HEADER MEMBRANE PROTEIN 11-JUL-18 6A93 TITLE CRYSTAL STRUCTURE OF 5-HT2AR IN COMPLEX WITH RISPERIDONE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5-HYDROXYTRYPTAMINE RECEPTOR 2A,SOLUBLE CYTOCHROME B562; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 5-HT-2A,SEROTONIN RECEPTOR 2A,CYTOCHROME B-562; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS, ESCHERICHIA COLI; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606, 562; SOURCE 5 GENE: HTR2A, HTR2, CYBC; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.K.KIMURA,H.ASADA,A.INOUE,F.M.N.KADJI,D.IM,C.MORI,T.ARAKAWA, AUTHOR 2 K.HIRATA,Y.NOMURA,N.NOMURA,J.AOKI,S.IWATA,T.SHIMAMURA REVDAT 3 22-NOV-23 6A93 1 REMARK REVDAT 2 20-NOV-19 6A93 1 JRNL REVDAT 1 13-FEB-19 6A93 0 JRNL AUTH K.T.KIMURA,H.ASADA,A.INOUE,F.M.N.KADJI,D.IM,C.MORI, JRNL AUTH 2 T.ARAKAWA,K.HIRATA,Y.NOMURA,N.NOMURA,J.AOKI,S.IWATA, JRNL AUTH 3 T.SHIMAMURA JRNL TITL STRUCTURES OF THE 5-HT2ARECEPTOR IN COMPLEX WITH THE JRNL TITL 2 ANTIPSYCHOTICS RISPERIDONE AND ZOTEPINE. JRNL REF NAT.STRUCT.MOL.BIOL. V. 26 121 2019 JRNL REFN ESSN 1545-9985 JRNL PMID 30723326 JRNL DOI 10.1038/S41594-018-0180-Z REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (DEV_3150) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.24 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.030 REMARK 3 COMPLETENESS FOR RANGE (%) : 84.0 REMARK 3 NUMBER OF REFLECTIONS : 18429 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.245 REMARK 3 R VALUE (WORKING SET) : 0.244 REMARK 3 FREE R VALUE : 0.275 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.490 REMARK 3 FREE R VALUE TEST SET COUNT : 1011 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.2463 - 5.7357 1.00 3093 182 0.2372 0.2434 REMARK 3 2 5.7357 - 4.5539 1.00 2976 168 0.2315 0.2448 REMARK 3 3 4.5539 - 3.9786 1.00 2965 168 0.2252 0.2575 REMARK 3 4 3.9786 - 3.6150 1.00 2927 180 0.2448 0.2883 REMARK 3 5 3.6150 - 3.3560 0.86 2511 137 0.2565 0.3151 REMARK 3 6 3.3560 - 3.1581 0.63 1851 114 0.2747 0.3254 REMARK 3 7 3.1581 - 3.0000 0.38 1095 62 0.2907 0.3390 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.960 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 6018 REMARK 3 ANGLE : 0.651 8173 REMARK 3 CHIRALITY : 0.040 969 REMARK 3 PLANARITY : 0.004 974 REMARK 3 DIHEDRAL : 12.015 3602 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 69 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.6808 4.5076 70.7583 REMARK 3 T TENSOR REMARK 3 T11: 0.5154 T22: 1.3779 REMARK 3 T33: 0.9780 T12: -0.0869 REMARK 3 T13: 0.1916 T23: -0.5543 REMARK 3 L TENSOR REMARK 3 L11: 1.1936 L22: 1.8780 REMARK 3 L33: 1.1415 L12: -1.1697 REMARK 3 L13: 0.5905 L23: 0.0648 REMARK 3 S TENSOR REMARK 3 S11: -0.1091 S12: -1.3421 S13: 0.4284 REMARK 3 S21: 0.4594 S22: 0.3077 S23: 0.1081 REMARK 3 S31: 0.1091 S32: -0.2851 S33: -0.1325 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND ((RESID 145 THROUGH 265 ) OR (RESID REMARK 3 1001 THROUGH 1106 ) OR (RESID 313 THROUGH 348 )) REMARK 3 ORIGIN FOR THE GROUP (A): 41.8946 -1.3750 53.2675 REMARK 3 T TENSOR REMARK 3 T11: 0.2109 T22: -0.2713 REMARK 3 T33: 0.4002 T12: 0.0872 REMARK 3 T13: 0.1726 T23: 0.0672 REMARK 3 L TENSOR REMARK 3 L11: 0.4497 L22: 0.8651 REMARK 3 L33: 1.2257 L12: 0.0088 REMARK 3 L13: 0.0743 L23: 0.0815 REMARK 3 S TENSOR REMARK 3 S11: 0.0286 S12: -0.2235 S13: 0.0584 REMARK 3 S21: 0.2888 S22: -0.0692 S23: 0.4928 REMARK 3 S31: -0.0268 S32: -0.8647 S33: 0.0687 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 349 THROUGH 399 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.5504 -3.4610 69.6949 REMARK 3 T TENSOR REMARK 3 T11: 0.3981 T22: 1.3501 REMARK 3 T33: 0.7981 T12: -0.1396 REMARK 3 T13: 0.2018 T23: -0.0012 REMARK 3 L TENSOR REMARK 3 L11: 1.7848 L22: 3.7405 REMARK 3 L33: 2.9094 L12: -0.7023 REMARK 3 L13: -2.1347 L23: -0.2719 REMARK 3 S TENSOR REMARK 3 S11: -0.0123 S12: -0.7017 S13: -0.1977 REMARK 3 S21: 0.2884 S22: 0.1719 S23: 0.3255 REMARK 3 S31: 0.0462 S32: 0.1452 S33: -0.0980 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 72 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.6030 -7.5122 29.8674 REMARK 3 T TENSOR REMARK 3 T11: 0.4906 T22: 0.7173 REMARK 3 T33: 0.3070 T12: -0.1053 REMARK 3 T13: 0.1253 T23: -0.1053 REMARK 3 L TENSOR REMARK 3 L11: 6.5460 L22: 3.7576 REMARK 3 L33: 3.8312 L12: -1.8029 REMARK 3 L13: -0.9027 L23: -0.3779 REMARK 3 S TENSOR REMARK 3 S11: 0.3680 S12: 0.3353 S13: -0.0467 REMARK 3 S21: 0.3171 S22: -0.0203 S23: 0.4878 REMARK 3 S31: 0.7016 S32: -0.5326 S33: -0.3384 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 102 THROUGH 243 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.0975 7.8988 20.9241 REMARK 3 T TENSOR REMARK 3 T11: 0.4610 T22: 1.2319 REMARK 3 T33: 1.2478 T12: 0.1031 REMARK 3 T13: 0.3598 T23: 0.3562 REMARK 3 L TENSOR REMARK 3 L11: 1.1642 L22: 1.0563 REMARK 3 L33: 0.9191 L12: 0.5428 REMARK 3 L13: -0.7527 L23: 0.2282 REMARK 3 S TENSOR REMARK 3 S11: 0.0603 S12: 0.3386 S13: 0.7029 REMARK 3 S21: 0.0412 S22: -0.1023 S23: -0.1685 REMARK 3 S31: -0.1471 S32: -0.0962 S33: 0.0883 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND ((RESID 244 THROUGH 265 ) OR (RESID REMARK 3 1001 THROUGH 1083 )) REMARK 3 ORIGIN FOR THE GROUP (A): 64.2343 6.0349 1.4453 REMARK 3 T TENSOR REMARK 3 T11: 0.5466 T22: 1.6344 REMARK 3 T33: 0.7550 T12: 0.0040 REMARK 3 T13: 0.2513 T23: 0.2405 REMARK 3 L TENSOR REMARK 3 L11: 3.2142 L22: 0.8259 REMARK 3 L33: 0.4975 L12: -0.0810 REMARK 3 L13: -0.9690 L23: 0.1838 REMARK 3 S TENSOR REMARK 3 S11: 0.2516 S12: -0.0489 S13: 0.4006 REMARK 3 S21: -0.1374 S22: 0.2494 S23: -0.1415 REMARK 3 S31: -0.2423 S32: -0.0994 S33: -0.2776 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND ((RESID 1084 THROUGH 1106 ) OR (RESID REMARK 3 313 THROUGH 348 )) REMARK 3 ORIGIN FOR THE GROUP (A): 47.5158 -0.4583 9.8685 REMARK 3 T TENSOR REMARK 3 T11: 0.4854 T22: 1.4383 REMARK 3 T33: 0.5718 T12: 0.0782 REMARK 3 T13: 0.2365 T23: 0.0808 REMARK 3 L TENSOR REMARK 3 L11: 3.3432 L22: 0.8175 REMARK 3 L33: 1.1661 L12: -0.2925 REMARK 3 L13: -1.9635 L23: 0.0975 REMARK 3 S TENSOR REMARK 3 S11: 0.0383 S12: -0.0152 S13: 0.2078 REMARK 3 S21: -0.1792 S22: -0.0915 S23: -0.2437 REMARK 3 S31: 0.0368 S32: -0.1680 S33: -0.0178 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 349 THROUGH 382 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.1288 -6.5547 15.5680 REMARK 3 T TENSOR REMARK 3 T11: 0.4964 T22: 1.7777 REMARK 3 T33: 0.6755 T12: -0.0876 REMARK 3 T13: 0.0459 T23: -0.1810 REMARK 3 L TENSOR REMARK 3 L11: 0.1001 L22: 5.6639 REMARK 3 L33: 0.2381 L12: -0.1916 REMARK 3 L13: 0.1251 L23: -0.6633 REMARK 3 S TENSOR REMARK 3 S11: 0.2558 S12: 1.1927 S13: 0.4267 REMARK 3 S21: -0.6346 S22: -0.2187 S23: 1.0325 REMARK 3 S31: 0.0815 S32: -0.5561 S33: 0.0072 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 383 THROUGH 401 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.3721 -7.1268 32.1730 REMARK 3 T TENSOR REMARK 3 T11: 0.3547 T22: 0.7142 REMARK 3 T33: 0.3790 T12: -0.0720 REMARK 3 T13: -0.1393 T23: -0.0795 REMARK 3 L TENSOR REMARK 3 L11: 0.8963 L22: 4.4756 REMARK 3 L33: 2.8269 L12: -1.7879 REMARK 3 L13: 0.8765 L23: -2.1879 REMARK 3 S TENSOR REMARK 3 S11: 0.2853 S12: 0.9082 S13: 0.0584 REMARK 3 S21: 0.1828 S22: -0.0835 S23: -0.4092 REMARK 3 S31: 0.7284 S32: 0.5860 S33: -0.2248 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6A93 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1300008335. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0-6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL32XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225-HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29971 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.707 REMARK 200 RESOLUTION RANGE LOW (A) : 46.241 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 84.0 REMARK 200 DATA REDUNDANCY : 22.40 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.6300 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.71 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2RH1 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MES, PH 6.0-6.5, 28-31% (V/V) REMARK 280 PEG 400, 120-200 MM AM-FORMATE, 1-2% (V/V) DMSO, LIPIDIC CUBIC REMARK 280 PHASE, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 138.86000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 21.07500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 138.86000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 21.07500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 67 REMARK 465 GLY A 68 REMARK 465 LYS A 400 REMARK 465 GLU A 401 REMARK 465 ASN A 402 REMARK 465 LYS A 403 REMARK 465 GLY B 67 REMARK 465 GLY B 68 REMARK 465 THR B 69 REMARK 465 HIS B 70 REMARK 465 LEU B 71 REMARK 465 ILE B 181 REMARK 465 HIS B 182 REMARK 465 HIS B 183 REMARK 465 SER B 184 REMARK 465 ARG B 185 REMARK 465 PHE B 186 REMARK 465 ASN B 187 REMARK 465 SER B 1042 REMARK 465 GLY B 1043 REMARK 465 SER B 1044 REMARK 465 ASN B 402 REMARK 465 LYS B 403 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 1066 OH TYR A 1105 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 243 -50.45 -122.01 REMARK 500 PHE B 243 -50.17 -122.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 1PE A 3004 REMARK 610 1PE A 3006 REMARK 610 PLM B 3002 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A3003 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 182 NE2 REMARK 620 2 HIS A 183 NE2 108.7 REMARK 620 3 GLU A 264 OE2 101.5 99.7 REMARK 620 4 GLU A 318 OE1 146.5 93.5 99.0 REMARK 620 5 GLU A 318 OE2 91.5 109.8 141.9 56.7 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8NU A 3001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CLR A 3002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 3003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1PE A 3004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1PE A 3005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1PE A 3006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 8NU B 3001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PLM B 3002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CLR B 3003 DBREF 6A93 A 70 265 UNP P28223 5HT2A_HUMAN 70 265 DBREF 6A93 A 1001 1040 UNP P0ABE7 C562_ECOLX 23 62 DBREF 6A93 A 1066 1106 UNP P0ABE7 C562_ECOLX 88 128 DBREF 6A93 A 313 403 UNP P28223 5HT2A_HUMAN 313 403 DBREF 6A93 B 70 265 UNP P28223 5HT2A_HUMAN 70 265 DBREF 6A93 B 1001 1040 UNP P0ABE7 C562_ECOLX 23 62 DBREF 6A93 B 1066 1106 UNP P0ABE7 C562_ECOLX 88 128 DBREF 6A93 B 313 403 UNP P28223 5HT2A_HUMAN 313 403 SEQADV 6A93 GLY A 67 UNP P28223 EXPRESSION TAG SEQADV 6A93 GLY A 68 UNP P28223 EXPRESSION TAG SEQADV 6A93 THR A 69 UNP P28223 EXPRESSION TAG SEQADV 6A93 LYS A 162 UNP P28223 SER 162 ENGINEERED MUTATION SEQADV 6A93 TRP A 164 UNP P28223 MET 164 ENGINEERED MUTATION SEQADV 6A93 TRP A 1007 UNP P0ABE7 MET 29 ENGINEERED MUTATION SEQADV 6A93 GLY A 1041 UNP P0ABE7 LINKER SEQADV 6A93 SER A 1042 UNP P0ABE7 LINKER SEQADV 6A93 GLY A 1043 UNP P0ABE7 LINKER SEQADV 6A93 SER A 1044 UNP P0ABE7 LINKER SEQADV 6A93 GLY A 1045 UNP P0ABE7 LINKER SEQADV 6A93 ILE A 1098 UNP P0ABE7 ARG 120 ENGINEERED MUTATION SEQADV 6A93 ILE A 1102 UNP P0ABE7 HIS 124 ENGINEERED MUTATION SEQADV 6A93 GLY A 1106 UNP P0ABE7 ARG 128 ENGINEERED MUTATION SEQADV 6A93 GLY B 67 UNP P28223 EXPRESSION TAG SEQADV 6A93 GLY B 68 UNP P28223 EXPRESSION TAG SEQADV 6A93 THR B 69 UNP P28223 EXPRESSION TAG SEQADV 6A93 LYS B 162 UNP P28223 SER 162 ENGINEERED MUTATION SEQADV 6A93 TRP B 164 UNP P28223 MET 164 ENGINEERED MUTATION SEQADV 6A93 TRP B 1007 UNP P0ABE7 MET 29 ENGINEERED MUTATION SEQADV 6A93 GLY B 1041 UNP P0ABE7 LINKER SEQADV 6A93 SER B 1042 UNP P0ABE7 LINKER SEQADV 6A93 GLY B 1043 UNP P0ABE7 LINKER SEQADV 6A93 SER B 1044 UNP P0ABE7 LINKER SEQADV 6A93 GLY B 1045 UNP P0ABE7 LINKER SEQADV 6A93 ILE B 1098 UNP P0ABE7 ARG 120 ENGINEERED MUTATION SEQADV 6A93 ILE B 1102 UNP P0ABE7 HIS 124 ENGINEERED MUTATION SEQADV 6A93 GLY B 1106 UNP P0ABE7 ARG 128 ENGINEERED MUTATION SEQRES 1 A 376 GLY GLY THR HIS LEU GLN GLU LYS ASN TRP SER ALA LEU SEQRES 2 A 376 LEU THR ALA VAL VAL ILE ILE LEU THR ILE ALA GLY ASN SEQRES 3 A 376 ILE LEU VAL ILE MET ALA VAL SER LEU GLU LYS LYS LEU SEQRES 4 A 376 GLN ASN ALA THR ASN TYR PHE LEU MET SER LEU ALA ILE SEQRES 5 A 376 ALA ASP MET LEU LEU GLY PHE LEU VAL MET PRO VAL SER SEQRES 6 A 376 MET LEU THR ILE LEU TYR GLY TYR ARG TRP PRO LEU PRO SEQRES 7 A 376 SER LYS LEU CYS ALA VAL TRP ILE TYR LEU ASP VAL LEU SEQRES 8 A 376 PHE SER THR ALA LYS ILE TRP HIS LEU CYS ALA ILE SER SEQRES 9 A 376 LEU ASP ARG TYR VAL ALA ILE GLN ASN PRO ILE HIS HIS SEQRES 10 A 376 SER ARG PHE ASN SER ARG THR LYS ALA PHE LEU LYS ILE SEQRES 11 A 376 ILE ALA VAL TRP THR ILE SER VAL GLY ILE SER MET PRO SEQRES 12 A 376 ILE PRO VAL PHE GLY LEU GLN ASP ASP SER LYS VAL PHE SEQRES 13 A 376 LYS GLU GLY SER CYS LEU LEU ALA ASP ASP ASN PHE VAL SEQRES 14 A 376 LEU ILE GLY SER PHE VAL SER PHE PHE ILE PRO LEU THR SEQRES 15 A 376 ILE MET VAL ILE THR TYR PHE LEU THR ILE LYS SER LEU SEQRES 16 A 376 GLN LYS GLU ALA ALA ASP LEU GLU ASP ASN TRP GLU THR SEQRES 17 A 376 LEU ASN ASP ASN LEU LYS VAL ILE GLU LYS ALA ASP ASN SEQRES 18 A 376 ALA ALA GLN VAL LYS ASP ALA LEU THR LYS MET ARG ALA SEQRES 19 A 376 ALA ALA LEU ASP ALA GLY SER GLY SER GLY ASP ILE LEU SEQRES 20 A 376 VAL GLY GLN ILE ASP ASP ALA LEU LYS LEU ALA ASN GLU SEQRES 21 A 376 GLY LYS VAL LYS GLU ALA GLN ALA ALA ALA GLU GLN LEU SEQRES 22 A 376 LYS THR THR ILE ASN ALA TYR ILE GLN LYS TYR GLY GLN SEQRES 23 A 376 SER ILE SER ASN GLU GLN LYS ALA CYS LYS VAL LEU GLY SEQRES 24 A 376 ILE VAL PHE PHE LEU PHE VAL VAL MET TRP CYS PRO PHE SEQRES 25 A 376 PHE ILE THR ASN ILE MET ALA VAL ILE CYS LYS GLU SER SEQRES 26 A 376 CYS ASN GLU ASP VAL ILE GLY ALA LEU LEU ASN VAL PHE SEQRES 27 A 376 VAL TRP ILE GLY TYR LEU SER SER ALA VAL ASN PRO LEU SEQRES 28 A 376 VAL TYR THR LEU PHE ASN LYS THR TYR ARG SER ALA PHE SEQRES 29 A 376 SER ARG TYR ILE GLN CYS GLN TYR LYS GLU ASN LYS SEQRES 1 B 376 GLY GLY THR HIS LEU GLN GLU LYS ASN TRP SER ALA LEU SEQRES 2 B 376 LEU THR ALA VAL VAL ILE ILE LEU THR ILE ALA GLY ASN SEQRES 3 B 376 ILE LEU VAL ILE MET ALA VAL SER LEU GLU LYS LYS LEU SEQRES 4 B 376 GLN ASN ALA THR ASN TYR PHE LEU MET SER LEU ALA ILE SEQRES 5 B 376 ALA ASP MET LEU LEU GLY PHE LEU VAL MET PRO VAL SER SEQRES 6 B 376 MET LEU THR ILE LEU TYR GLY TYR ARG TRP PRO LEU PRO SEQRES 7 B 376 SER LYS LEU CYS ALA VAL TRP ILE TYR LEU ASP VAL LEU SEQRES 8 B 376 PHE SER THR ALA LYS ILE TRP HIS LEU CYS ALA ILE SER SEQRES 9 B 376 LEU ASP ARG TYR VAL ALA ILE GLN ASN PRO ILE HIS HIS SEQRES 10 B 376 SER ARG PHE ASN SER ARG THR LYS ALA PHE LEU LYS ILE SEQRES 11 B 376 ILE ALA VAL TRP THR ILE SER VAL GLY ILE SER MET PRO SEQRES 12 B 376 ILE PRO VAL PHE GLY LEU GLN ASP ASP SER LYS VAL PHE SEQRES 13 B 376 LYS GLU GLY SER CYS LEU LEU ALA ASP ASP ASN PHE VAL SEQRES 14 B 376 LEU ILE GLY SER PHE VAL SER PHE PHE ILE PRO LEU THR SEQRES 15 B 376 ILE MET VAL ILE THR TYR PHE LEU THR ILE LYS SER LEU SEQRES 16 B 376 GLN LYS GLU ALA ALA ASP LEU GLU ASP ASN TRP GLU THR SEQRES 17 B 376 LEU ASN ASP ASN LEU LYS VAL ILE GLU LYS ALA ASP ASN SEQRES 18 B 376 ALA ALA GLN VAL LYS ASP ALA LEU THR LYS MET ARG ALA SEQRES 19 B 376 ALA ALA LEU ASP ALA GLY SER GLY SER GLY ASP ILE LEU SEQRES 20 B 376 VAL GLY GLN ILE ASP ASP ALA LEU LYS LEU ALA ASN GLU SEQRES 21 B 376 GLY LYS VAL LYS GLU ALA GLN ALA ALA ALA GLU GLN LEU SEQRES 22 B 376 LYS THR THR ILE ASN ALA TYR ILE GLN LYS TYR GLY GLN SEQRES 23 B 376 SER ILE SER ASN GLU GLN LYS ALA CYS LYS VAL LEU GLY SEQRES 24 B 376 ILE VAL PHE PHE LEU PHE VAL VAL MET TRP CYS PRO PHE SEQRES 25 B 376 PHE ILE THR ASN ILE MET ALA VAL ILE CYS LYS GLU SER SEQRES 26 B 376 CYS ASN GLU ASP VAL ILE GLY ALA LEU LEU ASN VAL PHE SEQRES 27 B 376 VAL TRP ILE GLY TYR LEU SER SER ALA VAL ASN PRO LEU SEQRES 28 B 376 VAL TYR THR LEU PHE ASN LYS THR TYR ARG SER ALA PHE SEQRES 29 B 376 SER ARG TYR ILE GLN CYS GLN TYR LYS GLU ASN LYS HET 8NU A3001 30 HET CLR A3002 28 HET ZN A3003 1 HET 1PE A3004 13 HET 1PE A3005 16 HET 1PE A3006 10 HET 8NU B3001 30 HET PLM B3002 10 HET CLR B3003 28 HETNAM 8NU 3-[2-[4-(6-FLUORANYL-1,2-BENZOXAZOL-3-YL)PIPERIDIN-1- HETNAM 2 8NU YL]ETHYL]-2-METHYL-6,7,8,9-TETRAHYDROPYRIDO[1,2- HETNAM 3 8NU A]PYRIMIDIN-4-ONE HETNAM CLR CHOLESTEROL HETNAM ZN ZINC ION HETNAM 1PE PENTAETHYLENE GLYCOL HETNAM PLM PALMITIC ACID HETSYN 1PE PEG400 FORMUL 3 8NU 2(C23 H27 F N4 O2) FORMUL 4 CLR 2(C27 H46 O) FORMUL 5 ZN ZN 2+ FORMUL 6 1PE 3(C10 H22 O6) FORMUL 10 PLM C16 H32 O2 HELIX 1 AA1 THR A 69 GLU A 102 1 34 HELIX 2 AA2 LYS A 103 GLN A 106 5 4 HELIX 3 AA3 ASN A 107 VAL A 127 1 21 HELIX 4 AA4 VAL A 127 TYR A 137 1 11 HELIX 5 AA5 PRO A 144 ASN A 179 1 36 HELIX 6 AA6 SER A 188 MET A 208 1 21 HELIX 7 AA7 MET A 208 ASP A 217 1 10 HELIX 8 AA8 ASP A 231 PHE A 243 1 13 HELIX 9 AA9 PHE A 243 LYS A 1019 1 42 HELIX 10 AB1 ASN A 1022 GLY A 1041 1 20 HELIX 11 AB2 ILE A 1067 GLU A 1081 1 15 HELIX 12 AB3 LYS A 1083 CYS A 349 1 61 HELIX 13 AB4 ASN A 354 PHE A 383 1 30 HELIX 14 AB5 ASN A 384 GLN A 396 1 13 HELIX 15 AB6 GLU B 73 GLU B 102 1 30 HELIX 16 AB7 ASN B 107 VAL B 127 1 21 HELIX 17 AB8 VAL B 127 TYR B 137 1 11 HELIX 18 AB9 PRO B 144 ASN B 179 1 36 HELIX 19 AC1 ARG B 189 MET B 208 1 20 HELIX 20 AC2 MET B 208 ASP B 217 1 10 HELIX 21 AC3 ASP B 218 VAL B 221 5 4 HELIX 22 AC4 ASP B 231 PHE B 243 1 13 HELIX 23 AC5 PHE B 243 LYS B 1019 1 42 HELIX 24 AC6 ASN B 1022 GLY B 1041 1 20 HELIX 25 AC7 ASP B 1066 GLU B 1081 1 16 HELIX 26 AC8 LYS B 1083 CYS B 349 1 61 HELIX 27 AC9 GLU B 355 PHE B 383 1 29 HELIX 28 AD1 ASN B 384 GLN B 396 1 13 SSBOND 1 CYS A 148 CYS A 227 1555 1555 2.03 SSBOND 2 CYS A 349 CYS A 353 1555 1555 2.04 SSBOND 3 CYS B 148 CYS B 227 1555 1555 2.03 SSBOND 4 CYS B 349 CYS B 353 1555 1555 2.03 LINK SG CYS B 397 C1 PLM B3002 1555 1555 1.75 LINK NE2 HIS A 182 ZN ZN A3003 1555 1555 2.10 LINK NE2 HIS A 183 ZN ZN A3003 1555 1555 2.16 LINK OE2 GLU A 264 ZN ZN A3003 1555 1555 1.97 LINK OE1 GLU A 318 ZN ZN A3003 1555 1555 1.97 LINK OE2 GLU A 318 ZN ZN A3003 1555 1555 2.53 SITE 1 AC1 16 SER A 131 TRP A 151 ASP A 155 SER A 159 SITE 2 AC1 16 THR A 160 ILE A 163 LEU A 228 SER A 242 SITE 3 AC1 16 PHE A 243 PHE A 332 TRP A 336 PHE A 339 SITE 4 AC1 16 PHE A 340 LEU A 362 ASN A 363 TYR A 370 SITE 1 AC2 7 MET A 114 ILE A 118 TYR A 153 PHE A 193 SITE 2 AC2 7 ILE A 196 TRP A 200 VAL A 204 SITE 1 AC3 4 HIS A 182 HIS A 183 GLU A 264 GLU A 318 SITE 1 AC4 1 SER A 226 SITE 1 AC5 7 LEU A 261 GLN A 262 ALA A 265 ILE A 315 SITE 2 AC5 7 GLN A 319 GLU A1004 ASN A1080 SITE 1 AC6 3 GLU A1004 TRP A1007 LYS A1027 SITE 1 AC7 15 SER B 131 TRP B 151 ASP B 155 VAL B 156 SITE 2 AC7 15 SER B 159 THR B 160 ILE B 163 LEU B 228 SITE 3 AC7 15 SER B 242 PHE B 332 TRP B 336 PHE B 339 SITE 4 AC7 15 PHE B 340 ASN B 363 TYR B 370 SITE 1 AC8 4 ILE B 395 GLN B 396 CYS B 397 CLR B3003 SITE 1 AC9 4 LEU B 94 TYR B 394 TYR B 399 PLM B3002 CRYST1 277.720 42.150 91.940 90.00 92.55 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.003601 0.000000 0.000160 0.00000 SCALE2 0.000000 0.023725 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010887 0.00000