data_6ACE # _entry.id 6ACE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.312 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6ACE WWPDB D_1300008516 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6ACE _pdbx_database_status.recvd_initial_deposition_date 2018-07-26 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Hang, T.R.' 1 ? 'Chen, W.B.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country ? _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'To Be Published' _citation.journal_id_ASTM ? _citation.journal_id_CSD 0353 _citation.journal_id_ISSN ? _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume ? _citation.language ? _citation.page_first ? _citation.page_last ? _citation.title 'complex structure of histone lysine desuccinylase Sirt5 with succinyl peptide H3K122' _citation.year ? _citation.database_id_CSD ? _citation.pdbx_database_id_DOI ? _citation.pdbx_database_id_PubMed ? _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hang, T.R.' 1 ? primary 'Chen, W.B.' 2 ? primary 'Zang, J.Y.' 3 ? primary 'Zhang, X.' 4 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 94.69 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6ACE _cell.details ? _cell.formula_units_Z ? _cell.length_a 123.227 _cell.length_a_esd ? _cell.length_b 41.169 _cell.length_b_esd ? _cell.length_c 55.854 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6ACE _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'NAD-dependent protein deacylase sirtuin-5, mitochondrial' 29054.121 1 3.5.1.- ? 'UNP residues 36-302' ? 2 polymer syn 'succinyl peptide H3K122' 1045.207 1 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 5 water nat water 18.015 121 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'histone lysine desuccinylase Sirt5' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;PSSSMADFRKFFAKAKHIVIISGAGVSAESGVPTFRGAGGYWRKWQAQDLATPLAFAHNPSRVWEFYHYRREVMGSKEPN AGHRAIAECETRLGKQGRRVVVITQNIDELHRKAGTKNLLEIHGSLFKTRCTSCGVVAENYKSPICPALSGKGAPEPGTQ DASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFN TETTPATNRFRFHFQGPCGTTLPEALA ; ;PSSSMADFRKFFAKAKHIVIISGAGVSAESGVPTFRGAGGYWRKWQAQDLATPLAFAHNPSRVWEFYHYRREVMGSKEPN AGHRAIAECETRLGKQGRRVVVITQNIDELHRKAGTKNLLEIHGSLFKTRCTSCGVVAENYKSPICPALSGKGAPEPGTQ DASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFN TETTPATNRFRFHFQGPCGTTLPEALA ; A ? 2 'polypeptide(L)' no yes 'TIMP(SLL)DIQ' TIMPXDIQ B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 SER n 1 3 SER n 1 4 SER n 1 5 MET n 1 6 ALA n 1 7 ASP n 1 8 PHE n 1 9 ARG n 1 10 LYS n 1 11 PHE n 1 12 PHE n 1 13 ALA n 1 14 LYS n 1 15 ALA n 1 16 LYS n 1 17 HIS n 1 18 ILE n 1 19 VAL n 1 20 ILE n 1 21 ILE n 1 22 SER n 1 23 GLY n 1 24 ALA n 1 25 GLY n 1 26 VAL n 1 27 SER n 1 28 ALA n 1 29 GLU n 1 30 SER n 1 31 GLY n 1 32 VAL n 1 33 PRO n 1 34 THR n 1 35 PHE n 1 36 ARG n 1 37 GLY n 1 38 ALA n 1 39 GLY n 1 40 GLY n 1 41 TYR n 1 42 TRP n 1 43 ARG n 1 44 LYS n 1 45 TRP n 1 46 GLN n 1 47 ALA n 1 48 GLN n 1 49 ASP n 1 50 LEU n 1 51 ALA n 1 52 THR n 1 53 PRO n 1 54 LEU n 1 55 ALA n 1 56 PHE n 1 57 ALA n 1 58 HIS n 1 59 ASN n 1 60 PRO n 1 61 SER n 1 62 ARG n 1 63 VAL n 1 64 TRP n 1 65 GLU n 1 66 PHE n 1 67 TYR n 1 68 HIS n 1 69 TYR n 1 70 ARG n 1 71 ARG n 1 72 GLU n 1 73 VAL n 1 74 MET n 1 75 GLY n 1 76 SER n 1 77 LYS n 1 78 GLU n 1 79 PRO n 1 80 ASN n 1 81 ALA n 1 82 GLY n 1 83 HIS n 1 84 ARG n 1 85 ALA n 1 86 ILE n 1 87 ALA n 1 88 GLU n 1 89 CYS n 1 90 GLU n 1 91 THR n 1 92 ARG n 1 93 LEU n 1 94 GLY n 1 95 LYS n 1 96 GLN n 1 97 GLY n 1 98 ARG n 1 99 ARG n 1 100 VAL n 1 101 VAL n 1 102 VAL n 1 103 ILE n 1 104 THR n 1 105 GLN n 1 106 ASN n 1 107 ILE n 1 108 ASP n 1 109 GLU n 1 110 LEU n 1 111 HIS n 1 112 ARG n 1 113 LYS n 1 114 ALA n 1 115 GLY n 1 116 THR n 1 117 LYS n 1 118 ASN n 1 119 LEU n 1 120 LEU n 1 121 GLU n 1 122 ILE n 1 123 HIS n 1 124 GLY n 1 125 SER n 1 126 LEU n 1 127 PHE n 1 128 LYS n 1 129 THR n 1 130 ARG n 1 131 CYS n 1 132 THR n 1 133 SER n 1 134 CYS n 1 135 GLY n 1 136 VAL n 1 137 VAL n 1 138 ALA n 1 139 GLU n 1 140 ASN n 1 141 TYR n 1 142 LYS n 1 143 SER n 1 144 PRO n 1 145 ILE n 1 146 CYS n 1 147 PRO n 1 148 ALA n 1 149 LEU n 1 150 SER n 1 151 GLY n 1 152 LYS n 1 153 GLY n 1 154 ALA n 1 155 PRO n 1 156 GLU n 1 157 PRO n 1 158 GLY n 1 159 THR n 1 160 GLN n 1 161 ASP n 1 162 ALA n 1 163 SER n 1 164 ILE n 1 165 PRO n 1 166 VAL n 1 167 GLU n 1 168 LYS n 1 169 LEU n 1 170 PRO n 1 171 ARG n 1 172 CYS n 1 173 GLU n 1 174 GLU n 1 175 ALA n 1 176 GLY n 1 177 CYS n 1 178 GLY n 1 179 GLY n 1 180 LEU n 1 181 LEU n 1 182 ARG n 1 183 PRO n 1 184 HIS n 1 185 VAL n 1 186 VAL n 1 187 TRP n 1 188 PHE n 1 189 GLY n 1 190 GLU n 1 191 ASN n 1 192 LEU n 1 193 ASP n 1 194 PRO n 1 195 ALA n 1 196 ILE n 1 197 LEU n 1 198 GLU n 1 199 GLU n 1 200 VAL n 1 201 ASP n 1 202 ARG n 1 203 GLU n 1 204 LEU n 1 205 ALA n 1 206 HIS n 1 207 CYS n 1 208 ASP n 1 209 LEU n 1 210 CYS n 1 211 LEU n 1 212 VAL n 1 213 VAL n 1 214 GLY n 1 215 THR n 1 216 SER n 1 217 SER n 1 218 VAL n 1 219 VAL n 1 220 TYR n 1 221 PRO n 1 222 ALA n 1 223 ALA n 1 224 MET n 1 225 PHE n 1 226 ALA n 1 227 PRO n 1 228 GLN n 1 229 VAL n 1 230 ALA n 1 231 ALA n 1 232 ARG n 1 233 GLY n 1 234 VAL n 1 235 PRO n 1 236 VAL n 1 237 ALA n 1 238 GLU n 1 239 PHE n 1 240 ASN n 1 241 THR n 1 242 GLU n 1 243 THR n 1 244 THR n 1 245 PRO n 1 246 ALA n 1 247 THR n 1 248 ASN n 1 249 ARG n 1 250 PHE n 1 251 ARG n 1 252 PHE n 1 253 HIS n 1 254 PHE n 1 255 GLN n 1 256 GLY n 1 257 PRO n 1 258 CYS n 1 259 GLY n 1 260 THR n 1 261 THR n 1 262 LEU n 1 263 PRO n 1 264 GLU n 1 265 ALA n 1 266 LEU n 1 267 ALA n 2 1 THR n 2 2 ILE n 2 3 MET n 2 4 PRO n 2 5 SLL n 2 6 ASP n 2 7 ILE n 2 8 GLN n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 267 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene SIRT5 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 8 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP SIR5_HUMAN Q9NXA8 ? 1 ;PSSSMADFRKFFAKAKHIVIISGAGVSAESGVPTFRGAGGYWRKWQAQDLATPLAFAHNPSRVWEFYHYRREVMGSKEPN AGHRAIAECETRLGKQGRRVVVITQNIDELHRKAGTKNLLEIHGSLFKTRCTSCGVVAENYKSPICPALSGKGAPEPGTQ DASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILEEVDRELAHCDLCLVVGTSSVVYPAAMFAPQVAARGVPVAEFN TETTPATNRFRFHFQGPCGTTLPEALA ; 36 2 PDB 6ACE 6ACE ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6ACE A 1 ? 267 ? Q9NXA8 36 ? 302 ? 36 302 2 2 6ACE B 1 ? 8 ? 6ACE 118 ? 125 ? 118 125 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SLL 'L-peptide linking' n '(2S)-2-azanyl-6-[(4-hydroxy-4-oxo-butanoyl)amino]hexanoic acid' 6-N-succinyl-L-lysine 'C10 H18 N2 O5' 246.260 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6ACE _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.35 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 47.61 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.1M sodium cacodylate (pH 5.5), 25%(w/v) PEG 4000' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS3 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2018-03-25 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9793 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRF BEAMLINE BL19U1' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.9793 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL19U1 _diffrn_source.pdbx_synchrotron_site SSRF # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6ACE _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.98 _reflns.d_resolution_low 61.41 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 18297 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 92.6 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 4.5 _reflns.pdbx_Rmerge_I_obs 0.107 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 11.0 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.98 _reflns_shell.d_res_low 2.01 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 674 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.516 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] 0.03 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.09 _refine.aniso_B[2][2] -0.08 _refine.aniso_B[2][3] 0.00 _refine.aniso_B[3][3] 0.07 _refine.B_iso_max ? _refine.B_iso_mean 30.467 _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc 0.938 _refine.correlation_coeff_Fo_to_Fc_free 0.896 _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6ACE _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.98 _refine.ls_d_res_low 61.41 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 15569 _refine.ls_number_reflns_R_free 862 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 82.91 _refine.ls_percent_reflns_R_free 5.2 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.20609 _refine.ls_R_factor_R_free 0.26634 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.20269 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 3RIY _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.255 _refine.pdbx_overall_ESU_R_Free 0.217 _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 5.122 _refine.overall_SU_ML 0.143 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id 1 _refine_hist.pdbx_number_atoms_protein 2113 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 13 _refine_hist.number_atoms_solvent 121 _refine_hist.number_atoms_total 2247 _refine_hist.d_res_high 1.98 _refine_hist.d_res_low 61.41 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.016 0.019 2187 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.003 0.020 2078 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.850 1.963 2957 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.068 3.002 4779 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 6.803 5.000 273 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 35.590 22.796 93 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 14.156 15.000 340 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 14.812 15.000 18 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.101 0.200 320 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.009 0.021 2470 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 503 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_nbtor_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_xyhbond_nbd_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_vdw_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_hbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_refined ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_symmetry_metal_ion_other ? ? 'X-RAY DIFFRACTION' ? 2.585 2.867 1103 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 2.585 2.865 1102 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 3.929 4.298 1371 ? r_mcangle_it ? ? 'X-RAY DIFFRACTION' ? 3.928 4.300 1372 ? r_mcangle_other ? ? 'X-RAY DIFFRACTION' ? 2.906 3.159 1084 ? r_scbond_it ? ? 'X-RAY DIFFRACTION' ? 2.901 3.159 1084 ? r_scbond_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_scangle_it ? ? 'X-RAY DIFFRACTION' ? 4.608 4.596 1586 ? r_scangle_other ? ? 'X-RAY DIFFRACTION' ? 7.389 23.517 2492 ? r_long_range_B_refined ? ? 'X-RAY DIFFRACTION' ? 7.391 23.518 2492 ? r_long_range_B_other ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_rigid_bond_restr ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_free ? ? 'X-RAY DIFFRACTION' ? ? ? ? ? r_sphericity_bonded ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.977 _refine_ls_shell.d_res_low 2.028 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 42 _refine_ls_shell.number_reflns_R_work 498 _refine_ls_shell.percent_reflns_obs 37.53 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.298 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.259 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6ACE _struct.title 'histone lysine desuccinylase Sirt5 in complex with succinyl peptide H3K122' _struct.pdbx_descriptor 'NAD-dependent protein deacylase sirtuin-5, mitochondrial (E.C.3.5.1.-), THR-ILE-MET-PRO-SLL-ASP-ILE-GLN' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6ACE _struct_keywords.text 'histone lysine desuccinylase Sirt5 in complex with succinyl peptide H3K122, HYDROLASE' _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 5 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 4 ? ALA A 15 ? SER A 39 ALA A 50 1 ? 12 HELX_P HELX_P2 AA2 GLY A 23 ? GLU A 29 ? GLY A 58 GLU A 64 1 ? 7 HELX_P HELX_P3 AA3 GLN A 46 ? ALA A 51 ? GLN A 81 ALA A 86 1 ? 6 HELX_P HELX_P4 AA4 THR A 52 ? ASN A 59 ? THR A 87 ASN A 94 1 ? 8 HELX_P HELX_P5 AA5 ASN A 59 ? MET A 74 ? ASN A 94 MET A 109 1 ? 16 HELX_P HELX_P6 AA6 GLY A 75 ? LYS A 77 ? GLY A 110 LYS A 112 5 ? 3 HELX_P HELX_P7 AA7 ASN A 80 ? GLN A 96 ? ASN A 115 GLN A 131 1 ? 17 HELX_P HELX_P8 AA8 GLU A 109 ? ALA A 114 ? GLU A 144 ALA A 149 1 ? 6 HELX_P HELX_P9 AA9 CYS A 146 ? SER A 150 ? CYS A 181 SER A 185 5 ? 5 HELX_P HELX_P10 AB1 PRO A 165 ? LEU A 169 ? PRO A 200 LEU A 204 5 ? 5 HELX_P HELX_P11 AB2 ASP A 193 ? HIS A 206 ? ASP A 228 HIS A 241 1 ? 14 HELX_P HELX_P12 AB3 PRO A 221 ? ALA A 223 ? PRO A 256 ALA A 258 5 ? 3 HELX_P HELX_P13 AB4 MET A 224 ? ARG A 232 ? MET A 259 ARG A 267 1 ? 9 HELX_P HELX_P14 AB5 ALA A 246 ? PHE A 250 ? ALA A 281 PHE A 285 5 ? 5 HELX_P HELX_P15 AB6 PRO A 257 ? LEU A 266 ? PRO A 292 LEU A 301 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A CYS 131 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 166 A ZN 401 1_555 ? ? ? ? ? ? ? 2.316 ? metalc2 metalc ? ? A CYS 134 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 169 A ZN 401 1_555 ? ? ? ? ? ? ? 2.365 ? metalc3 metalc ? ? A CYS 172 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 207 A ZN 401 1_555 ? ? ? ? ? ? ? 2.291 ? metalc4 metalc ? ? A CYS 177 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 212 A ZN 401 1_555 ? ? ? ? ? ? ? 2.344 ? covale1 covale both ? B PRO 4 C ? ? ? 1_555 B SLL 5 N ? ? B PRO 121 B SLL 122 1_555 ? ? ? ? ? ? ? 1.360 ? covale2 covale both ? B SLL 5 C ? ? ? 1_555 B ASP 6 N ? ? B SLL 122 B ASP 123 1_555 ? ? ? ? ? ? ? 1.361 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 37 A . ? GLY 72 A ALA 38 A ? ALA 73 A 1 -6.15 2 SER 143 A . ? SER 178 A PRO 144 A ? PRO 179 A 1 2.15 3 TYR 220 A . ? TYR 255 A PRO 221 A ? PRO 256 A 1 -1.53 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 6 ? AA2 ? 3 ? AA3 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA3 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 119 ? GLU A 121 ? LEU A 154 GLU A 156 AA1 2 ARG A 99 ? THR A 104 ? ARG A 134 THR A 139 AA1 3 HIS A 17 ? SER A 22 ? HIS A 52 SER A 57 AA1 4 LEU A 209 ? VAL A 213 ? LEU A 244 VAL A 248 AA1 5 VAL A 236 ? PHE A 239 ? VAL A 271 PHE A 274 AA1 6 PHE A 252 ? PHE A 254 ? PHE A 287 PHE A 289 AA2 1 VAL A 137 ? GLU A 139 ? VAL A 172 GLU A 174 AA2 2 GLY A 124 ? CYS A 131 ? GLY A 159 CYS A 166 AA2 3 LEU A 181 ? VAL A 185 ? LEU A 216 VAL A 220 AA3 1 VAL A 219 ? TYR A 220 ? VAL A 254 TYR A 255 AA3 2 ASP B 6 ? ILE B 7 ? ASP B 123 ILE B 124 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O LEU A 120 ? O LEU A 155 N VAL A 102 ? N VAL A 137 AA1 2 3 O ARG A 99 ? O ARG A 134 N ILE A 18 ? N ILE A 53 AA1 3 4 N ILE A 21 ? N ILE A 56 O LEU A 211 ? O LEU A 246 AA1 4 5 N CYS A 210 ? N CYS A 245 O ALA A 237 ? O ALA A 272 AA1 5 6 N GLU A 238 ? N GLU A 273 O PHE A 254 ? O PHE A 289 AA2 1 2 O ALA A 138 ? O ALA A 173 N THR A 129 ? N THR A 164 AA2 2 3 N LYS A 128 ? N LYS A 163 O HIS A 184 ? O HIS A 219 AA3 1 2 N TYR A 220 ? N TYR A 255 O ASP B 6 ? O ASP B 123 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 401 ? 4 'binding site for residue ZN A 401' AC2 Software A GOL 402 ? 8 'binding site for residue GOL A 402' AC3 Software A GOL 403 ? 5 'binding site for residue GOL A 403' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 131 ? CYS A 166 . ? 1_555 ? 2 AC1 4 CYS A 134 ? CYS A 169 . ? 1_555 ? 3 AC1 4 CYS A 172 ? CYS A 207 . ? 1_555 ? 4 AC1 4 CYS A 177 ? CYS A 212 . ? 1_555 ? 5 AC2 8 ALA A 24 ? ALA A 59 . ? 1_555 ? 6 AC2 8 VAL A 32 ? VAL A 67 . ? 1_555 ? 7 AC2 8 THR A 34 ? THR A 69 . ? 1_555 ? 8 AC2 8 ARG A 70 ? ARG A 105 . ? 1_555 ? 9 AC2 8 ASN A 106 ? ASN A 141 . ? 1_555 ? 10 AC2 8 ILE A 107 ? ILE A 142 . ? 1_555 ? 11 AC2 8 ASP A 108 ? ASP A 143 . ? 1_555 ? 12 AC2 8 HOH F . ? HOH A 516 . ? 1_555 ? 13 AC3 5 GLU A 109 ? GLU A 144 . ? 1_555 ? 14 AC3 5 TYR A 141 ? TYR A 176 . ? 1_555 ? 15 AC3 5 SER A 150 ? SER A 185 . ? 4_446 ? 16 AC3 5 LYS A 152 ? LYS A 187 . ? 4_446 ? 17 AC3 5 HOH F . ? HOH A 505 . ? 1_555 ? # _atom_sites.entry_id 6ACE _atom_sites.fract_transf_matrix[1][1] 0.008115 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000665 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024290 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017964 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 36 36 PRO PRO A . n A 1 2 SER 2 37 37 SER SER A . n A 1 3 SER 3 38 38 SER SER A . n A 1 4 SER 4 39 39 SER SER A . n A 1 5 MET 5 40 40 MET MET A . n A 1 6 ALA 6 41 41 ALA ALA A . n A 1 7 ASP 7 42 42 ASP ASP A . n A 1 8 PHE 8 43 43 PHE PHE A . n A 1 9 ARG 9 44 44 ARG ARG A . n A 1 10 LYS 10 45 45 LYS LYS A . n A 1 11 PHE 11 46 46 PHE PHE A . n A 1 12 PHE 12 47 47 PHE PHE A . n A 1 13 ALA 13 48 48 ALA ALA A . n A 1 14 LYS 14 49 49 LYS LYS A . n A 1 15 ALA 15 50 50 ALA ALA A . n A 1 16 LYS 16 51 51 LYS LYS A . n A 1 17 HIS 17 52 52 HIS HIS A . n A 1 18 ILE 18 53 53 ILE ILE A . n A 1 19 VAL 19 54 54 VAL VAL A . n A 1 20 ILE 20 55 55 ILE ILE A . n A 1 21 ILE 21 56 56 ILE ILE A . n A 1 22 SER 22 57 57 SER SER A . n A 1 23 GLY 23 58 58 GLY GLY A . n A 1 24 ALA 24 59 59 ALA ALA A . n A 1 25 GLY 25 60 60 GLY GLY A . n A 1 26 VAL 26 61 61 VAL VAL A . n A 1 27 SER 27 62 62 SER SER A . n A 1 28 ALA 28 63 63 ALA ALA A . n A 1 29 GLU 29 64 64 GLU GLU A . n A 1 30 SER 30 65 65 SER SER A . n A 1 31 GLY 31 66 66 GLY GLY A . n A 1 32 VAL 32 67 67 VAL VAL A . n A 1 33 PRO 33 68 68 PRO PRO A . n A 1 34 THR 34 69 69 THR THR A . n A 1 35 PHE 35 70 70 PHE PHE A . n A 1 36 ARG 36 71 71 ARG ARG A . n A 1 37 GLY 37 72 72 GLY GLY A . n A 1 38 ALA 38 73 73 ALA ALA A . n A 1 39 GLY 39 74 74 GLY GLY A . n A 1 40 GLY 40 75 75 GLY GLY A . n A 1 41 TYR 41 76 76 TYR TYR A . n A 1 42 TRP 42 77 77 TRP TRP A . n A 1 43 ARG 43 78 78 ARG ARG A . n A 1 44 LYS 44 79 79 LYS LYS A . n A 1 45 TRP 45 80 80 TRP TRP A . n A 1 46 GLN 46 81 81 GLN GLN A . n A 1 47 ALA 47 82 82 ALA ALA A . n A 1 48 GLN 48 83 83 GLN GLN A . n A 1 49 ASP 49 84 84 ASP ASP A . n A 1 50 LEU 50 85 85 LEU LEU A . n A 1 51 ALA 51 86 86 ALA ALA A . n A 1 52 THR 52 87 87 THR THR A . n A 1 53 PRO 53 88 88 PRO PRO A . n A 1 54 LEU 54 89 89 LEU LEU A . n A 1 55 ALA 55 90 90 ALA ALA A . n A 1 56 PHE 56 91 91 PHE PHE A . n A 1 57 ALA 57 92 92 ALA ALA A . n A 1 58 HIS 58 93 93 HIS HIS A . n A 1 59 ASN 59 94 94 ASN ASN A . n A 1 60 PRO 60 95 95 PRO PRO A . n A 1 61 SER 61 96 96 SER SER A . n A 1 62 ARG 62 97 97 ARG ARG A . n A 1 63 VAL 63 98 98 VAL VAL A . n A 1 64 TRP 64 99 99 TRP TRP A . n A 1 65 GLU 65 100 100 GLU GLU A . n A 1 66 PHE 66 101 101 PHE PHE A . n A 1 67 TYR 67 102 102 TYR TYR A . n A 1 68 HIS 68 103 103 HIS HIS A . n A 1 69 TYR 69 104 104 TYR TYR A . n A 1 70 ARG 70 105 105 ARG ARG A . n A 1 71 ARG 71 106 106 ARG ARG A . n A 1 72 GLU 72 107 107 GLU GLU A . n A 1 73 VAL 73 108 108 VAL VAL A . n A 1 74 MET 74 109 109 MET MET A . n A 1 75 GLY 75 110 110 GLY GLY A . n A 1 76 SER 76 111 111 SER SER A . n A 1 77 LYS 77 112 112 LYS LYS A . n A 1 78 GLU 78 113 113 GLU GLU A . n A 1 79 PRO 79 114 114 PRO PRO A . n A 1 80 ASN 80 115 115 ASN ASN A . n A 1 81 ALA 81 116 116 ALA ALA A . n A 1 82 GLY 82 117 117 GLY GLY A . n A 1 83 HIS 83 118 118 HIS HIS A . n A 1 84 ARG 84 119 119 ARG ARG A . n A 1 85 ALA 85 120 120 ALA ALA A . n A 1 86 ILE 86 121 121 ILE ILE A . n A 1 87 ALA 87 122 122 ALA ALA A . n A 1 88 GLU 88 123 123 GLU GLU A . n A 1 89 CYS 89 124 124 CYS CYS A . n A 1 90 GLU 90 125 125 GLU GLU A . n A 1 91 THR 91 126 126 THR THR A . n A 1 92 ARG 92 127 127 ARG ARG A . n A 1 93 LEU 93 128 128 LEU LEU A . n A 1 94 GLY 94 129 129 GLY GLY A . n A 1 95 LYS 95 130 130 LYS LYS A . n A 1 96 GLN 96 131 131 GLN GLN A . n A 1 97 GLY 97 132 132 GLY GLY A . n A 1 98 ARG 98 133 133 ARG ARG A . n A 1 99 ARG 99 134 134 ARG ARG A . n A 1 100 VAL 100 135 135 VAL VAL A . n A 1 101 VAL 101 136 136 VAL VAL A . n A 1 102 VAL 102 137 137 VAL VAL A . n A 1 103 ILE 103 138 138 ILE ILE A . n A 1 104 THR 104 139 139 THR THR A . n A 1 105 GLN 105 140 140 GLN GLN A . n A 1 106 ASN 106 141 141 ASN ASN A . n A 1 107 ILE 107 142 142 ILE ILE A . n A 1 108 ASP 108 143 143 ASP ASP A . n A 1 109 GLU 109 144 144 GLU GLU A . n A 1 110 LEU 110 145 145 LEU LEU A . n A 1 111 HIS 111 146 146 HIS HIS A . n A 1 112 ARG 112 147 147 ARG ARG A . n A 1 113 LYS 113 148 148 LYS LYS A . n A 1 114 ALA 114 149 149 ALA ALA A . n A 1 115 GLY 115 150 150 GLY GLY A . n A 1 116 THR 116 151 151 THR THR A . n A 1 117 LYS 117 152 152 LYS LYS A . n A 1 118 ASN 118 153 153 ASN ASN A . n A 1 119 LEU 119 154 154 LEU LEU A . n A 1 120 LEU 120 155 155 LEU LEU A . n A 1 121 GLU 121 156 156 GLU GLU A . n A 1 122 ILE 122 157 157 ILE ILE A . n A 1 123 HIS 123 158 158 HIS HIS A . n A 1 124 GLY 124 159 159 GLY GLY A . n A 1 125 SER 125 160 160 SER SER A . n A 1 126 LEU 126 161 161 LEU LEU A . n A 1 127 PHE 127 162 162 PHE PHE A . n A 1 128 LYS 128 163 163 LYS LYS A . n A 1 129 THR 129 164 164 THR THR A . n A 1 130 ARG 130 165 165 ARG ARG A . n A 1 131 CYS 131 166 166 CYS CYS A . n A 1 132 THR 132 167 167 THR THR A . n A 1 133 SER 133 168 168 SER SER A . n A 1 134 CYS 134 169 169 CYS CYS A . n A 1 135 GLY 135 170 170 GLY GLY A . n A 1 136 VAL 136 171 171 VAL VAL A . n A 1 137 VAL 137 172 172 VAL VAL A . n A 1 138 ALA 138 173 173 ALA ALA A . n A 1 139 GLU 139 174 174 GLU GLU A . n A 1 140 ASN 140 175 175 ASN ASN A . n A 1 141 TYR 141 176 176 TYR TYR A . n A 1 142 LYS 142 177 177 LYS LYS A . n A 1 143 SER 143 178 178 SER SER A . n A 1 144 PRO 144 179 179 PRO PRO A . n A 1 145 ILE 145 180 180 ILE ILE A . n A 1 146 CYS 146 181 181 CYS CYS A . n A 1 147 PRO 147 182 182 PRO PRO A . n A 1 148 ALA 148 183 183 ALA ALA A . n A 1 149 LEU 149 184 184 LEU LEU A . n A 1 150 SER 150 185 185 SER SER A . n A 1 151 GLY 151 186 186 GLY GLY A . n A 1 152 LYS 152 187 187 LYS LYS A . n A 1 153 GLY 153 188 188 GLY GLY A . n A 1 154 ALA 154 189 189 ALA ALA A . n A 1 155 PRO 155 190 190 PRO PRO A . n A 1 156 GLU 156 191 191 GLU GLU A . n A 1 157 PRO 157 192 192 PRO PRO A . n A 1 158 GLY 158 193 193 GLY GLY A . n A 1 159 THR 159 194 194 THR THR A . n A 1 160 GLN 160 195 195 GLN GLN A . n A 1 161 ASP 161 196 196 ASP ASP A . n A 1 162 ALA 162 197 197 ALA ALA A . n A 1 163 SER 163 198 198 SER SER A . n A 1 164 ILE 164 199 199 ILE ILE A . n A 1 165 PRO 165 200 200 PRO PRO A . n A 1 166 VAL 166 201 201 VAL VAL A . n A 1 167 GLU 167 202 202 GLU GLU A . n A 1 168 LYS 168 203 203 LYS LYS A . n A 1 169 LEU 169 204 204 LEU LEU A . n A 1 170 PRO 170 205 205 PRO PRO A . n A 1 171 ARG 171 206 206 ARG ARG A . n A 1 172 CYS 172 207 207 CYS CYS A . n A 1 173 GLU 173 208 208 GLU GLU A . n A 1 174 GLU 174 209 209 GLU GLU A . n A 1 175 ALA 175 210 210 ALA ALA A . n A 1 176 GLY 176 211 211 GLY GLY A . n A 1 177 CYS 177 212 212 CYS CYS A . n A 1 178 GLY 178 213 213 GLY GLY A . n A 1 179 GLY 179 214 214 GLY GLY A . n A 1 180 LEU 180 215 215 LEU LEU A . n A 1 181 LEU 181 216 216 LEU LEU A . n A 1 182 ARG 182 217 217 ARG ARG A . n A 1 183 PRO 183 218 218 PRO PRO A . n A 1 184 HIS 184 219 219 HIS HIS A . n A 1 185 VAL 185 220 220 VAL VAL A . n A 1 186 VAL 186 221 221 VAL VAL A . n A 1 187 TRP 187 222 222 TRP TRP A . n A 1 188 PHE 188 223 223 PHE PHE A . n A 1 189 GLY 189 224 224 GLY GLY A . n A 1 190 GLU 190 225 225 GLU GLU A . n A 1 191 ASN 191 226 226 ASN ASN A . n A 1 192 LEU 192 227 227 LEU LEU A . n A 1 193 ASP 193 228 228 ASP ASP A . n A 1 194 PRO 194 229 229 PRO PRO A . n A 1 195 ALA 195 230 230 ALA ALA A . n A 1 196 ILE 196 231 231 ILE ILE A . n A 1 197 LEU 197 232 232 LEU LEU A . n A 1 198 GLU 198 233 233 GLU GLU A . n A 1 199 GLU 199 234 234 GLU GLU A . n A 1 200 VAL 200 235 235 VAL VAL A . n A 1 201 ASP 201 236 236 ASP ASP A . n A 1 202 ARG 202 237 237 ARG ARG A . n A 1 203 GLU 203 238 238 GLU GLU A . n A 1 204 LEU 204 239 239 LEU LEU A . n A 1 205 ALA 205 240 240 ALA ALA A . n A 1 206 HIS 206 241 241 HIS HIS A . n A 1 207 CYS 207 242 242 CYS CYS A . n A 1 208 ASP 208 243 243 ASP ASP A . n A 1 209 LEU 209 244 244 LEU LEU A . n A 1 210 CYS 210 245 245 CYS CYS A . n A 1 211 LEU 211 246 246 LEU LEU A . n A 1 212 VAL 212 247 247 VAL VAL A . n A 1 213 VAL 213 248 248 VAL VAL A . n A 1 214 GLY 214 249 249 GLY GLY A . n A 1 215 THR 215 250 250 THR THR A . n A 1 216 SER 216 251 251 SER SER A . n A 1 217 SER 217 252 252 SER SER A . n A 1 218 VAL 218 253 253 VAL VAL A . n A 1 219 VAL 219 254 254 VAL VAL A . n A 1 220 TYR 220 255 255 TYR TYR A . n A 1 221 PRO 221 256 256 PRO PRO A . n A 1 222 ALA 222 257 257 ALA ALA A . n A 1 223 ALA 223 258 258 ALA ALA A . n A 1 224 MET 224 259 259 MET MET A . n A 1 225 PHE 225 260 260 PHE PHE A . n A 1 226 ALA 226 261 261 ALA ALA A . n A 1 227 PRO 227 262 262 PRO PRO A . n A 1 228 GLN 228 263 263 GLN GLN A . n A 1 229 VAL 229 264 264 VAL VAL A . n A 1 230 ALA 230 265 265 ALA ALA A . n A 1 231 ALA 231 266 266 ALA ALA A . n A 1 232 ARG 232 267 267 ARG ARG A . n A 1 233 GLY 233 268 268 GLY GLY A . n A 1 234 VAL 234 269 269 VAL VAL A . n A 1 235 PRO 235 270 270 PRO PRO A . n A 1 236 VAL 236 271 271 VAL VAL A . n A 1 237 ALA 237 272 272 ALA ALA A . n A 1 238 GLU 238 273 273 GLU GLU A . n A 1 239 PHE 239 274 274 PHE PHE A . n A 1 240 ASN 240 275 275 ASN ASN A . n A 1 241 THR 241 276 276 THR THR A . n A 1 242 GLU 242 277 277 GLU GLU A . n A 1 243 THR 243 278 278 THR THR A . n A 1 244 THR 244 279 279 THR THR A . n A 1 245 PRO 245 280 280 PRO PRO A . n A 1 246 ALA 246 281 281 ALA ALA A . n A 1 247 THR 247 282 282 THR THR A . n A 1 248 ASN 248 283 283 ASN ASN A . n A 1 249 ARG 249 284 284 ARG ARG A . n A 1 250 PHE 250 285 285 PHE PHE A . n A 1 251 ARG 251 286 286 ARG ARG A . n A 1 252 PHE 252 287 287 PHE PHE A . n A 1 253 HIS 253 288 288 HIS HIS A . n A 1 254 PHE 254 289 289 PHE PHE A . n A 1 255 GLN 255 290 290 GLN GLN A . n A 1 256 GLY 256 291 291 GLY GLY A . n A 1 257 PRO 257 292 292 PRO PRO A . n A 1 258 CYS 258 293 293 CYS CYS A . n A 1 259 GLY 259 294 294 GLY GLY A . n A 1 260 THR 260 295 295 THR THR A . n A 1 261 THR 261 296 296 THR THR A . n A 1 262 LEU 262 297 297 LEU LEU A . n A 1 263 PRO 263 298 298 PRO PRO A . n A 1 264 GLU 264 299 299 GLU GLU A . n A 1 265 ALA 265 300 300 ALA ALA A . n A 1 266 LEU 266 301 301 LEU LEU A . n A 1 267 ALA 267 302 302 ALA ALA A . n B 2 1 THR 1 118 118 THR THR B . n B 2 2 ILE 2 119 119 ILE ILE B . n B 2 3 MET 3 120 120 MET MET B . n B 2 4 PRO 4 121 121 PRO PRO B . n B 2 5 SLL 5 122 122 SLL SLL B . n B 2 6 ASP 6 123 123 ASP ASP B . n B 2 7 ILE 7 124 124 ILE ILE B . n B 2 8 GLN 8 125 125 GLN GLN B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 ZN 1 401 1 ZN ZN A . D 4 GOL 1 402 1 GOL GOL A . E 4 GOL 1 403 2 GOL GOL A . F 5 HOH 1 501 60 HOH HOH A . F 5 HOH 2 502 64 HOH HOH A . F 5 HOH 3 503 68 HOH HOH A . F 5 HOH 4 504 61 HOH HOH A . F 5 HOH 5 505 55 HOH HOH A . F 5 HOH 6 506 53 HOH HOH A . F 5 HOH 7 507 35 HOH HOH A . F 5 HOH 8 508 16 HOH HOH A . F 5 HOH 9 509 109 HOH HOH A . F 5 HOH 10 510 1 HOH HOH A . F 5 HOH 11 511 82 HOH HOH A . F 5 HOH 12 512 7 HOH HOH A . F 5 HOH 13 513 58 HOH HOH A . F 5 HOH 14 514 72 HOH HOH A . F 5 HOH 15 515 107 HOH HOH A . F 5 HOH 16 516 18 HOH HOH A . F 5 HOH 17 517 24 HOH HOH A . F 5 HOH 18 518 76 HOH HOH A . F 5 HOH 19 519 52 HOH HOH A . F 5 HOH 20 520 32 HOH HOH A . F 5 HOH 21 521 3 HOH HOH A . F 5 HOH 22 522 43 HOH HOH A . F 5 HOH 23 523 86 HOH HOH A . F 5 HOH 24 524 110 HOH HOH A . F 5 HOH 25 525 27 HOH HOH A . F 5 HOH 26 526 34 HOH HOH A . F 5 HOH 27 527 65 HOH HOH A . F 5 HOH 28 528 83 HOH HOH A . F 5 HOH 29 529 25 HOH HOH A . F 5 HOH 30 530 91 HOH HOH A . F 5 HOH 31 531 9 HOH HOH A . F 5 HOH 32 532 79 HOH HOH A . F 5 HOH 33 533 56 HOH HOH A . F 5 HOH 34 534 13 HOH HOH A . F 5 HOH 35 535 44 HOH HOH A . F 5 HOH 36 536 89 HOH HOH A . F 5 HOH 37 537 50 HOH HOH A . F 5 HOH 38 538 93 HOH HOH A . F 5 HOH 39 539 118 HOH HOH A . F 5 HOH 40 540 104 HOH HOH A . F 5 HOH 41 541 41 HOH HOH A . F 5 HOH 42 542 40 HOH HOH A . F 5 HOH 43 543 5 HOH HOH A . F 5 HOH 44 544 39 HOH HOH A . F 5 HOH 45 545 62 HOH HOH A . F 5 HOH 46 546 80 HOH HOH A . F 5 HOH 47 547 38 HOH HOH A . F 5 HOH 48 548 90 HOH HOH A . F 5 HOH 49 549 2 HOH HOH A . F 5 HOH 50 550 28 HOH HOH A . F 5 HOH 51 551 59 HOH HOH A . F 5 HOH 52 552 42 HOH HOH A . F 5 HOH 53 553 96 HOH HOH A . F 5 HOH 54 554 15 HOH HOH A . F 5 HOH 55 555 21 HOH HOH A . F 5 HOH 56 556 112 HOH HOH A . F 5 HOH 57 557 8 HOH HOH A . F 5 HOH 58 558 47 HOH HOH A . F 5 HOH 59 559 4 HOH HOH A . F 5 HOH 60 560 108 HOH HOH A . F 5 HOH 61 561 106 HOH HOH A . F 5 HOH 62 562 31 HOH HOH A . F 5 HOH 63 563 14 HOH HOH A . F 5 HOH 64 564 29 HOH HOH A . F 5 HOH 65 565 113 HOH HOH A . F 5 HOH 66 566 121 HOH HOH A . F 5 HOH 67 567 75 HOH HOH A . F 5 HOH 68 568 124 HOH HOH A . F 5 HOH 69 569 66 HOH HOH A . F 5 HOH 70 570 30 HOH HOH A . F 5 HOH 71 571 84 HOH HOH A . F 5 HOH 72 572 37 HOH HOH A . F 5 HOH 73 573 36 HOH HOH A . F 5 HOH 74 574 67 HOH HOH A . F 5 HOH 75 575 70 HOH HOH A . F 5 HOH 76 576 73 HOH HOH A . F 5 HOH 77 577 57 HOH HOH A . F 5 HOH 78 578 111 HOH HOH A . F 5 HOH 79 579 6 HOH HOH A . F 5 HOH 80 580 63 HOH HOH A . F 5 HOH 81 581 123 HOH HOH A . F 5 HOH 82 582 49 HOH HOH A . F 5 HOH 83 583 117 HOH HOH A . F 5 HOH 84 584 10 HOH HOH A . F 5 HOH 85 585 115 HOH HOH A . F 5 HOH 86 586 33 HOH HOH A . F 5 HOH 87 587 71 HOH HOH A . F 5 HOH 88 588 74 HOH HOH A . F 5 HOH 89 589 92 HOH HOH A . F 5 HOH 90 590 45 HOH HOH A . F 5 HOH 91 591 17 HOH HOH A . F 5 HOH 92 592 114 HOH HOH A . F 5 HOH 93 593 94 HOH HOH A . F 5 HOH 94 594 120 HOH HOH A . F 5 HOH 95 595 102 HOH HOH A . F 5 HOH 96 596 54 HOH HOH A . F 5 HOH 97 597 51 HOH HOH A . F 5 HOH 98 598 23 HOH HOH A . F 5 HOH 99 599 105 HOH HOH A . F 5 HOH 100 600 85 HOH HOH A . F 5 HOH 101 601 69 HOH HOH A . F 5 HOH 102 602 81 HOH HOH A . F 5 HOH 103 603 97 HOH HOH A . F 5 HOH 104 604 26 HOH HOH A . F 5 HOH 105 605 46 HOH HOH A . F 5 HOH 106 606 48 HOH HOH A . F 5 HOH 107 607 95 HOH HOH A . F 5 HOH 108 608 101 HOH HOH A . F 5 HOH 109 609 103 HOH HOH A . F 5 HOH 110 610 78 HOH HOH A . F 5 HOH 111 611 116 HOH HOH A . F 5 HOH 112 612 122 HOH HOH A . F 5 HOH 113 613 119 HOH HOH A . F 5 HOH 114 614 12 HOH HOH A . G 5 HOH 1 201 77 HOH HOH B . G 5 HOH 2 202 11 HOH HOH B . G 5 HOH 3 203 88 HOH HOH B . G 5 HOH 4 204 87 HOH HOH B . G 5 HOH 5 205 99 HOH HOH B . G 5 HOH 6 206 100 HOH HOH B . G 5 HOH 7 207 98 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1740 ? 1 MORE -11 ? 1 'SSA (A^2)' 12520 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 131 ? A CYS 166 ? 1_555 ZN ? C ZN . ? A ZN 401 ? 1_555 SG ? A CYS 134 ? A CYS 169 ? 1_555 106.7 ? 2 SG ? A CYS 131 ? A CYS 166 ? 1_555 ZN ? C ZN . ? A ZN 401 ? 1_555 SG ? A CYS 172 ? A CYS 207 ? 1_555 107.1 ? 3 SG ? A CYS 134 ? A CYS 169 ? 1_555 ZN ? C ZN . ? A ZN 401 ? 1_555 SG ? A CYS 172 ? A CYS 207 ? 1_555 114.9 ? 4 SG ? A CYS 131 ? A CYS 166 ? 1_555 ZN ? C ZN . ? A ZN 401 ? 1_555 SG ? A CYS 177 ? A CYS 212 ? 1_555 100.0 ? 5 SG ? A CYS 134 ? A CYS 169 ? 1_555 ZN ? C ZN . ? A ZN 401 ? 1_555 SG ? A CYS 177 ? A CYS 212 ? 1_555 114.5 ? 6 SG ? A CYS 172 ? A CYS 207 ? 1_555 ZN ? C ZN . ? A ZN 401 ? 1_555 SG ? A CYS 177 ? A CYS 212 ? 1_555 112.0 ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2019-07-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0103 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A PRO 270 ? ? O A HOH 501 ? ? 1.81 2 1 O A HOH 525 ? ? O A HOH 527 ? ? 2.00 3 1 O A ARG 44 ? ? O A HOH 502 ? ? 2.15 4 1 O A HOH 587 ? ? O A HOH 598 ? ? 2.16 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 614 ? ? 1_555 O A HOH 614 ? ? 2_556 1.53 2 1 O A HOH 584 ? ? 1_555 O B HOH 202 ? ? 2_556 1.70 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASP _pdbx_validate_rmsd_angle.auth_seq_id_1 228 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CG _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ASP _pdbx_validate_rmsd_angle.auth_seq_id_2 228 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OD1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ASP _pdbx_validate_rmsd_angle.auth_seq_id_3 228 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 125.78 _pdbx_validate_rmsd_angle.angle_target_value 118.30 _pdbx_validate_rmsd_angle.angle_deviation 7.48 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 70 ? ? -102.94 62.79 2 1 ARG A 78 ? ? 46.95 -125.57 3 1 ASN A 94 ? ? -150.11 67.60 4 1 SER A 252 ? ? 30.97 52.67 # _pdbx_validate_main_chain_plane.id 1 _pdbx_validate_main_chain_plane.PDB_model_num 1 _pdbx_validate_main_chain_plane.auth_comp_id SLL _pdbx_validate_main_chain_plane.auth_asym_id B _pdbx_validate_main_chain_plane.auth_seq_id 122 _pdbx_validate_main_chain_plane.PDB_ins_code ? _pdbx_validate_main_chain_plane.label_alt_id ? _pdbx_validate_main_chain_plane.improper_torsion_angle 16.86 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 614 ? 6.88 . 2 1 O ? B HOH 207 ? 6.32 . # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal ? China 2017YFA0503600 1 ? China 2016YFA0400903 2 ? China XDB19000000 3 ? China 31621002 4 ? China U1532109 5 ? China 31700671 6 ? China 2017FXCX004 7 ? China 1608085QC52 8 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ZINC ION' ZN 4 GLYCEROL GOL 5 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #