data_6A9A # _entry.id 6A9A # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.380 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6A9A pdb_00006a9a 10.2210/pdb6a9a/pdb WWPDB D_1300008359 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6A9A _pdbx_database_status.recvd_initial_deposition_date 2018-07-12 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category CAPRI _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Park, S.H.' 1 0000-0003-3518-7808 'Song, H.K.' 2 0000-0001-5684-4059 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Iucrj _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 2052-2525 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 6 _citation.language ? _citation.page_first 206 _citation.page_last 217 _citation.title ;A cytosine modification mechanism revealed by the structure of a ternary complex of deoxycytidylate hydroxymethylase from bacteriophage T4 with its cofactor and substrate. ; _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1107/S2052252518018274 _citation.pdbx_database_id_PubMed 30867918 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Park, S.H.' 1 0000-0003-3518-7808 primary 'Suh, S.W.' 2 0000-0002-1768-4635 primary 'Song, H.K.' 3 0000-0001-5684-4059 # _cell.entry_id 6A9A _cell.length_a 52.625 _cell.length_b 75.226 _cell.length_c 154.087 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6A9A _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 23 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Deoxycytidylate 5-hydroxymethyltransferase' 28506.178 1 2.1.2.8 'C148S, D179N' ? ? 2 non-polymer syn 'IODIDE ION' 126.904 1 ? ? ? ? 3 non-polymer syn "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" 307.197 1 ? ? ? ? 4 non-polymer syn '(6S)-5,6,7,8-TETRAHYDROFOLATE' 445.429 1 ? ? ? ? 5 water nat water 18.015 255 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Deoxycytidylate hydroxymethylase,dCMP hydroxymethylase,dCMP HMase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MISDSMTVEEIRLHLGLALKEKDFVVDKTGVKTIEIIGASFVADEPFIFGALNDEYIQRELEWYKSKSLFVKDIPGETPK IWQQVASSKGEINSNYGWAIWSEDNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQFDYNKDGMSDFMSTNTVQYLIRDKK INAVVNMRSNDVVFGFRNNYAWQKYVLDKLVSDLNAGDSTRQYKAGSIIWNVGSLHVYSRHFYLVDHWWKTGETHISKKD YVGKYA ; _entity_poly.pdbx_seq_one_letter_code_can ;MISDSMTVEEIRLHLGLALKEKDFVVDKTGVKTIEIIGASFVADEPFIFGALNDEYIQRELEWYKSKSLFVKDIPGETPK IWQQVASSKGEINSNYGWAIWSEDNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQFDYNKDGMSDFMSTNTVQYLIRDKK INAVVNMRSNDVVFGFRNNYAWQKYVLDKLVSDLNAGDSTRQYKAGSIIWNVGSLHVYSRHFYLVDHWWKTGETHISKKD YVGKYA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ILE n 1 3 SER n 1 4 ASP n 1 5 SER n 1 6 MET n 1 7 THR n 1 8 VAL n 1 9 GLU n 1 10 GLU n 1 11 ILE n 1 12 ARG n 1 13 LEU n 1 14 HIS n 1 15 LEU n 1 16 GLY n 1 17 LEU n 1 18 ALA n 1 19 LEU n 1 20 LYS n 1 21 GLU n 1 22 LYS n 1 23 ASP n 1 24 PHE n 1 25 VAL n 1 26 VAL n 1 27 ASP n 1 28 LYS n 1 29 THR n 1 30 GLY n 1 31 VAL n 1 32 LYS n 1 33 THR n 1 34 ILE n 1 35 GLU n 1 36 ILE n 1 37 ILE n 1 38 GLY n 1 39 ALA n 1 40 SER n 1 41 PHE n 1 42 VAL n 1 43 ALA n 1 44 ASP n 1 45 GLU n 1 46 PRO n 1 47 PHE n 1 48 ILE n 1 49 PHE n 1 50 GLY n 1 51 ALA n 1 52 LEU n 1 53 ASN n 1 54 ASP n 1 55 GLU n 1 56 TYR n 1 57 ILE n 1 58 GLN n 1 59 ARG n 1 60 GLU n 1 61 LEU n 1 62 GLU n 1 63 TRP n 1 64 TYR n 1 65 LYS n 1 66 SER n 1 67 LYS n 1 68 SER n 1 69 LEU n 1 70 PHE n 1 71 VAL n 1 72 LYS n 1 73 ASP n 1 74 ILE n 1 75 PRO n 1 76 GLY n 1 77 GLU n 1 78 THR n 1 79 PRO n 1 80 LYS n 1 81 ILE n 1 82 TRP n 1 83 GLN n 1 84 GLN n 1 85 VAL n 1 86 ALA n 1 87 SER n 1 88 SER n 1 89 LYS n 1 90 GLY n 1 91 GLU n 1 92 ILE n 1 93 ASN n 1 94 SER n 1 95 ASN n 1 96 TYR n 1 97 GLY n 1 98 TRP n 1 99 ALA n 1 100 ILE n 1 101 TRP n 1 102 SER n 1 103 GLU n 1 104 ASP n 1 105 ASN n 1 106 TYR n 1 107 ALA n 1 108 GLN n 1 109 TYR n 1 110 ASP n 1 111 MET n 1 112 CYS n 1 113 LEU n 1 114 ALA n 1 115 GLU n 1 116 LEU n 1 117 GLY n 1 118 GLN n 1 119 ASN n 1 120 PRO n 1 121 ASP n 1 122 SER n 1 123 ARG n 1 124 ARG n 1 125 GLY n 1 126 ILE n 1 127 MET n 1 128 ILE n 1 129 TYR n 1 130 THR n 1 131 ARG n 1 132 PRO n 1 133 SER n 1 134 MET n 1 135 GLN n 1 136 PHE n 1 137 ASP n 1 138 TYR n 1 139 ASN n 1 140 LYS n 1 141 ASP n 1 142 GLY n 1 143 MET n 1 144 SER n 1 145 ASP n 1 146 PHE n 1 147 MET n 1 148 SER n 1 149 THR n 1 150 ASN n 1 151 THR n 1 152 VAL n 1 153 GLN n 1 154 TYR n 1 155 LEU n 1 156 ILE n 1 157 ARG n 1 158 ASP n 1 159 LYS n 1 160 LYS n 1 161 ILE n 1 162 ASN n 1 163 ALA n 1 164 VAL n 1 165 VAL n 1 166 ASN n 1 167 MET n 1 168 ARG n 1 169 SER n 1 170 ASN n 1 171 ASP n 1 172 VAL n 1 173 VAL n 1 174 PHE n 1 175 GLY n 1 176 PHE n 1 177 ARG n 1 178 ASN n 1 179 ASN n 1 180 TYR n 1 181 ALA n 1 182 TRP n 1 183 GLN n 1 184 LYS n 1 185 TYR n 1 186 VAL n 1 187 LEU n 1 188 ASP n 1 189 LYS n 1 190 LEU n 1 191 VAL n 1 192 SER n 1 193 ASP n 1 194 LEU n 1 195 ASN n 1 196 ALA n 1 197 GLY n 1 198 ASP n 1 199 SER n 1 200 THR n 1 201 ARG n 1 202 GLN n 1 203 TYR n 1 204 LYS n 1 205 ALA n 1 206 GLY n 1 207 SER n 1 208 ILE n 1 209 ILE n 1 210 TRP n 1 211 ASN n 1 212 VAL n 1 213 GLY n 1 214 SER n 1 215 LEU n 1 216 HIS n 1 217 VAL n 1 218 TYR n 1 219 SER n 1 220 ARG n 1 221 HIS n 1 222 PHE n 1 223 TYR n 1 224 LEU n 1 225 VAL n 1 226 ASP n 1 227 HIS n 1 228 TRP n 1 229 TRP n 1 230 LYS n 1 231 THR n 1 232 GLY n 1 233 GLU n 1 234 THR n 1 235 HIS n 1 236 ILE n 1 237 SER n 1 238 LYS n 1 239 LYS n 1 240 ASP n 1 241 TYR n 1 242 VAL n 1 243 GLY n 1 244 LYS n 1 245 TYR n 1 246 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 246 _entity_src_gen.gene_src_common_name 'Bacteriophage T4' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 42 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Enterobacteria phage T4' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10665 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DCHM_BPT4 _struct_ref.pdbx_db_accession P08773 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MISDSMTVEEIRLHLGLALKEKDFVVDKTGVKTIEIIGASFVADEPFIFGALNDEYIQRELEWYKSKSLFVKDIPGETPK IWQQVASSKGEINSNYGWAIWSEDNYAQYDMCLAELGQNPDSRRGIMIYTRPSMQFDYNKDGMSDFMCTNTVQYLIRDKK INAVVNMRSNDVVFGFRNDYAWQKYVLDKLVSDLNAGDSTRQYKAGSIIWNVGSLHVYSRHFYLVDHWWKTGETHISKKD YVGKYA ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6A9A _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 246 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P08773 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 246 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 246 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6A9A SER A 148 ? UNP P08773 CYS 148 'engineered mutation' 148 1 1 6A9A ASN A 179 ? UNP P08773 ASP 179 'engineered mutation' 179 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DCM non-polymer . "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 IOD non-polymer . 'IODIDE ION' ? 'I -1' 126.904 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THG non-polymer . '(6S)-5,6,7,8-TETRAHYDROFOLATE' ? 'C19 H23 N7 O6' 445.429 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6A9A _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.67 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 54.02 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details 'Tris-HCl pH 8.0, Sodium citrate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-04-23 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9796 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PAL/PLS BEAMLINE 5C (4A)' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9796 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline '5C (4A)' _diffrn_source.pdbx_synchrotron_site PAL/PLS # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 6A9A _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 1.900 _reflns.number_obs 24596 _reflns.number_all ? _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.12100 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 6.8000 _reflns.B_iso_Wilson_estimate 22.00 _reflns.pdbx_redundancy 7.100 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 1.93 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.64000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 7.30 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 6A9A _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 24526 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.340 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 37.61 _refine.ls_d_res_high 1.90 _refine.ls_percent_reflns_obs 99.8 _refine.ls_R_factor_obs 0.155 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.153 _refine.ls_R_factor_R_free 0.187 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 8.130 _refine.ls_number_reflns_R_free 1994 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 26.41 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 1B5D _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.180 _refine.pdbx_overall_phase_error 17.800 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2009 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 53 _refine_hist.number_atoms_solvent 255 _refine_hist.number_atoms_total 2317 _refine_hist.d_res_high 1.90 _refine_hist.d_res_low 37.61 # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all 'X-RAY DIFFRACTION' . 1.9000 1.9475 1599 0.1951 100.00 0.2404 . . 141 . . 'X-RAY DIFFRACTION' . 1.9475 2.0002 1569 0.1706 100.00 0.2497 . . 139 . . 'X-RAY DIFFRACTION' . 2.0002 2.0590 1561 0.1651 100.00 0.2299 . . 138 . . 'X-RAY DIFFRACTION' . 2.0590 2.1255 1609 0.1587 100.00 0.2166 . . 143 . . 'X-RAY DIFFRACTION' . 2.1255 2.2015 1608 0.1467 100.00 0.2104 . . 142 . . 'X-RAY DIFFRACTION' . 2.2015 2.2896 1590 0.1452 100.00 0.1844 . . 141 . . 'X-RAY DIFFRACTION' . 2.2896 2.3938 1597 0.1409 100.00 0.1864 . . 141 . . 'X-RAY DIFFRACTION' . 2.3938 2.5200 1594 0.1487 100.00 0.1926 . . 142 . . 'X-RAY DIFFRACTION' . 2.5200 2.6778 1602 0.1579 100.00 0.1800 . . 141 . . 'X-RAY DIFFRACTION' . 2.6778 2.8845 1613 0.1627 100.00 0.1921 . . 143 . . 'X-RAY DIFFRACTION' . 2.8845 3.1746 1619 0.1527 100.00 0.2020 . . 144 . . 'X-RAY DIFFRACTION' . 3.1746 3.6337 1628 0.1410 100.00 0.1808 . . 143 . . 'X-RAY DIFFRACTION' . 3.6337 4.5768 1627 0.1345 99.00 0.1472 . . 144 . . 'X-RAY DIFFRACTION' . 4.5768 37.6204 1716 0.1656 99.00 0.1799 . . 152 . . # _struct.entry_id 6A9A _struct.title 'Ternary complex crystal structure of dCH with dCMP and THF' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6A9A _struct_keywords.text 'pyrimidine hydroxymethylase, TRANSFERASE' _struct_keywords.pdbx_keywords TRANSFERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 MET A 1 ? SER A 5 ? MET A 1 SER A 5 5 ? 5 HELX_P HELX_P2 AA2 THR A 7 ? GLU A 21 ? THR A 7 GLU A 21 1 ? 15 HELX_P HELX_P3 AA3 ASN A 53 ? LYS A 67 ? ASN A 53 LYS A 67 1 ? 15 HELX_P HELX_P4 AA4 PHE A 70 ? ILE A 74 ? PHE A 70 ILE A 74 5 ? 5 HELX_P HELX_P5 AA5 PRO A 79 ? ALA A 86 ? PRO A 79 ALA A 86 1 ? 8 HELX_P HELX_P6 AA6 ASN A 95 ? SER A 102 ? ASN A 95 SER A 102 1 ? 8 HELX_P HELX_P7 AA7 GLU A 103 ? TYR A 106 ? GLU A 103 TYR A 106 5 ? 4 HELX_P HELX_P8 AA8 ALA A 107 ? ASN A 119 ? ALA A 107 ASN A 119 1 ? 13 HELX_P HELX_P9 AA9 SER A 133 ? TYR A 138 ? SER A 133 TYR A 138 1 ? 6 HELX_P HELX_P10 AB1 ASN A 139 ? MET A 143 ? ASN A 139 MET A 143 5 ? 5 HELX_P HELX_P11 AB2 PHE A 174 ? ASP A 198 ? PHE A 174 ASP A 198 1 ? 25 HELX_P HELX_P12 AB3 HIS A 221 ? GLY A 232 ? HIS A 221 GLY A 232 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 6 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 VAL A 25 ? VAL A 26 ? VAL A 25 VAL A 26 AA1 2 LYS A 32 ? VAL A 42 ? LYS A 32 VAL A 42 AA1 3 LYS A 204 ? TYR A 218 ? LYS A 204 TYR A 218 AA1 4 LYS A 160 ? ASP A 171 ? LYS A 160 ASP A 171 AA1 5 THR A 149 ? ARG A 157 ? THR A 149 ARG A 157 AA1 6 ILE A 126 ? MET A 127 ? ILE A 126 MET A 127 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N VAL A 25 ? N VAL A 25 O THR A 33 ? O THR A 33 AA1 2 3 N PHE A 41 ? N PHE A 41 O TRP A 210 ? O TRP A 210 AA1 3 4 O ASN A 211 ? O ASN A 211 N MET A 167 ? N MET A 167 AA1 4 5 O ASN A 166 ? O ASN A 166 N THR A 151 ? N THR A 151 AA1 5 6 O VAL A 152 ? O VAL A 152 N MET A 127 ? N MET A 127 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A DCM 302 ? 16 'binding site for residue DCM A 302' AC2 Software A THG 303 ? 20 'binding site for residue THG A 303' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 16 LYS A 28 ? LYS A 28 . ? 1_555 ? 2 AC1 16 TYR A 96 ? TYR A 96 . ? 1_555 ? 3 AC1 16 ARG A 123 ? ARG A 123 . ? 2_755 ? 4 AC1 16 ARG A 124 ? ARG A 124 . ? 2_755 ? 5 AC1 16 SER A 148 ? SER A 148 . ? 1_555 ? 6 AC1 16 ARG A 168 ? ARG A 168 . ? 1_555 ? 7 AC1 16 SER A 169 ? SER A 169 . ? 1_555 ? 8 AC1 16 ASN A 170 ? ASN A 170 . ? 1_555 ? 9 AC1 16 ASP A 171 ? ASP A 171 . ? 1_555 ? 10 AC1 16 GLY A 175 ? GLY A 175 . ? 1_555 ? 11 AC1 16 ASN A 179 ? ASN A 179 . ? 1_555 ? 12 AC1 16 HIS A 216 ? HIS A 216 . ? 1_555 ? 13 AC1 16 TYR A 218 ? TYR A 218 . ? 1_555 ? 14 AC1 16 THG D . ? THG A 303 . ? 1_555 ? 15 AC1 16 HOH E . ? HOH A 408 . ? 1_555 ? 16 AC1 16 HOH E . ? HOH A 501 . ? 1_555 ? 17 AC2 20 ASN A 53 ? ASN A 53 . ? 1_555 ? 18 AC2 20 TYR A 56 ? TYR A 56 . ? 1_555 ? 19 AC2 20 ARG A 59 ? ARG A 59 . ? 1_555 ? 20 AC2 20 PRO A 79 ? PRO A 79 . ? 1_555 ? 21 AC2 20 TRP A 82 ? TRP A 82 . ? 1_555 ? 22 AC2 20 PHE A 174 ? PHE A 174 . ? 1_555 ? 23 AC2 20 ARG A 177 ? ARG A 177 . ? 1_555 ? 24 AC2 20 ASN A 178 ? ASN A 178 . ? 1_555 ? 25 AC2 20 TYR A 218 ? TYR A 218 . ? 1_555 ? 26 AC2 20 DCM C . ? DCM A 302 . ? 1_555 ? 27 AC2 20 HOH E . ? HOH A 401 . ? 1_555 ? 28 AC2 20 HOH E . ? HOH A 402 . ? 1_555 ? 29 AC2 20 HOH E . ? HOH A 403 . ? 1_555 ? 30 AC2 20 HOH E . ? HOH A 404 . ? 1_555 ? 31 AC2 20 HOH E . ? HOH A 405 . ? 1_555 ? 32 AC2 20 HOH E . ? HOH A 410 . ? 1_555 ? 33 AC2 20 HOH E . ? HOH A 413 . ? 1_555 ? 34 AC2 20 HOH E . ? HOH A 414 . ? 1_555 ? 35 AC2 20 HOH E . ? HOH A 415 . ? 1_555 ? 36 AC2 20 HOH E . ? HOH A 473 . ? 1_555 ? # _atom_sites.entry_id 6A9A _atom_sites.fract_transf_matrix[1][1] 0.019002 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013293 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006490 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H I N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 ILE 2 2 2 ILE ILE A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 ASP 4 4 4 ASP ASP A . n A 1 5 SER 5 5 5 SER SER A . n A 1 6 MET 6 6 6 MET MET A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 VAL 8 8 8 VAL VAL A . n A 1 9 GLU 9 9 9 GLU GLU A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 ILE 11 11 11 ILE ILE A . n A 1 12 ARG 12 12 12 ARG ARG A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 HIS 14 14 14 HIS HIS A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 LYS 20 20 20 LYS LYS A . n A 1 21 GLU 21 21 21 GLU GLU A . n A 1 22 LYS 22 22 22 LYS LYS A . n A 1 23 ASP 23 23 23 ASP ASP A . n A 1 24 PHE 24 24 24 PHE PHE A . n A 1 25 VAL 25 25 25 VAL VAL A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 ASP 27 27 27 ASP ASP A . n A 1 28 LYS 28 28 28 LYS LYS A . n A 1 29 THR 29 29 29 THR THR A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 VAL 31 31 31 VAL VAL A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 THR 33 33 33 THR THR A . n A 1 34 ILE 34 34 34 ILE ILE A . n A 1 35 GLU 35 35 35 GLU GLU A . n A 1 36 ILE 36 36 36 ILE ILE A . n A 1 37 ILE 37 37 37 ILE ILE A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 ALA 39 39 39 ALA ALA A . n A 1 40 SER 40 40 40 SER SER A . n A 1 41 PHE 41 41 41 PHE PHE A . n A 1 42 VAL 42 42 42 VAL VAL A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 ASP 44 44 44 ASP ASP A . n A 1 45 GLU 45 45 45 GLU GLU A . n A 1 46 PRO 46 46 46 PRO PRO A . n A 1 47 PHE 47 47 47 PHE PHE A . n A 1 48 ILE 48 48 48 ILE ILE A . n A 1 49 PHE 49 49 49 PHE PHE A . n A 1 50 GLY 50 50 50 GLY GLY A . n A 1 51 ALA 51 51 51 ALA ALA A . n A 1 52 LEU 52 52 52 LEU LEU A . n A 1 53 ASN 53 53 53 ASN ASN A . n A 1 54 ASP 54 54 54 ASP ASP A . n A 1 55 GLU 55 55 55 GLU GLU A . n A 1 56 TYR 56 56 56 TYR TYR A . n A 1 57 ILE 57 57 57 ILE ILE A . n A 1 58 GLN 58 58 58 GLN GLN A . n A 1 59 ARG 59 59 59 ARG ARG A . n A 1 60 GLU 60 60 60 GLU GLU A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 GLU 62 62 62 GLU GLU A . n A 1 63 TRP 63 63 63 TRP TRP A . n A 1 64 TYR 64 64 64 TYR TYR A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 SER 66 66 66 SER SER A . n A 1 67 LYS 67 67 67 LYS LYS A . n A 1 68 SER 68 68 68 SER SER A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 PHE 70 70 70 PHE PHE A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 LYS 72 72 72 LYS LYS A . n A 1 73 ASP 73 73 73 ASP ASP A . n A 1 74 ILE 74 74 74 ILE ILE A . n A 1 75 PRO 75 75 75 PRO PRO A . n A 1 76 GLY 76 76 76 GLY GLY A . n A 1 77 GLU 77 77 77 GLU GLU A . n A 1 78 THR 78 78 78 THR THR A . n A 1 79 PRO 79 79 79 PRO PRO A . n A 1 80 LYS 80 80 80 LYS LYS A . n A 1 81 ILE 81 81 81 ILE ILE A . n A 1 82 TRP 82 82 82 TRP TRP A . n A 1 83 GLN 83 83 83 GLN GLN A . n A 1 84 GLN 84 84 84 GLN GLN A . n A 1 85 VAL 85 85 85 VAL VAL A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 SER 87 87 87 SER SER A . n A 1 88 SER 88 88 88 SER SER A . n A 1 89 LYS 89 89 89 LYS LYS A . n A 1 90 GLY 90 90 90 GLY GLY A . n A 1 91 GLU 91 91 91 GLU GLU A . n A 1 92 ILE 92 92 92 ILE ILE A . n A 1 93 ASN 93 93 93 ASN ASN A . n A 1 94 SER 94 94 94 SER SER A . n A 1 95 ASN 95 95 95 ASN ASN A . n A 1 96 TYR 96 96 96 TYR TYR A . n A 1 97 GLY 97 97 97 GLY GLY A . n A 1 98 TRP 98 98 98 TRP TRP A . n A 1 99 ALA 99 99 99 ALA ALA A . n A 1 100 ILE 100 100 100 ILE ILE A . n A 1 101 TRP 101 101 101 TRP TRP A . n A 1 102 SER 102 102 102 SER SER A . n A 1 103 GLU 103 103 103 GLU GLU A . n A 1 104 ASP 104 104 104 ASP ASP A . n A 1 105 ASN 105 105 105 ASN ASN A . n A 1 106 TYR 106 106 106 TYR TYR A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 GLN 108 108 108 GLN GLN A . n A 1 109 TYR 109 109 109 TYR TYR A . n A 1 110 ASP 110 110 110 ASP ASP A . n A 1 111 MET 111 111 111 MET MET A . n A 1 112 CYS 112 112 112 CYS CYS A . n A 1 113 LEU 113 113 113 LEU LEU A . n A 1 114 ALA 114 114 114 ALA ALA A . n A 1 115 GLU 115 115 115 GLU GLU A . n A 1 116 LEU 116 116 116 LEU LEU A . n A 1 117 GLY 117 117 117 GLY GLY A . n A 1 118 GLN 118 118 118 GLN GLN A . n A 1 119 ASN 119 119 119 ASN ASN A . n A 1 120 PRO 120 120 120 PRO PRO A . n A 1 121 ASP 121 121 121 ASP ASP A . n A 1 122 SER 122 122 122 SER SER A . n A 1 123 ARG 123 123 123 ARG ARG A . n A 1 124 ARG 124 124 124 ARG ARG A . n A 1 125 GLY 125 125 125 GLY GLY A . n A 1 126 ILE 126 126 126 ILE ILE A . n A 1 127 MET 127 127 127 MET MET A . n A 1 128 ILE 128 128 128 ILE ILE A . n A 1 129 TYR 129 129 129 TYR TYR A . n A 1 130 THR 130 130 130 THR THR A . n A 1 131 ARG 131 131 131 ARG ARG A . n A 1 132 PRO 132 132 132 PRO PRO A . n A 1 133 SER 133 133 133 SER SER A . n A 1 134 MET 134 134 134 MET MET A . n A 1 135 GLN 135 135 135 GLN GLN A . n A 1 136 PHE 136 136 136 PHE PHE A . n A 1 137 ASP 137 137 137 ASP ASP A . n A 1 138 TYR 138 138 138 TYR TYR A . n A 1 139 ASN 139 139 139 ASN ASN A . n A 1 140 LYS 140 140 140 LYS LYS A . n A 1 141 ASP 141 141 141 ASP ASP A . n A 1 142 GLY 142 142 142 GLY GLY A . n A 1 143 MET 143 143 143 MET MET A . n A 1 144 SER 144 144 144 SER SER A . n A 1 145 ASP 145 145 145 ASP ASP A . n A 1 146 PHE 146 146 146 PHE PHE A . n A 1 147 MET 147 147 147 MET MET A . n A 1 148 SER 148 148 148 SER SER A . n A 1 149 THR 149 149 149 THR THR A . n A 1 150 ASN 150 150 150 ASN ASN A . n A 1 151 THR 151 151 151 THR THR A . n A 1 152 VAL 152 152 152 VAL VAL A . n A 1 153 GLN 153 153 153 GLN GLN A . n A 1 154 TYR 154 154 154 TYR TYR A . n A 1 155 LEU 155 155 155 LEU LEU A . n A 1 156 ILE 156 156 156 ILE ILE A . n A 1 157 ARG 157 157 157 ARG ARG A . n A 1 158 ASP 158 158 158 ASP ASP A . n A 1 159 LYS 159 159 159 LYS LYS A . n A 1 160 LYS 160 160 160 LYS LYS A . n A 1 161 ILE 161 161 161 ILE ILE A . n A 1 162 ASN 162 162 162 ASN ASN A . n A 1 163 ALA 163 163 163 ALA ALA A . n A 1 164 VAL 164 164 164 VAL VAL A . n A 1 165 VAL 165 165 165 VAL VAL A . n A 1 166 ASN 166 166 166 ASN ASN A . n A 1 167 MET 167 167 167 MET MET A . n A 1 168 ARG 168 168 168 ARG ARG A . n A 1 169 SER 169 169 169 SER SER A . n A 1 170 ASN 170 170 170 ASN ASN A . n A 1 171 ASP 171 171 171 ASP ASP A . n A 1 172 VAL 172 172 172 VAL VAL A . n A 1 173 VAL 173 173 173 VAL VAL A . n A 1 174 PHE 174 174 174 PHE PHE A . n A 1 175 GLY 175 175 175 GLY GLY A . n A 1 176 PHE 176 176 176 PHE PHE A . n A 1 177 ARG 177 177 177 ARG ARG A . n A 1 178 ASN 178 178 178 ASN ASN A . n A 1 179 ASN 179 179 179 ASN ASN A . n A 1 180 TYR 180 180 180 TYR TYR A . n A 1 181 ALA 181 181 181 ALA ALA A . n A 1 182 TRP 182 182 182 TRP TRP A . n A 1 183 GLN 183 183 183 GLN GLN A . n A 1 184 LYS 184 184 184 LYS LYS A . n A 1 185 TYR 185 185 185 TYR TYR A . n A 1 186 VAL 186 186 186 VAL VAL A . n A 1 187 LEU 187 187 187 LEU LEU A . n A 1 188 ASP 188 188 188 ASP ASP A . n A 1 189 LYS 189 189 189 LYS LYS A . n A 1 190 LEU 190 190 190 LEU LEU A . n A 1 191 VAL 191 191 191 VAL VAL A . n A 1 192 SER 192 192 192 SER SER A . n A 1 193 ASP 193 193 193 ASP ASP A . n A 1 194 LEU 194 194 194 LEU LEU A . n A 1 195 ASN 195 195 195 ASN ASN A . n A 1 196 ALA 196 196 196 ALA ALA A . n A 1 197 GLY 197 197 197 GLY GLY A . n A 1 198 ASP 198 198 198 ASP ASP A . n A 1 199 SER 199 199 199 SER SER A . n A 1 200 THR 200 200 200 THR THR A . n A 1 201 ARG 201 201 201 ARG ARG A . n A 1 202 GLN 202 202 202 GLN GLN A . n A 1 203 TYR 203 203 203 TYR TYR A . n A 1 204 LYS 204 204 204 LYS LYS A . n A 1 205 ALA 205 205 205 ALA ALA A . n A 1 206 GLY 206 206 206 GLY GLY A . n A 1 207 SER 207 207 207 SER SER A . n A 1 208 ILE 208 208 208 ILE ILE A . n A 1 209 ILE 209 209 209 ILE ILE A . n A 1 210 TRP 210 210 210 TRP TRP A . n A 1 211 ASN 211 211 211 ASN ASN A . n A 1 212 VAL 212 212 212 VAL VAL A . n A 1 213 GLY 213 213 213 GLY GLY A . n A 1 214 SER 214 214 214 SER SER A . n A 1 215 LEU 215 215 215 LEU LEU A . n A 1 216 HIS 216 216 216 HIS HIS A . n A 1 217 VAL 217 217 217 VAL VAL A . n A 1 218 TYR 218 218 218 TYR TYR A . n A 1 219 SER 219 219 219 SER SER A . n A 1 220 ARG 220 220 220 ARG ARG A . n A 1 221 HIS 221 221 221 HIS HIS A . n A 1 222 PHE 222 222 222 PHE PHE A . n A 1 223 TYR 223 223 223 TYR TYR A . n A 1 224 LEU 224 224 224 LEU LEU A . n A 1 225 VAL 225 225 225 VAL VAL A . n A 1 226 ASP 226 226 226 ASP ASP A . n A 1 227 HIS 227 227 227 HIS HIS A . n A 1 228 TRP 228 228 228 TRP TRP A . n A 1 229 TRP 229 229 229 TRP TRP A . n A 1 230 LYS 230 230 230 LYS LYS A . n A 1 231 THR 231 231 231 THR THR A . n A 1 232 GLY 232 232 232 GLY GLY A . n A 1 233 GLU 233 233 233 GLU GLU A . n A 1 234 THR 234 234 234 THR THR A . n A 1 235 HIS 235 235 235 HIS HIS A . n A 1 236 ILE 236 236 236 ILE ILE A . n A 1 237 SER 237 237 237 SER SER A . n A 1 238 LYS 238 238 238 LYS LYS A . n A 1 239 LYS 239 239 239 LYS LYS A . n A 1 240 ASP 240 240 240 ASP ASP A . n A 1 241 TYR 241 241 241 TYR TYR A . n A 1 242 VAL 242 242 242 VAL VAL A . n A 1 243 GLY 243 243 243 GLY GLY A . n A 1 244 LYS 244 244 244 LYS LYS A . n A 1 245 TYR 245 245 245 TYR TYR A . n A 1 246 ALA 246 246 246 ALA ALA A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 IOD 1 301 301 IOD IOD A . C 3 DCM 1 302 302 DCM DCM A . D 4 THG 1 303 303 THG THG A . E 5 HOH 1 401 401 HOH HOH A . E 5 HOH 2 402 402 HOH HOH A . E 5 HOH 3 403 403 HOH HOH A . E 5 HOH 4 404 404 HOH HOH A . E 5 HOH 5 405 405 HOH HOH A . E 5 HOH 6 406 406 HOH HOH A . E 5 HOH 7 407 407 HOH HOH A . E 5 HOH 8 408 408 HOH HOH A . E 5 HOH 9 409 409 HOH HOH A . E 5 HOH 10 410 410 HOH HOH A . E 5 HOH 11 411 411 HOH HOH A . E 5 HOH 12 412 412 HOH HOH A . E 5 HOH 13 413 413 HOH HOH A . E 5 HOH 14 414 414 HOH HOH A . E 5 HOH 15 415 415 HOH HOH A . E 5 HOH 16 416 416 HOH HOH A . E 5 HOH 17 417 417 HOH HOH A . E 5 HOH 18 418 418 HOH HOH A . E 5 HOH 19 419 419 HOH HOH A . E 5 HOH 20 420 420 HOH HOH A . E 5 HOH 21 421 421 HOH HOH A . E 5 HOH 22 422 422 HOH HOH A . E 5 HOH 23 423 423 HOH HOH A . E 5 HOH 24 424 424 HOH HOH A . E 5 HOH 25 425 425 HOH HOH A . E 5 HOH 26 426 426 HOH HOH A . E 5 HOH 27 427 427 HOH HOH A . E 5 HOH 28 428 428 HOH HOH A . E 5 HOH 29 429 429 HOH HOH A . E 5 HOH 30 430 430 HOH HOH A . E 5 HOH 31 431 431 HOH HOH A . E 5 HOH 32 432 432 HOH HOH A . E 5 HOH 33 433 433 HOH HOH A . E 5 HOH 34 434 434 HOH HOH A . E 5 HOH 35 435 435 HOH HOH A . E 5 HOH 36 436 436 HOH HOH A . E 5 HOH 37 437 437 HOH HOH A . E 5 HOH 38 438 438 HOH HOH A . E 5 HOH 39 439 439 HOH HOH A . E 5 HOH 40 440 440 HOH HOH A . E 5 HOH 41 441 441 HOH HOH A . E 5 HOH 42 442 442 HOH HOH A . E 5 HOH 43 443 443 HOH HOH A . E 5 HOH 44 444 444 HOH HOH A . E 5 HOH 45 445 445 HOH HOH A . E 5 HOH 46 446 446 HOH HOH A . E 5 HOH 47 447 447 HOH HOH A . E 5 HOH 48 448 448 HOH HOH A . E 5 HOH 49 449 449 HOH HOH A . E 5 HOH 50 450 450 HOH HOH A . E 5 HOH 51 451 451 HOH HOH A . E 5 HOH 52 452 452 HOH HOH A . E 5 HOH 53 453 453 HOH HOH A . E 5 HOH 54 454 454 HOH HOH A . E 5 HOH 55 455 455 HOH HOH A . E 5 HOH 56 456 456 HOH HOH A . E 5 HOH 57 457 457 HOH HOH A . E 5 HOH 58 458 458 HOH HOH A . E 5 HOH 59 459 459 HOH HOH A . E 5 HOH 60 460 460 HOH HOH A . E 5 HOH 61 461 461 HOH HOH A . E 5 HOH 62 462 462 HOH HOH A . E 5 HOH 63 463 463 HOH HOH A . E 5 HOH 64 464 464 HOH HOH A . E 5 HOH 65 465 465 HOH HOH A . E 5 HOH 66 466 466 HOH HOH A . E 5 HOH 67 467 467 HOH HOH A . E 5 HOH 68 468 468 HOH HOH A . E 5 HOH 69 469 469 HOH HOH A . E 5 HOH 70 470 470 HOH HOH A . E 5 HOH 71 471 471 HOH HOH A . E 5 HOH 72 472 472 HOH HOH A . E 5 HOH 73 473 473 HOH HOH A . E 5 HOH 74 474 474 HOH HOH A . E 5 HOH 75 475 475 HOH HOH A . E 5 HOH 76 476 476 HOH HOH A . E 5 HOH 77 477 477 HOH HOH A . E 5 HOH 78 478 478 HOH HOH A . E 5 HOH 79 479 479 HOH HOH A . E 5 HOH 80 480 480 HOH HOH A . E 5 HOH 81 481 481 HOH HOH A . E 5 HOH 82 482 482 HOH HOH A . E 5 HOH 83 483 483 HOH HOH A . E 5 HOH 84 484 484 HOH HOH A . E 5 HOH 85 485 485 HOH HOH A . E 5 HOH 86 486 486 HOH HOH A . E 5 HOH 87 487 487 HOH HOH A . E 5 HOH 88 488 488 HOH HOH A . E 5 HOH 89 489 489 HOH HOH A . E 5 HOH 90 490 490 HOH HOH A . E 5 HOH 91 491 491 HOH HOH A . E 5 HOH 92 492 492 HOH HOH A . E 5 HOH 93 493 493 HOH HOH A . E 5 HOH 94 494 494 HOH HOH A . E 5 HOH 95 495 495 HOH HOH A . E 5 HOH 96 496 496 HOH HOH A . E 5 HOH 97 497 497 HOH HOH A . E 5 HOH 98 498 498 HOH HOH A . E 5 HOH 99 499 499 HOH HOH A . E 5 HOH 100 500 500 HOH HOH A . E 5 HOH 101 501 501 HOH HOH A . E 5 HOH 102 502 502 HOH HOH A . E 5 HOH 103 503 503 HOH HOH A . E 5 HOH 104 504 504 HOH HOH A . E 5 HOH 105 505 505 HOH HOH A . E 5 HOH 106 506 506 HOH HOH A . E 5 HOH 107 507 507 HOH HOH A . E 5 HOH 108 508 508 HOH HOH A . E 5 HOH 109 509 509 HOH HOH A . E 5 HOH 110 510 510 HOH HOH A . E 5 HOH 111 511 511 HOH HOH A . E 5 HOH 112 512 512 HOH HOH A . E 5 HOH 113 513 513 HOH HOH A . E 5 HOH 114 514 514 HOH HOH A . E 5 HOH 115 515 515 HOH HOH A . E 5 HOH 116 516 516 HOH HOH A . E 5 HOH 117 517 517 HOH HOH A . E 5 HOH 118 518 518 HOH HOH A . E 5 HOH 119 519 519 HOH HOH A . E 5 HOH 120 520 520 HOH HOH A . E 5 HOH 121 521 521 HOH HOH A . E 5 HOH 122 522 522 HOH HOH A . E 5 HOH 123 523 523 HOH HOH A . E 5 HOH 124 524 524 HOH HOH A . E 5 HOH 125 525 525 HOH HOH A . E 5 HOH 126 526 526 HOH HOH A . E 5 HOH 127 527 527 HOH HOH A . E 5 HOH 128 528 528 HOH HOH A . E 5 HOH 129 529 529 HOH HOH A . E 5 HOH 130 530 530 HOH HOH A . E 5 HOH 131 531 531 HOH HOH A . E 5 HOH 132 532 532 HOH HOH A . E 5 HOH 133 533 533 HOH HOH A . E 5 HOH 134 534 534 HOH HOH A . E 5 HOH 135 535 535 HOH HOH A . E 5 HOH 136 536 536 HOH HOH A . E 5 HOH 137 537 537 HOH HOH A . E 5 HOH 138 538 538 HOH HOH A . E 5 HOH 139 539 539 HOH HOH A . E 5 HOH 140 540 540 HOH HOH A . E 5 HOH 141 541 541 HOH HOH A . E 5 HOH 142 542 542 HOH HOH A . E 5 HOH 143 543 543 HOH HOH A . E 5 HOH 144 544 544 HOH HOH A . E 5 HOH 145 545 545 HOH HOH A . E 5 HOH 146 546 546 HOH HOH A . E 5 HOH 147 547 547 HOH HOH A . E 5 HOH 148 548 548 HOH HOH A . E 5 HOH 149 549 549 HOH HOH A . E 5 HOH 150 550 550 HOH HOH A . E 5 HOH 151 551 551 HOH HOH A . E 5 HOH 152 552 552 HOH HOH A . E 5 HOH 153 553 553 HOH HOH A . E 5 HOH 154 554 554 HOH HOH A . E 5 HOH 155 555 555 HOH HOH A . E 5 HOH 156 556 556 HOH HOH A . E 5 HOH 157 557 557 HOH HOH A . E 5 HOH 158 558 558 HOH HOH A . E 5 HOH 159 559 559 HOH HOH A . E 5 HOH 160 560 560 HOH HOH A . E 5 HOH 161 561 561 HOH HOH A . E 5 HOH 162 562 562 HOH HOH A . E 5 HOH 163 563 563 HOH HOH A . E 5 HOH 164 564 564 HOH HOH A . E 5 HOH 165 565 565 HOH HOH A . E 5 HOH 166 566 566 HOH HOH A . E 5 HOH 167 567 567 HOH HOH A . E 5 HOH 168 568 568 HOH HOH A . E 5 HOH 169 569 569 HOH HOH A . E 5 HOH 170 570 570 HOH HOH A . E 5 HOH 171 571 571 HOH HOH A . E 5 HOH 172 572 572 HOH HOH A . E 5 HOH 173 573 573 HOH HOH A . E 5 HOH 174 574 574 HOH HOH A . E 5 HOH 175 575 575 HOH HOH A . E 5 HOH 176 576 576 HOH HOH A . E 5 HOH 177 577 577 HOH HOH A . E 5 HOH 178 578 578 HOH HOH A . E 5 HOH 179 579 579 HOH HOH A . E 5 HOH 180 580 580 HOH HOH A . E 5 HOH 181 581 581 HOH HOH A . E 5 HOH 182 582 582 HOH HOH A . E 5 HOH 183 583 583 HOH HOH A . E 5 HOH 184 584 584 HOH HOH A . E 5 HOH 185 585 585 HOH HOH A . E 5 HOH 186 586 586 HOH HOH A . E 5 HOH 187 587 587 HOH HOH A . E 5 HOH 188 588 588 HOH HOH A . E 5 HOH 189 589 589 HOH HOH A . E 5 HOH 190 590 590 HOH HOH A . E 5 HOH 191 591 591 HOH HOH A . E 5 HOH 192 592 592 HOH HOH A . E 5 HOH 193 593 593 HOH HOH A . E 5 HOH 194 594 594 HOH HOH A . E 5 HOH 195 595 595 HOH HOH A . E 5 HOH 196 596 596 HOH HOH A . E 5 HOH 197 597 597 HOH HOH A . E 5 HOH 198 598 598 HOH HOH A . E 5 HOH 199 599 599 HOH HOH A . E 5 HOH 200 600 600 HOH HOH A . E 5 HOH 201 601 601 HOH HOH A . E 5 HOH 202 602 602 HOH HOH A . E 5 HOH 203 603 603 HOH HOH A . E 5 HOH 204 604 604 HOH HOH A . E 5 HOH 205 605 605 HOH HOH A . E 5 HOH 206 606 606 HOH HOH A . E 5 HOH 207 607 607 HOH HOH A . E 5 HOH 208 608 608 HOH HOH A . E 5 HOH 209 609 609 HOH HOH A . E 5 HOH 210 610 610 HOH HOH A . E 5 HOH 211 611 611 HOH HOH A . E 5 HOH 212 612 612 HOH HOH A . E 5 HOH 213 613 613 HOH HOH A . E 5 HOH 214 614 614 HOH HOH A . E 5 HOH 215 615 615 HOH HOH A . E 5 HOH 216 616 616 HOH HOH A . E 5 HOH 217 617 617 HOH HOH A . E 5 HOH 218 618 618 HOH HOH A . E 5 HOH 219 619 619 HOH HOH A . E 5 HOH 220 620 620 HOH HOH A . E 5 HOH 221 621 621 HOH HOH A . E 5 HOH 222 622 622 HOH HOH A . E 5 HOH 223 623 623 HOH HOH A . E 5 HOH 224 624 624 HOH HOH A . E 5 HOH 225 625 625 HOH HOH A . E 5 HOH 226 626 626 HOH HOH A . E 5 HOH 227 627 627 HOH HOH A . E 5 HOH 228 628 628 HOH HOH A . E 5 HOH 229 629 629 HOH HOH A . E 5 HOH 230 630 630 HOH HOH A . E 5 HOH 231 631 631 HOH HOH A . E 5 HOH 232 632 632 HOH HOH A . E 5 HOH 233 633 633 HOH HOH A . E 5 HOH 234 634 634 HOH HOH A . E 5 HOH 235 635 635 HOH HOH A . E 5 HOH 236 636 636 HOH HOH A . E 5 HOH 237 637 637 HOH HOH A . E 5 HOH 238 638 638 HOH HOH A . E 5 HOH 239 639 639 HOH HOH A . E 5 HOH 240 640 640 HOH HOH A . E 5 HOH 241 641 641 HOH HOH A . E 5 HOH 242 642 642 HOH HOH A . E 5 HOH 243 643 643 HOH HOH A . E 5 HOH 244 644 644 HOH HOH A . E 5 HOH 245 645 645 HOH HOH A . E 5 HOH 246 646 646 HOH HOH A . E 5 HOH 247 647 647 HOH HOH A . E 5 HOH 248 648 648 HOH HOH A . E 5 HOH 249 649 649 HOH HOH A . E 5 HOH 250 650 650 HOH HOH A . E 5 HOH 251 651 651 HOH HOH A . E 5 HOH 252 652 652 HOH HOH A . E 5 HOH 253 653 653 HOH HOH A . E 5 HOH 254 654 654 HOH HOH A . E 5 HOH 255 655 655 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 8260 ? 1 MORE -14 ? 1 'SSA (A^2)' 19190 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_755 -x+2,-y,z -1.0000000000 0.0000000000 0.0000000000 105.2500000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-01-02 2 'Structure model' 2 0 2019-05-15 3 'Structure model' 2 1 2019-07-17 4 'Structure model' 2 2 2023-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Atomic model' 2 2 'Structure model' 'Data collection' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Refinement description' 5 3 'Structure model' 'Data collection' 6 3 'Structure model' 'Database references' 7 4 'Structure model' 'Data collection' 8 4 'Structure model' 'Database references' 9 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_site 2 2 'Structure model' atom_site_anisotrop 3 2 'Structure model' computing 4 2 'Structure model' pdbx_nonpoly_scheme 5 2 'Structure model' pdbx_refine_tls_group 6 2 'Structure model' refine 7 2 'Structure model' refine_hist 8 2 'Structure model' refine_ls_shell 9 2 'Structure model' reflns 10 2 'Structure model' reflns_shell 11 2 'Structure model' struct_site_gen 12 3 'Structure model' citation 13 3 'Structure model' citation_author 14 4 'Structure model' chem_comp_atom 15 4 'Structure model' chem_comp_bond 16 4 'Structure model' database_2 17 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_atom_site.B_iso_or_equiv' 2 2 'Structure model' '_atom_site.Cartn_x' 3 2 'Structure model' '_atom_site.Cartn_y' 4 2 'Structure model' '_atom_site.Cartn_z' 5 2 'Structure model' '_atom_site_anisotrop.U[1][1]' 6 2 'Structure model' '_atom_site_anisotrop.U[1][2]' 7 2 'Structure model' '_atom_site_anisotrop.U[1][3]' 8 2 'Structure model' '_atom_site_anisotrop.U[2][2]' 9 2 'Structure model' '_atom_site_anisotrop.U[2][3]' 10 2 'Structure model' '_atom_site_anisotrop.U[3][3]' 11 2 'Structure model' '_pdbx_nonpoly_scheme.auth_seq_num' 12 2 'Structure model' '_refine.B_iso_max' 13 2 'Structure model' '_refine.B_iso_mean' 14 2 'Structure model' '_refine.B_iso_min' 15 2 'Structure model' '_refine.ls_R_factor_R_free' 16 2 'Structure model' '_refine.ls_R_factor_R_work' 17 2 'Structure model' '_refine.ls_R_factor_obs' 18 2 'Structure model' '_refine.ls_d_res_low' 19 2 'Structure model' '_refine.ls_number_reflns_R_work' 20 2 'Structure model' '_refine_hist.cycle_id' 21 2 'Structure model' '_refine_hist.d_res_low' 22 2 'Structure model' '_refine_hist.pdbx_B_iso_mean_ligand' 23 2 'Structure model' '_refine_hist.pdbx_B_iso_mean_solvent' 24 2 'Structure model' '_refine_hist.pdbx_number_residues_total' 25 2 'Structure model' '_refine_ls_shell.R_factor_R_free_error' 26 2 'Structure model' '_refine_ls_shell.number_reflns_all' 27 2 'Structure model' '_refine_ls_shell.pdbx_total_number_of_bins_used' 28 2 'Structure model' '_reflns.pdbx_Rpim_I_all' 29 2 'Structure model' '_reflns.pdbx_Rrim_I_all' 30 2 'Structure model' '_reflns.pdbx_chi_squared' 31 2 'Structure model' '_reflns.pdbx_number_measured_all' 32 2 'Structure model' '_struct_site_gen.auth_seq_id' 33 3 'Structure model' '_citation.country' 34 3 'Structure model' '_citation.journal_abbrev' 35 3 'Structure model' '_citation.journal_id_CSD' 36 3 'Structure model' '_citation.journal_id_ISSN' 37 3 'Structure model' '_citation.journal_volume' 38 3 'Structure model' '_citation.page_first' 39 3 'Structure model' '_citation.page_last' 40 3 'Structure model' '_citation.pdbx_database_id_DOI' 41 3 'Structure model' '_citation.pdbx_database_id_PubMed' 42 3 'Structure model' '_citation.title' 43 3 'Structure model' '_citation.year' 44 4 'Structure model' '_database_2.pdbx_DOI' 45 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 60.4391 _pdbx_refine_tls.origin_y 10.2140 _pdbx_refine_tls.origin_z 177.7826 _pdbx_refine_tls.T[1][1] 0.0970 _pdbx_refine_tls.T[2][2] 0.0943 _pdbx_refine_tls.T[3][3] 0.0884 _pdbx_refine_tls.T[1][2] -0.0041 _pdbx_refine_tls.T[1][3] 0.0218 _pdbx_refine_tls.T[2][3] 0.0049 _pdbx_refine_tls.L[1][1] 0.5041 _pdbx_refine_tls.L[2][2] 0.6044 _pdbx_refine_tls.L[3][3] 0.4490 _pdbx_refine_tls.L[1][2] 0.1897 _pdbx_refine_tls.L[1][3] 0.1895 _pdbx_refine_tls.L[2][3] 0.0745 _pdbx_refine_tls.S[1][1] -0.0418 _pdbx_refine_tls.S[1][2] 0.0244 _pdbx_refine_tls.S[1][3] 0.0543 _pdbx_refine_tls.S[2][1] -0.1067 _pdbx_refine_tls.S[2][2] 0.0037 _pdbx_refine_tls.S[2][3] -0.0623 _pdbx_refine_tls.S[3][1] -0.0527 _pdbx_refine_tls.S[3][2] 0.0624 _pdbx_refine_tls.S[3][3] -0.0000 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ALL # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.13_2998 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALEPACK ? ? ? . 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.24 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 4 ? ? -141.84 54.64 2 1 ILE A 48 ? ? -109.60 -62.39 3 1 ASN A 53 ? ? -153.68 70.82 4 1 TYR A 106 ? ? 71.29 34.77 5 1 ASP A 145 ? ? -151.76 77.86 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 653 ? 5.89 . 2 1 O ? A HOH 654 ? 6.40 . 3 1 O ? A HOH 655 ? 6.50 . # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DCM N1 N N N 88 DCM C2 C N N 89 DCM N3 N N N 90 DCM C4 C N N 91 DCM C5 C N N 92 DCM C6 C N N 93 DCM O2 O N N 94 DCM N4 N N N 95 DCM "C1'" C N R 96 DCM "C2'" C N N 97 DCM "C3'" C N S 98 DCM "C4'" C N R 99 DCM "O4'" O N N 100 DCM "O3'" O N N 101 DCM "C5'" C N N 102 DCM "O5'" O N N 103 DCM P P N N 104 DCM O1P O N N 105 DCM O2P O N N 106 DCM O3P O N N 107 DCM H5 H N N 108 DCM H6 H N N 109 DCM HN41 H N N 110 DCM HN42 H N N 111 DCM "H1'" H N N 112 DCM "H2'1" H N N 113 DCM "H2'2" H N N 114 DCM "H3'" H N N 115 DCM "H4'" H N N 116 DCM "HO3'" H N N 117 DCM "H5'1" H N N 118 DCM "H5'2" H N N 119 DCM HOP2 H N N 120 DCM HOP3 H N N 121 GLN N N N N 122 GLN CA C N S 123 GLN C C N N 124 GLN O O N N 125 GLN CB C N N 126 GLN CG C N N 127 GLN CD C N N 128 GLN OE1 O N N 129 GLN NE2 N N N 130 GLN OXT O N N 131 GLN H H N N 132 GLN H2 H N N 133 GLN HA H N N 134 GLN HB2 H N N 135 GLN HB3 H N N 136 GLN HG2 H N N 137 GLN HG3 H N N 138 GLN HE21 H N N 139 GLN HE22 H N N 140 GLN HXT H N N 141 GLU N N N N 142 GLU CA C N S 143 GLU C C N N 144 GLU O O N N 145 GLU CB C N N 146 GLU CG C N N 147 GLU CD C N N 148 GLU OE1 O N N 149 GLU OE2 O N N 150 GLU OXT O N N 151 GLU H H N N 152 GLU H2 H N N 153 GLU HA H N N 154 GLU HB2 H N N 155 GLU HB3 H N N 156 GLU HG2 H N N 157 GLU HG3 H N N 158 GLU HE2 H N N 159 GLU HXT H N N 160 GLY N N N N 161 GLY CA C N N 162 GLY C C N N 163 GLY O O N N 164 GLY OXT O N N 165 GLY H H N N 166 GLY H2 H N N 167 GLY HA2 H N N 168 GLY HA3 H N N 169 GLY HXT H N N 170 HIS N N N N 171 HIS CA C N S 172 HIS C C N N 173 HIS O O N N 174 HIS CB C N N 175 HIS CG C Y N 176 HIS ND1 N Y N 177 HIS CD2 C Y N 178 HIS CE1 C Y N 179 HIS NE2 N Y N 180 HIS OXT O N N 181 HIS H H N N 182 HIS H2 H N N 183 HIS HA H N N 184 HIS HB2 H N N 185 HIS HB3 H N N 186 HIS HD1 H N N 187 HIS HD2 H N N 188 HIS HE1 H N N 189 HIS HE2 H N N 190 HIS HXT H N N 191 HOH O O N N 192 HOH H1 H N N 193 HOH H2 H N N 194 ILE N N N N 195 ILE CA C N S 196 ILE C C N N 197 ILE O O N N 198 ILE CB C N S 199 ILE CG1 C N N 200 ILE CG2 C N N 201 ILE CD1 C N N 202 ILE OXT O N N 203 ILE H H N N 204 ILE H2 H N N 205 ILE HA H N N 206 ILE HB H N N 207 ILE HG12 H N N 208 ILE HG13 H N N 209 ILE HG21 H N N 210 ILE HG22 H N N 211 ILE HG23 H N N 212 ILE HD11 H N N 213 ILE HD12 H N N 214 ILE HD13 H N N 215 ILE HXT H N N 216 IOD I I N N 217 LEU N N N N 218 LEU CA C N S 219 LEU C C N N 220 LEU O O N N 221 LEU CB C N N 222 LEU CG C N N 223 LEU CD1 C N N 224 LEU CD2 C N N 225 LEU OXT O N N 226 LEU H H N N 227 LEU H2 H N N 228 LEU HA H N N 229 LEU HB2 H N N 230 LEU HB3 H N N 231 LEU HG H N N 232 LEU HD11 H N N 233 LEU HD12 H N N 234 LEU HD13 H N N 235 LEU HD21 H N N 236 LEU HD22 H N N 237 LEU HD23 H N N 238 LEU HXT H N N 239 LYS N N N N 240 LYS CA C N S 241 LYS C C N N 242 LYS O O N N 243 LYS CB C N N 244 LYS CG C N N 245 LYS CD C N N 246 LYS CE C N N 247 LYS NZ N N N 248 LYS OXT O N N 249 LYS H H N N 250 LYS H2 H N N 251 LYS HA H N N 252 LYS HB2 H N N 253 LYS HB3 H N N 254 LYS HG2 H N N 255 LYS HG3 H N N 256 LYS HD2 H N N 257 LYS HD3 H N N 258 LYS HE2 H N N 259 LYS HE3 H N N 260 LYS HZ1 H N N 261 LYS HZ2 H N N 262 LYS HZ3 H N N 263 LYS HXT H N N 264 MET N N N N 265 MET CA C N S 266 MET C C N N 267 MET O O N N 268 MET CB C N N 269 MET CG C N N 270 MET SD S N N 271 MET CE C N N 272 MET OXT O N N 273 MET H H N N 274 MET H2 H N N 275 MET HA H N N 276 MET HB2 H N N 277 MET HB3 H N N 278 MET HG2 H N N 279 MET HG3 H N N 280 MET HE1 H N N 281 MET HE2 H N N 282 MET HE3 H N N 283 MET HXT H N N 284 PHE N N N N 285 PHE CA C N S 286 PHE C C N N 287 PHE O O N N 288 PHE CB C N N 289 PHE CG C Y N 290 PHE CD1 C Y N 291 PHE CD2 C Y N 292 PHE CE1 C Y N 293 PHE CE2 C Y N 294 PHE CZ C Y N 295 PHE OXT O N N 296 PHE H H N N 297 PHE H2 H N N 298 PHE HA H N N 299 PHE HB2 H N N 300 PHE HB3 H N N 301 PHE HD1 H N N 302 PHE HD2 H N N 303 PHE HE1 H N N 304 PHE HE2 H N N 305 PHE HZ H N N 306 PHE HXT H N N 307 PRO N N N N 308 PRO CA C N S 309 PRO C C N N 310 PRO O O N N 311 PRO CB C N N 312 PRO CG C N N 313 PRO CD C N N 314 PRO OXT O N N 315 PRO H H N N 316 PRO HA H N N 317 PRO HB2 H N N 318 PRO HB3 H N N 319 PRO HG2 H N N 320 PRO HG3 H N N 321 PRO HD2 H N N 322 PRO HD3 H N N 323 PRO HXT H N N 324 SER N N N N 325 SER CA C N S 326 SER C C N N 327 SER O O N N 328 SER CB C N N 329 SER OG O N N 330 SER OXT O N N 331 SER H H N N 332 SER H2 H N N 333 SER HA H N N 334 SER HB2 H N N 335 SER HB3 H N N 336 SER HG H N N 337 SER HXT H N N 338 THG N3 N Y N 339 THG C2 C Y N 340 THG N1 N Y N 341 THG C8A C Y N 342 THG C4A C Y N 343 THG C4 C Y N 344 THG N8 N N N 345 THG C7 C N N 346 THG C6 C N S 347 THG N5 N N N 348 THG C9 C N N 349 THG N10 N N N 350 THG "C4'" C Y N 351 THG "C3'" C Y N 352 THG "C2'" C Y N 353 THG "C1'" C Y N 354 THG "C6'" C Y N 355 THG "C5'" C Y N 356 THG C11 C N N 357 THG N N N N 358 THG CA C N S 359 THG C C N N 360 THG OX2 O N N 361 THG OX1 O N N 362 THG CB C N N 363 THG CG C N N 364 THG CD C N N 365 THG OE1 O N N 366 THG OE2 O N N 367 THG O11 O N N 368 THG O4 O N N 369 THG N2 N N N 370 THG HN3 H N N 371 THG HN8 H N N 372 THG HC71 H N N 373 THG HC72 H N N 374 THG HC6 H N N 375 THG HN5 H N N 376 THG HC91 H N N 377 THG HC92 H N N 378 THG H10 H N N 379 THG HC3 H N N 380 THG HC2 H N N 381 THG HC61 H N N 382 THG HC5 H N N 383 THG HN H N N 384 THG HCA H N N 385 THG HX2 H N N 386 THG HCB1 H N N 387 THG HCB2 H N N 388 THG HCG1 H N N 389 THG HCG2 H N N 390 THG HE2 H N N 391 THG HN21 H N N 392 THG HN22 H N N 393 THR N N N N 394 THR CA C N S 395 THR C C N N 396 THR O O N N 397 THR CB C N R 398 THR OG1 O N N 399 THR CG2 C N N 400 THR OXT O N N 401 THR H H N N 402 THR H2 H N N 403 THR HA H N N 404 THR HB H N N 405 THR HG1 H N N 406 THR HG21 H N N 407 THR HG22 H N N 408 THR HG23 H N N 409 THR HXT H N N 410 TRP N N N N 411 TRP CA C N S 412 TRP C C N N 413 TRP O O N N 414 TRP CB C N N 415 TRP CG C Y N 416 TRP CD1 C Y N 417 TRP CD2 C Y N 418 TRP NE1 N Y N 419 TRP CE2 C Y N 420 TRP CE3 C Y N 421 TRP CZ2 C Y N 422 TRP CZ3 C Y N 423 TRP CH2 C Y N 424 TRP OXT O N N 425 TRP H H N N 426 TRP H2 H N N 427 TRP HA H N N 428 TRP HB2 H N N 429 TRP HB3 H N N 430 TRP HD1 H N N 431 TRP HE1 H N N 432 TRP HE3 H N N 433 TRP HZ2 H N N 434 TRP HZ3 H N N 435 TRP HH2 H N N 436 TRP HXT H N N 437 TYR N N N N 438 TYR CA C N S 439 TYR C C N N 440 TYR O O N N 441 TYR CB C N N 442 TYR CG C Y N 443 TYR CD1 C Y N 444 TYR CD2 C Y N 445 TYR CE1 C Y N 446 TYR CE2 C Y N 447 TYR CZ C Y N 448 TYR OH O N N 449 TYR OXT O N N 450 TYR H H N N 451 TYR H2 H N N 452 TYR HA H N N 453 TYR HB2 H N N 454 TYR HB3 H N N 455 TYR HD1 H N N 456 TYR HD2 H N N 457 TYR HE1 H N N 458 TYR HE2 H N N 459 TYR HH H N N 460 TYR HXT H N N 461 VAL N N N N 462 VAL CA C N S 463 VAL C C N N 464 VAL O O N N 465 VAL CB C N N 466 VAL CG1 C N N 467 VAL CG2 C N N 468 VAL OXT O N N 469 VAL H H N N 470 VAL H2 H N N 471 VAL HA H N N 472 VAL HB H N N 473 VAL HG11 H N N 474 VAL HG12 H N N 475 VAL HG13 H N N 476 VAL HG21 H N N 477 VAL HG22 H N N 478 VAL HG23 H N N 479 VAL HXT H N N 480 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DCM N1 C2 sing N N 83 DCM N1 C6 sing N N 84 DCM N1 "C1'" sing N N 85 DCM C2 N3 sing N N 86 DCM C2 O2 doub N N 87 DCM N3 C4 doub N N 88 DCM C4 C5 sing N N 89 DCM C4 N4 sing N N 90 DCM C5 C6 doub N N 91 DCM C5 H5 sing N N 92 DCM C6 H6 sing N N 93 DCM N4 HN41 sing N N 94 DCM N4 HN42 sing N N 95 DCM "C1'" "C2'" sing N N 96 DCM "C1'" "O4'" sing N N 97 DCM "C1'" "H1'" sing N N 98 DCM "C2'" "C3'" sing N N 99 DCM "C2'" "H2'1" sing N N 100 DCM "C2'" "H2'2" sing N N 101 DCM "C3'" "C4'" sing N N 102 DCM "C3'" "O3'" sing N N 103 DCM "C3'" "H3'" sing N N 104 DCM "C4'" "O4'" sing N N 105 DCM "C4'" "C5'" sing N N 106 DCM "C4'" "H4'" sing N N 107 DCM "O3'" "HO3'" sing N N 108 DCM "C5'" "O5'" sing N N 109 DCM "C5'" "H5'1" sing N N 110 DCM "C5'" "H5'2" sing N N 111 DCM "O5'" P sing N N 112 DCM P O1P doub N N 113 DCM P O2P sing N N 114 DCM P O3P sing N N 115 DCM O2P HOP2 sing N N 116 DCM O3P HOP3 sing N N 117 GLN N CA sing N N 118 GLN N H sing N N 119 GLN N H2 sing N N 120 GLN CA C sing N N 121 GLN CA CB sing N N 122 GLN CA HA sing N N 123 GLN C O doub N N 124 GLN C OXT sing N N 125 GLN CB CG sing N N 126 GLN CB HB2 sing N N 127 GLN CB HB3 sing N N 128 GLN CG CD sing N N 129 GLN CG HG2 sing N N 130 GLN CG HG3 sing N N 131 GLN CD OE1 doub N N 132 GLN CD NE2 sing N N 133 GLN NE2 HE21 sing N N 134 GLN NE2 HE22 sing N N 135 GLN OXT HXT sing N N 136 GLU N CA sing N N 137 GLU N H sing N N 138 GLU N H2 sing N N 139 GLU CA C sing N N 140 GLU CA CB sing N N 141 GLU CA HA sing N N 142 GLU C O doub N N 143 GLU C OXT sing N N 144 GLU CB CG sing N N 145 GLU CB HB2 sing N N 146 GLU CB HB3 sing N N 147 GLU CG CD sing N N 148 GLU CG HG2 sing N N 149 GLU CG HG3 sing N N 150 GLU CD OE1 doub N N 151 GLU CD OE2 sing N N 152 GLU OE2 HE2 sing N N 153 GLU OXT HXT sing N N 154 GLY N CA sing N N 155 GLY N H sing N N 156 GLY N H2 sing N N 157 GLY CA C sing N N 158 GLY CA HA2 sing N N 159 GLY CA HA3 sing N N 160 GLY C O doub N N 161 GLY C OXT sing N N 162 GLY OXT HXT sing N N 163 HIS N CA sing N N 164 HIS N H sing N N 165 HIS N H2 sing N N 166 HIS CA C sing N N 167 HIS CA CB sing N N 168 HIS CA HA sing N N 169 HIS C O doub N N 170 HIS C OXT sing N N 171 HIS CB CG sing N N 172 HIS CB HB2 sing N N 173 HIS CB HB3 sing N N 174 HIS CG ND1 sing Y N 175 HIS CG CD2 doub Y N 176 HIS ND1 CE1 doub Y N 177 HIS ND1 HD1 sing N N 178 HIS CD2 NE2 sing Y N 179 HIS CD2 HD2 sing N N 180 HIS CE1 NE2 sing Y N 181 HIS CE1 HE1 sing N N 182 HIS NE2 HE2 sing N N 183 HIS OXT HXT sing N N 184 HOH O H1 sing N N 185 HOH O H2 sing N N 186 ILE N CA sing N N 187 ILE N H sing N N 188 ILE N H2 sing N N 189 ILE CA C sing N N 190 ILE CA CB sing N N 191 ILE CA HA sing N N 192 ILE C O doub N N 193 ILE C OXT sing N N 194 ILE CB CG1 sing N N 195 ILE CB CG2 sing N N 196 ILE CB HB sing N N 197 ILE CG1 CD1 sing N N 198 ILE CG1 HG12 sing N N 199 ILE CG1 HG13 sing N N 200 ILE CG2 HG21 sing N N 201 ILE CG2 HG22 sing N N 202 ILE CG2 HG23 sing N N 203 ILE CD1 HD11 sing N N 204 ILE CD1 HD12 sing N N 205 ILE CD1 HD13 sing N N 206 ILE OXT HXT sing N N 207 LEU N CA sing N N 208 LEU N H sing N N 209 LEU N H2 sing N N 210 LEU CA C sing N N 211 LEU CA CB sing N N 212 LEU CA HA sing N N 213 LEU C O doub N N 214 LEU C OXT sing N N 215 LEU CB CG sing N N 216 LEU CB HB2 sing N N 217 LEU CB HB3 sing N N 218 LEU CG CD1 sing N N 219 LEU CG CD2 sing N N 220 LEU CG HG sing N N 221 LEU CD1 HD11 sing N N 222 LEU CD1 HD12 sing N N 223 LEU CD1 HD13 sing N N 224 LEU CD2 HD21 sing N N 225 LEU CD2 HD22 sing N N 226 LEU CD2 HD23 sing N N 227 LEU OXT HXT sing N N 228 LYS N CA sing N N 229 LYS N H sing N N 230 LYS N H2 sing N N 231 LYS CA C sing N N 232 LYS CA CB sing N N 233 LYS CA HA sing N N 234 LYS C O doub N N 235 LYS C OXT sing N N 236 LYS CB CG sing N N 237 LYS CB HB2 sing N N 238 LYS CB HB3 sing N N 239 LYS CG CD sing N N 240 LYS CG HG2 sing N N 241 LYS CG HG3 sing N N 242 LYS CD CE sing N N 243 LYS CD HD2 sing N N 244 LYS CD HD3 sing N N 245 LYS CE NZ sing N N 246 LYS CE HE2 sing N N 247 LYS CE HE3 sing N N 248 LYS NZ HZ1 sing N N 249 LYS NZ HZ2 sing N N 250 LYS NZ HZ3 sing N N 251 LYS OXT HXT sing N N 252 MET N CA sing N N 253 MET N H sing N N 254 MET N H2 sing N N 255 MET CA C sing N N 256 MET CA CB sing N N 257 MET CA HA sing N N 258 MET C O doub N N 259 MET C OXT sing N N 260 MET CB CG sing N N 261 MET CB HB2 sing N N 262 MET CB HB3 sing N N 263 MET CG SD sing N N 264 MET CG HG2 sing N N 265 MET CG HG3 sing N N 266 MET SD CE sing N N 267 MET CE HE1 sing N N 268 MET CE HE2 sing N N 269 MET CE HE3 sing N N 270 MET OXT HXT sing N N 271 PHE N CA sing N N 272 PHE N H sing N N 273 PHE N H2 sing N N 274 PHE CA C sing N N 275 PHE CA CB sing N N 276 PHE CA HA sing N N 277 PHE C O doub N N 278 PHE C OXT sing N N 279 PHE CB CG sing N N 280 PHE CB HB2 sing N N 281 PHE CB HB3 sing N N 282 PHE CG CD1 doub Y N 283 PHE CG CD2 sing Y N 284 PHE CD1 CE1 sing Y N 285 PHE CD1 HD1 sing N N 286 PHE CD2 CE2 doub Y N 287 PHE CD2 HD2 sing N N 288 PHE CE1 CZ doub Y N 289 PHE CE1 HE1 sing N N 290 PHE CE2 CZ sing Y N 291 PHE CE2 HE2 sing N N 292 PHE CZ HZ sing N N 293 PHE OXT HXT sing N N 294 PRO N CA sing N N 295 PRO N CD sing N N 296 PRO N H sing N N 297 PRO CA C sing N N 298 PRO CA CB sing N N 299 PRO CA HA sing N N 300 PRO C O doub N N 301 PRO C OXT sing N N 302 PRO CB CG sing N N 303 PRO CB HB2 sing N N 304 PRO CB HB3 sing N N 305 PRO CG CD sing N N 306 PRO CG HG2 sing N N 307 PRO CG HG3 sing N N 308 PRO CD HD2 sing N N 309 PRO CD HD3 sing N N 310 PRO OXT HXT sing N N 311 SER N CA sing N N 312 SER N H sing N N 313 SER N H2 sing N N 314 SER CA C sing N N 315 SER CA CB sing N N 316 SER CA HA sing N N 317 SER C O doub N N 318 SER C OXT sing N N 319 SER CB OG sing N N 320 SER CB HB2 sing N N 321 SER CB HB3 sing N N 322 SER OG HG sing N N 323 SER OXT HXT sing N N 324 THG N3 C2 sing Y N 325 THG N3 C4 sing Y N 326 THG N3 HN3 sing N N 327 THG C2 N1 doub Y N 328 THG C2 N2 sing N N 329 THG N1 C8A sing Y N 330 THG C8A C4A doub Y N 331 THG C8A N8 sing N N 332 THG C4A C4 sing Y N 333 THG C4A N5 sing N N 334 THG C4 O4 doub N N 335 THG N8 C7 sing N N 336 THG N8 HN8 sing N N 337 THG C7 C6 sing N N 338 THG C7 HC71 sing N N 339 THG C7 HC72 sing N N 340 THG C6 N5 sing N N 341 THG C6 C9 sing N N 342 THG C6 HC6 sing N N 343 THG N5 HN5 sing N N 344 THG C9 N10 sing N N 345 THG C9 HC91 sing N N 346 THG C9 HC92 sing N N 347 THG N10 "C4'" sing N N 348 THG N10 H10 sing N N 349 THG "C4'" "C3'" doub Y N 350 THG "C4'" "C5'" sing Y N 351 THG "C3'" "C2'" sing Y N 352 THG "C3'" HC3 sing N N 353 THG "C2'" "C1'" doub Y N 354 THG "C2'" HC2 sing N N 355 THG "C1'" "C6'" sing Y N 356 THG "C1'" C11 sing N N 357 THG "C6'" "C5'" doub Y N 358 THG "C6'" HC61 sing N N 359 THG "C5'" HC5 sing N N 360 THG C11 N sing N N 361 THG C11 O11 doub N N 362 THG N CA sing N N 363 THG N HN sing N N 364 THG CA C sing N N 365 THG CA CB sing N N 366 THG CA HCA sing N N 367 THG C OX2 sing N N 368 THG C OX1 doub N N 369 THG OX2 HX2 sing N N 370 THG CB CG sing N N 371 THG CB HCB1 sing N N 372 THG CB HCB2 sing N N 373 THG CG CD sing N N 374 THG CG HCG1 sing N N 375 THG CG HCG2 sing N N 376 THG CD OE1 doub N N 377 THG CD OE2 sing N N 378 THG OE2 HE2 sing N N 379 THG N2 HN21 sing N N 380 THG N2 HN22 sing N N 381 THR N CA sing N N 382 THR N H sing N N 383 THR N H2 sing N N 384 THR CA C sing N N 385 THR CA CB sing N N 386 THR CA HA sing N N 387 THR C O doub N N 388 THR C OXT sing N N 389 THR CB OG1 sing N N 390 THR CB CG2 sing N N 391 THR CB HB sing N N 392 THR OG1 HG1 sing N N 393 THR CG2 HG21 sing N N 394 THR CG2 HG22 sing N N 395 THR CG2 HG23 sing N N 396 THR OXT HXT sing N N 397 TRP N CA sing N N 398 TRP N H sing N N 399 TRP N H2 sing N N 400 TRP CA C sing N N 401 TRP CA CB sing N N 402 TRP CA HA sing N N 403 TRP C O doub N N 404 TRP C OXT sing N N 405 TRP CB CG sing N N 406 TRP CB HB2 sing N N 407 TRP CB HB3 sing N N 408 TRP CG CD1 doub Y N 409 TRP CG CD2 sing Y N 410 TRP CD1 NE1 sing Y N 411 TRP CD1 HD1 sing N N 412 TRP CD2 CE2 doub Y N 413 TRP CD2 CE3 sing Y N 414 TRP NE1 CE2 sing Y N 415 TRP NE1 HE1 sing N N 416 TRP CE2 CZ2 sing Y N 417 TRP CE3 CZ3 doub Y N 418 TRP CE3 HE3 sing N N 419 TRP CZ2 CH2 doub Y N 420 TRP CZ2 HZ2 sing N N 421 TRP CZ3 CH2 sing Y N 422 TRP CZ3 HZ3 sing N N 423 TRP CH2 HH2 sing N N 424 TRP OXT HXT sing N N 425 TYR N CA sing N N 426 TYR N H sing N N 427 TYR N H2 sing N N 428 TYR CA C sing N N 429 TYR CA CB sing N N 430 TYR CA HA sing N N 431 TYR C O doub N N 432 TYR C OXT sing N N 433 TYR CB CG sing N N 434 TYR CB HB2 sing N N 435 TYR CB HB3 sing N N 436 TYR CG CD1 doub Y N 437 TYR CG CD2 sing Y N 438 TYR CD1 CE1 sing Y N 439 TYR CD1 HD1 sing N N 440 TYR CD2 CE2 doub Y N 441 TYR CD2 HD2 sing N N 442 TYR CE1 CZ doub Y N 443 TYR CE1 HE1 sing N N 444 TYR CE2 CZ sing Y N 445 TYR CE2 HE2 sing N N 446 TYR CZ OH sing N N 447 TYR OH HH sing N N 448 TYR OXT HXT sing N N 449 VAL N CA sing N N 450 VAL N H sing N N 451 VAL N H2 sing N N 452 VAL CA C sing N N 453 VAL CA CB sing N N 454 VAL CA HA sing N N 455 VAL C O doub N N 456 VAL C OXT sing N N 457 VAL CB CG1 sing N N 458 VAL CB CG2 sing N N 459 VAL CB HB sing N N 460 VAL CG1 HG11 sing N N 461 VAL CG1 HG12 sing N N 462 VAL CG1 HG13 sing N N 463 VAL CG2 HG21 sing N N 464 VAL CG2 HG22 sing N N 465 VAL CG2 HG23 sing N N 466 VAL OXT HXT sing N N 467 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'IODIDE ION' IOD 3 "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" DCM 4 '(6S)-5,6,7,8-TETRAHYDROFOLATE' THG 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1B5D _pdbx_initial_refinement_model.details ? # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'light scattering' _pdbx_struct_assembly_auth_evidence.details 'The homodimer in MALS' #