HEADER TRANSPORT PROTEIN 18-JUL-18 6AAL TITLE CRYSTAL STRUCTURE OF PUTATIVE AMINO ACID BINDING PERIPLASMIC ABC TITLE 2 TRANSPORTER PROTEIN FROM CANDIDATUS LIBERIBACTER ASIATICUS IN COMPLEX TITLE 3 WITH ARGININE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE AMINO ACID-BINDING PERIPLASMIC ABC TRANSPORTER COMPND 3 PROTEIN; COMPND 4 CHAIN: A, B; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LIBERIBACTER ASIATICUS (STRAIN PSY62); SOURCE 3 ORGANISM_TAXID: 537021; SOURCE 4 STRAIN: PSY62; SOURCE 5 GENE: CLIBASIA_05070; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28C KEYWDS PERIPLASMIC, SOLUTE BINDING, CANDIDATUS LIBERIBACTER ASIATICUS, ABC KEYWDS 2 TRANSPORTER, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.KUMAR,P.KESARI,D.K.GHOSH,P.KUMAR,A.K.SHARMA REVDAT 3 22-NOV-23 6AAL 1 REMARK REVDAT 2 18-SEP-19 6AAL 1 JRNL REVDAT 1 12-JUN-19 6AAL 0 JRNL AUTH P.KUMAR,P.KESARI,S.KOKANE,D.K.GHOSH,P.KUMAR,A.K.SHARMA JRNL TITL CRYSTAL STRUCTURES OF A PUTATIVE PERIPLASMIC CYSTINE-BINDING JRNL TITL 2 PROTEIN FROM CANDIDATUS LIBERIBACTER ASIATICUS: INSIGHTS JRNL TITL 3 INTO AN ADAPTED MECHANISM OF LIGAND BINDING. JRNL REF FEBS J. V. 286 3450 2019 JRNL REFN ISSN 1742-464X JRNL PMID 31063259 JRNL DOI 10.1111/FEBS.14921 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0218 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 70.64 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 3 NUMBER OF REFLECTIONS : 14811 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.290 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.300 REMARK 3 FREE R VALUE TEST SET COUNT : 826 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1038 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.35 REMARK 3 BIN R VALUE (WORKING SET) : 0.2960 REMARK 3 BIN FREE R VALUE SET COUNT : 65 REMARK 3 BIN FREE R VALUE : 0.3160 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3760 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 96 REMARK 3 SOLVENT ATOMS : 80 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.79 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.31000 REMARK 3 B22 (A**2) : 0.13000 REMARK 3 B33 (A**2) : -0.44000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.398 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.360 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 17.454 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.869 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3920 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3722 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5260 ; 1.618 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8599 ; 0.843 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 468 ; 7.467 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 187 ;34.662 ;23.262 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 699 ;18.075 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 33 ;18.314 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 589 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4265 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 824 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1883 ; 2.696 ; 3.953 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1878 ; 2.695 ; 3.951 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2344 ; 4.179 ; 5.921 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2345 ; 4.178 ; 5.921 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2037 ; 2.896 ; 4.315 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2038 ; 2.896 ; 4.315 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2917 ; 4.480 ; 6.324 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4275 ; 6.566 ;46.303 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4275 ; 6.567 ;46.304 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6AAL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 25-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1300008407. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-MAR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 V703G REMARK 200 DATA SCALING SOFTWARE : HKL-2000 V703G REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15666 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 70.640 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.15000 REMARK 200 FOR THE DATA SET : 9.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.80000 REMARK 200 FOR SHELL : 1.230 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MORDA 22(2018-05-05) REMARK 200 STARTING MODEL: 2YLN REMARK 200 REMARK 200 REMARK: CUBIC REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2M AMMONIUM SULPHATE, 0.1M SODIUM REMARK 280 ACETATE TRIHYDRATE PH 5.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.17100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 61.91600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 61.91600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.17100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 PHE A 2 REMARK 465 ARG A 3 REMARK 465 THR A 4 REMARK 465 GLU A 5 REMARK 465 ASP A 6 REMARK 465 GLN A 7 REMARK 465 MET B 1 REMARK 465 PHE B 2 REMARK 465 ARG B 3 REMARK 465 THR B 4 REMARK 465 GLU B 5 REMARK 465 ASP B 6 REMARK 465 GLN B 7 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 9 120.99 90.97 REMARK 500 SER A 22 108.16 -163.81 REMARK 500 ASN A 48 66.24 35.89 REMARK 500 ILE B 17 46.26 -141.43 REMARK 500 SER B 22 98.49 -165.61 REMARK 500 GLN B 26 139.96 176.08 REMARK 500 LYS B 154 12.72 89.16 REMARK 500 ASP B 176 61.32 -108.63 REMARK 500 ASN B 200 83.48 -62.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU B 133 LEU B 134 -147.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 441 DISTANCE = 6.05 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ARG A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 311 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 312 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 313 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 314 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 307 DBREF 6AAL A 2 241 UNP C6XGT2 C6XGT2_LIBAP 35 274 DBREF 6AAL B 2 241 UNP C6XGT2 C6XGT2_LIBAP 35 274 SEQADV 6AAL MET A 1 UNP C6XGT2 INITIATING METHIONINE SEQADV 6AAL MET B 1 UNP C6XGT2 INITIATING METHIONINE SEQRES 1 A 241 MET PHE ARG THR GLU ASP GLN SER ALA LEU ARG VAL GLY SEQRES 2 A 241 THR ASP GLY ILE TYR PRO PRO HIS SER PHE HIS ALA GLN SEQRES 3 A 241 ASP GLY ARG GLY GLU LEU THR GLY PHE ASP ILE ASP LEU SEQRES 4 A 241 ILE LYS GLU VAL ALA HIS ARG LEU ASN LEU LYS VAL GLU SEQRES 5 A 241 PHE PHE GLU THR ALA VAL SER GLY LEU ILE THR GLY LEU SEQRES 6 A 241 ASP THR ASN ARG TYR ASP VAL LEU VAL ASN VAL ALA ILE SEQRES 7 A 241 THR PRO GLU ARG GLN LYS LYS TYR ASP PHE SER ILE PRO SEQRES 8 A 241 TYR ILE ALA HIS ARG VAL LEU LEU VAL VAL ARG SER ASP SEQRES 9 A 241 GLN GLN ASP ILE ARG SER PHE LYS ASP LEU THR ASP LYS SEQRES 10 A 241 THR VAL ALA GLN ILE LEU GLY THR ASP LEU SER ARG PHE SEQRES 11 A 241 ALA LYS GLU LEU LYS SER HIS LEU VAL PHE SER HIS ASN SEQRES 12 A 241 PHE GLU GLN SER LEU GLN LEU LEU LEU SER LYS ARG THR SEQRES 13 A 241 ASP ALA THR MET ILE PRO ASP ILE PRO PHE PHE ASN PHE SEQRES 14 A 241 LEU GLU ARG ARG PRO HIS ASP GLY ASN LEU PHE LYS ILE SEQRES 15 A 241 ALA ASP ARG MET LYS ASP ASN SER ALA VAL ALA PHE MET SEQRES 16 A 241 MET ARG LYS GLY ASN ASN LYS LEU THR ARG SER ILE ASN SEQRES 17 A 241 GLU ILE LEU CYS ALA ILE HIS LEU ASP GLY THR TYR LYS SEQRES 18 A 241 LYS ILE PHE ASP ARG TYR PHE ASP LYS ASN ILE ILE SER SEQRES 19 A 241 SER VAL PRO GLY CYS SER SER SEQRES 1 B 241 MET PHE ARG THR GLU ASP GLN SER ALA LEU ARG VAL GLY SEQRES 2 B 241 THR ASP GLY ILE TYR PRO PRO HIS SER PHE HIS ALA GLN SEQRES 3 B 241 ASP GLY ARG GLY GLU LEU THR GLY PHE ASP ILE ASP LEU SEQRES 4 B 241 ILE LYS GLU VAL ALA HIS ARG LEU ASN LEU LYS VAL GLU SEQRES 5 B 241 PHE PHE GLU THR ALA VAL SER GLY LEU ILE THR GLY LEU SEQRES 6 B 241 ASP THR ASN ARG TYR ASP VAL LEU VAL ASN VAL ALA ILE SEQRES 7 B 241 THR PRO GLU ARG GLN LYS LYS TYR ASP PHE SER ILE PRO SEQRES 8 B 241 TYR ILE ALA HIS ARG VAL LEU LEU VAL VAL ARG SER ASP SEQRES 9 B 241 GLN GLN ASP ILE ARG SER PHE LYS ASP LEU THR ASP LYS SEQRES 10 B 241 THR VAL ALA GLN ILE LEU GLY THR ASP LEU SER ARG PHE SEQRES 11 B 241 ALA LYS GLU LEU LYS SER HIS LEU VAL PHE SER HIS ASN SEQRES 12 B 241 PHE GLU GLN SER LEU GLN LEU LEU LEU SER LYS ARG THR SEQRES 13 B 241 ASP ALA THR MET ILE PRO ASP ILE PRO PHE PHE ASN PHE SEQRES 14 B 241 LEU GLU ARG ARG PRO HIS ASP GLY ASN LEU PHE LYS ILE SEQRES 15 B 241 ALA ASP ARG MET LYS ASP ASN SER ALA VAL ALA PHE MET SEQRES 16 B 241 MET ARG LYS GLY ASN ASN LYS LEU THR ARG SER ILE ASN SEQRES 17 B 241 GLU ILE LEU CYS ALA ILE HIS LEU ASP GLY THR TYR LYS SEQRES 18 B 241 LYS ILE PHE ASP ARG TYR PHE ASP LYS ASN ILE ILE SER SEQRES 19 B 241 SER VAL PRO GLY CYS SER SER HET EDO A 301 4 HET SO4 A 302 5 HET SO4 A 303 5 HET ARG A 304 12 HET EDO A 305 4 HET EDO A 306 4 HET EDO A 307 4 HET EDO A 308 4 HET EDO A 309 4 HET EDO A 310 4 HET EDO A 311 4 HET EDO A 312 4 HET EDO A 313 4 HET ACT A 314 4 HET SO4 B 301 5 HET SO4 B 302 5 HET EDO B 303 4 HET ACT B 304 4 HET ACT B 305 4 HET ACT B 306 4 HET ACT B 307 4 HETNAM EDO 1,2-ETHANEDIOL HETNAM SO4 SULFATE ION HETNAM ARG ARGININE HETNAM ACT ACETATE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO 11(C2 H6 O2) FORMUL 4 SO4 4(O4 S 2-) FORMUL 6 ARG C6 H15 N4 O2 1+ FORMUL 16 ACT 5(C2 H3 O2 1-) FORMUL 24 HOH *80(H2 O) HELIX 1 AA1 ALA A 25 ARG A 29 1 5 HELIX 2 AA2 GLY A 34 LEU A 47 1 14 HELIX 3 AA3 ALA A 57 SER A 59 5 3 HELIX 4 AA4 GLY A 60 THR A 67 1 8 HELIX 5 AA5 THR A 79 LYS A 85 1 7 HELIX 6 AA6 SER A 110 THR A 115 5 6 HELIX 7 AA7 THR A 125 LEU A 134 1 10 HELIX 8 AA8 ASN A 143 SER A 153 1 11 HELIX 9 AA9 ASP A 163 ARG A 173 1 11 HELIX 10 AB1 PRO A 174 ASN A 178 5 5 HELIX 11 AB2 ASN A 200 ASP A 217 1 18 HELIX 12 AB3 GLY A 218 PHE A 228 1 11 HELIX 13 AB4 GLY B 34 LEU B 47 1 14 HELIX 14 AB5 ALA B 57 SER B 59 5 3 HELIX 15 AB6 GLY B 60 THR B 67 1 8 HELIX 16 AB7 THR B 79 LYS B 85 1 7 HELIX 17 AB8 SER B 110 LEU B 114 5 5 HELIX 18 AB9 LEU B 127 GLU B 133 1 7 HELIX 19 AC1 ASN B 143 SER B 153 1 11 HELIX 20 AC2 ASP B 163 ARG B 173 1 11 HELIX 21 AC3 ASN B 200 ASP B 217 1 18 HELIX 22 AC4 GLY B 218 PHE B 228 1 11 SHEET 1 AA1 5 VAL A 51 GLU A 55 0 SHEET 2 AA1 5 LEU A 10 THR A 14 1 N VAL A 12 O PHE A 54 SHEET 3 AA1 5 VAL A 72 ALA A 77 1 O VAL A 72 N GLY A 13 SHEET 4 AA1 5 SER A 190 ARG A 197 -1 O MET A 195 N LEU A 73 SHEET 5 AA1 5 TYR A 86 PHE A 88 -1 N ASP A 87 O MET A 196 SHEET 1 AA2 5 VAL A 51 GLU A 55 0 SHEET 2 AA2 5 LEU A 10 THR A 14 1 N VAL A 12 O PHE A 54 SHEET 3 AA2 5 VAL A 72 ALA A 77 1 O VAL A 72 N GLY A 13 SHEET 4 AA2 5 SER A 190 ARG A 197 -1 O MET A 195 N LEU A 73 SHEET 5 AA2 5 ILE A 93 HIS A 95 -1 N HIS A 95 O SER A 190 SHEET 1 AA3 2 PHE A 23 HIS A 24 0 SHEET 2 AA3 2 LEU A 32 THR A 33 -1 O THR A 33 N PHE A 23 SHEET 1 AA4 3 THR A 159 PRO A 162 0 SHEET 2 AA4 3 VAL A 97 ARG A 102 -1 N VAL A 100 O THR A 159 SHEET 3 AA4 3 PHE A 180 ARG A 185 -1 O ALA A 183 N LEU A 99 SHEET 1 AA5 2 THR A 118 ILE A 122 0 SHEET 2 AA5 2 HIS A 137 SER A 141 1 O HIS A 137 N VAL A 119 SHEET 1 AA6 5 LYS B 50 GLU B 55 0 SHEET 2 AA6 5 ALA B 9 THR B 14 1 N VAL B 12 O GLU B 52 SHEET 3 AA6 5 VAL B 72 ALA B 77 1 O VAL B 72 N GLY B 13 SHEET 4 AA6 5 SER B 190 ARG B 197 -1 O ALA B 193 N VAL B 76 SHEET 5 AA6 5 TYR B 86 PHE B 88 -1 N ASP B 87 O MET B 196 SHEET 1 AA7 5 LYS B 50 GLU B 55 0 SHEET 2 AA7 5 ALA B 9 THR B 14 1 N VAL B 12 O GLU B 52 SHEET 3 AA7 5 VAL B 72 ALA B 77 1 O VAL B 72 N GLY B 13 SHEET 4 AA7 5 SER B 190 ARG B 197 -1 O ALA B 193 N VAL B 76 SHEET 5 AA7 5 ILE B 93 HIS B 95 -1 N HIS B 95 O SER B 190 SHEET 1 AA8 2 PHE B 23 HIS B 24 0 SHEET 2 AA8 2 LEU B 32 THR B 33 -1 O THR B 33 N PHE B 23 SHEET 1 AA9 5 HIS B 137 SER B 141 0 SHEET 2 AA9 5 THR B 118 ILE B 122 1 N VAL B 119 O VAL B 139 SHEET 3 AA9 5 ALA B 158 PRO B 162 1 O MET B 160 N ALA B 120 SHEET 4 AA9 5 VAL B 97 ARG B 102 -1 N VAL B 100 O THR B 159 SHEET 5 AA9 5 PHE B 180 ARG B 185 -1 O LYS B 181 N VAL B 101 SSBOND 1 CYS A 212 CYS A 239 1555 1555 2.04 SSBOND 2 CYS B 212 CYS B 239 1555 1555 2.01 CISPEP 1 PRO A 19 PRO A 20 0 4.23 CISPEP 2 PRO B 19 PRO B 20 0 -2.17 CISPEP 3 LEU B 134 LYS B 135 0 -23.88 SITE 1 AC1 4 GLU A 171 ARG A 226 TYR A 227 PHE A 228 SITE 1 AC2 4 ARG A 173 PRO A 174 HIS A 175 ASP A 176 SITE 1 AC3 3 GLU A 31 LEU A 32 ARG A 155 SITE 1 AC4 11 ALA A 77 ARG A 82 HIS A 95 VAL A 97 SITE 2 AC4 11 THR A 125 ASP A 126 LEU A 127 SER A 190 SITE 3 AC4 11 EDO A 306 ACT A 314 SER B 240 SITE 1 AC5 3 SER A 8 ASN A 48 LYS A 50 SITE 1 AC6 2 VAL A 58 ARG A 304 SITE 1 AC7 4 THR A 14 ASP A 15 VAL A 74 ASN A 75 SITE 1 AC8 4 ASP A 116 PHE A 140 SER A 141 HIS A 142 SITE 1 AC9 3 ARG A 197 ASN A 200 ASN B 231 SITE 1 AD1 4 PRO A 91 HIS A 215 PRO A 237 ALA B 191 SITE 1 AD2 5 HIS A 137 HIS A 142 ASN A 143 GLU A 145 SITE 2 AD2 5 HOH A 406 SITE 1 AD3 2 ALA A 25 GLN A 26 SITE 1 AD4 2 ARG A 226 HOH A 408 SITE 1 AD5 4 MET A 186 SER A 190 ARG A 304 SER B 241 SITE 1 AD6 8 ARG B 29 VAL B 58 GLN B 121 LEU B 123 SITE 2 AD6 8 GLY B 124 THR B 125 ASP B 126 SER B 128 SITE 1 AD7 2 SER B 234 SER B 235 SITE 1 AD8 3 LYS A 154 PRO B 174 HIS B 175 SITE 1 AD9 2 LYS B 222 ARG B 226 SITE 1 AE1 5 ILE B 90 HIS B 215 PRO B 237 GLY B 238 SITE 2 AE1 5 CYS B 239 SITE 1 AE2 4 GLU B 171 ASP B 225 TYR B 227 PHE B 228 SITE 1 AE3 2 ILE B 62 ARG B 82 CRYST1 46.342 86.000 123.832 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021579 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011628 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008075 0.00000