HEADER VIRUS 26-AUG-18 6AJ2 TITLE THE STRUCTURE OF ICAM-5 TRIGGERED ENTEROVIRUS D68 VIRUS A-PARTICLE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN VP1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: VIRION PROTEIN 1; COMPND 5 EC: 3.4.22.29,3.6.1.15,3.4.22.28,2.7.7.48; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: CAPSID PROTEIN VP2; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: VIRION PROTEIN 2; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: CAPSID PROTEIN VP3; COMPND 12 CHAIN: C; COMPND 13 SYNONYM: VIRION PROTEIN 3 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTEROVIRUS D68; SOURCE 3 ORGANISM_TAXID: 42789; SOURCE 4 MOL_ID: 2; SOURCE 5 ORGANISM_SCIENTIFIC: ENTEROVIRUS D68; SOURCE 6 ORGANISM_TAXID: 42789; SOURCE 7 MOL_ID: 3; SOURCE 8 ORGANISM_SCIENTIFIC: ENTEROVIRUS D68; SOURCE 9 ORGANISM_TAXID: 42789 KEYWDS ENTEROVIRUS D68, ICAM-5, A-PATICLE, VIRUS EXPDTA ELECTRON MICROSCOPY AUTHOR Q.B.ZHENG,R.ZHU,L.F.XU,M.Z.HE,X.D.YAN,T.CHENG,S.W.LI REVDAT 4 23-MAR-22 6AJ2 1 REMARK REVDAT 3 26-DEC-18 6AJ2 1 JRNL REVDAT 2 21-NOV-18 6AJ2 1 JRNL REVDAT 1 07-NOV-18 6AJ2 0 JRNL AUTH Q.ZHENG,R.ZHU,L.XU,M.HE,X.YAN,D.LIU,Z.YIN,Y.WU,Y.LI,L.YANG, JRNL AUTH 2 W.HOU,S.LI,Z.LI,Z.CHEN,Z.LI,H.YU,Y.GU,J.ZHANG,T.S.BAKER, JRNL AUTH 3 Z.H.ZHOU,B.S.GRAHAM,T.CHENG,S.LI,N.XIA JRNL TITL ATOMIC STRUCTURES OF ENTEROVIRUS D68 IN COMPLEX WITH TWO JRNL TITL 2 MONOCLONAL ANTIBODIES DEFINE DISTINCT MECHANISMS OF VIRAL JRNL TITL 3 NEUTRALIZATION JRNL REF NAT MICROBIOL V. 4 124 2019 JRNL REFN ESSN 2058-5276 JRNL PMID 30397341 JRNL DOI 10.1038/S41564-018-0275-7 REMARK 2 REMARK 2 RESOLUTION. 4.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : RELION REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 4.000 REMARK 3 NUMBER OF PARTICLES : 9625 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING ONLY REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6AJ2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 02-SEP-18. REMARK 100 THE DEPOSITION ID IS D_1300008858. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : ENTEROVIRUS D REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TECNAI F30 REMARK 245 DETECTOR TYPE : FEI FALCON II (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 2500.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 ICOSAHEDRAL POINT SYMMETRY (SCHOENFLIES SYMBOL = I). REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.809017 -0.309017 410.30846 REMARK 350 BIOMT2 2 0.809017 0.309017 0.500000 -156.29301 REMARK 350 BIOMT3 2 -0.309017 -0.500000 0.809017 253.58458 REMARK 350 BIOMT1 3 -0.309017 -0.500000 -0.809017 663.54445 REMARK 350 BIOMT2 3 0.500000 -0.809017 0.309017 254.14860 REMARK 350 BIOMT3 3 -0.809017 -0.309017 0.500000 410.09303 REMARK 350 BIOMT1 4 -0.309017 0.500000 -0.809017 409.74444 REMARK 350 BIOMT2 4 -0.500000 -0.809017 -0.309017 664.10848 REMARK 350 BIOMT3 4 -0.809017 0.309017 0.500000 253.23599 REMARK 350 BIOMT1 5 0.500000 0.809017 -0.309017 -0.34858 REMARK 350 BIOMT2 5 -0.809017 0.309017 -0.500000 507.03601 REMARK 350 BIOMT3 5 -0.309017 0.500000 0.809017 -0.21544 REMARK 350 BIOMT1 6 -0.809017 0.309017 -0.500000 507.03595 REMARK 350 BIOMT2 6 0.309017 -0.500000 -0.809017 506.68744 REMARK 350 BIOMT3 6 -0.500000 -0.809017 0.309017 506.82063 REMARK 350 BIOMT1 7 0.000000 1.000000 0.000000 -0.00005 REMARK 350 BIOMT2 7 0.000000 0.000000 -1.000000 506.47203 REMARK 350 BIOMT3 7 -1.000000 0.000000 0.000000 506.47199 REMARK 350 BIOMT1 8 0.809017 0.309017 0.500000 -156.29302 REMARK 350 BIOMT2 8 0.309017 0.500000 -0.809017 252.88748 REMARK 350 BIOMT3 8 -0.500000 0.809017 0.309017 96.16349 REMARK 350 BIOMT1 9 0.500000 -0.809017 0.309017 254.14861 REMARK 350 BIOMT2 9 0.809017 0.309017 -0.500000 96.37903 REMARK 350 BIOMT3 9 0.309017 0.500000 0.809017 -157.07246 REMARK 350 BIOMT1 10 -0.500000 -0.809017 -0.309017 664.10847 REMARK 350 BIOMT2 10 0.809017 -0.309017 -0.500000 253.23603 REMARK 350 BIOMT3 10 0.309017 -0.500000 0.809017 96.72761 REMARK 350 BIOMT1 11 -0.500000 -0.809017 -0.309017 664.10846 REMARK 350 BIOMT2 11 -0.809017 0.309017 0.500000 254.36392 REMARK 350 BIOMT3 11 -0.309017 0.500000 -0.809017 408.61643 REMARK 350 BIOMT1 12 -0.809017 0.309017 -0.500000 507.03591 REMARK 350 BIOMT2 12 -0.309017 0.500000 0.809017 0.91254 REMARK 350 BIOMT3 12 0.500000 0.809017 -0.309017 -1.47659 REMARK 350 BIOMT1 13 0.000000 1.000000 0.000000 -0.00010 REMARK 350 BIOMT2 13 0.000000 0.000000 1.000000 1.12806 REMARK 350 BIOMT3 13 1.000000 0.000000 0.000000 -1.12796 REMARK 350 BIOMT1 14 0.809017 0.309017 0.500000 -156.29303 REMARK 350 BIOMT2 14 -0.309017 -0.500000 0.809017 254.71264 REMARK 350 BIOMT3 14 0.500000 -0.809017 -0.309017 409.18053 REMARK 350 BIOMT1 15 0.500000 -0.809017 0.309017 254.14863 REMARK 350 BIOMT2 15 -0.809017 -0.309017 0.500000 411.22101 REMARK 350 BIOMT3 15 -0.309017 -0.500000 -0.809017 662.41649 REMARK 350 BIOMT1 16 0.309017 0.500000 0.809017 -155.94448 REMARK 350 BIOMT2 16 0.500000 -0.809017 0.309017 254.14871 REMARK 350 BIOMT3 16 0.809017 0.309017 -0.500000 95.25099 REMARK 350 BIOMT1 17 0.309017 -0.500000 0.809017 97.85562 REMARK 350 BIOMT2 17 -0.500000 -0.809017 -0.309017 664.10851 REMARK 350 BIOMT3 17 0.809017 -0.309017 -0.500000 252.10808 REMARK 350 BIOMT1 18 -0.500000 -0.809017 0.309017 507.94860 REMARK 350 BIOMT2 18 -0.809017 0.309017 -0.500000 507.03592 REMARK 350 BIOMT3 18 0.309017 -0.500000 -0.809017 505.55950 REMARK 350 BIOMT1 19 -1.000000 0.000000 0.000000 507.59991 REMARK 350 BIOMT2 19 0.000000 1.000000 0.000000 -0.00008 REMARK 350 BIOMT3 19 0.000000 0.000000 -1.000000 505.34400 REMARK 350 BIOMT1 20 -0.500000 0.809017 0.309017 97.29142 REMARK 350 BIOMT2 20 0.809017 0.309017 0.500000 -156.29298 REMARK 350 BIOMT3 20 0.309017 0.500000 -0.809017 251.75940 REMARK 350 BIOMT1 21 -0.500000 -0.809017 0.309017 507.94856 REMARK 350 BIOMT2 21 0.809017 -0.309017 0.500000 0.56405 REMARK 350 BIOMT3 21 -0.309017 0.500000 0.809017 -0.21546 REMARK 350 BIOMT1 22 -1.000000 0.000000 0.000000 507.59997 REMARK 350 BIOMT2 22 0.000000 -1.000000 0.000000 507.60006 REMARK 350 BIOMT3 22 0.000000 0.000000 1.000000 0.00004 REMARK 350 BIOMT1 23 -0.500000 0.809017 0.309017 97.29151 REMARK 350 BIOMT2 23 -0.809017 -0.309017 -0.500000 663.89304 REMARK 350 BIOMT3 23 -0.309017 -0.500000 0.809017 253.58462 REMARK 350 BIOMT1 24 0.309017 0.500000 0.809017 -155.94449 REMARK 350 BIOMT2 24 -0.500000 0.809017 -0.309017 253.45141 REMARK 350 BIOMT3 24 -0.809017 -0.309017 0.500000 410.09302 REMARK 350 BIOMT1 25 0.309017 -0.500000 0.809017 97.85553 REMARK 350 BIOMT2 25 0.500000 0.809017 0.309017 -156.50845 REMARK 350 BIOMT3 25 -0.809017 0.309017 0.500000 253.23594 REMARK 350 BIOMT1 26 0.000000 0.000000 1.000000 1.12801 REMARK 350 BIOMT2 26 -1.000000 0.000000 0.000000 507.59999 REMARK 350 BIOMT3 26 0.000000 -1.000000 0.000000 506.47208 REMARK 350 BIOMT1 27 -0.309017 -0.500000 0.809017 254.71255 REMARK 350 BIOMT2 27 -0.500000 0.809017 0.309017 97.29147 REMARK 350 BIOMT3 27 -0.809017 -0.309017 -0.500000 662.76502 REMARK 350 BIOMT1 28 -0.809017 -0.309017 0.500000 411.22095 REMARK 350 BIOMT2 28 0.309017 0.500000 0.809017 -155.94447 REMARK 350 BIOMT3 28 -0.500000 0.809017 -0.309017 252.32336 REMARK 350 BIOMT1 29 -0.809017 0.309017 0.500000 254.36393 REMARK 350 BIOMT2 29 0.309017 -0.500000 0.809017 97.85563 REMARK 350 BIOMT3 29 0.500000 0.809017 0.309017 -157.63647 REMARK 350 BIOMT1 30 -0.309017 0.500000 0.809017 0.91255 REMARK 350 BIOMT2 30 -0.500000 -0.809017 0.309017 507.94866 REMARK 350 BIOMT3 30 0.809017 -0.309017 0.500000 -0.56392 REMARK 350 BIOMT1 31 0.809017 0.309017 -0.500000 96.37901 REMARK 350 BIOMT2 31 -0.309017 -0.500000 -0.809017 663.54450 REMARK 350 BIOMT3 31 -0.500000 0.809017 -0.309017 252.32340 REMARK 350 BIOMT1 32 0.809017 -0.309017 -0.500000 253.23605 REMARK 350 BIOMT2 32 -0.309017 0.500000 -0.809017 409.74445 REMARK 350 BIOMT3 32 0.500000 0.809017 0.309017 -157.63646 REMARK 350 BIOMT1 33 0.309017 -0.500000 -0.809017 506.68743 REMARK 350 BIOMT2 33 0.500000 0.809017 -0.309017 -0.34859 REMARK 350 BIOMT3 33 0.809017 -0.309017 0.500000 -0.56394 REMARK 350 BIOMT1 34 0.000000 0.000000 -1.000000 506.47195 REMARK 350 BIOMT2 34 1.000000 0.000000 0.000000 0.00002 REMARK 350 BIOMT3 34 0.000000 -1.000000 0.000000 506.47206 REMARK 350 BIOMT1 35 0.309017 0.500000 -0.809017 252.88740 REMARK 350 BIOMT2 35 0.500000 -0.809017 -0.309017 410.30851 REMARK 350 BIOMT3 35 -0.809017 -0.309017 -0.500000 662.76503 REMARK 350 BIOMT1 36 -0.309017 0.500000 -0.809017 409.74435 REMARK 350 BIOMT2 36 0.500000 0.809017 0.309017 -156.50848 REMARK 350 BIOMT3 36 0.809017 -0.309017 -0.500000 252.10804 REMARK 350 BIOMT1 37 0.500000 0.809017 -0.309017 -0.34865 REMARK 350 BIOMT2 37 0.809017 -0.309017 0.500000 0.56408 REMARK 350 BIOMT3 37 0.309017 -0.500000 -0.809017 505.55946 REMARK 350 BIOMT1 38 1.000000 0.000000 0.000000 0.00005 REMARK 350 BIOMT2 38 0.000000 -1.000000 0.000000 507.60009 REMARK 350 BIOMT3 38 0.000000 0.000000 -1.000000 505.34402 REMARK 350 BIOMT1 39 0.500000 -0.809017 -0.309017 410.30855 REMARK 350 BIOMT2 39 -0.809017 -0.309017 -0.500000 663.89301 REMARK 350 BIOMT3 39 0.309017 0.500000 -0.809017 251.75945 REMARK 350 BIOMT1 40 -0.309017 -0.500000 -0.809017 663.54445 REMARK 350 BIOMT2 40 -0.500000 0.809017 -0.309017 253.45134 REMARK 350 BIOMT3 40 0.809017 0.309017 -0.500000 95.25101 REMARK 350 BIOMT1 41 -0.500000 0.809017 -0.309017 253.45137 REMARK 350 BIOMT2 41 -0.809017 -0.309017 0.500000 411.22105 REMARK 350 BIOMT3 41 0.309017 0.500000 0.809017 -157.07245 REMARK 350 BIOMT1 42 0.500000 0.809017 0.309017 -156.50849 REMARK 350 BIOMT2 42 -0.809017 0.309017 0.500000 254.36402 REMARK 350 BIOMT3 42 0.309017 -0.500000 0.809017 96.72760 REMARK 350 BIOMT1 43 0.809017 -0.309017 0.500000 0.56400 REMARK 350 BIOMT2 43 -0.309017 0.500000 0.809017 0.91256 REMARK 350 BIOMT3 43 -0.500000 -0.809017 0.309017 506.82060 REMARK 350 BIOMT1 44 0.000000 -1.000000 0.000000 507.60001 REMARK 350 BIOMT2 44 0.000000 0.000000 1.000000 1.12798 REMARK 350 BIOMT3 44 -1.000000 0.000000 0.000000 506.47197 REMARK 350 BIOMT1 45 -0.809017 -0.309017 -0.500000 663.89300 REMARK 350 BIOMT2 45 -0.309017 -0.500000 0.809017 254.71257 REMARK 350 BIOMT3 45 -0.500000 0.809017 0.309017 96.16350 REMARK 350 BIOMT1 46 0.809017 -0.309017 -0.500000 253.23601 REMARK 350 BIOMT2 46 0.309017 -0.500000 0.809017 97.85558 REMARK 350 BIOMT3 46 -0.500000 -0.809017 -0.309017 662.98049 REMARK 350 BIOMT1 47 0.309017 -0.500000 -0.809017 506.68747 REMARK 350 BIOMT2 47 -0.500000 -0.809017 0.309017 507.94857 REMARK 350 BIOMT3 47 -0.809017 0.309017 -0.500000 505.90798 REMARK 350 BIOMT1 48 0.000000 0.000000 -1.000000 506.47201 REMARK 350 BIOMT2 48 -1.000000 0.000000 0.000000 507.59996 REMARK 350 BIOMT3 48 0.000000 1.000000 0.000000 -1.12802 REMARK 350 BIOMT1 49 0.309017 0.500000 -0.809017 252.88738 REMARK 350 BIOMT2 49 -0.500000 0.809017 0.309017 97.29152 REMARK 350 BIOMT3 49 0.809017 0.309017 0.500000 -157.42100 REMARK 350 BIOMT1 50 0.809017 0.309017 -0.500000 96.37893 REMARK 350 BIOMT2 50 0.309017 0.500000 0.809017 -155.94444 REMARK 350 BIOMT3 50 0.500000 -0.809017 0.309017 253.02063 REMARK 350 BIOMT1 51 -0.309017 0.500000 0.809017 0.91248 REMARK 350 BIOMT2 51 0.500000 0.809017 -0.309017 -0.34857 REMARK 350 BIOMT3 51 -0.809017 0.309017 -0.500000 505.90795 REMARK 350 BIOMT1 52 0.000000 0.000000 1.000000 1.12796 REMARK 350 BIOMT2 52 1.000000 0.000000 0.000000 0.00010 REMARK 350 BIOMT3 52 0.000000 1.000000 0.000000 -1.12806 REMARK 350 BIOMT1 53 -0.309017 -0.500000 0.809017 254.71260 REMARK 350 BIOMT2 53 0.500000 -0.809017 -0.309017 410.30856 REMARK 350 BIOMT3 53 0.809017 0.309017 0.500000 -157.42099 REMARK 350 BIOMT1 54 -0.809017 -0.309017 0.500000 411.22104 REMARK 350 BIOMT2 54 -0.309017 -0.500000 -0.809017 663.54447 REMARK 350 BIOMT3 54 0.500000 -0.809017 0.309017 253.02068 REMARK 350 BIOMT1 55 -0.809017 0.309017 0.500000 254.36394 REMARK 350 BIOMT2 55 -0.309017 0.500000 -0.809017 409.74441 REMARK 350 BIOMT3 55 -0.500000 -0.809017 -0.309017 662.98050 REMARK 350 BIOMT1 56 0.000000 -1.000000 0.000000 507.60007 REMARK 350 BIOMT2 56 0.000000 0.000000 -1.000000 506.47200 REMARK 350 BIOMT3 56 1.000000 0.000000 0.000000 -1.12793 REMARK 350 BIOMT1 57 -0.809017 -0.309017 -0.500000 663.89299 REMARK 350 BIOMT2 57 0.309017 0.500000 -0.809017 252.88737 REMARK 350 BIOMT3 57 0.500000 -0.809017 -0.309017 409.18054 REMARK 350 BIOMT1 58 -0.500000 0.809017 -0.309017 253.45132 REMARK 350 BIOMT2 58 0.809017 0.309017 -0.500000 96.37898 REMARK 350 BIOMT3 58 -0.309017 -0.500000 -0.809017 662.41648 REMARK 350 BIOMT1 59 0.500000 0.809017 0.309017 -156.50850 REMARK 350 BIOMT2 59 0.809017 -0.309017 -0.500000 253.23610 REMARK 350 BIOMT3 59 -0.309017 0.500000 -0.809017 408.61642 REMARK 350 BIOMT1 60 0.809017 -0.309017 0.500000 0.56407 REMARK 350 BIOMT2 60 0.309017 -0.500000 -0.809017 506.68752 REMARK 350 BIOMT3 60 0.500000 0.809017 -0.309017 -1.47657 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ILE A 1 REMARK 465 GLU A 2 REMARK 465 SER A 3 REMARK 465 ILE A 4 REMARK 465 ILE A 5 REMARK 465 LYS A 6 REMARK 465 THR A 7 REMARK 465 ALA A 8 REMARK 465 THR A 9 REMARK 465 ASP A 10 REMARK 465 THR A 11 REMARK 465 VAL A 12 REMARK 465 LYS A 13 REMARK 465 SER A 14 REMARK 465 GLU A 15 REMARK 465 ILE A 16 REMARK 465 ASN A 17 REMARK 465 ALA A 18 REMARK 465 GLU A 19 REMARK 465 LEU A 20 REMARK 465 GLY A 21 REMARK 465 VAL A 22 REMARK 465 VAL A 23 REMARK 465 PRO A 24 REMARK 465 SER A 25 REMARK 465 LEU A 26 REMARK 465 ASN A 27 REMARK 465 ALA A 28 REMARK 465 VAL A 29 REMARK 465 GLU A 30 REMARK 465 THR A 31 REMARK 465 GLY A 32 REMARK 465 ALA A 33 REMARK 465 THR A 34 REMARK 465 SER A 35 REMARK 465 ASN A 36 REMARK 465 THR A 37 REMARK 465 GLU A 38 REMARK 465 PRO A 39 REMARK 465 GLU A 40 REMARK 465 GLU A 41 REMARK 465 ASP A 78 REMARK 465 HIS A 79 REMARK 465 THR A 80 REMARK 465 SER A 81 REMARK 465 SER A 82 REMARK 465 ALA A 83 REMARK 465 ALA A 84 REMARK 465 GLN A 85 REMARK 465 ALA A 86 REMARK 465 ASP A 87 REMARK 465 ALA A 126 REMARK 465 VAL A 127 REMARK 465 ASN A 128 REMARK 465 GLY A 129 REMARK 465 SER A 130 REMARK 465 GLY A 131 REMARK 465 ASN A 132 REMARK 465 ASN A 133 REMARK 465 THR A 134 REMARK 465 TYR A 135 REMARK 465 VAL A 136 REMARK 465 GLY A 137 REMARK 465 LYS A 268 REMARK 465 GLY A 269 REMARK 465 LYS A 270 REMARK 465 GLU A 271 REMARK 465 ARG A 272 REMARK 465 ALA A 273 REMARK 465 PRO A 274 REMARK 465 ASN A 275 REMARK 465 ALA A 276 REMARK 465 LEU A 277 REMARK 465 ASN A 278 REMARK 465 ALA A 279 REMARK 465 ILE A 280 REMARK 465 ILE A 281 REMARK 465 GLY A 282 REMARK 465 ASN A 283 REMARK 465 ARG A 284 REMARK 465 ASP A 285 REMARK 465 SER A 286 REMARK 465 VAL A 287 REMARK 465 LYS A 288 REMARK 465 THR A 289 REMARK 465 MET A 290 REMARK 465 PRO A 291 REMARK 465 HIS A 292 REMARK 465 ASN A 293 REMARK 465 ILE A 294 REMARK 465 VAL A 295 REMARK 465 SER B 1 REMARK 465 PRO B 2 REMARK 465 SER B 3 REMARK 465 ALA B 4 REMARK 465 GLU B 5 REMARK 465 ALA B 6 REMARK 465 CYS B 7 REMARK 465 GLY B 8 REMARK 465 TYR B 9 REMARK 465 SER B 10 REMARK 465 ASP B 11 REMARK 465 ARG B 12 REMARK 465 VAL B 13 REMARK 465 LEU B 14 REMARK 465 GLN B 15 REMARK 465 THR B 247 REMARK 465 GLN B 248 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG SER B 21 O ARG B 62 2.03 REMARK 500 OG SER A 70 OH TYR C 246 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 64 24.30 -145.87 REMARK 500 ARG A 98 49.46 -93.45 REMARK 500 ILE A 217 -57.02 -125.69 REMARK 500 ALA A 250 76.51 53.95 REMARK 500 THR B 25 61.15 62.33 REMARK 500 ALA B 29 -135.93 54.86 REMARK 500 TYR B 35 -63.38 -105.96 REMARK 500 ASN B 40 -0.15 69.39 REMARK 500 LEU B 42 77.17 53.00 REMARK 500 LYS B 52 78.77 58.21 REMARK 500 GLN B 55 71.25 38.18 REMARK 500 PHE B 63 64.00 75.69 REMARK 500 ASN B 184 28.44 -142.15 REMARK 500 ARG B 203 15.10 -140.12 REMARK 500 VAL B 226 75.71 49.02 REMARK 500 VAL C 77 -66.20 -100.28 REMARK 500 ASP C 78 14.62 -142.98 REMARK 500 ASN C 96 64.47 -100.73 REMARK 500 TYR C 175 67.21 60.41 REMARK 500 ASP C 208 33.12 -95.03 REMARK 500 LEU C 226 72.67 62.75 REMARK 500 ALA C 241 78.12 -107.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-9631 RELATED DB: EMDB REMARK 900 THE STRUCTURE OF ICAM-5 TRIGGERED ENTEROVIRUS D68 VIRUS A-PARTICLE DBREF1 6AJ2 A 1 295 UNP A0A097F8Q2_9ENTO DBREF2 6AJ2 A A0A097F8Q2 565 859 DBREF1 6AJ2 B 1 248 UNP A0A0A7X639_9ENTO DBREF2 6AJ2 B A0A0A7X639 70 317 DBREF 6AJ2 C 1 247 PDB 6AJ2 6AJ2 1 247 SEQRES 1 A 295 ILE GLU SER ILE ILE LYS THR ALA THR ASP THR VAL LYS SEQRES 2 A 295 SER GLU ILE ASN ALA GLU LEU GLY VAL VAL PRO SER LEU SEQRES 3 A 295 ASN ALA VAL GLU THR GLY ALA THR SER ASN THR GLU PRO SEQRES 4 A 295 GLU GLU ALA ILE GLN THR ARG THR VAL ILE ASN GLN HIS SEQRES 5 A 295 GLY VAL SER GLU THR LEU VAL GLU ASN PHE LEU SER ARG SEQRES 6 A 295 ALA ALA LEU VAL SER LYS ARG SER PHE GLU TYR LYS ASP SEQRES 7 A 295 HIS THR SER SER ALA ALA GLN ALA ASP LYS ASN PHE PHE SEQRES 8 A 295 LYS TRP THR ILE ASN THR ARG SER PHE VAL GLN LEU ARG SEQRES 9 A 295 ARG LYS LEU GLU LEU PHE THR TYR LEU ARG PHE ASP ALA SEQRES 10 A 295 GLU ILE THR ILE LEU THR THR VAL ALA VAL ASN GLY SER SEQRES 11 A 295 GLY ASN ASN THR TYR VAL GLY LEU PRO ASP LEU THR LEU SEQRES 12 A 295 GLN ALA MET PHE VAL PRO THR GLY ALA LEU THR PRO GLU SEQRES 13 A 295 LYS GLN ASP SER PHE HIS TRP GLN SER GLY SER ASN ALA SEQRES 14 A 295 SER VAL PHE PHE LYS ILE SER ASP PRO PRO ALA ARG ILE SEQRES 15 A 295 THR ILE PRO PHE MET CYS ILE ASN SER ALA TYR SER VAL SEQRES 16 A 295 PHE TYR ASP GLY PHE ALA GLY PHE GLU LYS ASN GLY LEU SEQRES 17 A 295 TYR GLY ILE ASN PRO ALA ASP THR ILE GLY ASN LEU CYS SEQRES 18 A 295 VAL ARG ILE VAL ASN GLU HIS GLN PRO VAL GLY PHE THR SEQRES 19 A 295 VAL THR VAL ARG VAL TYR MET LYS PRO LYS HIS ILE LYS SEQRES 20 A 295 ALA TRP ALA PRO ARG PRO PRO ARG THR LEU PRO TYR MET SEQRES 21 A 295 SER ILE ALA ASN ALA ASN TYR LYS GLY LYS GLU ARG ALA SEQRES 22 A 295 PRO ASN ALA LEU ASN ALA ILE ILE GLY ASN ARG ASP SER SEQRES 23 A 295 VAL LYS THR MET PRO HIS ASN ILE VAL SEQRES 1 B 248 SER PRO SER ALA GLU ALA CYS GLY TYR SER ASP ARG VAL SEQRES 2 B 248 LEU GLN LEU LYS LEU GLY ASN SER ALA ILE VAL THR GLN SEQRES 3 B 248 GLU ALA ALA ASN TYR CYS CYS ALA TYR GLY GLU TRP PRO SEQRES 4 B 248 ASN TYR LEU PRO ASP HIS GLU ALA VAL ALA ILE ASP LYS SEQRES 5 B 248 PRO THR GLN PRO GLU THR ALA THR ASP ARG PHE TYR THR SEQRES 6 B 248 LEU LYS SER VAL LYS TRP GLU THR GLY SER THR GLY TRP SEQRES 7 B 248 TRP TRP LYS LEU PRO ASP ALA LEU ASN ASN ILE GLY MET SEQRES 8 B 248 PHE GLY GLN ASN VAL GLN HIS HIS TYR LEU TYR ARG SER SEQRES 9 B 248 GLY PHE LEU ILE HIS VAL GLN CYS ASN ALA THR LYS PHE SEQRES 10 B 248 HIS GLN GLY ALA LEU LEU VAL VAL ALA ILE PRO GLU HIS SEQRES 11 B 248 GLN ARG GLY ALA HIS ASN THR ASN THR SER PRO GLY PHE SEQRES 12 B 248 ASP ASP ILE MET LYS GLY GLU GLU GLY GLY THR PHE ASN SEQRES 13 B 248 HIS PRO TYR VAL LEU ASP ASP GLY THR SER LEU ALA CYS SEQRES 14 B 248 ALA THR ILE PHE PRO HIS GLN TRP ILE ASN LEU ARG THR SEQRES 15 B 248 ASN ASN SER ALA THR ILE VAL LEU PRO TRP MET ASN ALA SEQRES 16 B 248 ALA PRO MET ASP PHE PRO LEU ARG HIS ASN GLN TRP THR SEQRES 17 B 248 LEU ALA ILE ILE PRO VAL VAL PRO LEU GLY THR ARG THR SEQRES 18 B 248 THR SER SER MET VAL PRO ILE THR VAL SER ILE ALA PRO SEQRES 19 B 248 MET CYS CYS GLU PHE ASN GLY LEU ARG HIS ALA ILE THR SEQRES 20 B 248 GLN SEQRES 1 C 247 GLY VAL PRO THR TYR LEU LEU PRO GLY SER GLY GLN PHE SEQRES 2 C 247 LEU THR THR ASP ASP HIS SER SER ALA PRO ALA LEU PRO SEQRES 3 C 247 CYS PHE ASN PRO THR PRO GLU MET HIS ILE PRO GLY GLN SEQRES 4 C 247 VAL ARG ASN MET LEU GLU VAL VAL GLN VAL GLU SER MET SEQRES 5 C 247 MET GLU ILE ASN ASN THR GLU SER ALA VAL GLY MET GLU SEQRES 6 C 247 ARG LEU LYS VAL ASP ILE SER ALA LEU THR ASP VAL ASP SEQRES 7 C 247 GLN LEU LEU PHE ASN ILE PRO LEU ASP ILE GLN LEU ASP SEQRES 8 C 247 GLY PRO LEU ARG ASN THR LEU VAL GLY ASN ILE SER ARG SEQRES 9 C 247 TYR TYR THR HIS TRP SER GLY SER LEU GLU MET THR PHE SEQRES 10 C 247 MET PHE CYS GLY SER PHE MET ALA THR GLY LYS LEU ILE SEQRES 11 C 247 LEU CYS TYR THR PRO PRO GLY GLY SER CYS PRO THR THR SEQRES 12 C 247 ARG GLU THR ALA MET LEU GLY THR HIS ILE VAL TRP ASP SEQRES 13 C 247 PHE GLY LEU GLN SER SER VAL THR LEU ILE ILE PRO TRP SEQRES 14 C 247 ILE SER GLY SER HIS TYR ARG MET PHE ASN ASN ASP ALA SEQRES 15 C 247 LYS SER THR ASN ALA ASN VAL GLY TYR VAL THR CYS PHE SEQRES 16 C 247 MET GLN THR ASN LEU ILE VAL PRO SER GLU SER SER ASP SEQRES 17 C 247 THR CYS SER LEU ILE GLY PHE ILE ALA ALA LYS ASP ASP SEQRES 18 C 247 PHE SER LEU ARG LEU MET ARG ASP SER PRO ASP ILE GLY SEQRES 19 C 247 GLN LEU ASP HIS LEU HIS ALA ALA GLU ALA ALA TYR GLN HELIX 1 AA1 VAL A 54 LEU A 58 5 5 HELIX 2 AA2 PHE A 100 GLU A 108 1 9 HELIX 3 AA3 ASN A 212 THR A 216 5 5 HELIX 4 AA4 LYS B 81 LEU B 86 1 6 HELIX 5 AA5 ILE B 89 GLN B 97 1 9 HELIX 6 AA6 SER B 166 PHE B 173 5 8 HELIX 7 AA7 MET C 43 GLN C 48 1 6 HELIX 8 AA8 GLY C 63 LYS C 68 5 6 HELIX 9 AA9 LEU C 98 SER C 103 1 6 HELIX 10 AB1 ARG C 144 LEU C 149 1 6 SHEET 1 AA1 4 LEU A 68 TYR A 76 0 SHEET 2 AA1 4 PHE A 233 MET A 241 -1 O VAL A 235 N PHE A 74 SHEET 3 AA1 4 ILE A 119 THR A 124 -1 N THR A 124 O THR A 236 SHEET 4 AA1 4 ALA A 180 ILE A 182 -1 O ILE A 182 N ILE A 119 SHEET 1 AA2 4 PHE A 91 THR A 94 0 SHEET 2 AA2 4 ASN A 219 ILE A 224 -1 O VAL A 222 N PHE A 91 SHEET 3 AA2 4 LEU A 143 VAL A 148 -1 N GLN A 144 O ARG A 223 SHEET 4 AA2 4 PHE A 172 PHE A 173 -1 O PHE A 173 N LEU A 143 SHEET 1 AA3 4 TYR A 193 SER A 194 0 SHEET 2 AA3 4 TYR A 112 ASP A 116 -1 N LEU A 113 O TYR A 193 SHEET 3 AA3 4 LYS A 244 TRP A 249 -1 O TRP A 249 N TYR A 112 SHEET 4 AA3 4 GLN C 39 VAL C 40 -1 O VAL C 40 N ALA A 248 SHEET 1 AA4 2 LYS B 17 LEU B 18 0 SHEET 2 AA4 2 SER B 21 ALA B 22 -1 N SER B 21 O LEU B 18 SHEET 1 AA5 5 CYS B 32 CYS B 33 0 SHEET 2 AA5 5 SER B 185 LEU B 190 1 O VAL B 189 N CYS B 32 SHEET 3 AA5 5 PHE B 106 CYS B 112 -1 N VAL B 110 O ALA B 186 SHEET 4 AA5 5 PRO B 227 PRO B 234 -1 O SER B 231 N HIS B 109 SHEET 5 AA5 5 TYR B 64 THR B 65 -1 N TYR B 64 O ILE B 232 SHEET 1 AA6 5 CYS B 32 CYS B 33 0 SHEET 2 AA6 5 SER B 185 LEU B 190 1 O VAL B 189 N CYS B 32 SHEET 3 AA6 5 PHE B 106 CYS B 112 -1 N VAL B 110 O ALA B 186 SHEET 4 AA6 5 PRO B 227 PRO B 234 -1 O SER B 231 N HIS B 109 SHEET 5 AA6 5 VAL B 69 LYS B 70 -1 N VAL B 69 O ILE B 228 SHEET 1 AA7 4 TRP B 78 TRP B 79 0 SHEET 2 AA7 4 TRP B 207 VAL B 215 -1 O ILE B 211 N TRP B 78 SHEET 3 AA7 4 ALA B 121 PRO B 128 -1 N VAL B 125 O ALA B 210 SHEET 4 AA7 4 HIS B 175 GLN B 176 -1 O GLN B 176 N VAL B 124 SHEET 1 AA8 2 TYR B 102 ARG B 103 0 SHEET 2 AA8 2 GLU B 238 PHE B 239 -1 O GLU B 238 N ARG B 103 SHEET 1 AA9 4 SER C 51 MET C 52 0 SHEET 2 AA9 4 LEU C 212 ALA C 218 -1 O ILE C 216 N SER C 51 SHEET 3 AA9 4 HIS C 108 PHE C 119 -1 N THR C 116 O PHE C 215 SHEET 4 AA9 4 SER C 162 ILE C 170 -1 O LEU C 165 N MET C 115 SHEET 1 AB1 4 SER C 51 MET C 52 0 SHEET 2 AB1 4 LEU C 212 ALA C 218 -1 O ILE C 216 N SER C 51 SHEET 3 AB1 4 HIS C 108 PHE C 119 -1 N THR C 116 O PHE C 215 SHEET 4 AB1 4 SER C 223 ARG C 225 -1 O SER C 223 N SER C 110 SHEET 1 AB2 4 LEU C 80 PRO C 85 0 SHEET 2 AB2 4 TYR C 191 MET C 196 -1 O CYS C 194 N LEU C 81 SHEET 3 AB2 4 LYS C 128 THR C 134 -1 N CYS C 132 O THR C 193 SHEET 4 AB2 4 HIS C 152 ASP C 156 -1 O TRP C 155 N LEU C 129 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.001970 0.000000 0.000000 0.00000 SCALE2 0.000000 0.001970 0.000000 0.00000 SCALE3 0.000000 0.000000 0.001970 0.00000