HEADER DNA BINDING PROTEIN 23-JUL-18 6ABQ TITLE CRYSTAL STRUCTURE OF TRANSCRIPTION FACTOR FROM LISTERIA MONOCYTOGENES COMPND MOL_ID: 1; COMPND 2 MOLECULE: PADR FAMILY TRANSCRIPTIONAL REGULATOR; COMPND 3 CHAIN: B, A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LISTERIA MONOCYTOGENES; SOURCE 3 ORGANISM_TAXID: 1639; SOURCE 4 GENE: C7K50_07245, CDR86_13565, LMNIHS28_00834; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS BACTERIA, PADR, TRANSCRIPTION FACTOR, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.LEE,M.HONG REVDAT 2 22-NOV-23 6ABQ 1 REMARK REVDAT 1 05-JUN-19 6ABQ 0 JRNL AUTH C.LEE,M.I.KIM,J.PARK,M.HONG JRNL TITL STRUCTURE-BASED MOLECULAR CHARACTERIZATION AND REGULATORY JRNL TITL 2 MECHANISM OF THE LFTR TRANSCRIPTION FACTOR FROM LISTERIA JRNL TITL 3 MONOCYTOGENES: CONFORMATIONAL FLEXIBILITIES AND A JRNL TITL 4 LIGAND-INDUCED REGULATORY MECHANISM. JRNL REF PLOS ONE V. 14 15017 2019 JRNL REFN ESSN 1932-6203 JRNL PMID 30970033 JRNL DOI 10.1371/JOURNAL.PONE.0215017 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0103 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 9111 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 486 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 659 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2050 REMARK 3 BIN FREE R VALUE SET COUNT : 34 REMARK 3 BIN FREE R VALUE : 0.3140 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1742 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 129 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.59 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.14000 REMARK 3 B22 (A**2) : 0.14000 REMARK 3 B33 (A**2) : -0.45000 REMARK 3 B12 (A**2) : 0.07000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.542 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.271 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.917 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.874 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1811 ; 0.009 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2434 ; 1.314 ; 2.002 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 225 ; 5.063 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 77 ;33.787 ;24.416 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 368 ;16.120 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;19.890 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 263 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1318 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -4 A 13 REMARK 3 ORIGIN FOR THE GROUP (A): 24.0290 95.9100 0.9590 REMARK 3 T TENSOR REMARK 3 T11: 0.2238 T22: 0.1716 REMARK 3 T33: 0.1254 T12: -0.0433 REMARK 3 T13: 0.0027 T23: -0.0137 REMARK 3 L TENSOR REMARK 3 L11: 5.4868 L22: 2.5095 REMARK 3 L33: 1.3982 L12: 3.3257 REMARK 3 L13: 1.5382 L23: 0.7171 REMARK 3 S TENSOR REMARK 3 S11: -0.2116 S12: 0.0614 S13: 0.5582 REMARK 3 S21: 0.1178 S22: -0.0310 S23: 0.3050 REMARK 3 S31: 0.1090 S32: 0.0137 S33: 0.2425 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 14 A 38 REMARK 3 ORIGIN FOR THE GROUP (A): 36.4270 105.3560 -4.9030 REMARK 3 T TENSOR REMARK 3 T11: 0.0694 T22: 0.0383 REMARK 3 T33: 0.0128 T12: -0.0255 REMARK 3 T13: -0.0108 T23: 0.0034 REMARK 3 L TENSOR REMARK 3 L11: 4.3186 L22: 1.5423 REMARK 3 L33: 2.6210 L12: -0.2529 REMARK 3 L13: -0.1340 L23: 0.1572 REMARK 3 S TENSOR REMARK 3 S11: -0.1925 S12: 0.2543 S13: -0.0551 REMARK 3 S21: -0.1171 S22: 0.1360 S23: 0.1165 REMARK 3 S31: 0.0588 S32: -0.1234 S33: 0.0564 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 39 A 81 REMARK 3 ORIGIN FOR THE GROUP (A): 41.2210 108.8380 1.4370 REMARK 3 T TENSOR REMARK 3 T11: 0.0724 T22: 0.0762 REMARK 3 T33: 0.0080 T12: -0.0158 REMARK 3 T13: -0.0035 T23: -0.0142 REMARK 3 L TENSOR REMARK 3 L11: 1.7934 L22: 2.2494 REMARK 3 L33: 1.0070 L12: -0.8436 REMARK 3 L13: 0.2678 L23: -0.6790 REMARK 3 S TENSOR REMARK 3 S11: -0.0848 S12: 0.0549 S13: 0.0097 REMARK 3 S21: 0.0454 S22: 0.0069 S23: -0.0697 REMARK 3 S31: -0.0148 S32: -0.0566 S33: 0.0780 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 82 A 99 REMARK 3 ORIGIN FOR THE GROUP (A): 41.2390 88.1730 -2.4900 REMARK 3 T TENSOR REMARK 3 T11: 0.1194 T22: 0.0638 REMARK 3 T33: 0.1141 T12: 0.0200 REMARK 3 T13: 0.0353 T23: -0.0139 REMARK 3 L TENSOR REMARK 3 L11: 5.9284 L22: 10.3952 REMARK 3 L33: 1.0900 L12: 6.3853 REMARK 3 L13: -1.4061 L23: -1.1633 REMARK 3 S TENSOR REMARK 3 S11: 0.0773 S12: 0.1403 S13: -0.4463 REMARK 3 S21: 0.1029 S22: 0.0358 S23: -0.3851 REMARK 3 S31: -0.1383 S32: 0.0076 S33: -0.1131 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 100 A 105 REMARK 3 ORIGIN FOR THE GROUP (A): 27.3380 77.8770 -2.0040 REMARK 3 T TENSOR REMARK 3 T11: 0.1679 T22: 0.0681 REMARK 3 T33: 0.1671 T12: 0.0276 REMARK 3 T13: -0.0336 T23: -0.0458 REMARK 3 L TENSOR REMARK 3 L11: 7.9962 L22: 3.4168 REMARK 3 L33: 5.9428 L12: 2.1469 REMARK 3 L13: 2.6535 L23: -3.0612 REMARK 3 S TENSOR REMARK 3 S11: -0.1235 S12: 0.1954 S13: -0.0938 REMARK 3 S21: -0.2524 S22: 0.1187 S23: 0.0022 REMARK 3 S31: 0.1868 S32: -0.0565 S33: 0.0047 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 3 B 9 REMARK 3 ORIGIN FOR THE GROUP (A): 36.9360 87.5830 7.5050 REMARK 3 T TENSOR REMARK 3 T11: 0.1117 T22: 0.1461 REMARK 3 T33: 0.1070 T12: -0.0094 REMARK 3 T13: -0.0269 T23: 0.0277 REMARK 3 L TENSOR REMARK 3 L11: 4.6625 L22: 6.7971 REMARK 3 L33: 6.5119 L12: -5.5190 REMARK 3 L13: -4.2522 L23: 4.2471 REMARK 3 S TENSOR REMARK 3 S11: 0.0315 S12: -0.0018 S13: 0.0287 REMARK 3 S21: 0.0459 S22: -0.1332 S23: -0.0908 REMARK 3 S31: -0.3661 S32: 0.2621 S33: 0.1017 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 10 B 36 REMARK 3 ORIGIN FOR THE GROUP (A): 26.2890 75.2500 9.9980 REMARK 3 T TENSOR REMARK 3 T11: 0.0548 T22: 0.0316 REMARK 3 T33: 0.0635 T12: 0.0156 REMARK 3 T13: 0.0220 T23: -0.0084 REMARK 3 L TENSOR REMARK 3 L11: 6.2164 L22: 3.9233 REMARK 3 L33: 3.7651 L12: -1.0507 REMARK 3 L13: -0.5645 L23: -1.0029 REMARK 3 S TENSOR REMARK 3 S11: -0.1697 S12: 0.0087 S13: -0.2630 REMARK 3 S21: -0.0999 S22: 0.0466 S23: -0.3971 REMARK 3 S31: 0.1991 S32: 0.2917 S33: 0.1231 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 37 B 56 REMARK 3 ORIGIN FOR THE GROUP (A): 29.7450 80.8760 14.9680 REMARK 3 T TENSOR REMARK 3 T11: 0.1153 T22: 0.1199 REMARK 3 T33: 0.0673 T12: -0.0359 REMARK 3 T13: -0.0161 T23: -0.0142 REMARK 3 L TENSOR REMARK 3 L11: 9.3558 L22: 1.7917 REMARK 3 L33: 1.0122 L12: -1.4623 REMARK 3 L13: 0.2705 L23: -0.4774 REMARK 3 S TENSOR REMARK 3 S11: 0.1124 S12: -0.4638 S13: 0.1180 REMARK 3 S21: -0.0315 S22: -0.0594 S23: -0.2832 REMARK 3 S31: 0.0632 S32: 0.2645 S33: -0.0529 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 57 B 90 REMARK 3 ORIGIN FOR THE GROUP (A): 17.7700 76.4070 14.2990 REMARK 3 T TENSOR REMARK 3 T11: 0.0470 T22: 0.0289 REMARK 3 T33: 0.0478 T12: 0.0074 REMARK 3 T13: 0.0016 T23: -0.0173 REMARK 3 L TENSOR REMARK 3 L11: 1.2413 L22: 4.4719 REMARK 3 L33: 4.7196 L12: 0.3776 REMARK 3 L13: 0.1402 L23: -3.6240 REMARK 3 S TENSOR REMARK 3 S11: -0.0012 S12: -0.0753 S13: -0.1223 REMARK 3 S21: -0.0248 S22: -0.0452 S23: -0.0449 REMARK 3 S31: 0.2455 S32: 0.0643 S33: 0.0464 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 91 B 108 REMARK 3 ORIGIN FOR THE GROUP (A): 28.7380 91.9870 -7.5440 REMARK 3 T TENSOR REMARK 3 T11: 0.1197 T22: 0.0767 REMARK 3 T33: 0.0810 T12: 0.0189 REMARK 3 T13: 0.0078 T23: -0.0055 REMARK 3 L TENSOR REMARK 3 L11: 10.4903 L22: 1.3286 REMARK 3 L33: 8.2550 L12: 3.6162 REMARK 3 L13: -8.6296 L23: -3.2443 REMARK 3 S TENSOR REMARK 3 S11: -0.1747 S12: 0.2239 S13: -0.4688 REMARK 3 S21: -0.0738 S22: 0.0330 S23: -0.1095 REMARK 3 S31: 0.0863 S32: -0.1446 S33: 0.1416 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 6ABQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-JUL-18. REMARK 100 THE DEPOSITION ID IS D_1300008475. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 173 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 7A (6B, 6C1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0003 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 1 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9616 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 64.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : 0.04500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.30 REMARK 200 R MERGE FOR SHELL (I) : 0.07500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4ESF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1 M LITHIUM CHLORIDE, 0.1 M CITRIC REMARK 280 ACID, PH 5.5, AND 30% POLYETHYLENE GLYCOL 6000, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.20867 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 22.10433 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 22.10433 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 44.20867 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3410 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11800 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B -5 REMARK 465 SER B -4 REMARK 465 ALA B -3 REMARK 465 LYS B -2 REMARK 465 ASP B -1 REMARK 465 PRO B 0 REMARK 465 MET B 1 REMARK 465 LYS B 2 REMARK 465 GLY A 106 REMARK 465 GLN A 107 REMARK 465 ALA A 108 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 1 65.44 66.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL A 201 DBREF 6ABQ B 1 108 UNP L8DXR9 L8DXR9_LISMN 1 108 DBREF 6ABQ A 1 108 UNP L8DXR9 L8DXR9_LISMN 1 108 SEQADV 6ABQ GLY B -5 UNP L8DXR9 EXPRESSION TAG SEQADV 6ABQ SER B -4 UNP L8DXR9 EXPRESSION TAG SEQADV 6ABQ ALA B -3 UNP L8DXR9 EXPRESSION TAG SEQADV 6ABQ LYS B -2 UNP L8DXR9 EXPRESSION TAG SEQADV 6ABQ ASP B -1 UNP L8DXR9 EXPRESSION TAG SEQADV 6ABQ PRO B 0 UNP L8DXR9 EXPRESSION TAG SEQADV 6ABQ GLY A -5 UNP L8DXR9 EXPRESSION TAG SEQADV 6ABQ SER A -4 UNP L8DXR9 EXPRESSION TAG SEQADV 6ABQ ALA A -3 UNP L8DXR9 EXPRESSION TAG SEQADV 6ABQ LYS A -2 UNP L8DXR9 EXPRESSION TAG SEQADV 6ABQ ASP A -1 UNP L8DXR9 EXPRESSION TAG SEQADV 6ABQ PRO A 0 UNP L8DXR9 EXPRESSION TAG SEQRES 1 B 114 GLY SER ALA LYS ASP PRO MET LYS GLY LEU THR GLU LEU SEQRES 2 B 114 LEU LYS GLY SER LEU GLU GLY MET ILE LEU GLU ARG ILE SEQRES 3 B 114 SER ARG GLY GLU THR TYR GLY TYR GLU ILE THR LYS TYR SEQRES 4 B 114 LEU ASN ASP LEU GLY PHE ASP GLU ILE VAL GLU GLY THR SEQRES 5 B 114 VAL TYR THR ILE LEU VAL ARG LEU GLU LYS LYS GLY LEU SEQRES 6 B 114 VAL GLU ILE GLU LYS LYS LYS SER GLU LEU GLY PRO PRO SEQRES 7 B 114 ARG LYS PHE TYR THR LEU SER PRO ALA GLY GLU GLU GLU SEQRES 8 B 114 LEU ALA ILE PHE TRP LYS ARG TRP ASP PHE ILE GLN GLY SEQRES 9 B 114 LYS ILE MET GLN VAL LYS GLY GLY GLN ALA SEQRES 1 A 114 GLY SER ALA LYS ASP PRO MET LYS GLY LEU THR GLU LEU SEQRES 2 A 114 LEU LYS GLY SER LEU GLU GLY MET ILE LEU GLU ARG ILE SEQRES 3 A 114 SER ARG GLY GLU THR TYR GLY TYR GLU ILE THR LYS TYR SEQRES 4 A 114 LEU ASN ASP LEU GLY PHE ASP GLU ILE VAL GLU GLY THR SEQRES 5 A 114 VAL TYR THR ILE LEU VAL ARG LEU GLU LYS LYS GLY LEU SEQRES 6 A 114 VAL GLU ILE GLU LYS LYS LYS SER GLU LEU GLY PRO PRO SEQRES 7 A 114 ARG LYS PHE TYR THR LEU SER PRO ALA GLY GLU GLU GLU SEQRES 8 A 114 LEU ALA ILE PHE TRP LYS ARG TRP ASP PHE ILE GLN GLY SEQRES 9 A 114 LYS ILE MET GLN VAL LYS GLY GLY GLN ALA HET CL B 201 1 HET CL A 201 1 HETNAM CL CHLORIDE ION FORMUL 3 CL 2(CL 1-) FORMUL 5 HOH *129(H2 O) HELIX 1 AA1 LEU B 4 LYS B 9 1 6 HELIX 2 AA2 SER B 11 ARG B 22 1 12 HELIX 3 AA3 TYR B 26 GLY B 38 1 13 HELIX 4 AA4 VAL B 43 LYS B 57 1 15 HELIX 5 AA5 SER B 79 GLY B 105 1 27 HELIX 6 AA6 THR A 5 LYS A 9 5 5 HELIX 7 AA7 GLY A 10 ARG A 22 1 13 HELIX 8 AA8 TYR A 26 LEU A 37 1 12 HELIX 9 AA9 VAL A 43 LYS A 57 1 15 HELIX 10 AB1 SER A 79 GLY A 105 1 27 SHEET 1 AA1 2 VAL B 60 LYS B 66 0 SHEET 2 AA1 2 PRO B 72 LEU B 78 -1 O PHE B 75 N GLU B 63 SHEET 1 AA2 2 VAL A 60 LYS A 66 0 SHEET 2 AA2 2 PRO A 72 LEU A 78 -1 O PHE A 75 N GLU A 63 SITE 1 AC1 2 GLY B 45 LYS B 74 SITE 1 AC2 3 ALA A -3 LYS A 74 HOH A 306 CRYST1 73.955 73.955 66.313 90.00 90.00 120.00 P 32 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013522 0.007807 0.000000 0.00000 SCALE2 0.000000 0.015614 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015080 0.00000