HEADER IMMUNOSUPPRESSANT 05-AUG-18 6AEL TITLE CRYSTAL STRUCTURE OF ENPP1 IN COMPLEX WITH 3'3'-CGAMP COMPND MOL_ID: 1; COMPND 2 MOLECULE: ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE 1, ISOFORM COMPND 3 CRA_D; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE FAMILY COMPND 6 MEMBER 1; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: ENPP1, MCG_9001; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS ENZYME, PHOSHODIESTERASE, CGAMP, CGAS-STING, CYCLIC GMP-AMP, KEYWDS 2 IMMUNOSUPPRESSANT EXPDTA X-RAY DIFFRACTION AUTHOR K.KATO,H.NISHIMASU,S.HIRANO,H.HIRANO,R.ISHITANI,O.NUREKI REVDAT 3 22-NOV-23 6AEL 1 HETSYN REVDAT 2 29-JUL-20 6AEL 1 COMPND REMARK HETNAM HETSYN REVDAT 2 2 1 LINK SITE ATOM REVDAT 1 06-MAR-19 6AEL 0 JRNL AUTH K.KATO,H.NISHIMASU,D.OIKAWA,S.HIRANO,H.HIRANO,G.KASUYA, JRNL AUTH 2 R.ISHITANI,F.TOKUNAGA,O.NUREKI JRNL TITL STRUCTURAL INSIGHTS INTO CGAMP DEGRADATION BY JRNL TITL 2 ECTO-NUCLEOTIDE PYROPHOSPHATASE PHOSPHODIESTERASE 1. JRNL REF NAT COMMUN V. 9 4424 2018 JRNL REFN ESSN 2041-1723 JRNL PMID 30356045 JRNL DOI 10.1038/S41467-018-06922-7 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.13_2998: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 57214 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 2894 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.0459 - 5.2397 1.00 2654 143 0.1605 0.1866 REMARK 3 2 5.2397 - 4.1597 1.00 2601 143 0.1384 0.1699 REMARK 3 3 4.1597 - 3.6341 1.00 2593 152 0.1421 0.1740 REMARK 3 4 3.6341 - 3.3020 1.00 2601 138 0.1559 0.1748 REMARK 3 5 3.3020 - 3.0653 1.00 2600 145 0.1602 0.1985 REMARK 3 6 3.0653 - 2.8846 1.00 2585 136 0.1654 0.2109 REMARK 3 7 2.8846 - 2.7402 1.00 2589 132 0.1686 0.2223 REMARK 3 8 2.7402 - 2.6209 1.00 2590 143 0.1656 0.2065 REMARK 3 9 2.6209 - 2.5200 1.00 2564 137 0.1658 0.2001 REMARK 3 10 2.5200 - 2.4331 1.00 2599 135 0.1672 0.1932 REMARK 3 11 2.4331 - 2.3570 1.00 2578 135 0.1693 0.2110 REMARK 3 12 2.3570 - 2.2896 1.00 2582 144 0.1748 0.2201 REMARK 3 13 2.2896 - 2.2293 1.00 2577 134 0.1802 0.2352 REMARK 3 14 2.2293 - 2.1750 1.00 2594 110 0.1748 0.2065 REMARK 3 15 2.1750 - 2.1255 1.00 2547 143 0.1875 0.2414 REMARK 3 16 2.1255 - 2.0803 1.00 2641 129 0.1981 0.2227 REMARK 3 17 2.0803 - 2.0387 1.00 2525 150 0.1991 0.2312 REMARK 3 18 2.0387 - 2.0002 1.00 2580 137 0.2107 0.2449 REMARK 3 19 2.0002 - 1.9645 1.00 2565 141 0.2236 0.2732 REMARK 3 20 1.9645 - 1.9312 1.00 2606 135 0.2399 0.3289 REMARK 3 21 1.9312 - 1.9000 1.00 2549 132 0.2578 0.3183 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.250 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 6200 REMARK 3 ANGLE : 0.871 8458 REMARK 3 CHIRALITY : 0.053 921 REMARK 3 PLANARITY : 0.005 1073 REMARK 3 DIHEDRAL : 13.994 3682 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 734 THROUGH 903 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.4282 4.3622 -5.8461 REMARK 3 T TENSOR REMARK 3 T11: 0.2604 T22: 0.1749 REMARK 3 T33: 0.1435 T12: -0.0536 REMARK 3 T13: 0.0654 T23: -0.0198 REMARK 3 L TENSOR REMARK 3 L11: 0.9660 L22: 2.7042 REMARK 3 L33: 1.7080 L12: 0.1761 REMARK 3 L13: 0.1653 L23: -0.1127 REMARK 3 S TENSOR REMARK 3 S11: -0.0671 S12: 0.1066 S13: 0.0949 REMARK 3 S21: -0.5203 S22: 0.1412 S23: -0.2521 REMARK 3 S31: -0.1640 S32: 0.1033 S33: -0.0593 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 170 THROUGH 415 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.7994 -6.7721 27.4805 REMARK 3 T TENSOR REMARK 3 T11: 0.3936 T22: 0.2803 REMARK 3 T33: 0.2722 T12: 0.1154 REMARK 3 T13: -0.1675 T23: -0.0265 REMARK 3 L TENSOR REMARK 3 L11: 1.5975 L22: 2.6063 REMARK 3 L33: 1.2569 L12: -0.3578 REMARK 3 L13: -0.2265 L23: 0.5475 REMARK 3 S TENSOR REMARK 3 S11: -0.1592 S12: -0.3262 S13: -0.0786 REMARK 3 S21: 0.7167 S22: 0.2935 S23: -0.5968 REMARK 3 S31: 0.2935 S32: 0.1952 S33: -0.0705 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 416 THROUGH 576 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.1595 8.5634 16.2439 REMARK 3 T TENSOR REMARK 3 T11: 0.1515 T22: 0.1764 REMARK 3 T33: 0.1251 T12: 0.0153 REMARK 3 T13: -0.0126 T23: -0.0264 REMARK 3 L TENSOR REMARK 3 L11: 0.7556 L22: 3.4017 REMARK 3 L33: 0.9045 L12: -0.4502 REMARK 3 L13: 0.0667 L23: 0.2494 REMARK 3 S TENSOR REMARK 3 S11: -0.0974 S12: -0.1187 S13: 0.0968 REMARK 3 S21: 0.2583 S22: 0.1470 S23: -0.2955 REMARK 3 S31: -0.0544 S32: -0.0021 S33: -0.0443 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 577 THROUGH 664 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.4083 -6.9045 -16.0927 REMARK 3 T TENSOR REMARK 3 T11: 0.5208 T22: 0.2941 REMARK 3 T33: 0.1295 T12: -0.1123 REMARK 3 T13: 0.0275 T23: -0.0222 REMARK 3 L TENSOR REMARK 3 L11: 1.4426 L22: 2.1562 REMARK 3 L33: 1.4219 L12: 0.1185 REMARK 3 L13: 0.3248 L23: -0.0417 REMARK 3 S TENSOR REMARK 3 S11: -0.1513 S12: 0.4102 S13: -0.0832 REMARK 3 S21: -0.7728 S22: 0.2739 S23: 0.0596 REMARK 3 S31: -0.1230 S32: -0.0155 S33: 0.0060 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 665 THROUGH 733 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.3861 6.6633 -20.5785 REMARK 3 T TENSOR REMARK 3 T11: 0.6942 T22: 0.2974 REMARK 3 T33: 0.2142 T12: -0.1440 REMARK 3 T13: -0.0385 T23: 0.0234 REMARK 3 L TENSOR REMARK 3 L11: 1.0758 L22: 2.1194 REMARK 3 L33: 2.7393 L12: 0.3549 REMARK 3 L13: 0.0308 L23: -0.7373 REMARK 3 S TENSOR REMARK 3 S11: -0.2998 S12: 0.3277 S13: 0.2095 REMARK 3 S21: -0.9105 S22: 0.3244 S23: 0.1086 REMARK 3 S31: -0.2168 S32: 0.1633 S33: -0.0439 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6AEL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-AUG-18. REMARK 100 THE DEPOSITION ID IS D_1300008628. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAY-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 57243 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 47.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 3.500 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.75100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4GTW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16% PEG3350, 0.1 M BIS-TRIS PROPANE, REMARK 280 PH 8.5, 0.2 M NABR AND 0.1 M MGCL2, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 47.03150 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28570 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 168 REMARK 465 PRO A 169 REMARK 465 LYS A 621 REMARK 465 GLN A 622 REMARK 465 LEU A 623 REMARK 465 ASN A 624 REMARK 465 LEU A 625 REMARK 465 THR A 626 REMARK 465 THR A 627 REMARK 465 GLU A 628 REMARK 465 ASP A 629 REMARK 465 GLU A 904 REMARK 465 ASP A 905 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 170 CG CD CE NZ REMARK 470 GLU A 178 CG CD OE1 OE2 REMARK 470 GLU A 188 CG CD OE1 OE2 REMARK 470 GLU A 190 CG CD OE1 OE2 REMARK 470 LYS A 377 CG CD CE NZ REMARK 470 LYS A 510 CG CD CE NZ REMARK 470 GLN A 595 CG CD OE1 NE2 REMARK 470 LYS A 599 CG CD CE NZ REMARK 470 LYS A 617 CG CD CE NZ REMARK 470 GLU A 620 CG CD OE1 OE2 REMARK 470 ASN A 680 CG OD1 ND2 REMARK 470 ARG A 685 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 710 CG CD CE NZ REMARK 470 GLN A 747 CG CD OE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1423 O HOH A 1429 2.05 REMARK 500 O HOH A 1385 O HOH A 1419 2.09 REMARK 500 O HOH A 1431 O HOH A 1439 2.15 REMARK 500 O HOH A 1114 O HOH A 1138 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 180 78.67 -110.71 REMARK 500 PHE A 303 135.31 75.25 REMARK 500 TRP A 304 130.76 178.84 REMARK 500 ALA A 484 -28.12 -154.77 REMARK 500 GLN A 499 -7.21 77.95 REMARK 500 GLU A 508 51.76 -104.92 REMARK 500 LYS A 510 -169.66 -79.75 REMARK 500 ASP A 520 124.32 -30.12 REMARK 500 ILE A 598 94.14 -66.02 REMARK 500 LYS A 599 44.86 -151.30 REMARK 500 PHE A 688 37.53 -146.91 REMARK 500 SER A 711 17.97 59.16 REMARK 500 ASN A 712 99.22 -66.07 REMARK 500 SER A 716 -160.84 -121.58 REMARK 500 GLU A 827 37.91 -145.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1009 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 200 OD1 REMARK 620 2 ASP A 405 OD2 101.5 REMARK 620 3 HIS A 406 NE2 124.0 91.2 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1008 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 358 OD1 REMARK 620 2 ASP A 358 OD2 57.2 REMARK 620 3 HIS A 362 NE2 97.3 97.5 REMARK 620 4 HIS A 517 NE2 94.8 150.8 93.8 REMARK 620 5 4BW A1007 OAE 140.6 99.0 118.1 99.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1010 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 780 OD1 REMARK 620 2 ASP A 782 OD1 84.9 REMARK 620 3 ASP A 784 OD1 82.0 87.1 REMARK 620 4 ARG A 786 O 91.3 170.6 83.9 REMARK 620 5 ASP A 788 OD1 102.8 89.1 173.5 100.2 REMARK 620 6 HOH A1316 O 164.3 88.2 83.6 93.4 91.1 REMARK 620 N 1 2 3 4 5 REMARK 999 REMARK 999 SEQUENCE REMARK 999 PROTEASE RECOGNITION SITE DBREF 6AEL A 170 905 UNP G3X9S2 G3X9S2_MOUSE 170 905 SEQADV 6AEL GLY A 168 UNP G3X9S2 SEE SEQUENCE DETAILS SEQADV 6AEL PRO A 169 UNP G3X9S2 SEE SEQUENCE DETAILS SEQADV 6AEL ALA A 238 UNP G3X9S2 THR 238 ENGINEERED MUTATION SEQRES 1 A 738 GLY PRO LYS SER TRP VAL GLU GLU THR CYS GLU SER ILE SEQRES 2 A 738 ASP THR PRO GLU CYS PRO ALA GLU PHE GLU SER PRO PRO SEQRES 3 A 738 THR LEU LEU PHE SER LEU ASP GLY PHE ARG ALA GLU TYR SEQRES 4 A 738 LEU HIS THR TRP GLY GLY LEU LEU PRO VAL ILE SER LYS SEQRES 5 A 738 LEU LYS ASN CYS GLY THR TYR THR LYS ASN MET ARG PRO SEQRES 6 A 738 MET TYR PRO THR LYS ALA PHE PRO ASN HIS TYR SER ILE SEQRES 7 A 738 VAL THR GLY LEU TYR PRO GLU SER HIS GLY ILE ILE ASP SEQRES 8 A 738 ASN LYS MET TYR ASP PRO LYS MET ASN ALA SER PHE SER SEQRES 9 A 738 LEU LYS SER LYS GLU LYS PHE ASN PRO LEU TRP TYR LYS SEQRES 10 A 738 GLY GLN PRO ILE TRP VAL THR ALA ASN HIS GLN GLU VAL SEQRES 11 A 738 LYS SER GLY THR TYR PHE TRP PRO GLY SER ASP VAL GLU SEQRES 12 A 738 ILE ASP GLY ILE LEU PRO ASP ILE TYR LYS VAL TYR ASN SEQRES 13 A 738 GLY SER VAL PRO PHE GLU GLU ARG ILE LEU ALA VAL LEU SEQRES 14 A 738 GLU TRP LEU GLN LEU PRO SER HIS GLU ARG PRO HIS PHE SEQRES 15 A 738 TYR THR LEU TYR LEU GLU GLU PRO ASP SER SER GLY HIS SEQRES 16 A 738 SER HIS GLY PRO VAL SER SER GLU VAL ILE LYS ALA LEU SEQRES 17 A 738 GLN LYS VAL ASP ARG LEU VAL GLY MET LEU MET ASP GLY SEQRES 18 A 738 LEU LYS ASP LEU GLY LEU ASP LYS CYS LEU ASN LEU ILE SEQRES 19 A 738 LEU ILE SER ASP HIS GLY MET GLU GLN GLY SER CYS LYS SEQRES 20 A 738 LYS TYR VAL TYR LEU ASN LYS TYR LEU GLY ASP VAL ASN SEQRES 21 A 738 ASN VAL LYS VAL VAL TYR GLY PRO ALA ALA ARG LEU ARG SEQRES 22 A 738 PRO THR ASP VAL PRO GLU THR TYR TYR SER PHE ASN TYR SEQRES 23 A 738 GLU ALA LEU ALA LYS ASN LEU SER CYS ARG GLU PRO ASN SEQRES 24 A 738 GLN HIS PHE ARG PRO TYR LEU LYS PRO PHE LEU PRO LYS SEQRES 25 A 738 ARG LEU HIS PHE ALA LYS SER ASP ARG ILE GLU PRO LEU SEQRES 26 A 738 THR PHE TYR LEU ASP PRO GLN TRP GLN LEU ALA LEU ASN SEQRES 27 A 738 PRO SER GLU ARG LYS TYR CYS GLY SER GLY PHE HIS GLY SEQRES 28 A 738 SER ASP ASN LEU PHE SER ASN MET GLN ALA LEU PHE ILE SEQRES 29 A 738 GLY TYR GLY PRO ALA PHE LYS HIS GLY ALA GLU VAL ASP SEQRES 30 A 738 SER PHE GLU ASN ILE GLU VAL TYR ASN LEU MET CYS ASP SEQRES 31 A 738 LEU LEU GLY LEU ILE PRO ALA PRO ASN ASN GLY SER HIS SEQRES 32 A 738 GLY SER LEU ASN HIS LEU LEU LYS LYS PRO ILE TYR ASN SEQRES 33 A 738 PRO SER HIS PRO LYS GLU GLU GLY PHE LEU SER GLN CYS SEQRES 34 A 738 PRO ILE LYS SER THR SER ASN ASP LEU GLY CYS THR CYS SEQRES 35 A 738 ASP PRO TRP ILE VAL PRO ILE LYS ASP PHE GLU LYS GLN SEQRES 36 A 738 LEU ASN LEU THR THR GLU ASP ASP ASP ILE TYR HIS MET SEQRES 37 A 738 THR VAL PRO TYR GLY ARG PRO ARG ILE LEU LEU LYS GLN SEQRES 38 A 738 HIS ARG VAL CYS LEU LEU GLN GLN GLN GLN PHE LEU THR SEQRES 39 A 738 GLY TYR SER LEU ASP LEU LEU MET PRO LEU TRP ALA SER SEQRES 40 A 738 TYR THR PHE LEU SER ASN ASP GLN PHE SER ARG ASP ASP SEQRES 41 A 738 PHE SER ASN CYS LEU TYR GLN ASP LEU ARG ILE PRO LEU SEQRES 42 A 738 SER PRO VAL HIS LYS CYS SER TYR TYR LYS SER ASN SER SEQRES 43 A 738 LYS LEU SER TYR GLY PHE LEU THR PRO PRO ARG LEU ASN SEQRES 44 A 738 ARG VAL SER ASN HIS ILE TYR SER GLU ALA LEU LEU THR SEQRES 45 A 738 SER ASN ILE VAL PRO MET TYR GLN SER PHE GLN VAL ILE SEQRES 46 A 738 TRP HIS TYR LEU HIS ASP THR LEU LEU GLN ARG TYR ALA SEQRES 47 A 738 HIS GLU ARG ASN GLY ILE ASN VAL VAL SER GLY PRO VAL SEQRES 48 A 738 PHE ASP PHE ASP TYR ASP GLY ARG TYR ASP SER LEU GLU SEQRES 49 A 738 ILE LEU LYS GLN ASN SER ARG VAL ILE ARG SER GLN GLU SEQRES 50 A 738 ILE LEU ILE PRO THR HIS PHE PHE ILE VAL LEU THR SER SEQRES 51 A 738 CYS LYS GLN LEU SER GLU THR PRO LEU GLU CYS SER ALA SEQRES 52 A 738 LEU GLU SER SER ALA TYR ILE LEU PRO HIS ARG PRO ASP SEQRES 53 A 738 ASN ILE GLU SER CYS THR HIS GLY LYS ARG GLU SER SER SEQRES 54 A 738 TRP VAL GLU GLU LEU LEU THR LEU HIS ARG ALA ARG VAL SEQRES 55 A 738 THR ASP VAL GLU LEU ILE THR GLY LEU SER PHE TYR GLN SEQRES 56 A 738 ASP ARG GLN GLU SER VAL SER GLU LEU LEU ARG LEU LYS SEQRES 57 A 738 THR HIS LEU PRO ILE PHE SER GLN GLU ASP HET NAG B 1 14 HET NAG B 2 14 HET MAN B 3 11 HET NAG A1001 14 HET NAG A1002 14 HET NAG A1003 14 HET 4BW A1007 45 HET ZN A1008 1 HET ZN A1009 1 HET CA A1010 1 HET CL A1011 1 HET CL A1012 1 HET CL A1013 1 HET CL A1014 1 HET CL A1015 1 HET CL A1016 1 HET EDO A1017 4 HET EDO A1018 4 HET EDO A1019 4 HET EDO A1020 4 HET EDO A1021 4 HET EDO A1022 4 HET EDO A1023 4 HET EDO A1024 4 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM 4BW 2-AMINO-9-[(2R,3R,3AS,5R,7AR,9R,10R,10AS,12R,14AR)-9- HETNAM 2 4BW (6-AMINO-9H-PURIN-9-YL)-3,5,10,12-TETRAHYDROXY-5,12- HETNAM 3 4BW DIOXIDOOCTAHYDRO-2H,7H-DIFURO[3,2-D:3',2'-J][1,3,7,9, HETNAM 4 4BW 2,8]TETRAOXADIPHOSPHACYCLODODECIN-2-YL]-1,9-DIHYDRO- HETNAM 5 4BW 6H-PURIN-6-ONE HETNAM ZN ZINC ION HETNAM CA CALCIUM ION HETNAM CL CHLORIDE ION HETNAM EDO 1,2-ETHANEDIOL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN 4BW 3',3' CGAMP; C-GMP-AMP; C[G(3',5')PA(3',5')P] HETSYN EDO ETHYLENE GLYCOL FORMUL 2 NAG 5(C8 H15 N O6) FORMUL 2 MAN C6 H12 O6 FORMUL 6 4BW C20 H24 N10 O13 P2 FORMUL 7 ZN 2(ZN 2+) FORMUL 9 CA CA 2+ FORMUL 10 CL 6(CL 1-) FORMUL 16 EDO 8(C2 H6 O2) FORMUL 24 HOH *356(H2 O) HELIX 1 AA1 ARG A 203 GLY A 211 1 9 HELIX 2 AA2 LEU A 214 GLY A 224 1 11 HELIX 3 AA3 LYS A 237 GLY A 248 1 12 HELIX 4 AA4 TYR A 250 GLY A 255 1 6 HELIX 5 AA5 SER A 274 TYR A 283 5 10 HELIX 6 AA6 PRO A 287 GLN A 295 1 9 HELIX 7 AA7 PRO A 327 LEU A 339 1 13 HELIX 8 AA8 PRO A 357 GLY A 365 1 9 HELIX 9 AA9 SER A 368 LEU A 392 1 25 HELIX 10 AB1 LEU A 419 GLY A 424 1 6 HELIX 11 AB2 ASN A 452 LEU A 460 1 9 HELIX 12 AB3 PRO A 475 LEU A 477 5 3 HELIX 13 AB4 PRO A 478 HIS A 482 5 5 HELIX 14 AB5 PHE A 523 GLN A 527 5 5 HELIX 15 AB6 GLU A 550 GLY A 560 1 11 HELIX 16 AB7 LEU A 573 LEU A 577 5 5 HELIX 17 AB8 ASP A 631 VAL A 637 1 7 HELIX 18 AB9 SER A 701 HIS A 704 5 4 HELIX 19 AC1 LYS A 705 LYS A 710 1 6 HELIX 20 AC2 TYR A 733 SER A 740 5 8 HELIX 21 AC3 TYR A 746 THR A 759 1 14 HELIX 22 AC4 THR A 759 ASN A 769 1 11 HELIX 23 AC5 SER A 789 SER A 797 1 9 HELIX 24 AC6 ASN A 844 CYS A 848 5 5 HELIX 25 AC7 SER A 856 HIS A 865 1 10 HELIX 26 AC8 ARG A 868 GLY A 877 1 10 HELIX 27 AC9 SER A 887 HIS A 897 1 11 SHEET 1 AA1 8 ILE A 318 TYR A 319 0 SHEET 2 AA1 8 SER A 299 TYR A 302 1 N THR A 301 O ILE A 318 SHEET 3 AA1 8 PHE A 349 LEU A 354 1 O PHE A 349 N GLY A 300 SHEET 4 AA1 8 THR A 194 LEU A 199 1 N LEU A 196 O TYR A 350 SHEET 5 AA1 8 ASN A 399 ILE A 403 1 O ILE A 401 N PHE A 197 SHEET 6 AA1 8 PHE A 530 TYR A 533 -1 O TYR A 533 N LEU A 400 SHEET 7 AA1 8 THR A 225 THR A 227 -1 N THR A 225 O GLY A 532 SHEET 8 AA1 8 ALA A 541 VAL A 543 1 O VAL A 543 N TYR A 226 SHEET 1 AA2 2 MET A 230 ARG A 231 0 SHEET 2 AA2 2 PHE A 546 GLU A 547 1 O PHE A 546 N ARG A 231 SHEET 1 AA3 2 MET A 261 ASP A 263 0 SHEET 2 AA3 2 ALA A 268 PHE A 270 -1 O PHE A 270 N MET A 261 SHEET 1 AA4 2 GLU A 409 GLN A 410 0 SHEET 2 AA4 2 GLY A 515 PHE A 516 -1 O PHE A 516 N GLU A 409 SHEET 1 AA5 2 TYR A 416 TYR A 418 0 SHEET 2 AA5 2 GLN A 501 ALA A 503 1 O GLN A 501 N VAL A 417 SHEET 1 AA6 4 VAL A 429 VAL A 432 0 SHEET 2 AA6 4 ARG A 438 PRO A 441 -1 O ARG A 440 N LYS A 430 SHEET 3 AA6 4 LEU A 492 LEU A 496 -1 O LEU A 492 N LEU A 439 SHEET 4 AA6 4 PHE A 469 LEU A 473 -1 N TYR A 472 O THR A 493 SHEET 1 AA7 8 PHE A 592 SER A 594 0 SHEET 2 AA7 8 ARG A 650 GLN A 655 1 O VAL A 651 N PHE A 592 SHEET 3 AA7 8 LEU A 660 SER A 664 -1 O TYR A 663 N CYS A 652 SHEET 4 AA7 8 MET A 669 PHE A 677 -1 O LEU A 671 N GLY A 662 SHEET 5 AA7 8 ILE A 771 VAL A 778 -1 O ILE A 771 N PHE A 677 SHEET 6 AA7 8 HIS A 810 CYS A 818 -1 O THR A 816 N ASN A 772 SHEET 7 AA7 8 LEU A 831 PRO A 839 -1 O SER A 834 N LEU A 815 SHEET 8 AA7 8 ARG A 866 ALA A 867 -1 O ALA A 867 N ALA A 835 SHEET 1 AA8 2 ARG A 643 ILE A 644 0 SHEET 2 AA8 2 LEU A 878 SER A 879 -1 O SER A 879 N ARG A 643 SHEET 1 AA9 2 SER A 716 PHE A 719 0 SHEET 2 AA9 2 ILE A 742 MET A 745 -1 O MET A 745 N SER A 716 SHEET 1 AB1 2 ARG A 798 ILE A 800 0 SHEET 2 AB1 2 GLN A 803 ILE A 805 -1 O ILE A 805 N ARG A 798 SSBOND 1 CYS A 177 CYS A 223 1555 1555 2.04 SSBOND 2 CYS A 185 CYS A 397 1555 1555 2.03 SSBOND 3 CYS A 413 CYS A 512 1555 1555 2.04 SSBOND 4 CYS A 462 CYS A 848 1555 1555 2.03 SSBOND 5 CYS A 596 CYS A 652 1555 1555 2.05 SSBOND 6 CYS A 607 CYS A 706 1555 1555 2.03 SSBOND 7 CYS A 609 CYS A 691 1555 1555 2.04 SSBOND 8 CYS A 818 CYS A 828 1555 1555 2.04 LINK ND2 ASN A 267 C1 NAG A1001 1555 1555 1.44 LINK ND2 ASN A 323 C1 NAG A1002 1555 1555 1.44 LINK ND2 ASN A 459 C1 NAG A1003 1555 1555 1.44 LINK ND2 ASN A 567 C1 NAG B 1 1555 1555 1.42 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.45 LINK O4 NAG B 2 C1 MAN B 3 1555 1555 1.46 LINK OD1 ASP A 200 ZN ZN A1009 1555 1555 1.91 LINK OD1 ASP A 358 ZN ZN A1008 1555 1555 2.18 LINK OD2 ASP A 358 ZN ZN A1008 1555 1555 2.38 LINK NE2 HIS A 362 ZN ZN A1008 1555 1555 2.04 LINK OD2 ASP A 405 ZN ZN A1009 1555 1555 2.21 LINK NE2 HIS A 406 ZN ZN A1009 1555 1555 2.20 LINK NE2 HIS A 517 ZN ZN A1008 1555 1555 2.09 LINK OD1 ASP A 780 CA CA A1010 1555 1555 2.25 LINK OD1 ASP A 782 CA CA A1010 1555 1555 2.22 LINK OD1 ASP A 784 CA CA A1010 1555 1555 2.30 LINK O ARG A 786 CA CA A1010 1555 1555 2.27 LINK OD1 ASP A 788 CA CA A1010 1555 1555 2.22 LINK OAE 4BW A1007 ZN ZN A1008 1555 1555 1.76 LINK CA CA A1010 O HOH A1316 1555 1555 2.46 CISPEP 1 TYR A 234 PRO A 235 0 -4.63 CISPEP 2 GLU A 356 PRO A 357 0 5.24 CISPEP 3 VAL A 444 PRO A 445 0 4.38 CRYST1 53.169 94.063 74.274 90.00 95.93 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018808 0.000000 0.001953 0.00000 SCALE2 0.000000 0.010631 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013536 0.00000