HEADER MEMBRANE PROTEIN 18-JUL-18 6AAG TITLE CRYSTAL STRUCTURE OF BUDDING YEAST ATG8 COMPLEXED WITH THE HELICAL AIM TITLE 2 OF HFL1. COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSMEMBRANE PROTEIN 184 HOMOLOG YKR051W,AUTOPHAGY-RELATED COMPND 3 PROTEIN 8; COMPND 4 CHAIN: A, B, C, D, E, F, G; COMPND 5 SYNONYM: AUTOPHAGY-RELATED UBIQUITIN-LIKE MODIFIER ATG8,CYTOPLASM TO COMPND 6 VACUOLE TARGETING PROTEIN 5; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN ATCC 204508 / SOURCE 3 S288C), SACCHAROMYCES CEREVISIAE (STRAIN YJM789); SOURCE 4 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 5 ORGANISM_TAXID: 559292, 307796; SOURCE 6 STRAIN: ATCC 204508 / S288C, YJM789; SOURCE 7 GENE: YKR051W, ATG8, APG8, AUT7, CVT5, SCY_0144; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 10 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) KEYWDS VACUOLE AUTOPHAGY, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.YAMASAKI,N.N.NODA REVDAT 2 22-NOV-23 6AAG 1 REMARK REVDAT 1 12-DEC-18 6AAG 0 JRNL AUTH X.M.LIU,A.YAMASAKI,X.M.DU,V.C.COFFMAN,Y.OHSUMI,H.NAKATOGAWA, JRNL AUTH 2 J.Q.WU,N.N.NODA,L.L.DU JRNL TITL LIPIDATION-INDEPENDENT VACUOLAR FUNCTIONS OF ATG8 RELY ON JRNL TITL 2 ITS NONCANONICAL INTERACTION WITH A VACUOLE MEMBRANE PROTEIN JRNL REF ELIFE V. 7 2018 JRNL REFN ESSN 2050-084X JRNL PMID 30451685 JRNL DOI 10.7554/ELIFE.41237 REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.12_2829: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.73 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 40501 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.195 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 2010 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.7397 - 5.8882 0.98 2840 150 0.1575 0.2011 REMARK 3 2 5.8882 - 4.6751 0.99 2795 149 0.1516 0.1889 REMARK 3 3 4.6751 - 4.0846 1.00 2791 137 0.1417 0.2085 REMARK 3 4 4.0846 - 3.7113 1.00 2811 140 0.1706 0.2006 REMARK 3 5 3.7113 - 3.4454 1.00 2718 172 0.1883 0.2522 REMARK 3 6 3.4454 - 3.2423 1.00 2725 159 0.2146 0.2650 REMARK 3 7 3.2423 - 3.0800 1.00 2790 135 0.2337 0.2846 REMARK 3 8 3.0800 - 2.9459 1.00 2751 139 0.2502 0.2838 REMARK 3 9 2.9459 - 2.8326 1.00 2773 146 0.2616 0.3416 REMARK 3 10 2.8326 - 2.7348 1.00 2719 150 0.2518 0.3241 REMARK 3 11 2.7348 - 2.6493 0.99 2779 132 0.2698 0.3319 REMARK 3 12 2.6493 - 2.5736 0.99 2721 131 0.2779 0.3356 REMARK 3 13 2.5736 - 2.5058 0.99 2749 142 0.2863 0.3607 REMARK 3 14 2.5058 - 2.4447 0.92 2529 128 0.2732 0.3036 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.370 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.110 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 7872 REMARK 3 ANGLE : 0.790 10712 REMARK 3 CHIRALITY : 0.054 1156 REMARK 3 PLANARITY : 0.007 1413 REMARK 3 DIHEDRAL : 14.285 4815 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 30 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -22 THROUGH -3 ) REMARK 3 ORIGIN FOR THE GROUP (A): 192.0597 18.0440 26.3255 REMARK 3 T TENSOR REMARK 3 T11: 0.3789 T22: 0.3668 REMARK 3 T33: 0.3833 T12: -0.0614 REMARK 3 T13: -0.0774 T23: -0.0353 REMARK 3 L TENSOR REMARK 3 L11: 4.3241 L22: 5.2119 REMARK 3 L33: 4.4268 L12: -1.4490 REMARK 3 L13: -1.2459 L23: 1.5766 REMARK 3 S TENSOR REMARK 3 S11: -0.2073 S12: 0.1074 S13: -0.6307 REMARK 3 S21: 0.7004 S22: -0.0035 S23: 0.1800 REMARK 3 S31: 0.3018 S32: -0.0754 S33: 0.2711 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -2 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): 219.0555 27.0521 19.6918 REMARK 3 T TENSOR REMARK 3 T11: 0.4273 T22: 0.8865 REMARK 3 T33: 0.5167 T12: 0.0783 REMARK 3 T13: 0.0163 T23: 0.0095 REMARK 3 L TENSOR REMARK 3 L11: 5.6789 L22: 0.0015 REMARK 3 L33: 0.3890 L12: 0.1687 REMARK 3 L13: 1.5533 L23: 0.0107 REMARK 3 S TENSOR REMARK 3 S11: 0.2151 S12: 2.7837 S13: -0.5302 REMARK 3 S21: 0.0587 S22: 0.4318 S23: 0.0500 REMARK 3 S31: -0.4025 S32: 0.1510 S33: -0.6247 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 11 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): 226.1356 37.0601 30.9913 REMARK 3 T TENSOR REMARK 3 T11: 0.2846 T22: 0.4421 REMARK 3 T33: 0.5634 T12: 0.0420 REMARK 3 T13: 0.0179 T23: 0.0604 REMARK 3 L TENSOR REMARK 3 L11: 3.6818 L22: 5.3039 REMARK 3 L33: 2.9024 L12: 2.2524 REMARK 3 L13: 0.6631 L23: -1.0603 REMARK 3 S TENSOR REMARK 3 S11: 0.0145 S12: 0.5142 S13: 0.5768 REMARK 3 S21: 0.1808 S22: 0.0588 S23: 0.0041 REMARK 3 S31: -0.2452 S32: 0.3603 S33: -0.0871 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 36 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 222.7087 23.5914 37.2151 REMARK 3 T TENSOR REMARK 3 T11: 0.3288 T22: 0.3777 REMARK 3 T33: 0.4063 T12: 0.0294 REMARK 3 T13: -0.0102 T23: -0.0402 REMARK 3 L TENSOR REMARK 3 L11: 4.6957 L22: 2.7770 REMARK 3 L33: 2.3322 L12: 0.4037 REMARK 3 L13: 1.9841 L23: -0.4899 REMARK 3 S TENSOR REMARK 3 S11: 0.1425 S12: 0.2695 S13: -0.4613 REMARK 3 S21: 0.0188 S22: -0.0183 S23: -0.2293 REMARK 3 S31: 0.3091 S32: 0.2482 S33: -0.1243 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID -22 THROUGH -3 ) REMARK 3 ORIGIN FOR THE GROUP (A): 175.7694 21.3107 -0.7269 REMARK 3 T TENSOR REMARK 3 T11: 0.3802 T22: 0.4720 REMARK 3 T33: 0.2466 T12: -0.0205 REMARK 3 T13: -0.0244 T23: -0.0353 REMARK 3 L TENSOR REMARK 3 L11: 5.7640 L22: 6.4270 REMARK 3 L33: 5.9828 L12: -0.5713 REMARK 3 L13: -0.1352 L23: -0.1472 REMARK 3 S TENSOR REMARK 3 S11: -0.3034 S12: 0.8327 S13: -0.4218 REMARK 3 S21: -1.1410 S22: 0.2227 S23: -0.1326 REMARK 3 S31: 0.1729 S32: -0.0095 S33: 0.0768 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID -2 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): 184.2349 36.9870 22.4511 REMARK 3 T TENSOR REMARK 3 T11: 0.6642 T22: 0.4105 REMARK 3 T33: 0.6700 T12: 0.0590 REMARK 3 T13: -0.0898 T23: -0.1618 REMARK 3 L TENSOR REMARK 3 L11: 0.1803 L22: 0.2942 REMARK 3 L33: 4.5703 L12: 0.2159 REMARK 3 L13: 0.7836 L23: -0.0298 REMARK 3 S TENSOR REMARK 3 S11: -0.7335 S12: -0.3172 S13: 0.2499 REMARK 3 S21: -0.4047 S22: -0.2677 S23: 0.8417 REMARK 3 S31: -0.4550 S32: -0.9106 S33: 1.1141 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 11 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 188.4999 32.8585 38.7525 REMARK 3 T TENSOR REMARK 3 T11: 0.5650 T22: 0.6088 REMARK 3 T33: 0.4940 T12: 0.0403 REMARK 3 T13: 0.1110 T23: -0.1066 REMARK 3 L TENSOR REMARK 3 L11: 5.2704 L22: 2.0496 REMARK 3 L33: 3.6442 L12: -1.6674 REMARK 3 L13: 0.6990 L23: -2.7291 REMARK 3 S TENSOR REMARK 3 S11: -0.4278 S12: -0.8358 S13: 0.5004 REMARK 3 S21: 0.8476 S22: 0.3222 S23: 0.4305 REMARK 3 S31: 0.5899 S32: -0.3308 S33: 0.3110 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 25 THROUGH 98 ) REMARK 3 ORIGIN FOR THE GROUP (A): 197.8830 24.3199 23.6780 REMARK 3 T TENSOR REMARK 3 T11: 0.3778 T22: 0.2192 REMARK 3 T33: 0.3407 T12: -0.0049 REMARK 3 T13: -0.0152 T23: -0.0255 REMARK 3 L TENSOR REMARK 3 L11: 4.0959 L22: 1.7381 REMARK 3 L33: 5.0039 L12: -0.4486 REMARK 3 L13: 1.1529 L23: 0.9273 REMARK 3 S TENSOR REMARK 3 S11: -0.0130 S12: 0.1255 S13: -0.1274 REMARK 3 S21: 0.0336 S22: 0.0544 S23: -0.0727 REMARK 3 S31: -0.0236 S32: 0.0751 S33: -0.0801 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 99 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): 198.8702 32.6679 24.7846 REMARK 3 T TENSOR REMARK 3 T11: 0.4423 T22: 0.4639 REMARK 3 T33: 0.4935 T12: -0.0327 REMARK 3 T13: -0.0883 T23: 0.1026 REMARK 3 L TENSOR REMARK 3 L11: 3.0454 L22: 6.0218 REMARK 3 L33: 2.0915 L12: -0.5089 REMARK 3 L13: 1.7928 L23: 5.0102 REMARK 3 S TENSOR REMARK 3 S11: -0.1561 S12: 0.3945 S13: 0.7883 REMARK 3 S21: -0.2208 S22: 0.0821 S23: 0.0597 REMARK 3 S31: -1.0236 S32: 0.8224 S33: 0.2149 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'C' AND (RESID -22 THROUGH -3 ) REMARK 3 ORIGIN FOR THE GROUP (A): 148.8224 34.8589 -9.6005 REMARK 3 T TENSOR REMARK 3 T11: 0.4622 T22: 0.5862 REMARK 3 T33: 0.5551 T12: 0.1141 REMARK 3 T13: -0.1311 T23: -0.1336 REMARK 3 L TENSOR REMARK 3 L11: 2.1368 L22: 2.1542 REMARK 3 L33: 5.7046 L12: -0.2222 REMARK 3 L13: -1.0119 L23: 1.3613 REMARK 3 S TENSOR REMARK 3 S11: -0.0610 S12: -0.0207 S13: 0.3852 REMARK 3 S21: -0.1795 S22: -0.0625 S23: 0.2559 REMARK 3 S31: -0.8033 S32: -1.0258 S33: 0.2105 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'C' AND (RESID -2 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): 158.6372 15.4302 10.8026 REMARK 3 T TENSOR REMARK 3 T11: 0.5156 T22: 0.6823 REMARK 3 T33: 0.6070 T12: -0.1346 REMARK 3 T13: 0.0711 T23: 0.1785 REMARK 3 L TENSOR REMARK 3 L11: 0.0114 L22: -0.0315 REMARK 3 L33: 1.7535 L12: -0.0857 REMARK 3 L13: 0.1302 L23: 0.2170 REMARK 3 S TENSOR REMARK 3 S11: -0.2102 S12: -0.6182 S13: -0.9726 REMARK 3 S21: -0.1571 S22: 0.4467 S23: 0.4024 REMARK 3 S31: 0.3359 S32: -0.9829 S33: -0.0653 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 11 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): 174.3385 9.7249 8.3974 REMARK 3 T TENSOR REMARK 3 T11: 0.4524 T22: 0.3036 REMARK 3 T33: 0.4594 T12: -0.0361 REMARK 3 T13: -0.0288 T23: 0.0097 REMARK 3 L TENSOR REMARK 3 L11: 2.3387 L22: 3.0047 REMARK 3 L33: 2.6729 L12: -0.6582 REMARK 3 L13: 0.1773 L23: 0.1959 REMARK 3 S TENSOR REMARK 3 S11: 0.0586 S12: -0.1180 S13: -0.5011 REMARK 3 S21: -0.1371 S22: -0.1745 S23: 0.0619 REMARK 3 S31: 0.5031 S32: 0.1058 S33: 0.1135 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 36 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): 173.9140 25.0574 9.8526 REMARK 3 T TENSOR REMARK 3 T11: 0.3198 T22: 0.3229 REMARK 3 T33: 0.2976 T12: -0.0416 REMARK 3 T13: 0.0053 T23: -0.0102 REMARK 3 L TENSOR REMARK 3 L11: 3.8412 L22: 3.5796 REMARK 3 L33: 2.5616 L12: -0.6793 REMARK 3 L13: 0.9206 L23: -0.5518 REMARK 3 S TENSOR REMARK 3 S11: -0.1118 S12: -0.0888 S13: 0.1805 REMARK 3 S21: 0.0163 S22: -0.0413 S23: 0.1080 REMARK 3 S31: -0.0275 S32: -0.1473 S33: 0.1205 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'D' AND (RESID -22 THROUGH -3 ) REMARK 3 ORIGIN FOR THE GROUP (A): 194.0305 -3.0411 55.3921 REMARK 3 T TENSOR REMARK 3 T11: 0.4943 T22: 0.5650 REMARK 3 T33: 0.4041 T12: -0.1423 REMARK 3 T13: -0.0545 T23: -0.0822 REMARK 3 L TENSOR REMARK 3 L11: 1.2233 L22: 7.8577 REMARK 3 L33: 4.8030 L12: 1.6733 REMARK 3 L13: -0.8378 L23: -2.1690 REMARK 3 S TENSOR REMARK 3 S11: 0.2124 S12: -0.5987 S13: 0.0979 REMARK 3 S21: 0.8645 S22: -0.4590 S23: 0.0796 REMARK 3 S31: -0.5032 S32: -0.1838 S33: 0.2739 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'D' AND (RESID -2 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): 188.3245 -3.0050 26.5835 REMARK 3 T TENSOR REMARK 3 T11: 0.4086 T22: 0.8180 REMARK 3 T33: 0.4897 T12: 0.0101 REMARK 3 T13: 0.0765 T23: 0.0218 REMARK 3 L TENSOR REMARK 3 L11: 0.1268 L22: 0.2371 REMARK 3 L33: 0.4706 L12: 0.2305 REMARK 3 L13: 0.3172 L23: 0.3583 REMARK 3 S TENSOR REMARK 3 S11: -0.3929 S12: 0.7366 S13: -0.4056 REMARK 3 S21: -0.0956 S22: 0.2925 S23: -0.4484 REMARK 3 S31: -0.0138 S32: 1.2529 S33: -0.1160 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 11 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): 176.6679 -14.0533 21.6445 REMARK 3 T TENSOR REMARK 3 T11: 0.3920 T22: 0.5734 REMARK 3 T33: 0.4877 T12: 0.0418 REMARK 3 T13: -0.1071 T23: -0.1109 REMARK 3 L TENSOR REMARK 3 L11: 4.8735 L22: 3.4390 REMARK 3 L33: 4.6332 L12: 1.8254 REMARK 3 L13: 0.9199 L23: 1.5329 REMARK 3 S TENSOR REMARK 3 S11: 0.1544 S12: 1.0696 S13: -0.6841 REMARK 3 S21: -0.2010 S22: 0.3505 S23: -0.3016 REMARK 3 S31: 0.5732 S32: 0.6947 S33: -0.2903 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 36 THROUGH 47 ) REMARK 3 ORIGIN FOR THE GROUP (A): 180.8487 -0.9131 35.6762 REMARK 3 T TENSOR REMARK 3 T11: 0.4381 T22: 0.4767 REMARK 3 T33: 0.3572 T12: -0.0298 REMARK 3 T13: -0.0362 T23: -0.0800 REMARK 3 L TENSOR REMARK 3 L11: 7.8108 L22: 2.0631 REMARK 3 L33: 2.0081 L12: -3.9328 REMARK 3 L13: -0.9396 L23: 0.9219 REMARK 3 S TENSOR REMARK 3 S11: -0.1237 S12: 0.4200 S13: 1.0629 REMARK 3 S21: -0.0521 S22: 0.3623 S23: -0.4273 REMARK 3 S31: -0.0159 S32: 1.1914 S33: -0.4034 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 48 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 169.3546 -5.2176 31.2780 REMARK 3 T TENSOR REMARK 3 T11: 0.2567 T22: 0.2734 REMARK 3 T33: 0.3593 T12: 0.0052 REMARK 3 T13: 0.0084 T23: -0.0151 REMARK 3 L TENSOR REMARK 3 L11: 7.2008 L22: 3.8999 REMARK 3 L33: 5.3950 L12: 1.1859 REMARK 3 L13: 1.9247 L23: 1.5327 REMARK 3 S TENSOR REMARK 3 S11: 0.0965 S12: 0.0656 S13: 0.7032 REMARK 3 S21: 0.1548 S22: -0.1720 S23: 0.3872 REMARK 3 S31: -0.1142 S32: -0.1243 S33: 0.0509 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'E' AND (RESID -22 THROUGH -13 ) REMARK 3 ORIGIN FOR THE GROUP (A): 179.8917 -16.7072 30.6069 REMARK 3 T TENSOR REMARK 3 T11: 0.5867 T22: 0.4799 REMARK 3 T33: 0.4170 T12: 0.1383 REMARK 3 T13: -0.1275 T23: -0.0095 REMARK 3 L TENSOR REMARK 3 L11: 8.9759 L22: 4.8625 REMARK 3 L33: 6.1743 L12: -2.4415 REMARK 3 L13: -1.5728 L23: 2.2831 REMARK 3 S TENSOR REMARK 3 S11: -0.2995 S12: -0.8994 S13: -0.7559 REMARK 3 S21: -0.1568 S22: 0.0636 S23: 0.1767 REMARK 3 S31: 0.3123 S32: 0.5173 S33: 0.0012 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'E' AND (RESID -12 THROUGH -2 ) REMARK 3 ORIGIN FOR THE GROUP (A): 164.2384 -9.3688 40.2044 REMARK 3 T TENSOR REMARK 3 T11: 0.3841 T22: 0.6678 REMARK 3 T33: 0.3382 T12: -0.0176 REMARK 3 T13: 0.0916 T23: -0.0390 REMARK 3 L TENSOR REMARK 3 L11: 9.0074 L22: 7.4304 REMARK 3 L33: 8.1223 L12: -0.2247 REMARK 3 L13: -2.3221 L23: 2.6021 REMARK 3 S TENSOR REMARK 3 S11: 0.0190 S12: -1.6377 S13: 0.4077 REMARK 3 S21: 0.5706 S22: -0.0145 S23: 0.6987 REMARK 3 S31: 0.7151 S32: 0.2974 S33: 0.0290 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'E' AND (RESID -1 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): 152.8322 8.4141 30.2460 REMARK 3 T TENSOR REMARK 3 T11: 0.6688 T22: 0.5524 REMARK 3 T33: 1.1022 T12: 0.2212 REMARK 3 T13: 0.0255 T23: -0.0896 REMARK 3 L TENSOR REMARK 3 L11: 4.1062 L22: 0.6791 REMARK 3 L33: 5.6381 L12: 0.6256 REMARK 3 L13: 1.4905 L23: 0.3606 REMARK 3 S TENSOR REMARK 3 S11: -0.5826 S12: -1.1762 S13: 1.0514 REMARK 3 S21: 0.7366 S22: -0.2733 S23: 1.0066 REMARK 3 S31: -0.3656 S32: 0.5060 S33: 0.3782 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 11 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 145.8555 -1.3074 19.7127 REMARK 3 T TENSOR REMARK 3 T11: 0.2633 T22: 0.3858 REMARK 3 T33: 0.5665 T12: -0.0344 REMARK 3 T13: -0.0050 T23: 0.0847 REMARK 3 L TENSOR REMARK 3 L11: 4.9011 L22: 2.8049 REMARK 3 L33: 3.3478 L12: -0.3479 REMARK 3 L13: 1.5071 L23: 0.1041 REMARK 3 S TENSOR REMARK 3 S11: -0.2524 S12: 0.3413 S13: 0.9499 REMARK 3 S21: -0.0844 S22: 0.2466 S23: 0.3252 REMARK 3 S31: -0.2957 S32: -0.1079 S33: 0.0264 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'F' AND (RESID -23 THROUGH -4 ) REMARK 3 ORIGIN FOR THE GROUP (A): 216.1470 32.7364 39.5663 REMARK 3 T TENSOR REMARK 3 T11: 0.2701 T22: 0.5217 REMARK 3 T33: 0.5060 T12: -0.0333 REMARK 3 T13: -0.1035 T23: 0.0172 REMARK 3 L TENSOR REMARK 3 L11: 2.5454 L22: 5.8563 REMARK 3 L33: 4.5070 L12: 1.2705 REMARK 3 L13: -3.0079 L23: -1.4598 REMARK 3 S TENSOR REMARK 3 S11: 0.0371 S12: 0.1493 S13: 0.0577 REMARK 3 S21: -0.0154 S22: 0.6267 S23: 0.3101 REMARK 3 S31: -0.1508 S32: -0.9842 S33: -0.6721 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'F' AND (RESID -3 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 242.5647 9.7921 44.5437 REMARK 3 T TENSOR REMARK 3 T11: 0.6771 T22: 0.4907 REMARK 3 T33: 0.7706 T12: 0.0349 REMARK 3 T13: 0.0375 T23: -0.1592 REMARK 3 L TENSOR REMARK 3 L11: 3.7171 L22: 1.0307 REMARK 3 L33: 0.7071 L12: -1.3407 REMARK 3 L13: 0.5596 L23: -0.3751 REMARK 3 S TENSOR REMARK 3 S11: -0.0656 S12: 0.7523 S13: -0.9010 REMARK 3 S21: -0.6976 S22: 0.1288 S23: 0.1760 REMARK 3 S31: 0.5900 S32: 0.0541 S33: -0.0292 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 25 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 246.0629 23.1631 52.6941 REMARK 3 T TENSOR REMARK 3 T11: 0.3325 T22: 0.2702 REMARK 3 T33: 0.2491 T12: 0.0131 REMARK 3 T13: -0.0118 T23: 0.0191 REMARK 3 L TENSOR REMARK 3 L11: 5.2703 L22: 3.7842 REMARK 3 L33: 3.1789 L12: -1.0916 REMARK 3 L13: 1.5824 L23: 0.4173 REMARK 3 S TENSOR REMARK 3 S11: 0.0013 S12: 0.2424 S13: -0.0043 REMARK 3 S21: -0.0679 S22: -0.1380 S23: 0.1138 REMARK 3 S31: 0.1140 S32: 0.0872 S33: 0.1452 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'G' AND (RESID -23 THROUGH -4 ) REMARK 3 ORIGIN FOR THE GROUP (A): 153.4623 -3.4999 13.3482 REMARK 3 T TENSOR REMARK 3 T11: 0.3272 T22: 0.5377 REMARK 3 T33: 0.6890 T12: 0.0093 REMARK 3 T13: 0.0029 T23: 0.1103 REMARK 3 L TENSOR REMARK 3 L11: 1.9831 L22: 6.4532 REMARK 3 L33: 3.7426 L12: 1.0954 REMARK 3 L13: -0.2768 L23: -0.4993 REMARK 3 S TENSOR REMARK 3 S11: -0.3367 S12: 0.4840 S13: 0.4401 REMARK 3 S21: -0.5141 S22: 0.0948 S23: -0.7505 REMARK 3 S31: -0.2330 S32: 0.4670 S33: 0.2199 REMARK 3 TLS GROUP : 27 REMARK 3 SELECTION: CHAIN 'G' AND (RESID -3 THROUGH 10 ) REMARK 3 ORIGIN FOR THE GROUP (A): 127.2628 -13.4665 22.3337 REMARK 3 T TENSOR REMARK 3 T11: 0.4196 T22: 0.6143 REMARK 3 T33: 0.5821 T12: -0.0722 REMARK 3 T13: 0.0254 T23: 0.1231 REMARK 3 L TENSOR REMARK 3 L11: 7.1056 L22: 0.0102 REMARK 3 L33: -0.0775 L12: 0.2662 REMARK 3 L13: 0.6447 L23: 0.0216 REMARK 3 S TENSOR REMARK 3 S11: 0.1685 S12: -0.7831 S13: -1.0846 REMARK 3 S21: 0.0166 S22: 0.1446 S23: 0.0264 REMARK 3 S31: -0.0324 S32: -0.2258 S33: -0.3889 REMARK 3 TLS GROUP : 28 REMARK 3 SELECTION: CHAIN 'G' AND (RESID 11 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 110.9733 -3.6924 23.6941 REMARK 3 T TENSOR REMARK 3 T11: 0.5610 T22: 0.6674 REMARK 3 T33: 0.4131 T12: -0.0432 REMARK 3 T13: -0.0452 T23: -0.0938 REMARK 3 L TENSOR REMARK 3 L11: 1.9663 L22: 2.0294 REMARK 3 L33: 3.2899 L12: -1.4079 REMARK 3 L13: 0.0268 L23: -1.7258 REMARK 3 S TENSOR REMARK 3 S11: 0.2665 S12: -0.6751 S13: 0.1920 REMARK 3 S21: 0.1880 S22: -0.5182 S23: 0.2548 REMARK 3 S31: -0.0869 S32: -0.4314 S33: 0.2840 REMARK 3 TLS GROUP : 29 REMARK 3 SELECTION: CHAIN 'G' AND (RESID 25 THROUGH 98 ) REMARK 3 ORIGIN FOR THE GROUP (A): 120.5411 -4.2921 6.7770 REMARK 3 T TENSOR REMARK 3 T11: 0.2997 T22: 0.4456 REMARK 3 T33: 0.4216 T12: -0.0029 REMARK 3 T13: -0.0286 T23: 0.0435 REMARK 3 L TENSOR REMARK 3 L11: 3.7016 L22: 2.2713 REMARK 3 L33: 3.4956 L12: -0.7291 REMARK 3 L13: 0.8490 L23: 0.0053 REMARK 3 S TENSOR REMARK 3 S11: 0.1976 S12: 0.1827 S13: -0.0218 REMARK 3 S21: -0.1432 S22: -0.3381 S23: -0.1307 REMARK 3 S31: -0.0007 S32: 0.3688 S33: 0.1172 REMARK 3 TLS GROUP : 30 REMARK 3 SELECTION: CHAIN 'G' AND (RESID 99 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 117.4538 -10.7729 10.3296 REMARK 3 T TENSOR REMARK 3 T11: 0.3603 T22: 0.4834 REMARK 3 T33: 0.3845 T12: 0.0200 REMARK 3 T13: -0.0666 T23: 0.0849 REMARK 3 L TENSOR REMARK 3 L11: 7.8554 L22: 4.0113 REMARK 3 L33: 7.4193 L12: 0.0246 REMARK 3 L13: -4.4647 L23: 0.6095 REMARK 3 S TENSOR REMARK 3 S11: 0.1823 S12: 0.3504 S13: 0.5011 REMARK 3 S21: -0.0299 S22: 0.0952 S23: -0.4269 REMARK 3 S31: 0.5315 S32: -0.2846 S33: -0.3083 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6AAG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1300008412. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-FEB-17 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 5.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40557 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.445 REMARK 200 RESOLUTION RANGE LOW (A) : 45.730 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.11200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.64700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 2ZPN REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 6% PEG6000, 0.1 M SODIUM CITRATE PH REMARK 280 5.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 30.82500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEPTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEPTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 19940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 49000 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -102.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, G REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 271.40400 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 30.82500 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -23 REMARK 465 PHE A 115 REMARK 465 GLY A 116 REMARK 465 GLY B -23 REMARK 465 GLY B 116 REMARK 465 GLY C -23 REMARK 465 GLY D -23 REMARK 465 PHE D 115 REMARK 465 GLY D 116 REMARK 465 GLY E -23 REMARK 465 GLN E -11 REMARK 465 PHE E 115 REMARK 465 GLY E 116 REMARK 465 PHE F 115 REMARK 465 GLY F 116 REMARK 465 PHE G 115 REMARK 465 GLY G 116 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PRO A -22 CG CD REMARK 470 ARG A -10 CG CD NE CZ NH1 NH2 REMARK 470 MET A 1 CG SD CE REMARK 470 LYS A 2 CG CD CE NZ REMARK 470 GLU A 12 CG CD OE1 OE2 REMARK 470 LYS A 13 CG CD CE NZ REMARK 470 LYS A 38 CG CD CE NZ REMARK 470 LYS A 66 CG CD CE NZ REMARK 470 LYS A 101 CG CD CE NZ REMARK 470 LYS B 13 CG CD CE NZ REMARK 470 ARG B 24 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 38 CG CD CE NZ REMARK 470 PRO C -22 CG CD REMARK 470 GLU C -21 CG CD OE1 OE2 REMARK 470 ARG C -10 CG CD NE CZ NH1 NH2 REMARK 470 MET C 1 CG SD CE REMARK 470 LYS C 2 CG CD CE NZ REMARK 470 LYS C 13 CG CD CE NZ REMARK 470 GLU C 37 CG CD OE1 OE2 REMARK 470 LYS C 38 CG CD CE NZ REMARK 470 LYS C 101 CG CD CE NZ REMARK 470 PRO D -22 CG CD REMARK 470 ARG D -10 CG CD NE CZ NH1 NH2 REMARK 470 MET D 1 CG SD CE REMARK 470 LYS D 2 CG CD CE NZ REMARK 470 LYS D 13 CG CD CE NZ REMARK 470 GLU D 19 CG CD OE1 OE2 REMARK 470 LYS D 38 CG CD CE NZ REMARK 470 ASP D 82 CG OD1 OD2 REMARK 470 ARG E -10 CG CD NE CZ NH1 NH2 REMARK 470 MET E 1 CG SD CE REMARK 470 LYS E 13 CG CD CE NZ REMARK 470 LYS E 15 CG CD CE NZ REMARK 470 GLU E 19 CG CD OE1 OE2 REMARK 470 ASP E 23 CG OD1 OD2 REMARK 470 ASN E 27 CG OD1 ND2 REMARK 470 GLU E 37 CG CD OE1 OE2 REMARK 470 LYS E 38 CG CD CE NZ REMARK 470 LYS E 101 CG CD CE NZ REMARK 470 GLU F -21 CG CD OE1 OE2 REMARK 470 ARG F -10 CG CD NE CZ NH1 NH2 REMARK 470 SER F 3 OG REMARK 470 GLU F 12 CG CD OE1 OE2 REMARK 470 LYS F 38 CG CD CE NZ REMARK 470 ASP F 82 CG OD1 OD2 REMARK 470 GLU G -21 CG CD OE1 OE2 REMARK 470 ARG G -10 CG CD NE CZ NH1 NH2 REMARK 470 MET G 1 CG SD CE REMARK 470 LYS G 2 CG CD CE NZ REMARK 470 GLU G 37 CG CD OE1 OE2 REMARK 470 LYS G 38 CG CD CE NZ REMARK 470 LYS G 66 CG CD CE NZ REMARK 470 LYS G 74 CG CD CE NZ REMARK 470 LYS G 101 CG CD CE NZ REMARK 470 GLU G 112 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLU C -17 O HOH C 201 2.10 REMARK 500 OE1 GLU A -6 O HOH A 201 2.11 REMARK 500 O GLN A -11 O HOH A 202 2.11 REMARK 500 O PRO E -7 O HOH E 201 2.12 REMARK 500 OD2 ASP B 82 O HOH B 201 2.18 REMARK 500 OG1 THR A 114 O HOH A 203 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A -3 66.05 -153.68 REMARK 500 THR A 87 -8.19 -59.34 REMARK 500 ASN B -3 65.23 -153.24 REMARK 500 SER B 3 -165.61 -101.48 REMARK 500 ASN C -3 63.62 -153.45 REMARK 500 ASN C 27 34.49 -89.13 REMARK 500 PHE C 115 29.54 -141.00 REMARK 500 ILE D -14 56.55 -93.28 REMARK 500 ARG D -10 5.39 54.49 REMARK 500 ASN D -3 64.15 -152.74 REMARK 500 ASN E -3 66.12 -154.19 REMARK 500 LYS E 2 70.06 44.00 REMARK 500 ASN F -3 64.99 -153.08 REMARK 500 ASN G -3 65.71 -153.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ARG D -10 THR D -9 147.86 REMARK 500 REMARK 500 REMARK: NULL DBREF 6AAG A -21 0 UNP P36142 TM184_YEAST 368 389 DBREF 6AAG A 1 116 UNP A6ZKM4 ATG8_YEAS7 1 116 DBREF 6AAG B -21 0 UNP P36142 TM184_YEAST 368 389 DBREF 6AAG B 1 116 UNP A6ZKM4 ATG8_YEAS7 1 116 DBREF 6AAG C -21 0 UNP P36142 TM184_YEAST 368 389 DBREF 6AAG C 1 116 UNP A6ZKM4 ATG8_YEAS7 1 116 DBREF 6AAG D -21 0 UNP P36142 TM184_YEAST 368 389 DBREF 6AAG D 1 116 UNP A6ZKM4 ATG8_YEAS7 1 116 DBREF 6AAG E -21 0 UNP P36142 TM184_YEAST 368 389 DBREF 6AAG E 1 116 UNP A6ZKM4 ATG8_YEAS7 1 116 DBREF 6AAG F -21 0 UNP P36142 TM184_YEAST 368 389 DBREF 6AAG F 1 116 UNP A6ZKM4 ATG8_YEAS7 1 116 DBREF 6AAG G -21 0 UNP P36142 TM184_YEAST 368 389 DBREF 6AAG G 1 116 UNP A6ZKM4 ATG8_YEAS7 1 116 SEQADV 6AAG GLY A -23 UNP P36142 EXPRESSION TAG SEQADV 6AAG PRO A -22 UNP P36142 EXPRESSION TAG SEQADV 6AAG PRO A 26 UNP A6ZKM4 LYS 26 ENGINEERED MUTATION SEQADV 6AAG GLY B -23 UNP P36142 EXPRESSION TAG SEQADV 6AAG PRO B -22 UNP P36142 EXPRESSION TAG SEQADV 6AAG PRO B 26 UNP A6ZKM4 LYS 26 ENGINEERED MUTATION SEQADV 6AAG GLY C -23 UNP P36142 EXPRESSION TAG SEQADV 6AAG PRO C -22 UNP P36142 EXPRESSION TAG SEQADV 6AAG PRO C 26 UNP A6ZKM4 LYS 26 ENGINEERED MUTATION SEQADV 6AAG GLY D -23 UNP P36142 EXPRESSION TAG SEQADV 6AAG PRO D -22 UNP P36142 EXPRESSION TAG SEQADV 6AAG PRO D 26 UNP A6ZKM4 LYS 26 ENGINEERED MUTATION SEQADV 6AAG GLY E -23 UNP P36142 EXPRESSION TAG SEQADV 6AAG PRO E -22 UNP P36142 EXPRESSION TAG SEQADV 6AAG PRO E 26 UNP A6ZKM4 LYS 26 ENGINEERED MUTATION SEQADV 6AAG GLY F -23 UNP P36142 EXPRESSION TAG SEQADV 6AAG PRO F -22 UNP P36142 EXPRESSION TAG SEQADV 6AAG PRO F 26 UNP A6ZKM4 LYS 26 ENGINEERED MUTATION SEQADV 6AAG GLY G -23 UNP P36142 EXPRESSION TAG SEQADV 6AAG PRO G -22 UNP P36142 EXPRESSION TAG SEQADV 6AAG PRO G 26 UNP A6ZKM4 LYS 26 ENGINEERED MUTATION SEQRES 1 A 140 GLY PRO GLU GLU SER TRP GLU ASP ASP ILE ALA GLY GLN SEQRES 2 A 140 ARG THR PHE PRO GLU ASP PRO ASN TYR PRO VAL MET LYS SEQRES 3 A 140 SER THR PHE LYS SER GLU TYR PRO PHE GLU LYS ARG LYS SEQRES 4 A 140 ALA GLU SER GLU ARG ILE ALA ASP ARG PHE PRO ASN ARG SEQRES 5 A 140 ILE PRO VAL ILE CYS GLU LYS ALA GLU LYS SER ASP ILE SEQRES 6 A 140 PRO GLU ILE ASP LYS ARG LYS TYR LEU VAL PRO ALA ASP SEQRES 7 A 140 LEU THR VAL GLY GLN PHE VAL TYR VAL ILE ARG LYS ARG SEQRES 8 A 140 ILE MET LEU PRO PRO GLU LYS ALA ILE PHE ILE PHE VAL SEQRES 9 A 140 ASN ASP THR LEU PRO PRO THR ALA ALA LEU MET SER ALA SEQRES 10 A 140 ILE TYR GLN GLU HIS LYS ASP LYS ASP GLY PHE LEU TYR SEQRES 11 A 140 VAL THR TYR SER GLY GLU ASN THR PHE GLY SEQRES 1 B 140 GLY PRO GLU GLU SER TRP GLU ASP ASP ILE ALA GLY GLN SEQRES 2 B 140 ARG THR PHE PRO GLU ASP PRO ASN TYR PRO VAL MET LYS SEQRES 3 B 140 SER THR PHE LYS SER GLU TYR PRO PHE GLU LYS ARG LYS SEQRES 4 B 140 ALA GLU SER GLU ARG ILE ALA ASP ARG PHE PRO ASN ARG SEQRES 5 B 140 ILE PRO VAL ILE CYS GLU LYS ALA GLU LYS SER ASP ILE SEQRES 6 B 140 PRO GLU ILE ASP LYS ARG LYS TYR LEU VAL PRO ALA ASP SEQRES 7 B 140 LEU THR VAL GLY GLN PHE VAL TYR VAL ILE ARG LYS ARG SEQRES 8 B 140 ILE MET LEU PRO PRO GLU LYS ALA ILE PHE ILE PHE VAL SEQRES 9 B 140 ASN ASP THR LEU PRO PRO THR ALA ALA LEU MET SER ALA SEQRES 10 B 140 ILE TYR GLN GLU HIS LYS ASP LYS ASP GLY PHE LEU TYR SEQRES 11 B 140 VAL THR TYR SER GLY GLU ASN THR PHE GLY SEQRES 1 C 140 GLY PRO GLU GLU SER TRP GLU ASP ASP ILE ALA GLY GLN SEQRES 2 C 140 ARG THR PHE PRO GLU ASP PRO ASN TYR PRO VAL MET LYS SEQRES 3 C 140 SER THR PHE LYS SER GLU TYR PRO PHE GLU LYS ARG LYS SEQRES 4 C 140 ALA GLU SER GLU ARG ILE ALA ASP ARG PHE PRO ASN ARG SEQRES 5 C 140 ILE PRO VAL ILE CYS GLU LYS ALA GLU LYS SER ASP ILE SEQRES 6 C 140 PRO GLU ILE ASP LYS ARG LYS TYR LEU VAL PRO ALA ASP SEQRES 7 C 140 LEU THR VAL GLY GLN PHE VAL TYR VAL ILE ARG LYS ARG SEQRES 8 C 140 ILE MET LEU PRO PRO GLU LYS ALA ILE PHE ILE PHE VAL SEQRES 9 C 140 ASN ASP THR LEU PRO PRO THR ALA ALA LEU MET SER ALA SEQRES 10 C 140 ILE TYR GLN GLU HIS LYS ASP LYS ASP GLY PHE LEU TYR SEQRES 11 C 140 VAL THR TYR SER GLY GLU ASN THR PHE GLY SEQRES 1 D 140 GLY PRO GLU GLU SER TRP GLU ASP ASP ILE ALA GLY GLN SEQRES 2 D 140 ARG THR PHE PRO GLU ASP PRO ASN TYR PRO VAL MET LYS SEQRES 3 D 140 SER THR PHE LYS SER GLU TYR PRO PHE GLU LYS ARG LYS SEQRES 4 D 140 ALA GLU SER GLU ARG ILE ALA ASP ARG PHE PRO ASN ARG SEQRES 5 D 140 ILE PRO VAL ILE CYS GLU LYS ALA GLU LYS SER ASP ILE SEQRES 6 D 140 PRO GLU ILE ASP LYS ARG LYS TYR LEU VAL PRO ALA ASP SEQRES 7 D 140 LEU THR VAL GLY GLN PHE VAL TYR VAL ILE ARG LYS ARG SEQRES 8 D 140 ILE MET LEU PRO PRO GLU LYS ALA ILE PHE ILE PHE VAL SEQRES 9 D 140 ASN ASP THR LEU PRO PRO THR ALA ALA LEU MET SER ALA SEQRES 10 D 140 ILE TYR GLN GLU HIS LYS ASP LYS ASP GLY PHE LEU TYR SEQRES 11 D 140 VAL THR TYR SER GLY GLU ASN THR PHE GLY SEQRES 1 E 140 GLY PRO GLU GLU SER TRP GLU ASP ASP ILE ALA GLY GLN SEQRES 2 E 140 ARG THR PHE PRO GLU ASP PRO ASN TYR PRO VAL MET LYS SEQRES 3 E 140 SER THR PHE LYS SER GLU TYR PRO PHE GLU LYS ARG LYS SEQRES 4 E 140 ALA GLU SER GLU ARG ILE ALA ASP ARG PHE PRO ASN ARG SEQRES 5 E 140 ILE PRO VAL ILE CYS GLU LYS ALA GLU LYS SER ASP ILE SEQRES 6 E 140 PRO GLU ILE ASP LYS ARG LYS TYR LEU VAL PRO ALA ASP SEQRES 7 E 140 LEU THR VAL GLY GLN PHE VAL TYR VAL ILE ARG LYS ARG SEQRES 8 E 140 ILE MET LEU PRO PRO GLU LYS ALA ILE PHE ILE PHE VAL SEQRES 9 E 140 ASN ASP THR LEU PRO PRO THR ALA ALA LEU MET SER ALA SEQRES 10 E 140 ILE TYR GLN GLU HIS LYS ASP LYS ASP GLY PHE LEU TYR SEQRES 11 E 140 VAL THR TYR SER GLY GLU ASN THR PHE GLY SEQRES 1 F 140 GLY PRO GLU GLU SER TRP GLU ASP ASP ILE ALA GLY GLN SEQRES 2 F 140 ARG THR PHE PRO GLU ASP PRO ASN TYR PRO VAL MET LYS SEQRES 3 F 140 SER THR PHE LYS SER GLU TYR PRO PHE GLU LYS ARG LYS SEQRES 4 F 140 ALA GLU SER GLU ARG ILE ALA ASP ARG PHE PRO ASN ARG SEQRES 5 F 140 ILE PRO VAL ILE CYS GLU LYS ALA GLU LYS SER ASP ILE SEQRES 6 F 140 PRO GLU ILE ASP LYS ARG LYS TYR LEU VAL PRO ALA ASP SEQRES 7 F 140 LEU THR VAL GLY GLN PHE VAL TYR VAL ILE ARG LYS ARG SEQRES 8 F 140 ILE MET LEU PRO PRO GLU LYS ALA ILE PHE ILE PHE VAL SEQRES 9 F 140 ASN ASP THR LEU PRO PRO THR ALA ALA LEU MET SER ALA SEQRES 10 F 140 ILE TYR GLN GLU HIS LYS ASP LYS ASP GLY PHE LEU TYR SEQRES 11 F 140 VAL THR TYR SER GLY GLU ASN THR PHE GLY SEQRES 1 G 140 GLY PRO GLU GLU SER TRP GLU ASP ASP ILE ALA GLY GLN SEQRES 2 G 140 ARG THR PHE PRO GLU ASP PRO ASN TYR PRO VAL MET LYS SEQRES 3 G 140 SER THR PHE LYS SER GLU TYR PRO PHE GLU LYS ARG LYS SEQRES 4 G 140 ALA GLU SER GLU ARG ILE ALA ASP ARG PHE PRO ASN ARG SEQRES 5 G 140 ILE PRO VAL ILE CYS GLU LYS ALA GLU LYS SER ASP ILE SEQRES 6 G 140 PRO GLU ILE ASP LYS ARG LYS TYR LEU VAL PRO ALA ASP SEQRES 7 G 140 LEU THR VAL GLY GLN PHE VAL TYR VAL ILE ARG LYS ARG SEQRES 8 G 140 ILE MET LEU PRO PRO GLU LYS ALA ILE PHE ILE PHE VAL SEQRES 9 G 140 ASN ASP THR LEU PRO PRO THR ALA ALA LEU MET SER ALA SEQRES 10 G 140 ILE TYR GLN GLU HIS LYS ASP LYS ASP GLY PHE LEU TYR SEQRES 11 G 140 VAL THR TYR SER GLY GLU ASN THR PHE GLY FORMUL 8 HOH *195(H2 O) HELIX 1 AA1 THR A 4 TYR A 9 1 6 HELIX 2 AA2 PRO A 10 PHE A 25 1 16 HELIX 3 AA3 THR A 56 MET A 69 1 14 HELIX 4 AA4 LEU A 90 LYS A 99 1 10 HELIX 5 AA5 THR B 4 TYR B 9 1 6 HELIX 6 AA6 PRO B 10 PHE B 25 1 16 HELIX 7 AA7 THR B 56 MET B 69 1 14 HELIX 8 AA8 LEU B 90 LYS B 99 1 10 HELIX 9 AA9 THR C 4 TYR C 9 1 6 HELIX 10 AB1 PRO C 10 PHE C 25 1 16 HELIX 11 AB2 THR C 56 MET C 69 1 14 HELIX 12 AB3 LEU C 90 LYS C 99 1 10 HELIX 13 AB4 THR D 4 TYR D 9 1 6 HELIX 14 AB5 PRO D 10 PHE D 25 1 16 HELIX 15 AB6 THR D 56 MET D 69 1 14 HELIX 16 AB7 LEU D 90 LYS D 99 1 10 HELIX 17 AB8 THR E 4 TYR E 9 1 6 HELIX 18 AB9 PRO E 10 PHE E 25 1 16 HELIX 19 AC1 THR E 56 MET E 69 1 14 HELIX 20 AC2 LEU E 90 LYS E 99 1 10 HELIX 21 AC3 THR F 4 TYR F 9 1 6 HELIX 22 AC4 PRO F 10 PHE F 25 1 16 HELIX 23 AC5 THR F 56 MET F 69 1 14 HELIX 24 AC6 LEU F 90 LYS F 99 1 10 HELIX 25 AC7 THR G 4 TYR G 9 1 6 HELIX 26 AC8 PRO G 10 PHE G 25 1 16 HELIX 27 AC9 THR G 56 MET G 69 1 14 HELIX 28 AD1 LEU G 90 LYS G 99 1 10 SHEET 1 AA1 4 LYS A 48 PRO A 52 0 SHEET 2 AA1 4 ARG A 28 LYS A 35 -1 N VAL A 31 O TYR A 49 SHEET 3 AA1 4 LEU A 105 SER A 110 1 O VAL A 107 N ILE A 32 SHEET 4 AA1 4 PHE A 77 PHE A 79 -1 N PHE A 77 O SER A 110 SHEET 1 AA2 4 LYS B 48 PRO B 52 0 SHEET 2 AA2 4 ARG B 28 LYS B 35 -1 N ILE B 29 O VAL B 51 SHEET 3 AA2 4 LEU B 105 SER B 110 1 O VAL B 107 N ILE B 32 SHEET 4 AA2 4 PHE B 77 PHE B 79 -1 N PHE B 77 O SER B 110 SHEET 1 AA3 4 LYS C 48 PRO C 52 0 SHEET 2 AA3 4 ARG C 28 LYS C 35 -1 N ILE C 29 O VAL C 51 SHEET 3 AA3 4 LEU C 105 SER C 110 1 O LEU C 105 N ILE C 32 SHEET 4 AA3 4 PHE C 77 PHE C 79 -1 N PHE C 77 O SER C 110 SHEET 1 AA4 4 LYS D 48 PRO D 52 0 SHEET 2 AA4 4 ARG D 28 LYS D 35 -1 N VAL D 31 O TYR D 49 SHEET 3 AA4 4 LEU D 105 SER D 110 1 O VAL D 107 N ILE D 32 SHEET 4 AA4 4 PHE D 77 PHE D 79 -1 N PHE D 77 O SER D 110 SHEET 1 AA5 4 LYS E 48 PRO E 52 0 SHEET 2 AA5 4 ARG E 28 LYS E 35 -1 N VAL E 31 O TYR E 49 SHEET 3 AA5 4 LEU E 105 SER E 110 1 O VAL E 107 N ILE E 32 SHEET 4 AA5 4 PHE E 77 PHE E 79 -1 N PHE E 77 O SER E 110 SHEET 1 AA6 4 LYS F 48 PRO F 52 0 SHEET 2 AA6 4 ARG F 28 LYS F 35 -1 N ILE F 29 O VAL F 51 SHEET 3 AA6 4 LEU F 105 SER F 110 1 O VAL F 107 N ILE F 32 SHEET 4 AA6 4 PHE F 77 PHE F 79 -1 N PHE F 77 O SER F 110 SHEET 1 AA7 4 LYS G 48 PRO G 52 0 SHEET 2 AA7 4 ARG G 28 LYS G 35 -1 N VAL G 31 O TYR G 49 SHEET 3 AA7 4 LEU G 105 SER G 110 1 O VAL G 107 N ILE G 32 SHEET 4 AA7 4 PHE G 77 PHE G 79 -1 N PHE G 77 O SER G 110 CRYST1 90.468 61.650 100.112 90.00 96.37 90.00 P 1 21 1 14 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011054 0.000000 0.001235 0.00000 SCALE2 0.000000 0.016221 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010051 0.00000