data_6AEX # _entry.id 6AEX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 6AEX WWPDB D_1300008637 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6AEX _pdbx_database_status.recvd_initial_deposition_date 2018-08-06 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Min, L.' 1 ? 'Huang, M.' 2 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country NE _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Febs Lett.' _citation.journal_id_ASTM FEBLAL _citation.journal_id_CSD 0165 _citation.journal_id_ISSN 0014-5793 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 593 _citation.language ? _citation.page_first 1236 _citation.page_last 1247 _citation.title ;Crystal structure of the unoccupied murine urokinase-type plasminogen activator receptor (uPAR) reveals a tightly packed DII-DIII unit. ; _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1002/1873-3468.13397 _citation.pdbx_database_id_PubMed 31044429 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Liu, M.' 1 ? primary 'Lin, L.' 2 ? primary 'Hoyer-Hansen, G.' 3 ? primary 'Ploug, M.' 4 0000-0003-2215-4265 primary 'Li, H.' 5 ? primary 'Jiang, L.' 6 0000-0002-4734-3778 primary 'Yuan, C.' 7 0000-0001-6122-0259 primary 'Li, J.' 8 ? primary 'Huang, M.' 9 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6AEX _cell.details ? _cell.formula_units_Z ? _cell.length_a 83.820 _cell.length_a_esd ? _cell.length_b 83.820 _cell.length_b_esd ? _cell.length_c 81.398 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 8 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AEX _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Urokinase plasminogen activator surface receptor' 30170.777 1 ? ? ? ? 2 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 1 ? ? ? ? 3 water nat water 18.015 27 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name uPAR # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;LQCMQCESNQSCLVEECALGQDLCRTTVLREWQDDRELEVVTRGCAHSEKTNRTMSYRMGSMIISLTETVCATNLCNRPR PGARGRAFPQGRYLECASCTSLDQSCERGREQSLQCRYPTEHCIEVVTLQSTERSLKDEDYTRGCGSLPGCPGTAGFHSN QTFHFLKCCNYTHCNGGPVLDLQSFPPNGFQCYSCEGNNTLGCSSEEASLINCRGPMNQCLVATGLDVLGNRSYTVRGCA TASWCQGSHVADSFPTHLNVSVSCCHGSGCNSPTGGA ; _entity_poly.pdbx_seq_one_letter_code_can ;LQCMQCESNQSCLVEECALGQDLCRTTVLREWQDDRELEVVTRGCAHSEKTNRTMSYRMGSMIISLTETVCATNLCNRPR PGARGRAFPQGRYLECASCTSLDQSCERGREQSLQCRYPTEHCIEVVTLQSTERSLKDEDYTRGCGSLPGCPGTAGFHSN QTFHFLKCCNYTHCNGGPVLDLQSFPPNGFQCYSCEGNNTLGCSSEEASLINCRGPMNQCLVATGLDVLGNRSYTVRGCA TASWCQGSHVADSFPTHLNVSVSCCHGSGCNSPTGGA ; _entity_poly.pdbx_strand_id U _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LEU n 1 2 GLN n 1 3 CYS n 1 4 MET n 1 5 GLN n 1 6 CYS n 1 7 GLU n 1 8 SER n 1 9 ASN n 1 10 GLN n 1 11 SER n 1 12 CYS n 1 13 LEU n 1 14 VAL n 1 15 GLU n 1 16 GLU n 1 17 CYS n 1 18 ALA n 1 19 LEU n 1 20 GLY n 1 21 GLN n 1 22 ASP n 1 23 LEU n 1 24 CYS n 1 25 ARG n 1 26 THR n 1 27 THR n 1 28 VAL n 1 29 LEU n 1 30 ARG n 1 31 GLU n 1 32 TRP n 1 33 GLN n 1 34 ASP n 1 35 ASP n 1 36 ARG n 1 37 GLU n 1 38 LEU n 1 39 GLU n 1 40 VAL n 1 41 VAL n 1 42 THR n 1 43 ARG n 1 44 GLY n 1 45 CYS n 1 46 ALA n 1 47 HIS n 1 48 SER n 1 49 GLU n 1 50 LYS n 1 51 THR n 1 52 ASN n 1 53 ARG n 1 54 THR n 1 55 MET n 1 56 SER n 1 57 TYR n 1 58 ARG n 1 59 MET n 1 60 GLY n 1 61 SER n 1 62 MET n 1 63 ILE n 1 64 ILE n 1 65 SER n 1 66 LEU n 1 67 THR n 1 68 GLU n 1 69 THR n 1 70 VAL n 1 71 CYS n 1 72 ALA n 1 73 THR n 1 74 ASN n 1 75 LEU n 1 76 CYS n 1 77 ASN n 1 78 ARG n 1 79 PRO n 1 80 ARG n 1 81 PRO n 1 82 GLY n 1 83 ALA n 1 84 ARG n 1 85 GLY n 1 86 ARG n 1 87 ALA n 1 88 PHE n 1 89 PRO n 1 90 GLN n 1 91 GLY n 1 92 ARG n 1 93 TYR n 1 94 LEU n 1 95 GLU n 1 96 CYS n 1 97 ALA n 1 98 SER n 1 99 CYS n 1 100 THR n 1 101 SER n 1 102 LEU n 1 103 ASP n 1 104 GLN n 1 105 SER n 1 106 CYS n 1 107 GLU n 1 108 ARG n 1 109 GLY n 1 110 ARG n 1 111 GLU n 1 112 GLN n 1 113 SER n 1 114 LEU n 1 115 GLN n 1 116 CYS n 1 117 ARG n 1 118 TYR n 1 119 PRO n 1 120 THR n 1 121 GLU n 1 122 HIS n 1 123 CYS n 1 124 ILE n 1 125 GLU n 1 126 VAL n 1 127 VAL n 1 128 THR n 1 129 LEU n 1 130 GLN n 1 131 SER n 1 132 THR n 1 133 GLU n 1 134 ARG n 1 135 SER n 1 136 LEU n 1 137 LYS n 1 138 ASP n 1 139 GLU n 1 140 ASP n 1 141 TYR n 1 142 THR n 1 143 ARG n 1 144 GLY n 1 145 CYS n 1 146 GLY n 1 147 SER n 1 148 LEU n 1 149 PRO n 1 150 GLY n 1 151 CYS n 1 152 PRO n 1 153 GLY n 1 154 THR n 1 155 ALA n 1 156 GLY n 1 157 PHE n 1 158 HIS n 1 159 SER n 1 160 ASN n 1 161 GLN n 1 162 THR n 1 163 PHE n 1 164 HIS n 1 165 PHE n 1 166 LEU n 1 167 LYS n 1 168 CYS n 1 169 CYS n 1 170 ASN n 1 171 TYR n 1 172 THR n 1 173 HIS n 1 174 CYS n 1 175 ASN n 1 176 GLY n 1 177 GLY n 1 178 PRO n 1 179 VAL n 1 180 LEU n 1 181 ASP n 1 182 LEU n 1 183 GLN n 1 184 SER n 1 185 PHE n 1 186 PRO n 1 187 PRO n 1 188 ASN n 1 189 GLY n 1 190 PHE n 1 191 GLN n 1 192 CYS n 1 193 TYR n 1 194 SER n 1 195 CYS n 1 196 GLU n 1 197 GLY n 1 198 ASN n 1 199 ASN n 1 200 THR n 1 201 LEU n 1 202 GLY n 1 203 CYS n 1 204 SER n 1 205 SER n 1 206 GLU n 1 207 GLU n 1 208 ALA n 1 209 SER n 1 210 LEU n 1 211 ILE n 1 212 ASN n 1 213 CYS n 1 214 ARG n 1 215 GLY n 1 216 PRO n 1 217 MET n 1 218 ASN n 1 219 GLN n 1 220 CYS n 1 221 LEU n 1 222 VAL n 1 223 ALA n 1 224 THR n 1 225 GLY n 1 226 LEU n 1 227 ASP n 1 228 VAL n 1 229 LEU n 1 230 GLY n 1 231 ASN n 1 232 ARG n 1 233 SER n 1 234 TYR n 1 235 THR n 1 236 VAL n 1 237 ARG n 1 238 GLY n 1 239 CYS n 1 240 ALA n 1 241 THR n 1 242 ALA n 1 243 SER n 1 244 TRP n 1 245 CYS n 1 246 GLN n 1 247 GLY n 1 248 SER n 1 249 HIS n 1 250 VAL n 1 251 ALA n 1 252 ASP n 1 253 SER n 1 254 PHE n 1 255 PRO n 1 256 THR n 1 257 HIS n 1 258 LEU n 1 259 ASN n 1 260 VAL n 1 261 SER n 1 262 VAL n 1 263 SER n 1 264 CYS n 1 265 CYS n 1 266 HIS n 1 267 GLY n 1 268 SER n 1 269 GLY n 1 270 CYS n 1 271 ASN n 1 272 SER n 1 273 PRO n 1 274 THR n 1 275 GLY n 1 276 GLY n 1 277 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 277 _entity_src_gen.gene_src_common_name Mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Plaur _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name 'fruit fly' _entity_src_gen.pdbx_host_org_scientific_name 'Drosophila melanogaster' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7227 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code UPAR_MOUSE _struct_ref.pdbx_db_accession P35456 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LQCMQCESNQSCLVEECALGQDLCRTTVLREWQDDRELEVVTRGCAHSEKTNRTMSYRMGSMIISLTETVCATNLCNRPR PGARGRAFPQGRYLECASCTSLDQSCERGREQSLQCRYPTEHCIEVVTLQSTERSLKDEDYTRGCGSLPGCPGTAGFHSN QTFHFLKCCNYTHCNGGPVLDLQSFPPNGFQCYSCEGNNTLGCSSEEASLINCRGPMNQCLVATGLDVLGNRSYTVRGCA TASWCQGSHVADSFPTHLNVSVSCCHGSGCNSPTGGA ; _struct_ref.pdbx_align_begin 24 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6AEX _struct_ref_seq.pdbx_strand_id U _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 277 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P35456 _struct_ref_seq.db_align_beg 24 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 300 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 277 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ? 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6AEX _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.37 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 48.09 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method EVAPORATION _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.4 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '50mM Tris.Cl, 3M NaCl' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2008-07-10 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.04 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'NSLS BEAMLINE X29A' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.04 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline X29A _diffrn_source.pdbx_synchrotron_site NSLS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6AEX _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.393 _reflns.d_resolution_low 37.261 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 11915 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.74 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 10.3 _reflns.pdbx_Rmerge_I_obs 0.094 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 45.50 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.393 _reflns_shell.d_res_low 2.479 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 585 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.786 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6AEX _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.393 _refine.ls_d_res_low 37.261 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 11910 _refine.ls_number_reflns_R_free 636 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.80 _refine.ls_percent_reflns_R_free 5.34 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1976 _refine.ls_R_factor_R_free 0.2445 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1948 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.36 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model 3LAQ _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 27.10 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.30 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1220 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 14 _refine_hist.number_atoms_solvent 27 _refine_hist.number_atoms_total 1261 _refine_hist.d_res_high 2.393 _refine_hist.d_res_low 37.261 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.008 ? 1270 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.011 ? 1728 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 7.525 ? 739 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.053 ? 187 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.005 ? 227 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.3933 2.5781 . . 116 2190 100.00 . . . 0.2906 . 0.2512 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5781 2.8375 . . 102 2239 100.00 . . . 0.2526 . 0.2144 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.8375 3.2478 . . 151 2209 100.00 . . . 0.2820 . 0.2165 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.2478 4.0911 . . 120 2266 100.00 . . . 0.2481 . 0.1865 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.0911 37.2656 . . 147 2370 100.00 . . . 0.2207 . 0.1778 . . . . . . . . . . # _struct.entry_id 6AEX _struct.title 'Crystal structure of unoccupied murine uPAR' _struct.pdbx_descriptor 'Urokinase plasminogen activator surface receptor' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6AEX _struct_keywords.text 'uPAR, TFPDs, CELL INVASION' _struct_keywords.pdbx_keywords 'CELL INVASION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ASP A 181 ? PHE A 185 ? ASP U 181 PHE U 185 5 ? 5 HELX_P HELX_P2 AA2 THR A 241 ? GLY A 247 ? THR U 241 GLY U 247 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 96 SG ? ? ? 1_555 A CYS 123 SG ? ? U CYS 96 U CYS 123 1_555 ? ? ? ? ? ? ? 2.013 ? ? disulf2 disulf ? ? A CYS 99 SG ? ? ? 1_555 A CYS 106 SG ? ? U CYS 99 U CYS 106 1_555 ? ? ? ? ? ? ? 2.054 ? ? disulf3 disulf ? ? A CYS 116 SG ? ? ? 1_555 A CYS 145 SG ? ? U CYS 116 U CYS 145 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf4 disulf ? ? A CYS 151 SG ? ? ? 1_555 A CYS 168 SG ? ? U CYS 151 U CYS 168 1_555 ? ? ? ? ? ? ? 2.056 ? ? disulf5 disulf ? ? A CYS 169 SG ? ? ? 1_555 A CYS 174 SG ? ? U CYS 169 U CYS 174 1_555 ? ? ? ? ? ? ? 2.053 ? ? disulf6 disulf ? ? A CYS 192 SG ? ? ? 1_555 A CYS 220 SG ? ? U CYS 192 U CYS 220 1_555 ? ? ? ? ? ? ? 2.077 ? ? disulf7 disulf ? ? A CYS 195 SG ? ? ? 1_555 A CYS 203 SG ? ? U CYS 195 U CYS 203 1_555 ? ? ? ? ? ? ? 2.044 ? ? disulf8 disulf ? ? A CYS 213 SG ? ? ? 1_555 A CYS 239 SG ? ? U CYS 213 U CYS 239 1_555 ? ? ? ? ? ? ? 2.075 ? ? disulf9 disulf ? ? A CYS 245 SG ? ? ? 1_555 A CYS 264 SG ? ? U CYS 245 U CYS 264 1_555 ? ? ? ? ? ? ? 2.028 ? ? disulf10 disulf ? ? A CYS 265 SG ? ? ? 1_555 A CYS 270 SG ? ? U CYS 265 U CYS 270 1_555 ? ? ? ? ? ? ? 2.055 ? ? covale1 covale one ? A ASN 160 ND2 ? ? ? 1_555 B NAG . C1 ? ? U ASN 160 U NAG 301 1_555 ? ? ? ? ? ? ? 1.590 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 118 A . ? TYR 118 U PRO 119 A ? PRO 119 U 1 8.92 2 CYS 151 A . ? CYS 151 U PRO 152 A ? PRO 152 U 1 -4.64 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 9 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA1 7 8 ? anti-parallel AA1 8 9 ? anti-parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLN A 112 ? CYS A 116 ? GLN U 112 CYS U 116 AA1 2 LEU A 94 ? THR A 100 ? LEU U 94 THR U 100 AA1 3 ASP A 140 ? GLY A 146 ? ASP U 140 GLY U 146 AA1 4 HIS A 122 ? LEU A 129 ? HIS U 122 LEU U 129 AA1 5 PHE A 163 ? CYS A 169 ? PHE U 163 CYS U 169 AA1 6 GLY A 153 ? HIS A 158 ? GLY U 153 HIS U 158 AA1 7 TYR A 234 ? ALA A 240 ? TYR U 234 ALA U 240 AA1 8 GLN A 219 ? LEU A 226 ? GLN U 219 LEU U 226 AA1 9 ASN A 259 ? CYS A 265 ? ASN U 259 CYS U 265 AA2 1 PRO A 187 ? SER A 194 ? PRO U 187 SER U 194 AA2 2 SER A 209 ? ARG A 214 ? SER U 209 ARG U 214 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O LEU A 114 ? O LEU U 114 N CYS A 96 ? N CYS U 96 AA1 2 3 N CYS A 99 ? N CYS U 99 O ARG A 143 ? O ARG U 143 AA1 3 4 O GLY A 146 ? O GLY U 146 N HIS A 122 ? N HIS U 122 AA1 4 5 N VAL A 127 ? N VAL U 127 O PHE A 165 ? O PHE U 165 AA1 5 6 O HIS A 164 ? O HIS U 164 N PHE A 157 ? N PHE U 157 AA1 6 7 N HIS A 158 ? N HIS U 158 O CYS A 239 ? O CYS U 239 AA1 7 8 O GLY A 238 ? O GLY U 238 N LEU A 221 ? N LEU U 221 AA1 8 9 N LEU A 226 ? N LEU U 226 O ASN A 259 ? O ASN U 259 AA2 1 2 N CYS A 192 ? N CYS U 192 O ILE A 211 ? O ILE U 211 # _atom_sites.entry_id 6AEX _atom_sites.fract_transf_matrix[1][1] 0.011930 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011930 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012285 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LEU 1 1 ? ? ? U . n A 1 2 GLN 2 2 ? ? ? U . n A 1 3 CYS 3 3 ? ? ? U . n A 1 4 MET 4 4 ? ? ? U . n A 1 5 GLN 5 5 ? ? ? U . n A 1 6 CYS 6 6 ? ? ? U . n A 1 7 GLU 7 7 ? ? ? U . n A 1 8 SER 8 8 ? ? ? U . n A 1 9 ASN 9 9 ? ? ? U . n A 1 10 GLN 10 10 ? ? ? U . n A 1 11 SER 11 11 ? ? ? U . n A 1 12 CYS 12 12 ? ? ? U . n A 1 13 LEU 13 13 ? ? ? U . n A 1 14 VAL 14 14 ? ? ? U . n A 1 15 GLU 15 15 ? ? ? U . n A 1 16 GLU 16 16 ? ? ? U . n A 1 17 CYS 17 17 ? ? ? U . n A 1 18 ALA 18 18 ? ? ? U . n A 1 19 LEU 19 19 ? ? ? U . n A 1 20 GLY 20 20 ? ? ? U . n A 1 21 GLN 21 21 ? ? ? U . n A 1 22 ASP 22 22 ? ? ? U . n A 1 23 LEU 23 23 ? ? ? U . n A 1 24 CYS 24 24 ? ? ? U . n A 1 25 ARG 25 25 ? ? ? U . n A 1 26 THR 26 26 ? ? ? U . n A 1 27 THR 27 27 ? ? ? U . n A 1 28 VAL 28 28 ? ? ? U . n A 1 29 LEU 29 29 ? ? ? U . n A 1 30 ARG 30 30 ? ? ? U . n A 1 31 GLU 31 31 ? ? ? U . n A 1 32 TRP 32 32 ? ? ? U . n A 1 33 GLN 33 33 ? ? ? U . n A 1 34 ASP 34 34 ? ? ? U . n A 1 35 ASP 35 35 ? ? ? U . n A 1 36 ARG 36 36 ? ? ? U . n A 1 37 GLU 37 37 ? ? ? U . n A 1 38 LEU 38 38 ? ? ? U . n A 1 39 GLU 39 39 ? ? ? U . n A 1 40 VAL 40 40 ? ? ? U . n A 1 41 VAL 41 41 ? ? ? U . n A 1 42 THR 42 42 ? ? ? U . n A 1 43 ARG 43 43 ? ? ? U . n A 1 44 GLY 44 44 ? ? ? U . n A 1 45 CYS 45 45 ? ? ? U . n A 1 46 ALA 46 46 ? ? ? U . n A 1 47 HIS 47 47 ? ? ? U . n A 1 48 SER 48 48 ? ? ? U . n A 1 49 GLU 49 49 ? ? ? U . n A 1 50 LYS 50 50 ? ? ? U . n A 1 51 THR 51 51 ? ? ? U . n A 1 52 ASN 52 52 ? ? ? U . n A 1 53 ARG 53 53 ? ? ? U . n A 1 54 THR 54 54 ? ? ? U . n A 1 55 MET 55 55 ? ? ? U . n A 1 56 SER 56 56 ? ? ? U . n A 1 57 TYR 57 57 ? ? ? U . n A 1 58 ARG 58 58 ? ? ? U . n A 1 59 MET 59 59 ? ? ? U . n A 1 60 GLY 60 60 ? ? ? U . n A 1 61 SER 61 61 ? ? ? U . n A 1 62 MET 62 62 ? ? ? U . n A 1 63 ILE 63 63 ? ? ? U . n A 1 64 ILE 64 64 ? ? ? U . n A 1 65 SER 65 65 ? ? ? U . n A 1 66 LEU 66 66 ? ? ? U . n A 1 67 THR 67 67 ? ? ? U . n A 1 68 GLU 68 68 ? ? ? U . n A 1 69 THR 69 69 ? ? ? U . n A 1 70 VAL 70 70 ? ? ? U . n A 1 71 CYS 71 71 ? ? ? U . n A 1 72 ALA 72 72 ? ? ? U . n A 1 73 THR 73 73 ? ? ? U . n A 1 74 ASN 74 74 ? ? ? U . n A 1 75 LEU 75 75 ? ? ? U . n A 1 76 CYS 76 76 ? ? ? U . n A 1 77 ASN 77 77 ? ? ? U . n A 1 78 ARG 78 78 ? ? ? U . n A 1 79 PRO 79 79 ? ? ? U . n A 1 80 ARG 80 80 ? ? ? U . n A 1 81 PRO 81 81 ? ? ? U . n A 1 82 GLY 82 82 ? ? ? U . n A 1 83 ALA 83 83 ? ? ? U . n A 1 84 ARG 84 84 ? ? ? U . n A 1 85 GLY 85 85 ? ? ? U . n A 1 86 ARG 86 86 ? ? ? U . n A 1 87 ALA 87 87 ? ? ? U . n A 1 88 PHE 88 88 ? ? ? U . n A 1 89 PRO 89 89 ? ? ? U . n A 1 90 GLN 90 90 ? ? ? U . n A 1 91 GLY 91 91 ? ? ? U . n A 1 92 ARG 92 92 92 ARG ARG U . n A 1 93 TYR 93 93 93 TYR TYR U . n A 1 94 LEU 94 94 94 LEU LEU U . n A 1 95 GLU 95 95 95 GLU GLU U . n A 1 96 CYS 96 96 96 CYS CYS U . n A 1 97 ALA 97 97 97 ALA ALA U . n A 1 98 SER 98 98 98 SER SER U . n A 1 99 CYS 99 99 99 CYS CYS U . n A 1 100 THR 100 100 100 THR THR U . n A 1 101 SER 101 101 101 SER SER U . n A 1 102 LEU 102 102 102 LEU LEU U . n A 1 103 ASP 103 103 103 ASP ASP U . n A 1 104 GLN 104 104 104 GLN GLN U . n A 1 105 SER 105 105 105 SER SER U . n A 1 106 CYS 106 106 106 CYS CYS U . n A 1 107 GLU 107 107 107 GLU GLU U . n A 1 108 ARG 108 108 108 ARG ARG U . n A 1 109 GLY 109 109 109 GLY GLY U . n A 1 110 ARG 110 110 110 ARG ARG U . n A 1 111 GLU 111 111 111 GLU GLU U . n A 1 112 GLN 112 112 112 GLN GLN U . n A 1 113 SER 113 113 113 SER SER U . n A 1 114 LEU 114 114 114 LEU LEU U . n A 1 115 GLN 115 115 115 GLN GLN U . n A 1 116 CYS 116 116 116 CYS CYS U . n A 1 117 ARG 117 117 117 ARG ARG U . n A 1 118 TYR 118 118 118 TYR TYR U . n A 1 119 PRO 119 119 119 PRO PRO U . n A 1 120 THR 120 120 120 THR THR U . n A 1 121 GLU 121 121 121 GLU GLU U . n A 1 122 HIS 122 122 122 HIS HIS U . n A 1 123 CYS 123 123 123 CYS CYS U . n A 1 124 ILE 124 124 124 ILE ILE U . n A 1 125 GLU 125 125 125 GLU GLU U . n A 1 126 VAL 126 126 126 VAL VAL U . n A 1 127 VAL 127 127 127 VAL VAL U . n A 1 128 THR 128 128 128 THR THR U . n A 1 129 LEU 129 129 129 LEU LEU U . n A 1 130 GLN 130 130 130 GLN GLN U . n A 1 131 SER 131 131 ? ? ? U . n A 1 132 THR 132 132 ? ? ? U . n A 1 133 GLU 133 133 ? ? ? U . n A 1 134 ARG 134 134 ? ? ? U . n A 1 135 SER 135 135 ? ? ? U . n A 1 136 LEU 136 136 ? ? ? U . n A 1 137 LYS 137 137 ? ? ? U . n A 1 138 ASP 138 138 138 ASP ASP U . n A 1 139 GLU 139 139 139 GLU GLU U . n A 1 140 ASP 140 140 140 ASP ASP U . n A 1 141 TYR 141 141 141 TYR TYR U . n A 1 142 THR 142 142 142 THR THR U . n A 1 143 ARG 143 143 143 ARG ARG U . n A 1 144 GLY 144 144 144 GLY GLY U . n A 1 145 CYS 145 145 145 CYS CYS U . n A 1 146 GLY 146 146 146 GLY GLY U . n A 1 147 SER 147 147 147 SER SER U . n A 1 148 LEU 148 148 148 LEU LEU U . n A 1 149 PRO 149 149 149 PRO PRO U . n A 1 150 GLY 150 150 150 GLY GLY U . n A 1 151 CYS 151 151 151 CYS CYS U . n A 1 152 PRO 152 152 152 PRO PRO U . n A 1 153 GLY 153 153 153 GLY GLY U . n A 1 154 THR 154 154 154 THR THR U . n A 1 155 ALA 155 155 155 ALA ALA U . n A 1 156 GLY 156 156 156 GLY GLY U . n A 1 157 PHE 157 157 157 PHE PHE U . n A 1 158 HIS 158 158 158 HIS HIS U . n A 1 159 SER 159 159 159 SER SER U . n A 1 160 ASN 160 160 160 ASN ASN U . n A 1 161 GLN 161 161 161 GLN GLN U . n A 1 162 THR 162 162 162 THR THR U . n A 1 163 PHE 163 163 163 PHE PHE U . n A 1 164 HIS 164 164 164 HIS HIS U . n A 1 165 PHE 165 165 165 PHE PHE U . n A 1 166 LEU 166 166 166 LEU LEU U . n A 1 167 LYS 167 167 167 LYS LYS U . n A 1 168 CYS 168 168 168 CYS CYS U . n A 1 169 CYS 169 169 169 CYS CYS U . n A 1 170 ASN 170 170 170 ASN ASN U . n A 1 171 TYR 171 171 171 TYR TYR U . n A 1 172 THR 172 172 172 THR THR U . n A 1 173 HIS 173 173 173 HIS HIS U . n A 1 174 CYS 174 174 174 CYS CYS U . n A 1 175 ASN 175 175 175 ASN ASN U . n A 1 176 GLY 176 176 176 GLY GLY U . n A 1 177 GLY 177 177 177 GLY GLY U . n A 1 178 PRO 178 178 178 PRO PRO U . n A 1 179 VAL 179 179 179 VAL VAL U . n A 1 180 LEU 180 180 180 LEU LEU U . n A 1 181 ASP 181 181 181 ASP ASP U . n A 1 182 LEU 182 182 182 LEU LEU U . n A 1 183 GLN 183 183 183 GLN GLN U . n A 1 184 SER 184 184 184 SER SER U . n A 1 185 PHE 185 185 185 PHE PHE U . n A 1 186 PRO 186 186 186 PRO PRO U . n A 1 187 PRO 187 187 187 PRO PRO U . n A 1 188 ASN 188 188 188 ASN ASN U . n A 1 189 GLY 189 189 189 GLY GLY U . n A 1 190 PHE 190 190 190 PHE PHE U . n A 1 191 GLN 191 191 191 GLN GLN U . n A 1 192 CYS 192 192 192 CYS CYS U . n A 1 193 TYR 193 193 193 TYR TYR U . n A 1 194 SER 194 194 194 SER SER U . n A 1 195 CYS 195 195 195 CYS CYS U . n A 1 196 GLU 196 196 196 GLU GLU U . n A 1 197 GLY 197 197 197 GLY GLY U . n A 1 198 ASN 198 198 ? ? ? U . n A 1 199 ASN 199 199 ? ? ? U . n A 1 200 THR 200 200 ? ? ? U . n A 1 201 LEU 201 201 ? ? ? U . n A 1 202 GLY 202 202 ? ? ? U . n A 1 203 CYS 203 203 203 CYS CYS U . n A 1 204 SER 204 204 204 SER SER U . n A 1 205 SER 205 205 205 SER SER U . n A 1 206 GLU 206 206 206 GLU GLU U . n A 1 207 GLU 207 207 207 GLU GLU U . n A 1 208 ALA 208 208 208 ALA ALA U . n A 1 209 SER 209 209 209 SER SER U . n A 1 210 LEU 210 210 210 LEU LEU U . n A 1 211 ILE 211 211 211 ILE ILE U . n A 1 212 ASN 212 212 212 ASN ASN U . n A 1 213 CYS 213 213 213 CYS CYS U . n A 1 214 ARG 214 214 214 ARG ARG U . n A 1 215 GLY 215 215 215 GLY GLY U . n A 1 216 PRO 216 216 216 PRO PRO U . n A 1 217 MET 217 217 217 MET MET U . n A 1 218 ASN 218 218 218 ASN ASN U . n A 1 219 GLN 219 219 219 GLN GLN U . n A 1 220 CYS 220 220 220 CYS CYS U . n A 1 221 LEU 221 221 221 LEU LEU U . n A 1 222 VAL 222 222 222 VAL VAL U . n A 1 223 ALA 223 223 223 ALA ALA U . n A 1 224 THR 224 224 224 THR THR U . n A 1 225 GLY 225 225 225 GLY GLY U . n A 1 226 LEU 226 226 226 LEU LEU U . n A 1 227 ASP 227 227 ? ? ? U . n A 1 228 VAL 228 228 ? ? ? U . n A 1 229 LEU 229 229 ? ? ? U . n A 1 230 GLY 230 230 ? ? ? U . n A 1 231 ASN 231 231 ? ? ? U . n A 1 232 ARG 232 232 ? ? ? U . n A 1 233 SER 233 233 233 SER SER U . n A 1 234 TYR 234 234 234 TYR TYR U . n A 1 235 THR 235 235 235 THR THR U . n A 1 236 VAL 236 236 236 VAL VAL U . n A 1 237 ARG 237 237 237 ARG ARG U . n A 1 238 GLY 238 238 238 GLY GLY U . n A 1 239 CYS 239 239 239 CYS CYS U . n A 1 240 ALA 240 240 240 ALA ALA U . n A 1 241 THR 241 241 241 THR THR U . n A 1 242 ALA 242 242 242 ALA ALA U . n A 1 243 SER 243 243 243 SER SER U . n A 1 244 TRP 244 244 244 TRP TRP U . n A 1 245 CYS 245 245 245 CYS CYS U . n A 1 246 GLN 246 246 246 GLN GLN U . n A 1 247 GLY 247 247 247 GLY GLY U . n A 1 248 SER 248 248 248 SER SER U . n A 1 249 HIS 249 249 249 HIS HIS U . n A 1 250 VAL 250 250 250 VAL VAL U . n A 1 251 ALA 251 251 251 ALA ALA U . n A 1 252 ASP 252 252 252 ASP ASP U . n A 1 253 SER 253 253 253 SER SER U . n A 1 254 PHE 254 254 254 PHE PHE U . n A 1 255 PRO 255 255 255 PRO PRO U . n A 1 256 THR 256 256 256 THR THR U . n A 1 257 HIS 257 257 257 HIS HIS U . n A 1 258 LEU 258 258 258 LEU LEU U . n A 1 259 ASN 259 259 259 ASN ASN U . n A 1 260 VAL 260 260 260 VAL VAL U . n A 1 261 SER 261 261 261 SER SER U . n A 1 262 VAL 262 262 262 VAL VAL U . n A 1 263 SER 263 263 263 SER SER U . n A 1 264 CYS 264 264 264 CYS CYS U . n A 1 265 CYS 265 265 265 CYS CYS U . n A 1 266 HIS 266 266 266 HIS HIS U . n A 1 267 GLY 267 267 267 GLY GLY U . n A 1 268 SER 268 268 268 SER SER U . n A 1 269 GLY 269 269 269 GLY GLY U . n A 1 270 CYS 270 270 270 CYS CYS U . n A 1 271 ASN 271 271 271 ASN ASN U . n A 1 272 SER 272 272 272 SER SER U . n A 1 273 PRO 273 273 273 PRO PRO U . n A 1 274 THR 274 274 274 THR THR U . n A 1 275 GLY 275 275 ? ? ? U . n A 1 276 GLY 276 276 ? ? ? U . n A 1 277 ALA 277 277 ? ? ? U . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NAG 1 301 1160 NAG NAG U . C 3 HOH 1 401 19 HOH HOH U . C 3 HOH 2 402 20 HOH HOH U . C 3 HOH 3 403 3 HOH HOH U . C 3 HOH 4 404 28 HOH HOH U . C 3 HOH 5 405 16 HOH HOH U . C 3 HOH 6 406 2 HOH HOH U . C 3 HOH 7 407 14 HOH HOH U . C 3 HOH 8 408 6 HOH HOH U . C 3 HOH 9 409 12 HOH HOH U . C 3 HOH 10 410 29 HOH HOH U . C 3 HOH 11 411 24 HOH HOH U . C 3 HOH 12 412 10 HOH HOH U . C 3 HOH 13 413 21 HOH HOH U . C 3 HOH 14 414 8 HOH HOH U . C 3 HOH 15 415 7 HOH HOH U . C 3 HOH 16 416 1 HOH HOH U . C 3 HOH 17 417 5 HOH HOH U . C 3 HOH 18 418 26 HOH HOH U . C 3 HOH 19 419 4 HOH HOH U . C 3 HOH 20 420 18 HOH HOH U . C 3 HOH 21 421 11 HOH HOH U . C 3 HOH 22 422 13 HOH HOH U . C 3 HOH 23 423 25 HOH HOH U . C 3 HOH 24 424 17 HOH HOH U . C 3 HOH 25 425 27 HOH HOH U . C 3 HOH 26 426 23 HOH HOH U . C 3 HOH 27 427 22 HOH HOH U . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 220 ? 1 MORE 2 ? 1 'SSA (A^2)' 9040 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-07-17 2 'Structure model' 1 1 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Derived calculations' 3 2 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp 2 2 'Structure model' entity 3 2 'Structure model' pdbx_chem_comp_identifier 4 2 'Structure model' pdbx_entity_nonpoly 5 2 'Structure model' struct_conn 6 2 'Structure model' struct_site 7 2 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_chem_comp.name' 2 2 'Structure model' '_chem_comp.type' 3 2 'Structure model' '_entity.pdbx_description' 4 2 'Structure model' '_pdbx_entity_nonpoly.name' 5 2 'Structure model' '_struct_conn.pdbx_role' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 60.8421 27.7826 47.6551 1.3021 1.8050 0.9468 -0.2089 -0.1777 0.1313 4.1625 3.4832 6.9305 0.3286 4.5950 2.9261 -1.5436 -1.0501 0.8048 1.5421 -1.1330 -0.1137 0.4289 2.5940 1.1944 'X-RAY DIFFRACTION' 2 ? refined 59.8356 26.1644 31.4866 0.3487 0.4588 0.3805 -0.0202 0.0451 0.1018 1.0861 3.4293 2.8436 -1.5152 0.3312 0.0030 -0.2645 -0.0764 -0.4918 -0.1886 -0.1521 0.2171 0.4077 -0.1260 0.3688 'X-RAY DIFFRACTION' 3 ? refined 74.3776 32.8935 42.3537 0.5351 1.0210 1.1965 -0.1219 -0.2506 -0.1515 8.2535 7.5404 4.4454 7.8970 1.9004 1.6604 -0.1145 -1.7195 3.5115 0.5856 0.6425 -1.7157 -0.6411 1.7672 -0.3818 'X-RAY DIFFRACTION' 4 ? refined 65.9468 28.1845 31.1960 0.2696 0.5120 0.3416 -0.0410 0.0205 0.0352 1.5963 6.2059 3.3710 -1.8696 1.1279 0.4690 0.4646 -0.4819 -0.2597 -0.0059 -0.4551 0.4492 -0.4714 0.2273 0.2036 'X-RAY DIFFRACTION' 5 ? refined 72.8168 29.3670 27.5488 0.5483 0.7651 0.6612 0.0563 -0.0781 0.1977 7.0272 1.9053 5.6395 1.2797 -2.4783 0.0806 0.3918 -0.0878 0.7563 -0.3876 -0.9175 -0.9738 -0.3584 -0.0834 0.5373 'X-RAY DIFFRACTION' 6 ? refined 74.3676 37.7751 34.3606 1.2609 1.4446 1.7059 -0.2419 -0.1215 0.2080 5.4630 8.4678 1.1694 3.8664 1.1978 -1.2462 -1.2384 -2.3526 0.9313 -2.2574 -0.6027 0.5314 -1.2209 0.1394 0.8372 'X-RAY DIFFRACTION' 7 ? refined 78.7780 32.4647 36.7488 0.6137 0.8010 1.2314 -0.1161 0.0207 0.0108 0.0697 0.1755 3.4553 0.1096 -0.4578 -0.7917 -0.0879 -1.1357 0.5641 0.2992 0.3565 -1.5098 -1.8399 1.1920 -0.1505 'X-RAY DIFFRACTION' 8 ? refined 63.9357 19.9558 37.0491 0.4220 0.6551 0.5517 0.0956 0.0333 0.1941 2.2085 2.8278 1.5158 1.9620 -0.8340 -0.4257 -0.3987 -0.5768 -1.0685 -0.0234 0.1849 -0.4626 0.0926 0.3493 -0.0002 'X-RAY DIFFRACTION' 9 ? refined 68.0949 43.8175 5.6880 0.5647 0.4128 0.6625 -0.0321 0.1839 -0.0388 5.0452 5.6759 8.8384 0.9745 0.1268 0.0379 0.6506 0.5707 0.3353 -1.4280 0.1546 -0.9549 -0.4203 0.7617 -0.9576 'X-RAY DIFFRACTION' 10 ? refined 61.2695 51.8884 20.0068 1.0859 0.5420 1.0161 0.0078 0.3120 0.1575 3.4668 5.4216 2.3400 -1.4894 0.3026 3.2017 -0.3978 0.3533 0.6475 2.4189 0.6189 3.2775 -0.5393 -0.0108 0.0071 'X-RAY DIFFRACTION' 11 ? refined 54.9026 50.8997 14.7584 0.8530 0.9788 1.6098 0.1498 -0.0652 0.2014 6.3607 3.5907 8.5464 -1.1063 -2.5168 0.5068 -1.2188 -1.4333 0.8117 0.1979 -0.3357 0.1154 -0.7539 0.6225 0.9459 'X-RAY DIFFRACTION' 12 ? refined 69.0592 47.1792 7.3901 0.5946 0.3517 0.6901 0.1131 0.1312 0.0419 3.1656 3.9981 6.8397 -2.8536 -3.7076 1.9865 -0.4614 -0.8895 -0.5424 0.2127 0.2326 -0.7124 0.2830 0.7295 0.1878 'X-RAY DIFFRACTION' 13 ? refined 74.7095 38.0188 7.9210 0.7401 1.0727 1.2450 -0.0139 0.1197 0.2090 3.8750 2.0895 3.2507 1.3702 -0.1082 -2.0289 0.1809 1.8853 -1.7071 -0.6246 0.3559 -1.4042 -0.0003 2.0395 -0.2413 'X-RAY DIFFRACTION' 14 ? refined 63.4798 41.8606 24.6322 0.9752 0.3614 0.6456 0.0212 0.1247 -0.0236 3.6972 1.4644 6.7741 0.4568 -1.0865 -0.6106 0.1386 -0.4654 0.2031 0.7654 0.1458 0.4192 -2.4651 0.4376 -0.3116 'X-RAY DIFFRACTION' 15 ? refined 64.5261 44.6422 19.2132 0.5345 0.3471 0.5539 0.0377 0.0280 -0.0234 2.2782 6.2866 9.1465 0.8932 -2.3474 0.7827 -0.6409 -0.4268 0.9575 0.0131 -0.0174 0.5109 0.0861 0.8601 0.3725 'X-RAY DIFFRACTION' 16 ? refined 72.6130 33.4718 15.0855 0.7477 0.7161 1.0501 0.2752 0.0231 0.0736 0.2293 0.7808 2.5550 -0.4295 -0.7825 1.4323 -1.4050 -1.5161 0.5031 0.9809 0.0096 -0.9594 1.0510 0.2209 1.3538 'X-RAY DIFFRACTION' 17 ? refined 61.6358 33.3284 30.7052 0.3444 0.3241 0.5153 0.0020 0.0163 0.0110 7.6263 4.5627 3.6932 -0.0878 -4.7525 -0.3054 0.5895 -1.0350 0.4548 0.2429 0.1246 0.0578 -1.2306 0.8316 -0.7399 'X-RAY DIFFRACTION' 18 ? refined 64.3440 35.8740 16.8219 0.5357 0.3240 0.4000 0.0082 0.0613 0.0021 1.8846 1.2344 9.7800 0.6334 -0.2756 -0.6375 -0.0888 0.0278 -0.1281 -0.1635 0.1498 -0.3499 0.1187 0.0044 0.1651 'X-RAY DIFFRACTION' 19 ? refined 55.5444 33.7442 22.0691 0.3435 0.3397 0.4280 0.0450 0.0881 0.0714 1.9246 3.3157 3.3503 1.1268 -0.9521 -0.7290 0.3692 -0.2560 -0.0014 0.3126 -0.1325 0.1719 -0.6422 -0.0491 -0.2498 'X-RAY DIFFRACTION' 20 ? refined 61.5133 29.3915 40.0867 0.5206 0.6007 0.7723 -0.0177 0.0868 0.0473 5.5388 6.8966 6.7126 5.7384 3.8678 5.2859 0.8501 -0.6269 0.3141 -0.1862 -0.5820 -1.6768 -0.7338 -0.4488 -0.1198 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? '(chain U and resid 203:209)' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? '(chain U and resid 210:223)' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? '(chain U and resid 224:235)' 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? '(chain U and resid 236:244)' 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? '(chain U and resid 245:250)' 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? '(chain U and resid 251:256)' 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? '(chain U and resid 257:262)' 'X-RAY DIFFRACTION' 8 8 ? ? ? ? ? ? ? ? ? '(chain U and resid 263:274)' 'X-RAY DIFFRACTION' 9 9 ? ? ? ? ? ? ? ? ? '(chain U and resid 92:98)' 'X-RAY DIFFRACTION' 10 10 ? ? ? ? ? ? ? ? ? '(chain U and resid 99:106)' 'X-RAY DIFFRACTION' 11 11 ? ? ? ? ? ? ? ? ? '(chain U and resid 107:111)' 'X-RAY DIFFRACTION' 12 12 ? ? ? ? ? ? ? ? ? '(chain U and resid 112:117)' 'X-RAY DIFFRACTION' 13 13 ? ? ? ? ? ? ? ? ? '(chain U and resid 118:122)' 'X-RAY DIFFRACTION' 14 14 ? ? ? ? ? ? ? ? ? '(chain U and resid 123:139)' 'X-RAY DIFFRACTION' 15 15 ? ? ? ? ? ? ? ? ? '(chain U and resid 140:145)' 'X-RAY DIFFRACTION' 16 16 ? ? ? ? ? ? ? ? ? '(chain U and resid 146:152)' 'X-RAY DIFFRACTION' 17 17 ? ? ? ? ? ? ? ? ? '(chain U and resid 153:162)' 'X-RAY DIFFRACTION' 18 18 ? ? ? ? ? ? ? ? ? '(chain U and resid 163:172)' 'X-RAY DIFFRACTION' 19 19 ? ? ? ? ? ? ? ? ? '(chain U and resid 173:191)' 'X-RAY DIFFRACTION' 20 20 ? ? ? ? ? ? ? ? ? '(chain U and resid 192:197)' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.13_2998)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? MOLREP ? ? ? . 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OD1 _pdbx_validate_close_contact.auth_asym_id_1 U _pdbx_validate_close_contact.auth_comp_id_1 ASN _pdbx_validate_close_contact.auth_seq_id_1 160 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O7 _pdbx_validate_close_contact.auth_asym_id_2 U _pdbx_validate_close_contact.auth_comp_id_2 NAG _pdbx_validate_close_contact.auth_seq_id_2 301 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.57 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG U 108 ? ? -170.49 148.29 2 1 HIS U 173 ? ? 54.91 18.37 3 1 GLU U 206 ? ? -66.09 8.38 4 1 GLU U 207 ? ? -157.82 -30.94 5 1 THR U 256 ? ? 48.63 -152.98 6 1 HIS U 257 ? ? -108.43 71.87 7 1 ASN U 271 ? ? -96.06 30.67 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 U ARG 92 ? CG ? A ARG 92 CG 2 1 Y 1 U ARG 92 ? CD ? A ARG 92 CD 3 1 Y 1 U ARG 92 ? NE ? A ARG 92 NE 4 1 Y 1 U ARG 92 ? CZ ? A ARG 92 CZ 5 1 Y 1 U ARG 92 ? NH1 ? A ARG 92 NH1 6 1 Y 1 U ARG 92 ? NH2 ? A ARG 92 NH2 7 1 Y 1 U GLU 139 ? CG ? A GLU 139 CG 8 1 Y 1 U GLU 139 ? CD ? A GLU 139 CD 9 1 Y 1 U GLU 139 ? OE1 ? A GLU 139 OE1 10 1 Y 1 U GLU 139 ? OE2 ? A GLU 139 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 U LEU 1 ? A LEU 1 2 1 Y 1 U GLN 2 ? A GLN 2 3 1 Y 1 U CYS 3 ? A CYS 3 4 1 Y 1 U MET 4 ? A MET 4 5 1 Y 1 U GLN 5 ? A GLN 5 6 1 Y 1 U CYS 6 ? A CYS 6 7 1 Y 1 U GLU 7 ? A GLU 7 8 1 Y 1 U SER 8 ? A SER 8 9 1 Y 1 U ASN 9 ? A ASN 9 10 1 Y 1 U GLN 10 ? A GLN 10 11 1 Y 1 U SER 11 ? A SER 11 12 1 Y 1 U CYS 12 ? A CYS 12 13 1 Y 1 U LEU 13 ? A LEU 13 14 1 Y 1 U VAL 14 ? A VAL 14 15 1 Y 1 U GLU 15 ? A GLU 15 16 1 Y 1 U GLU 16 ? A GLU 16 17 1 Y 1 U CYS 17 ? A CYS 17 18 1 Y 1 U ALA 18 ? A ALA 18 19 1 Y 1 U LEU 19 ? A LEU 19 20 1 Y 1 U GLY 20 ? A GLY 20 21 1 Y 1 U GLN 21 ? A GLN 21 22 1 Y 1 U ASP 22 ? A ASP 22 23 1 Y 1 U LEU 23 ? A LEU 23 24 1 Y 1 U CYS 24 ? A CYS 24 25 1 Y 1 U ARG 25 ? A ARG 25 26 1 Y 1 U THR 26 ? A THR 26 27 1 Y 1 U THR 27 ? A THR 27 28 1 Y 1 U VAL 28 ? A VAL 28 29 1 Y 1 U LEU 29 ? A LEU 29 30 1 Y 1 U ARG 30 ? A ARG 30 31 1 Y 1 U GLU 31 ? A GLU 31 32 1 Y 1 U TRP 32 ? A TRP 32 33 1 Y 1 U GLN 33 ? A GLN 33 34 1 Y 1 U ASP 34 ? A ASP 34 35 1 Y 1 U ASP 35 ? A ASP 35 36 1 Y 1 U ARG 36 ? A ARG 36 37 1 Y 1 U GLU 37 ? A GLU 37 38 1 Y 1 U LEU 38 ? A LEU 38 39 1 Y 1 U GLU 39 ? A GLU 39 40 1 Y 1 U VAL 40 ? A VAL 40 41 1 Y 1 U VAL 41 ? A VAL 41 42 1 Y 1 U THR 42 ? A THR 42 43 1 Y 1 U ARG 43 ? A ARG 43 44 1 Y 1 U GLY 44 ? A GLY 44 45 1 Y 1 U CYS 45 ? A CYS 45 46 1 Y 1 U ALA 46 ? A ALA 46 47 1 Y 1 U HIS 47 ? A HIS 47 48 1 Y 1 U SER 48 ? A SER 48 49 1 Y 1 U GLU 49 ? A GLU 49 50 1 Y 1 U LYS 50 ? A LYS 50 51 1 Y 1 U THR 51 ? A THR 51 52 1 Y 1 U ASN 52 ? A ASN 52 53 1 Y 1 U ARG 53 ? A ARG 53 54 1 Y 1 U THR 54 ? A THR 54 55 1 Y 1 U MET 55 ? A MET 55 56 1 Y 1 U SER 56 ? A SER 56 57 1 Y 1 U TYR 57 ? A TYR 57 58 1 Y 1 U ARG 58 ? A ARG 58 59 1 Y 1 U MET 59 ? A MET 59 60 1 Y 1 U GLY 60 ? A GLY 60 61 1 Y 1 U SER 61 ? A SER 61 62 1 Y 1 U MET 62 ? A MET 62 63 1 Y 1 U ILE 63 ? A ILE 63 64 1 Y 1 U ILE 64 ? A ILE 64 65 1 Y 1 U SER 65 ? A SER 65 66 1 Y 1 U LEU 66 ? A LEU 66 67 1 Y 1 U THR 67 ? A THR 67 68 1 Y 1 U GLU 68 ? A GLU 68 69 1 Y 1 U THR 69 ? A THR 69 70 1 Y 1 U VAL 70 ? A VAL 70 71 1 Y 1 U CYS 71 ? A CYS 71 72 1 Y 1 U ALA 72 ? A ALA 72 73 1 Y 1 U THR 73 ? A THR 73 74 1 Y 1 U ASN 74 ? A ASN 74 75 1 Y 1 U LEU 75 ? A LEU 75 76 1 Y 1 U CYS 76 ? A CYS 76 77 1 Y 1 U ASN 77 ? A ASN 77 78 1 Y 1 U ARG 78 ? A ARG 78 79 1 Y 1 U PRO 79 ? A PRO 79 80 1 Y 1 U ARG 80 ? A ARG 80 81 1 Y 1 U PRO 81 ? A PRO 81 82 1 Y 1 U GLY 82 ? A GLY 82 83 1 Y 1 U ALA 83 ? A ALA 83 84 1 Y 1 U ARG 84 ? A ARG 84 85 1 Y 1 U GLY 85 ? A GLY 85 86 1 Y 1 U ARG 86 ? A ARG 86 87 1 Y 1 U ALA 87 ? A ALA 87 88 1 Y 1 U PHE 88 ? A PHE 88 89 1 Y 1 U PRO 89 ? A PRO 89 90 1 Y 1 U GLN 90 ? A GLN 90 91 1 Y 1 U GLY 91 ? A GLY 91 92 1 Y 1 U SER 131 ? A SER 131 93 1 Y 1 U THR 132 ? A THR 132 94 1 Y 1 U GLU 133 ? A GLU 133 95 1 Y 1 U ARG 134 ? A ARG 134 96 1 Y 1 U SER 135 ? A SER 135 97 1 Y 1 U LEU 136 ? A LEU 136 98 1 Y 1 U LYS 137 ? A LYS 137 99 1 Y 1 U ASN 198 ? A ASN 198 100 1 Y 1 U ASN 199 ? A ASN 199 101 1 Y 1 U THR 200 ? A THR 200 102 1 Y 1 U LEU 201 ? A LEU 201 103 1 Y 1 U GLY 202 ? A GLY 202 104 1 Y 1 U ASP 227 ? A ASP 227 105 1 Y 1 U VAL 228 ? A VAL 228 106 1 Y 1 U LEU 229 ? A LEU 229 107 1 Y 1 U GLY 230 ? A GLY 230 108 1 Y 1 U ASN 231 ? A ASN 231 109 1 Y 1 U ARG 232 ? A ARG 232 110 1 Y 1 U GLY 275 ? A GLY 275 111 1 Y 1 U GLY 276 ? A GLY 276 112 1 Y 1 U ALA 277 ? A ALA 277 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Natural Science Foundation of China' China 31370737 1 'National Natural Science Foundation of China' China 31400637 2 'National Natural Science Foundation of China' China 31570745 3 'National Natural Science Foundation of China' China 31670739 4 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # _pdbx_entity_instance_feature.ordinal 1 _pdbx_entity_instance_feature.comp_id NAG _pdbx_entity_instance_feature.asym_id ? _pdbx_entity_instance_feature.seq_num ? _pdbx_entity_instance_feature.auth_comp_id NAG _pdbx_entity_instance_feature.auth_asym_id ? _pdbx_entity_instance_feature.auth_seq_num ? _pdbx_entity_instance_feature.feature_type 'SUBJECT OF INVESTIGATION' _pdbx_entity_instance_feature.details ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 3 water HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? #