HEADER FLUORESCENT PROTEIN 17-JUL-18 6AA7 TITLE FLUORESCENT PROTEIN FROM ACROPORA DIGITIFERA COMPND MOL_ID: 1; COMPND 2 MOLECULE: FLUORESCENT PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACROPORA DIGITIFERA; SOURCE 3 ORGANISM_COMMON: STAGHORN CORAL; SOURCE 4 ORGANISM_TAXID: 70779; SOURCE 5 GENE: M, LWE; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS FLUORESCENT PROTEIN, RED FLUORESCENT PROTEIN, ACROPORA DIGITIFERA, KEYWDS 2 CHROMOPHORE EXPDTA X-RAY DIFFRACTION AUTHOR S.E.KIM,K.Y.HWANG,K.H.NAM REVDAT 5 09-OCT-24 6AA7 1 REMARK REVDAT 4 22-NOV-23 6AA7 1 REMARK REVDAT 3 15-NOV-23 6AA7 1 LINK ATOM REVDAT 2 06-MAR-19 6AA7 1 JRNL REVDAT 1 22-AUG-18 6AA7 0 JRNL AUTH S.E.KIM,K.Y.HWANG,K.H.NAM JRNL TITL SPECTRAL AND STRUCTURAL ANALYSIS OF A RED FLUORESCENT JRNL TITL 2 PROTEIN FROM ACROPORA DIGITIFERA. JRNL REF PROTEIN SCI. V. 28 375 2019 JRNL REFN ESSN 1469-896X JRNL PMID 30368951 JRNL DOI 10.1002/PRO.3540 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0218 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.17 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 46584 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.178 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2388 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3334 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.29 REMARK 3 BIN R VALUE (WORKING SET) : 0.2520 REMARK 3 BIN FREE R VALUE SET COUNT : 184 REMARK 3 BIN FREE R VALUE : 0.2550 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3604 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 358 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.59 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.116 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.111 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.084 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.790 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.962 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3700 ; 0.018 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3343 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4981 ; 2.023 ; 1.951 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7785 ; 0.896 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 446 ; 7.320 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 168 ;35.063 ;24.048 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 635 ;16.238 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;21.026 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 515 ; 0.138 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4088 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 778 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1802 ; 2.931 ; 3.093 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1801 ; 2.929 ; 3.091 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2238 ; 3.819 ; 4.634 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2239 ; 3.820 ; 4.636 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1898 ; 3.847 ; 3.477 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1898 ; 3.846 ; 3.477 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2743 ; 5.748 ; 5.038 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4121 ; 7.388 ;36.941 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4020 ; 7.264 ;36.231 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6AA7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1300008403. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAR-18 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 11C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9794 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : K-B MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49007 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.010 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 8.100 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 33.0500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 6.40 REMARK 200 R MERGE FOR SHELL (I) : 0.37500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.880 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 5Y8Q REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: HEPES, LITHIUM SULFATE, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 295.5K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 39.30900 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.27650 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.30900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 45.27650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7610 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35670 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 181.10600 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 HIS B -1 REMARK 465 MET B 0 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 LEU B 3 REMARK 465 SER B 4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU B 117 O HOH B 301 1.76 REMARK 500 O HOH A 453 O HOH A 494 1.98 REMARK 500 O HOH A 306 O HOH A 453 2.02 REMARK 500 O HOH A 303 O HOH A 420 2.02 REMARK 500 O HOH A 302 O HOH A 461 2.04 REMARK 500 OD2 ASP A 173 O HOH A 301 2.06 REMARK 500 O HOH A 460 O HOH A 523 2.08 REMARK 500 O HOH A 354 O HOH A 490 2.11 REMARK 500 O HOH A 441 O HOH B 425 2.11 REMARK 500 O HOH A 435 O HOH A 501 2.13 REMARK 500 O HOH A 471 O HOH A 497 2.15 REMARK 500 NH2 ARG A 227 O HOH A 302 2.19 REMARK 500 OD1 ASP B 134 O HOH B 302 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 176 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG A 176 NE - CZ - NH2 ANGL. DEV. = -5.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 23 47.14 39.51 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 525 DISTANCE = 6.52 ANGSTROMS REMARK 999 REMARK 999 SEQUENCE REMARK 999 RESIDUE ASP 66, TYR 67 AND GLY 68 ARE MODIFIED TO MAKE CHROMOPHORE REMARK 999 (XYG 66). DBREF1 6AA7 A 1 231 UNP A0A1S7IWI8_ACRDI DBREF2 6AA7 A A0A1S7IWI8 1 231 DBREF1 6AA7 B 1 231 UNP A0A1S7IWI8_ACRDI DBREF2 6AA7 B A0A1S7IWI8 1 231 SEQADV 6AA7 GLY A -3 UNP A0A1S7IWI EXPRESSION TAG SEQADV 6AA7 SER A -2 UNP A0A1S7IWI EXPRESSION TAG SEQADV 6AA7 HIS A -1 UNP A0A1S7IWI EXPRESSION TAG SEQADV 6AA7 MET A 0 UNP A0A1S7IWI EXPRESSION TAG SEQADV 6AA7 XYG A 66 UNP A0A1S7IWI ASP 66 CHROMOPHORE SEQADV 6AA7 XYG A 66 UNP A0A1S7IWI TYR 67 CHROMOPHORE SEQADV 6AA7 XYG A 66 UNP A0A1S7IWI GLY 68 CHROMOPHORE SEQADV 6AA7 GLY B -3 UNP A0A1S7IWI EXPRESSION TAG SEQADV 6AA7 SER B -2 UNP A0A1S7IWI EXPRESSION TAG SEQADV 6AA7 HIS B -1 UNP A0A1S7IWI EXPRESSION TAG SEQADV 6AA7 MET B 0 UNP A0A1S7IWI EXPRESSION TAG SEQADV 6AA7 XYG B 66 UNP A0A1S7IWI ASP 66 CHROMOPHORE SEQADV 6AA7 XYG B 66 UNP A0A1S7IWI TYR 67 CHROMOPHORE SEQADV 6AA7 XYG B 66 UNP A0A1S7IWI GLY 68 CHROMOPHORE SEQRES 1 A 233 GLY SER HIS MET MET ALA LEU SER LYS HIS GLY LEU THR SEQRES 2 A 233 LYS ASP MET THR MET LYS TYR ARG MET GLU GLY CYS VAL SEQRES 3 A 233 ASP GLY HIS LYS PHE VAL ILE THR GLY HIS GLY ASN GLY SEQRES 4 A 233 SER PRO PHE GLU GLY LYS GLN THR ILE ASN LEU CYS VAL SEQRES 5 A 233 VAL GLU GLY GLY PRO LEU PRO PHE SER GLU ASP ILE LEU SEQRES 6 A 233 SER ALA VAL PHE XYG ASN ARG VAL PHE THR ASP TYR PRO SEQRES 7 A 233 GLN GLY MET VAL ASP PHE PHE LYS ASN SER CYS PRO ALA SEQRES 8 A 233 GLY TYR THR TRP GLN ARG SER LEU LEU PHE GLU ASP GLY SEQRES 9 A 233 ALA VAL CYS THR ALA SER ALA ASP ILE THR VAL SER VAL SEQRES 10 A 233 GLU GLU ASN CYS PHE TYR HIS GLU SER LYS PHE HIS GLY SEQRES 11 A 233 VAL ASN PHE PRO ALA ASP GLY PRO VAL MET LYS LYS MET SEQRES 12 A 233 THR ILE ASN TRP GLU PRO CYS CYS GLU LYS ILE ILE PRO SEQRES 13 A 233 VAL PRO ARG GLN GLY ILE LEU LYS GLY ASP VAL ALA MET SEQRES 14 A 233 TYR LEU LEU LEU LYS ASP GLY GLY ARG TYR ARG CYS GLN SEQRES 15 A 233 PHE ASP THR VAL TYR LYS ALA LYS THR ASP SER LYS LYS SEQRES 16 A 233 MET PRO GLU TRP HIS PHE ILE GLN HIS LYS LEU THR ARG SEQRES 17 A 233 GLU ASP ARG SER ASP ALA LYS ASN GLN LYS TRP GLN LEU SEQRES 18 A 233 ALA GLU HIS SER VAL ALA SER ARG SER ALA LEU ALA SEQRES 1 B 233 GLY SER HIS MET MET ALA LEU SER LYS HIS GLY LEU THR SEQRES 2 B 233 LYS ASP MET THR MET LYS TYR ARG MET GLU GLY CYS VAL SEQRES 3 B 233 ASP GLY HIS LYS PHE VAL ILE THR GLY HIS GLY ASN GLY SEQRES 4 B 233 SER PRO PHE GLU GLY LYS GLN THR ILE ASN LEU CYS VAL SEQRES 5 B 233 VAL GLU GLY GLY PRO LEU PRO PHE SER GLU ASP ILE LEU SEQRES 6 B 233 SER ALA VAL PHE XYG ASN ARG VAL PHE THR ASP TYR PRO SEQRES 7 B 233 GLN GLY MET VAL ASP PHE PHE LYS ASN SER CYS PRO ALA SEQRES 8 B 233 GLY TYR THR TRP GLN ARG SER LEU LEU PHE GLU ASP GLY SEQRES 9 B 233 ALA VAL CYS THR ALA SER ALA ASP ILE THR VAL SER VAL SEQRES 10 B 233 GLU GLU ASN CYS PHE TYR HIS GLU SER LYS PHE HIS GLY SEQRES 11 B 233 VAL ASN PHE PRO ALA ASP GLY PRO VAL MET LYS LYS MET SEQRES 12 B 233 THR ILE ASN TRP GLU PRO CYS CYS GLU LYS ILE ILE PRO SEQRES 13 B 233 VAL PRO ARG GLN GLY ILE LEU LYS GLY ASP VAL ALA MET SEQRES 14 B 233 TYR LEU LEU LEU LYS ASP GLY GLY ARG TYR ARG CYS GLN SEQRES 15 B 233 PHE ASP THR VAL TYR LYS ALA LYS THR ASP SER LYS LYS SEQRES 16 B 233 MET PRO GLU TRP HIS PHE ILE GLN HIS LYS LEU THR ARG SEQRES 17 B 233 GLU ASP ARG SER ASP ALA LYS ASN GLN LYS TRP GLN LEU SEQRES 18 B 233 ALA GLU HIS SER VAL ALA SER ARG SER ALA LEU ALA MODRES 6AA7 XYG A 66 ASP CHROMOPHORE MODRES 6AA7 XYG A 66 TYR CHROMOPHORE MODRES 6AA7 XYG A 66 GLY CHROMOPHORE MODRES 6AA7 XYG B 66 ASP CHROMOPHORE MODRES 6AA7 XYG B 66 TYR CHROMOPHORE MODRES 6AA7 XYG B 66 GLY CHROMOPHORE HET XYG A 66 20 HET XYG B 66 20 HETNAM XYG [(4Z)-2-[(1Z)-ETHANIMIDOYL]-4-(4-HYDROXYBENZYLIDENE)-5- HETNAM 2 XYG OXO-4,5-DIHYDRO-1H-IMIDAZOL-1-YL]ACETIC ACID HETSYN XYG CHROMOPHORE (DECARBOXYLATED ASP-TYR-GLY) FORMUL 1 XYG 2(C14 H13 N3 O4) FORMUL 3 HOH *358(H2 O) HELIX 1 AA1 LEU A 3 GLY A 7 5 5 HELIX 2 AA2 PRO A 37 GLU A 39 5 3 HELIX 3 AA3 SER A 57 PHE A 65 5 9 HELIX 4 AA4 ASP A 81 SER A 86 1 6 HELIX 5 AA5 PRO B 37 GLU B 39 5 3 HELIX 6 AA6 SER B 57 PHE B 65 5 9 HELIX 7 AA7 ASP B 81 CYS B 87 1 7 HELIX 8 AA8 PRO B 156 GLN B 158 5 3 SHEET 1 AA113 THR A 142 TRP A 145 0 SHEET 2 AA113 LEU A 161 LEU A 171 -1 O LEU A 170 N ASN A 144 SHEET 3 AA113 ARG A 176 ALA A 187 -1 O CYS A 179 N MET A 167 SHEET 4 AA113 TYR A 91 PHE A 99 -1 N THR A 92 O LYS A 186 SHEET 5 AA113 VAL A 104 SER A 114 -1 O ILE A 111 N TYR A 91 SHEET 6 AA113 CYS A 119 VAL A 129 -1 O CYS A 119 N SER A 114 SHEET 7 AA113 MET A 12 VAL A 22 1 N ARG A 17 O SER A 124 SHEET 8 AA113 HIS A 25 SER A 36 -1 O ILE A 29 N MET A 18 SHEET 9 AA113 LYS A 41 GLU A 50 -1 O ASN A 45 N HIS A 32 SHEET 10 AA113 LYS A 216 SER A 226 -1 O LEU A 219 N ILE A 44 SHEET 11 AA113 HIS A 198 ASP A 208 -1 N GLN A 201 O VAL A 224 SHEET 12 AA113 CYS A 148 PRO A 154 -1 N GLU A 150 O ILE A 200 SHEET 13 AA113 LEU A 161 LEU A 171 -1 O LYS A 162 N ILE A 153 SHEET 1 AA213 THR B 142 TRP B 145 0 SHEET 2 AA213 ILE B 160 LEU B 171 -1 O LEU B 170 N ASN B 144 SHEET 3 AA213 ARG B 176 ALA B 187 -1 O CYS B 179 N MET B 167 SHEET 4 AA213 TYR B 91 PHE B 99 -1 N THR B 92 O LYS B 186 SHEET 5 AA213 VAL B 104 SER B 114 -1 O ALA B 107 N ARG B 95 SHEET 6 AA213 CYS B 119 VAL B 129 -1 O CYS B 119 N SER B 114 SHEET 7 AA213 MET B 12 VAL B 22 1 N LYS B 15 O PHE B 120 SHEET 8 AA213 HIS B 25 SER B 36 -1 O GLY B 33 N MET B 14 SHEET 9 AA213 LYS B 41 GLU B 50 -1 O ASN B 45 N HIS B 32 SHEET 10 AA213 LYS B 216 SER B 226 -1 O LEU B 219 N ILE B 44 SHEET 11 AA213 HIS B 198 ASP B 208 -1 N GLU B 207 O GLN B 218 SHEET 12 AA213 CYS B 148 VAL B 155 -1 N ILE B 152 O HIS B 198 SHEET 13 AA213 ILE B 160 LEU B 171 -1 O LYS B 162 N ILE B 153 LINK C PHE A 65 N1 XYG A 66 1555 1555 1.28 LINK C3 XYG A 66 N ASN A 69 1555 1555 1.27 LINK C PHE B 65 N1 XYG B 66 1555 1555 1.31 LINK C3 XYG B 66 N ASN B 69 1555 1555 1.31 CISPEP 1 GLY A 52 PRO A 53 0 -2.76 CISPEP 2 CYS A 87 PRO A 88 0 5.49 CISPEP 3 GLY B 52 PRO B 53 0 -8.57 CISPEP 4 CYS B 87 PRO B 88 0 13.14 CRYST1 78.618 90.553 73.429 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012720 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011043 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013619 0.00000