 26 26 GLY GLY B . n B 1 27 LYS 27 27 27 LYS LYS B . n B 1 28 TRP 28 28 28 TRP TRP B . n B 1 29 VAL 29 29 29 VAL VAL B . n B 1 30 ALA 30 30 30 ALA ALA B . n B 1 31 GLN 31 31 31 GLN GLN B . n B 1 32 TRP 32 32 32 TRP TRP B . n B 1 33 ASP 33 33 33 ASP ASP B . n B 1 34 THR 34 34 34 THR THR B . n B 1 35 ALA 35 35 35 ALA ALA B . n B 1 36 VAL 36 36 36 VAL VAL B . n B 1 37 PHE 37 37 37 PHE PHE B . n B 1 38 HIS 38 38 38 HIS HIS B . n B 1 39 THR 39 39 39 THR THR B . n B 1 40 THR 40 40 40 THR THR B . n C 1 1 ALA 1 1 1 ALA ALA C . n C 1 2 PRO 2 2 2 PRO PRO C . n C 1 3 VAL 3 3 3 VAL VAL C . n C 1 4 PRO 4 4 4 PRO PRO C . n C 1 5 VAL 5 5 5 VAL VAL C . n C 1 6 THR 6 6 6 THR THR C . n C 1 7 LYS 7 7 7 LYS LYS C . n C 1 8 LEU 8 8 8 LEU LEU C . n C 1 9 VAL 9 9 9 VAL VAL C . n C 1 10 CYS 10 10 10 CYS CYS C . n C 1 11 ASP 11 11 11 ASP ASP C . n C 1 12 GLY 12 12 12 GLY GLY C . n C 1 13 ASP 13 13 13 ASP ASP C . n C 1 14 THR 14 14 14 THR THR C . n C 1 15 TYR 15 15 15 TYR TYR C . n C 1 16 LYS 16 16 16 LYS LYS C . n C 1 17 CYS 17 17 17 CYS CYS C . n C 1 18 THR 18 18 18 THR THR C . n C 1 19 ALA 19 19 19 ALA ALA C . n C 1 20 TYR 20 20 20 TYR TYR C . n C 1 21 LEU 21 21 21 LEU LEU C . n C 1 22 ASP 22 22 22 ASP ASP C . n C 1 23 TYR 23 23 23 TYR TYR C . n C 1 24 GLY 24 24 24 GLY GLY C . n C 1 25 ASP 25 25 25 ASP ASP C . n C 1 26 GLY 26 26 26 GLY GLY C . n C 1 27 LYS 27 27 27 LYS LYS C . n C 1 28 TRP 28 28 28 TRP TRP C . n C 1 29 VAL 29 29 29 VAL VAL C . n C 1 30 ALA 30 30 30 ALA ALA C . n C 1 31 GLN 31 31 31 GLN GLN C . n C 1 32 TRP 32 32 32 TRP TRP C . n C 1 33 ASP 33 33 33 ASP ASP C . n C 1 34 THR 34 34 34 THR THR C . n C 1 35 ALA 35 35 35 ALA ALA C . n C 1 36 VAL 36 36 36 VAL VAL C . n C 1 37 PHE 37 37 37 PHE PHE C . n C 1 38 HIS 38 38 38 HIS HIS C . n C 1 39 THR 39 39 39 THR THR C . n C 1 40 THR 40 40 40 THR THR C . n D 1 1 ALA 1 1 1 ALA ALA D . n D 1 2 PRO 2 2 2 PRO PRO D . n D 1 3 VAL 3 3 3 VAL VAL D . n D 1 4 PRO 4 4 4 PRO PRO D . n D 1 5 VAL 5 5 5 VAL VAL D . n D 1 6 THR 6 6 6 THR THR D . n D 1 7 LYS 7 7 7 LYS LYS D . n D 1 8 LEU 8 8 8 LEU LEU D . n D 1 9 VAL 9 9 9 VAL VAL D . n D 1 10 CYS 10 10 10 CYS CYS D . n D 1 11 ASP 11 11 11 ASP ASP D . n D 1 12 GLY 12 12 12 GLY GLY D . n D 1 13 ASP 13 13 13 ASP ASP D . n D 1 14 THR 14 14 14 THR THR D . n D 1 15 TYR 15 15 15 TYR TYR D . n D 1 16 LYS 16 16 16 LYS LYS D . n D 1 17 CYS 17 17 17 CYS CYS D . n D 1 18 THR 18 18 18 THR THR D . n D 1 19 ALA 19 19 19 ALA ALA D . n D 1 20 TYR 20 20 20 TYR TYR D . n D 1 21 LEU 21 21 21 LEU LEU D . n D 1 22 ASP 22 22 22 ASP ASP D . n D 1 23 TYR 23 23 23 TYR TYR D . n D 1 24 GLY 24 24 24 GLY GLY D . n D 1 25 ASP 25 25 25 ASP ASP D . n D 1 26 GLY 26 26 26 GLY GLY D . n D 1 27 LYS 27 27 27 LYS LYS D . n D 1 28 TRP 28 28 28 TRP TRP D . n D 1 29 VAL 29 29 29 VAL VAL D . n D 1 30 ALA 30 30 30 ALA ALA D . n D 1 31 GLN 31 31 31 GLN GLN D . n D 1 32 TRP 32 32 32 TRP TRP D . n D 1 33 ASP 33 33 33 ASP ASP D . n D 1 34 THR 34 34 34 THR THR D . n D 1 35 ALA 35 35 35 ALA ALA D . n D 1 36 VAL 36 36 36 VAL VAL D . n D 1 37 PHE 37 37 37 PHE PHE D . n D 1 38 HIS 38 38 38 HIS HIS D . n D 1 39 THR 39 39 39 THR THR D . n D 1 40 THR 40 40 ? ? ? D . n E 1 1 ALA 1 1 1 ALA ALA E . n E 1 2 PRO 2 2 2 PRO PRO E . n E 1 3 VAL 3 3 3 VAL VAL E . n E 1 4 PRO 4 4 4 PRO PRO E . n E 1 5 VAL 5 5 5 VAL VAL E . n E 1 6 THR 6 6 6 THR THR E . n E 1 7 LYS 7 7 7 LYS LYS E . n E 1 8 LEU 8 8 8 LEU LEU E . n E 1 9 VAL 9 9 9 VAL VAL E . n E 1 10 CYS 10 10 10 CYS CYS E . n E 1 11 ASP 11 11 11 ASP ASP E . n E 1 12 GLY 12 12 12 GLY GLY E . n E 1 13 ASP 13 13 13 ASP ASP E . n E 1 14 THR 14 14 14 THR THR E . n E 1 15 TYR 15 15 15 TYR TYR E . n E 1 16 LYS 16 16 16 LYS LYS E . n E 1 17 CYS 17 17 17 CYS CYS E . n E 1 18 THR 18 18 18 THR THR E . n E 1 19 ALA 19 19 19 ALA ALA E . n E 1 20 TYR 20 20 20 TYR TYR E . n E 1 21 LEU 21 21 21 LEU LEU E . n E 1 22 ASP 22 22 22 ASP ASP E . n E 1 23 TYR 23 23 23 TYR TYR E . n E 1 24 GLY 24 24 24 GLY GLY E . n E 1 25 ASP 25 25 25 ASP ASP E . n E 1 26 GLY 26 26 26 GLY GLY E . n E 1 27 LYS 27 27 27 LYS LYS E . n E 1 28 TRP 28 28 28 TRP TRP E . n E 1 29 VAL 29 29 29 VAL VAL E . n E 1 30 ALA 30 30 30 ALA ALA E . n E 1 31 GLN 31 31 31 GLN GLN E . n E 1 32 TRP 32 32 32 TRP TRP E . n E 1 33 ASP 33 33 33 ASP ASP E . n E 1 34 THR 34 34 34 THR THR E . n E 1 35 ALA 35 35 35 ALA ALA E . n E 1 36 VAL 36 36 36 VAL VAL E . n E 1 37 PHE 37 37 37 PHE PHE E . n E 1 38 HIS 38 38 38 HIS HIS E . n E 1 39 THR 39 39 39 THR THR E . n E 1 40 THR 40 40 40 THR THR E . n F 1 1 ALA 1 1 1 ALA ALA F . n F 1 2 PRO 2 2 2 PRO PRO F . n F 1 3 VAL 3 3 3 VAL VAL F . n F 1 4 PRO 4 4 4 PRO PRO F . n F 1 5 VAL 5 5 5 VAL VAL F . n F 1 6 THR 6 6 6 THR THR F . n F 1 7 LYS 7 7 7 LYS LYS F . n F 1 8 LEU 8 8 8 LEU LEU F . n F 1 9 VAL 9 9 9 VAL VAL F . n F 1 10 CYS 10 10 10 CYS CYS F . n F 1 11 ASP 11 11 11 ASP ASP F . n F 1 12 GLY 12 12 12 GLY GLY F . n F 1 13 ASP 13 13 13 ASP ASP F . n F 1 14 THR 14 14 14 THR THR F . n F 1 15 TYR 15 15 15 TYR TYR F . n F 1 16 LYS 16 16 16 LYS LYS F . n F 1 17 CYS 17 17 17 CYS CYS F . n F 1 18 THR 18 18 18 THR THR F . n F 1 19 ALA 19 19 19 ALA ALA F . n F 1 20 TYR 20 20 20 TYR TYR F . n F 1 21 LEU 21 21 21 LEU LEU F . n F 1 22 ASP 22 22 22 ASP ASP F . n F 1 23 TYR 23 23 23 TYR TYR F . n F 1 24 GLY 24 24 24 GLY GLY F . n F 1 25 ASP 25 25 25 ASP ASP F . n F 1 26 GLY 26 26 26 GLY GLY F . n F 1 27 LYS 27 27 27 LYS LYS F . n F 1 28 TRP 28 28 28 TRP TRP F . n F 1 29 VAL 29 29 29 VAL VAL F . n F 1 30 ALA 30 30 30 ALA ALA F . n F 1 31 GLN 31 31 31 GLN GLN F . n F 1 32 TRP 32 32 32 TRP TRP F . n F 1 33 ASP 33 33 33 ASP ASP F . n F 1 34 THR 34 34 34 THR THR F . n F 1 35 ALA 35 35 35 ALA ALA F . n F 1 36 VAL 36 36 36 VAL VAL F . n F 1 37 PHE 37 37 37 PHE PHE F . n F 1 38 HIS 38 38 38 HIS HIS F . n F 1 39 THR 39 39 39 THR THR F . n F 1 40 THR 40 40 ? ? ? F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code J 3 FUC 1 101 102 FUC FUC A . K 4 MEE 1 101 100 MEE MEE E . L 4 MEE 1 104 100 MEE MEE E . M 4 MEE 1 103 100 MEE MEE F . N 5 HOH 1 201 14 HOH HOH A . N 5 HOH 2 202 11 HOH HOH A . N 5 HOH 3 203 4 HOH HOH A . N 5 HOH 4 204 15 HOH HOH A . N 5 HOH 5 205 9 HOH HOH A . N 5 HOH 6 206 23 HOH HOH A . N 5 HOH 7 207 15 HOH HOH A . N 5 HOH 8 208 25 HOH HOH A . N 5 HOH 9 209 28 HOH HOH A . N 5 HOH 10 210 32 HOH HOH A . N 5 HOH 11 211 60 HOH HOH A . N 5 HOH 12 212 24 HOH HOH A . O 5 HOH 1 101 6 HOH HOH B . O 5 HOH 2 102 4 HOH HOH B . O 5 HOH 3 103 32 HOH HOH B . O 5 HOH 4 104 40 HOH HOH B . O 5 HOH 5 105 20 HOH HOH B . O 5 HOH 6 106 65 HOH HOH B . O 5 HOH 7 107 13 HOH HOH B . O 5 HOH 8 108 44 HOH HOH B . O 5 HOH 9 109 7 HOH HOH B . O 5 HOH 10 110 17 HOH HOH B . O 5 HOH 11 111 20 HOH HOH B . O 5 HOH 12 112 14 HOH HOH B . O 5 HOH 13 113 72 HOH HOH B . P 5 HOH 1 101 38 HOH HOH C . P 5 HOH 2 102 46 HOH HOH C . P 5 HOH 3 103 11 HOH HOH C . P 5 HOH 4 104 50 HOH HOH C . P 5 HOH 5 105 24 HOH HOH C . P 5 HOH 6 106 80 HOH HOH C . Q 5 HOH 1 201 33 HOH HOH D . Q 5 HOH 2 202 5 HOH HOH D . Q 5 HOH 3 203 22 HOH HOH D . Q 5 HOH 4 204 40 HOH HOH D . Q 5 HOH 5 205 21 HOH HOH D . Q 5 HOH 6 206 10 HOH HOH D . Q 5 HOH 7 207 8 HOH HOH D . Q 5 HOH 8 208 24 HOH HOH D . Q 5 HOH 9 209 1 HOH HOH D . Q 5 HOH 10 210 18 HOH HOH D . Q 5 HOH 11 211 14 HOH HOH D . Q 5 HOH 12 212 2 HOH HOH D . Q 5 HOH 13 213 48 HOH HOH D . Q 5 HOH 14 214 25 HOH HOH D . Q 5 HOH 15 215 35 HOH HOH D . Q 5 HOH 16 216 38 HOH HOH D . Q 5 HOH 17 217 7 HOH HOH D . R 5 HOH 1 201 8 HOH HOH E . R 5 HOH 2 202 12 HOH HOH E . R 5 HOH 3 203 22 HOH HOH E . R 5 HOH 4 204 22 HOH HOH E . R 5 HOH 5 205 5 HOH HOH E . R 5 HOH 6 206 10 HOH HOH E . R 5 HOH 7 207 54 HOH HOH E . R 5 HOH 8 208 27 HOH HOH E . R 5 HOH 9 209 16 HOH HOH E . R 5 HOH 10 210 31 HOH HOH E . R 5 HOH 11 211 51 HOH HOH E . R 5 HOH 12 212 47 HOH HOH E . S 5 HOH 1 201 36 HOH HOH F . S 5 HOH 2 202 30 HOH HOH F . S 5 HOH 3 203 1 HOH HOH F . S 5 HOH 4 204 19 HOH HOH F . S 5 HOH 5 205 34 HOH HOH F . S 5 HOH 6 206 33 HOH HOH F . S 5 HOH 7 207 53 HOH HOH F . S 5 HOH 8 208 37 HOH HOH F . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? trimeric 3 2 author_defined_assembly ? trimeric 3 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,J,N,O,P 2 1 D,E,F,G,H,I,K,L,M,Q,R,S # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-04-10 2 'Structure model' 1 1 2019-07-03 3 'Structure model' 2 0 2020-07-29 4 'Structure model' 2 1 2023-11-22 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Atomic model' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Derived calculations' 6 3 'Structure model' 'Structure summary' 7 4 'Structure model' 'Data collection' 8 4 'Structure model' 'Database references' 9 4 'Structure model' 'Derived calculations' 10 4 'Structure model' 'Refinement description' 11 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' atom_site 4 3 'Structure model' chem_comp 5 3 'Structure model' entity 6 3 'Structure model' pdbx_branch_scheme 7 3 'Structure model' pdbx_chem_comp_identifier 8 3 'Structure model' pdbx_entity_branch 9 3 'Structure model' pdbx_entity_branch_descriptor 10 3 'Structure model' pdbx_entity_branch_link 11 3 'Structure model' pdbx_entity_branch_list 12 3 'Structure model' pdbx_entity_nonpoly 13 3 'Structure model' pdbx_nonpoly_scheme 14 3 'Structure model' pdbx_struct_assembly_gen 15 3 'Structure model' struct_asym 16 3 'Structure model' struct_conn 17 3 'Structure model' struct_site 18 3 'Structure model' struct_site_gen 19 4 'Structure model' chem_comp 20 4 'Structure model' chem_comp_atom 21 4 'Structure model' chem_comp_bond 22 4 'Structure model' database_2 23 4 'Structure model' pdbx_initial_refinement_model 24 4 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation_author.name' 5 3 'Structure model' '_atom_site.B_iso_or_equiv' 6 3 'Structure model' '_atom_site.Cartn_x' 7 3 'Structure model' '_atom_site.Cartn_y' 8 3 'Structure model' '_atom_site.Cartn_z' 9 3 'Structure model' '_atom_site.auth_asym_id' 10 3 'Structure model' '_atom_site.auth_atom_id' 11 3 'Structure model' '_atom_site.auth_comp_id' 12 3 'Structure model' '_atom_site.auth_seq_id' 13 3 'Structure model' '_atom_site.label_asym_id' 14 3 'Structure model' '_atom_site.label_atom_id' 15 3 'Structure model' '_atom_site.label_comp_id' 16 3 'Structure model' '_atom_site.label_entity_id' 17 3 'Structure model' '_atom_site.type_symbol' 18 3 'Structure model' '_chem_comp.name' 19 3 'Structure model' '_chem_comp.type' 20 3 'Structure model' '_entity.formula_weight' 21 3 'Structure model' '_entity.pdbx_description' 22 3 'Structure model' '_entity.pdbx_number_of_molecules' 23 3 'Structure model' '_entity.type' 24 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 25 3 'Structure model' '_struct_conn.pdbx_dist_value' 26 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 27 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 28 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 29 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 30 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 31 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 32 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 33 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 34 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 35 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 36 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 37 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 38 4 'Structure model' '_chem_comp.pdbx_synonyms' 39 4 'Structure model' '_database_2.pdbx_DOI' 40 4 'Structure model' '_database_2.pdbx_database_accession' 41 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0230 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id TYR _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 23 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -170.60 _pdbx_validate_torsion.psi 138.51 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 D THR 40 ? D THR 40 2 1 Y 1 F THR 40 ? F THR 40 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ASP N N N N 14 ASP CA C N S 15 ASP C C N N 16 ASP O O N N 17 ASP CB C N N 18 ASP CG C N N 19 ASP OD1 O N N 20 ASP OD2 O N N 21 ASP OXT O N N 22 ASP H H N N 23 ASP H2 H N N 24 ASP HA H N N 25 ASP HB2 H N N 26 ASP HB3 H N N 27 ASP HD2 H N N 28 ASP HXT H N N 29 CYS N N N N 30 CYS CA C N R 31 CYS C C N N 32 CYS O O N N 33 CYS CB C N N 34 CYS SG S N N 35 CYS OXT O N N 36 CYS H H N N 37 CYS H2 H N N 38 CYS HA H N N 39 CYS HB2 H N N 40 CYS HB3 H N N 41 CYS HG H N N 42 CYS HXT H N N 43 FUC C1 C N R 44 FUC C2 C N S 45 FUC C3 C N R 46 FUC C4 C N S 47 FUC C5 C N S 48 FUC C6 C N N 49 FUC O1 O N N 50 FUC O2 O N N 51 FUC O3 O N N 52 FUC O4 O N N 53 FUC O5 O N N 54 FUC H1 H N N 55 FUC H2 H N N 56 FUC H3 H N N 57 FUC H4 H N N 58 FUC H5 H N N 59 FUC H61 H N N 60 FUC H62 H N N 61 FUC H63 H N N 62 FUC HO1 H N N 63 FUC HO2 H N N 64 FUC HO3 H N N 65 FUC HO4 H N N 66 GLN N N N N 67 GLN CA C N S 68 GLN C C N N 69 GLN O O N N 70 GLN CB C N N 71 GLN CG C N N 72 GLN CD C N N 73 GLN OE1 O N N 74 GLN NE2 N N N 75 GLN OXT O N N 76 GLN H H N N 77 GLN H2 H N N 78 GLN HA H N N 79 GLN HB2 H N N 80 GLN HB3 H N N 81 GLN HG2 H N N 82 GLN HG3 H N N 83 GLN HE21 H N N 84 GLN HE22 H N N 85 GLN HXT H N N 86 GLY N N N N 87 GLY CA C N N 88 GLY C C N N 89 GLY O O N N 90 GLY OXT O N N 91 GLY H H N N 92 GLY H2 H N N 93 GLY HA2 H N N 94 GLY HA3 H N N 95 GLY HXT H N N 96 HIS N N N N 97 HIS CA C N S 98 HIS C C N N 99 HIS O O N N 100 HIS CB C N N 101 HIS CG C Y N 102 HIS ND1 N Y N 103 HIS CD2 C Y N 104 HIS CE1 C Y N 105 HIS NE2 N Y N 106 HIS OXT O N N 107 HIS H H N N 108 HIS H2 H N N 109 HIS HA H N N 110 HIS HB2 H N N 111 HIS HB3 H N N 112 HIS HD1 H N N 113 HIS HD2 H N N 114 HIS HE1 H N N 115 HIS HE2 H N N 116 HIS HXT H N N 117 HOH O O N N 118 HOH H1 H N N 119 HOH H2 H N N 120 LEU N N N N 121 LEU CA C N S 122 LEU C C N N 123 LEU O O N N 124 LEU CB C N N 125 LEU CG C N N 126 LEU CD1 C N N 127 LEU CD2 C N N 128 LEU OXT O N N 129 LEU H H N N 130 LEU H2 H N N 131 LEU HA H N N 132 LEU HB2 H N N 133 LEU HB3 H N N 134 LEU HG H N N 135 LEU HD11 H N N 136 LEU HD12 H N N 137 LEU HD13 H N N 138 LEU HD21 H N N 139 LEU HD22 H N N 140 LEU HD23 H N N 141 LEU HXT H N N 142 LYS N N N N 143 LYS CA C N S 144 LYS C C N N 145 LYS O O N N 146 LYS CB C N N 147 LYS CG C N N 148 LYS CD C N N 149 LYS CE C N N 150 LYS NZ N N N 151 LYS OXT O N N 152 LYS H H N N 153 LYS H2 H N N 154 LYS HA H N N 155 LYS HB2 H N N 156 LYS HB3 H N N 157 LYS HG2 H N N 158 LYS HG3 H N N 159 LYS HD2 H N N 160 LYS HD3 H N N 161 LYS HE2 H N N 162 LYS HE3 H N N 163 LYS HZ1 H N N 164 LYS HZ2 H N N 165 LYS HZ3 H N N 166 LYS HXT H N N 167 MEE C C N N 168 MEE S S N N 169 MEE H1 H N N 170 MEE H2 H N N 171 MEE H3 H N N 172 MEE HS H N N 173 NAG C1 C N R 174 NAG C2 C N R 175 NAG C3 C N R 176 NAG C4 C N S 177 NAG C5 C N R 178 NAG C6 C N N 179 NAG C7 C N N 180 NAG C8 C N N 181 NAG N2 N N N 182 NAG O1 O N N 183 NAG O3 O N N 184 NAG O4 O N N 185 NAG O5 O N N 186 NAG O6 O N N 187 NAG O7 O N N 188 NAG H1 H N N 189 NAG H2 H N N 190 NAG H3 H N N 191 NAG H4 H N N 192 NAG H5 H N N 193 NAG H61 H N N 194 NAG H62 H N N 195 NAG H81 H N N 196 NAG H82 H N N 197 NAG H83 H N N 198 NAG HN2 H N N 199 NAG HO1 H N N 200 NAG HO3 H N N 201 NAG HO4 H N N 202 NAG HO6 H N N 203 PHE N N N N 204 PHE CA C N S 205 PHE C C N N 206 PHE O O N N 207 PHE CB C N N 208 PHE CG C Y N 209 PHE CD1 C Y N 210 PHE CD2 C Y N 211 PHE CE1 C Y N 212 PHE CE2 C Y N 213 PHE CZ C Y N 214 PHE OXT O N N 215 PHE H H N N 216 PHE H2 H N N 217 PHE HA H N N 218 PHE HB2 H N N 219 PHE HB3 H N N 220 PHE HD1 H N N 221 PHE HD2 H N N 222 PHE HE1 H N N 223 PHE HE2 H N N 224 PHE HZ H N N 225 PHE HXT H N N 226 PRO N N N N 227 PRO CA C N S 228 PRO C C N N 229 PRO O O N N 230 PRO CB C N N 231 PRO CG C N N 232 PRO CD C N N 233 PRO OXT O N N 234 PRO H H N N 235 PRO HA H N N 236 PRO HB2 H N N 237 PRO HB3 H N N 238 PRO HG2 H N N 239 PRO HG3 H N N 240 PRO HD2 H N N 241 PRO HD3 H N N 242 PRO HXT H N N 243 THR N N N N 244 THR CA C N S 245 THR C C N N 246 THR O O N N 247 THR CB C N R 248 THR OG1 O N N 249 THR CG2 C N N 250 THR OXT O N N 251 THR H H N N 252 THR H2 H N N 253 THR HA H N N 254 THR HB H N N 255 THR HG1 H N N 256 THR HG21 H N N 257 THR HG22 H N N 258 THR HG23 H N N 259 THR HXT H N N 260 TRP N N N N 261 TRP CA C N S 262 TRP C C N N 263 TRP O O N N 264 TRP CB C N N 265 TRP CG C Y N 266 TRP CD1 C Y N 267 TRP CD2 C Y N 268 TRP NE1 N Y N 269 TRP CE2 C Y N 270 TRP CE3 C Y N 271 TRP CZ2 C Y N 272 TRP CZ3 C Y N 273 TRP CH2 C Y N 274 TRP OXT O N N 275 TRP H H N N 276 TRP H2 H N N 277 TRP HA H N N 278 TRP HB2 H N N 279 TRP HB3 H N N 280 TRP HD1 H N N 281 TRP HE1 H N N 282 TRP HE3 H N N 283 TRP HZ2 H N N 284 TRP HZ3 H N N 285 TRP HH2 H N N 286 TRP HXT H N N 287 TYR N N N N 288 TYR CA C N S 289 TYR C C N N 290 TYR O O N N 291 TYR CB C N N 292 TYR CG C Y N 293 TYR CD1 C Y N 294 TYR CD2 C Y N 295 TYR CE1 C Y N 296 TYR CE2 C Y N 297 TYR CZ C Y N 298 TYR OH O N N 299 TYR OXT O N N 300 TYR H H N N 301 TYR H2 H N N 302 TYR HA H N N 303 TYR HB2 H N N 304 TYR HB3 H N N 305 TYR HD1 H N N 306 TYR HD2 H N N 307 TYR HE1 H N N 308 TYR HE2 H N N 309 TYR HH H N N 310 TYR HXT H N N 311 VAL N N N N 312 VAL CA C N S 313 VAL C C N N 314 VAL O O N N 315 VAL CB C N N 316 VAL CG1 C N N 317 VAL CG2 C N N 318 VAL OXT O N N 319 VAL H H N N 320 VAL H2 H N N 321 VAL HA H N N 322 VAL HB H N N 323 VAL HG11 H N N 324 VAL HG12 H N N 325 VAL HG13 H N N 326 VAL HG21 H N N 327 VAL HG22 H N N 328 VAL HG23 H N N 329 VAL HXT H N N 330 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ASP N CA sing N N 13 ASP N H sing N N 14 ASP N H2 sing N N 15 ASP CA C sing N N 16 ASP CA CB sing N N 17 ASP CA HA sing N N 18 ASP C O doub N N 19 ASP C OXT sing N N 20 ASP CB CG sing N N 21 ASP CB HB2 sing N N 22 ASP CB HB3 sing N N 23 ASP CG OD1 doub N N 24 ASP CG OD2 sing N N 25 ASP OD2 HD2 sing N N 26 ASP OXT HXT sing N N 27 CYS N CA sing N N 28 CYS N H sing N N 29 CYS N H2 sing N N 30 CYS CA C sing N N 31 CYS CA CB sing N N 32 CYS CA HA sing N N 33 CYS C O doub N N 34 CYS C OXT sing N N 35 CYS CB SG sing N N 36 CYS CB HB2 sing N N 37 CYS CB HB3 sing N N 38 CYS SG HG sing N N 39 CYS OXT HXT sing N N 40 FUC C1 C2 sing N N 41 FUC C1 O1 sing N N 42 FUC C1 O5 sing N N 43 FUC C1 H1 sing N N 44 FUC C2 C3 sing N N 45 FUC C2 O2 sing N N 46 FUC C2 H2 sing N N 47 FUC C3 C4 sing N N 48 FUC C3 O3 sing N N 49 FUC C3 H3 sing N N 50 FUC C4 C5 sing N N 51 FUC C4 O4 sing N N 52 FUC C4 H4 sing N N 53 FUC C5 C6 sing N N 54 FUC C5 O5 sing N N 55 FUC C5 H5 sing N N 56 FUC C6 H61 sing N N 57 FUC C6 H62 sing N N 58 FUC C6 H63 sing N N 59 FUC O1 HO1 sing N N 60 FUC O2 HO2 sing N N 61 FUC O3 HO3 sing N N 62 FUC O4 HO4 sing N N 63 GLN N CA sing N N 64 GLN N H sing N N 65 GLN N H2 sing N N 66 GLN CA C sing N N 67 GLN CA CB sing N N 68 GLN CA HA sing N N 69 GLN C O doub N N 70 GLN C OXT sing N N 71 GLN CB CG sing N N 72 GLN CB HB2 sing N N 73 GLN CB HB3 sing N N 74 GLN CG CD sing N N 75 GLN CG HG2 sing N N 76 GLN CG HG3 sing N N 77 GLN CD OE1 doub N N 78 GLN CD NE2 sing N N 79 GLN NE2 HE21 sing N N 80 GLN NE2 HE22 sing N N 81 GLN OXT HXT sing N N 82 GLY N CA sing N N 83 GLY N H sing N N 84 GLY N H2 sing N N 85 GLY CA C sing N N 86 GLY CA HA2 sing N N 87 GLY CA HA3 sing N N 88 GLY C O doub N N 89 GLY C OXT sing N N 90 GLY OXT HXT sing N N 91 HIS N CA sing N N 92 HIS N H sing N N 93 HIS N H2 sing N N 94 HIS CA C sing N N 95 HIS CA CB sing N N 96 HIS CA HA sing N N 97 HIS C O doub N N 98 HIS C OXT sing N N 99 HIS CB CG sing N N 100 HIS CB HB2 sing N N 101 HIS CB HB3 sing N N 102 HIS CG ND1 sing Y N 103 HIS CG CD2 doub Y N 104 HIS ND1 CE1 doub Y N 105 HIS ND1 HD1 sing N N 106 HIS CD2 NE2 sing Y N 107 HIS CD2 HD2 sing N N 108 HIS CE1 NE2 sing Y N 109 HIS CE1 HE1 sing N N 110 HIS NE2 HE2 sing N N 111 HIS OXT HXT sing N N 112 HOH O H1 sing N N 113 HOH O H2 sing N N 114 LEU N CA sing N N 115 LEU N H sing N N 116 LEU N H2 sing N N 117 LEU CA C sing N N 118 LEU CA CB sing N N 119 LEU CA HA sing N N 120 LEU C O doub N N 121 LEU C OXT sing N N 122 LEU CB CG sing N N 123 LEU CB HB2 sing N N 124 LEU CB HB3 sing N N 125 LEU CG CD1 sing N N 126 LEU CG CD2 sing N N 127 LEU CG HG sing N N 128 LEU CD1 HD11 sing N N 129 LEU CD1 HD12 sing N N 130 LEU CD1 HD13 sing N N 131 LEU CD2 HD21 sing N N 132 LEU CD2 HD22 sing N N 133 LEU CD2 HD23 sing N N 134 LEU OXT HXT sing N N 135 LYS N CA sing N N 136 LYS N H sing N N 137 LYS N H2 sing N N 138 LYS CA C sing N N 139 LYS CA CB sing N N 140 LYS CA HA sing N N 141 LYS C O doub N N 142 LYS C OXT sing N N 143 LYS CB CG sing N N 144 LYS CB HB2 sing N N 145 LYS CB HB3 sing N N 146 LYS CG CD sing N N 147 LYS CG HG2 sing N N 148 LYS CG HG3 sing N N 149 LYS CD CE sing N N 150 LYS CD HD2 sing N N 151 LYS CD HD3 sing N N 152 LYS CE NZ sing N N 153 LYS CE HE2 sing N N 154 LYS CE HE3 sing N N 155 LYS NZ HZ1 sing N N 156 LYS NZ HZ2 sing N N 157 LYS NZ HZ3 sing N N 158 LYS OXT HXT sing N N 159 MEE C S sing N N 160 MEE C H1 sing N N 161 MEE C H2 sing N N 162 MEE C H3 sing N N 163 MEE S HS sing N N 164 NAG C1 C2 sing N N 165 NAG C1 O1 sing N N 166 NAG C1 O5 sing N N 167 NAG C1 H1 sing N N 168 NAG C2 C3 sing N N 169 NAG C2 N2 sing N N 170 NAG C2 H2 sing N N 171 NAG C3 C4 sing N N 172 NAG C3 O3 sing N N 173 NAG C3 H3 sing N N 174 NAG C4 C5 sing N N 175 NAG C4 O4 sing N N 176 NAG C4 H4 sing N N 177 NAG C5 C6 sing N N 178 NAG C5 O5 sing N N 179 NAG C5 H5 sing N N 180 NAG C6 O6 sing N N 181 NAG C6 H61 sing N N 182 NAG C6 H62 sing N N 183 NAG C7 C8 sing N N 184 NAG C7 N2 sing N N 185 NAG C7 O7 doub N N 186 NAG C8 H81 sing N N 187 NAG C8 H82 sing N N 188 NAG C8 H83 sing N N 189 NAG N2 HN2 sing N N 190 NAG O1 HO1 sing N N 191 NAG O3 HO3 sing N N 192 NAG O4 HO4 sing N N 193 NAG O6 HO6 sing N N 194 PHE N CA sing N N 195 PHE N H sing N N 196 PHE N H2 sing N N 197 PHE CA C sing N N 198 PHE CA CB sing N N 199 PHE CA HA sing N N 200 PHE C O doub N N 201 PHE C OXT sing N N 202 PHE CB CG sing N N 203 PHE CB HB2 sing N N 204 PHE CB HB3 sing N N 205 PHE CG CD1 doub Y N 206 PHE CG CD2 sing Y N 207 PHE CD1 CE1 sing Y N 208 PHE CD1 HD1 sing N N 209 PHE CD2 CE2 doub Y N 210 PHE CD2 HD2 sing N N 211 PHE CE1 CZ doub Y N 212 PHE CE1 HE1 sing N N 213 PHE CE2 CZ sing Y N 214 PHE CE2 HE2 sing N N 215 PHE CZ HZ sing N N 216 PHE OXT HXT sing N N 217 PRO N CA sing N N 218 PRO N CD sing N N 219 PRO N H sing N N 220 PRO CA C sing N N 221 PRO CA CB sing N N 222 PRO CA HA sing N N 223 PRO C O doub N N 224 PRO C OXT sing N N 225 PRO CB CG sing N N 226 PRO CB HB2 sing N N 227 PRO CB HB3 sing N N 228 PRO CG CD sing N N 229 PRO CG HG2 sing N N 230 PRO CG HG3 sing N N 231 PRO CD HD2 sing N N 232 PRO CD HD3 sing N N 233 PRO OXT HXT sing N N 234 THR N CA sing N N 235 THR N H sing N N 236 THR N H2 sing N N 237 THR CA C sing N N 238 THR CA CB sing N N 239 THR CA HA sing N N 240 THR C O doub N N 241 THR C OXT sing N N 242 THR CB OG1 sing N N 243 THR CB CG2 sing N N 244 THR CB HB sing N N 245 THR OG1 HG1 sing N N 246 THR CG2 HG21 sing N N 247 THR CG2 HG22 sing N N 248 THR CG2 HG23 sing N N 249 THR OXT HXT sing N N 250 TRP N CA sing N N 251 TRP N H sing N N 252 TRP N H2 sing N N 253 TRP CA C sing N N 254 TRP CA CB sing N N 255 TRP CA HA sing N N 256 TRP C O doub N N 257 TRP C OXT sing N N 258 TRP CB CG sing N N 259 TRP CB HB2 sing N N 260 TRP CB HB3 sing N N 261 TRP CG CD1 doub Y N 262 TRP CG CD2 sing Y N 263 TRP CD1 NE1 sing Y N 264 TRP CD1 HD1 sing N N 265 TRP CD2 CE2 doub Y N 266 TRP CD2 CE3 sing Y N 267 TRP NE1 CE2 sing Y N 268 TRP NE1 HE1 sing N N 269 TRP CE2 CZ2 sing Y N 270 TRP CE3 CZ3 doub Y N 271 TRP CE3 HE3 sing N N 272 TRP CZ2 CH2 doub Y N 273 TRP CZ2 HZ2 sing N N 274 TRP CZ3 CH2 sing Y N 275 TRP CZ3 HZ3 sing N N 276 TRP CH2 HH2 sing N N 277 TRP OXT HXT sing N N 278 TYR N CA sing N N 279 TYR N H sing N N 280 TYR N H2 sing N N 281 TYR CA C sing N N 282 TYR CA CB sing N N 283 TYR CA HA sing N N 284 TYR C O doub N N 285 TYR C OXT sing N N 286 TYR CB CG sing N N 287 TYR CB HB2 sing N N 288 TYR CB HB3 sing N N 289 TYR CG CD1 doub Y N 290 TYR CG CD2 sing Y N 291 TYR CD1 CE1 sing Y N 292 TYR CD1 HD1 sing N N 293 TYR CD2 CE2 doub Y N 294 TYR CD2 HD2 sing N N 295 TYR CE1 CZ doub Y N 296 TYR CE1 HE1 sing N N 297 TYR CE2 CZ sing Y N 298 TYR CE2 HE2 sing N N 299 TYR CZ OH sing N N 300 TYR OH HH sing N N 301 TYR OXT HXT sing N N 302 VAL N CA sing N N 303 VAL N H sing N N 304 VAL N H2 sing N N 305 VAL CA C sing N N 306 VAL CA CB sing N N 307 VAL CA HA sing N N 308 VAL C O doub N N 309 VAL C OXT sing N N 310 VAL CB CG1 sing N N 311 VAL CB CG2 sing N N 312 VAL CB HB sing N N 313 VAL CG1 HG11 sing N N 314 VAL CG1 HG12 sing N N 315 VAL CG1 HG13 sing N N 316 VAL CG2 HG21 sing N N 317 VAL CG2 HG22 sing N N 318 VAL CG2 HG23 sing N N 319 VAL OXT HXT sing N N 320 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero G 2 NAG 1 G NAG 1 F NAG 101 n G 2 FUC 2 G FUC 2 F FUC 102 n H 2 NAG 1 H NAG 1 D NAG 101 n H 2 FUC 2 H FUC 2 D FUC 102 n I 2 NAG 1 I NAG 1 E NAG 101 n I 2 FUC 2 I FUC 2 E FUC 102 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 LFucpa1-6DGlcpNAcb1-ROH 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/2,2,1/[a2122h-1b_1-5_2*NCC/3=O][a1221m-1a_1-5]/1-2/a6-b1' WURCS PDB2Glycan 1.1.0 3 2 '[][D-1-deoxy-GlcpNAc]{[(6+1)][a-L-Fucp]{}}' LINUCS PDB-CARE ? # _pdbx_entity_branch_link.link_id 1 _pdbx_entity_branch_link.entity_id 2 _pdbx_entity_branch_link.entity_branch_list_num_1 2 _pdbx_entity_branch_link.comp_id_1 FUC _pdbx_entity_branch_link.atom_id_1 C1 _pdbx_entity_branch_link.leaving_atom_id_1 O1 _pdbx_entity_branch_link.entity_branch_list_num_2 1 _pdbx_entity_branch_link.comp_id_2 NAG _pdbx_entity_branch_link.atom_id_2 O6 _pdbx_entity_branch_link.leaving_atom_id_2 HO6 _pdbx_entity_branch_link.value_order sing _pdbx_entity_branch_link.details ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 FUC 2 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 alpha-L-fucopyranose FUC 4 METHANETHIOL MEE 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 6A86 _pdbx_initial_refinement_model.details ? # loop_ _pdbx_struct_assembly_auth_evidence.id _pdbx_struct_assembly_auth_evidence.assembly_id _pdbx_struct_assembly_auth_evidence.experimental_support _pdbx_struct_assembly_auth_evidence.details 1 1 'gel filtration' ? 2 1 'mass spectrometry' ? 3 2 'gel filtration' ? 4 2 'mass spectrometry' ? #