HEADER MEMBRANE PROTEIN, HYDROLASE 27-AUG-18 6AJI TITLE CRYSTAL STRUCTURE OF MYCOLIC ACID TRANSPORTER MMPL3 FROM MYCOBACTERIUM TITLE 2 SMEGMATIS COMPLEXED WITH RIMONABANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: DRUG EXPORTERS OF THE RND SUPERFAMILY-LIKE PROTEIN, COMPND 3 ENDOLYSIN; COMPND 4 CHAIN: A; COMPND 5 SYNONYM: MMPL3 TRANSPORTER,LYSIS PROTEIN,LYSOZYME,MURAMIDASE; COMPND 6 EC: 3.2.1.17; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM SMEGMATIS (STRAIN ATCC 700084 / SOURCE 3 MC(2)155), ENTEROBACTERIA PHAGE T4; SOURCE 4 ORGANISM_COMMON: BACTERIOPHAGE T4; SOURCE 5 ORGANISM_TAXID: 246196, 10665; SOURCE 6 STRAIN: ATCC 700084 / MC(2)155; SOURCE 7 GENE: MMPL3, MSMEI_0243, E, T4TP126; SOURCE 8 EXPRESSION_SYSTEM: MYCOBACTERIUM SMEGMATIS STR. MC2 155; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 246196 KEYWDS MEMBRANE PROTEIN, TRANSPORTER, RND FAMILY, CELL WALL BIOSYNTHESIS, KEYWDS 2 DRUG TARGET, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR B.ZHANG,J.LI,X.L.YANG,L.J.WU,H.T.YANG,Z.H.RAO REVDAT 3 22-NOV-23 6AJI 1 REMARK REVDAT 2 13-FEB-19 6AJI 1 JRNL REVDAT 1 26-DEC-18 6AJI 0 JRNL AUTH B.ZHANG,J.LI,X.YANG,L.WU,J.ZHANG,Y.YANG,Y.ZHAO,L.ZHANG, JRNL AUTH 2 X.YANG,X.YANG,X.CHENG,Z.LIU,B.JIANG,H.JIANG,L.W.GUDDAT, JRNL AUTH 3 H.YANG,Z.RAO JRNL TITL CRYSTAL STRUCTURES OF MEMBRANE TRANSPORTER MMPL3, AN ANTI-TB JRNL TITL 2 DRUG TARGET. JRNL REF CELL V. 176 636 2019 JRNL REFN ISSN 1097-4172 JRNL PMID 30682372 JRNL DOI 10.1016/J.CELL.2019.01.003 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.81 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 39121 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.231 REMARK 3 R VALUE (WORKING SET) : 0.230 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1994 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.8173 - 6.9812 0.99 2858 139 0.2339 0.2200 REMARK 3 2 6.9812 - 5.5445 1.00 2733 137 0.2341 0.2496 REMARK 3 3 5.5445 - 4.8446 1.00 2685 177 0.1877 0.2154 REMARK 3 4 4.8446 - 4.4021 1.00 2677 150 0.1774 0.2001 REMARK 3 5 4.4021 - 4.0868 1.00 2678 150 0.1953 0.2478 REMARK 3 6 4.0868 - 3.8460 0.99 2656 138 0.2221 0.2533 REMARK 3 7 3.8460 - 3.6534 0.92 2436 128 0.2990 0.3069 REMARK 3 8 3.6534 - 3.4945 0.95 2552 123 0.2747 0.3950 REMARK 3 9 3.4945 - 3.3600 1.00 2631 157 0.2502 0.2821 REMARK 3 10 3.3600 - 3.2441 1.00 2626 165 0.2505 0.3201 REMARK 3 11 3.2441 - 3.1427 1.00 2665 119 0.2565 0.3335 REMARK 3 12 3.1427 - 3.0529 1.00 2657 139 0.2659 0.3115 REMARK 3 13 3.0529 - 2.9725 1.00 2620 158 0.2959 0.3845 REMARK 3 14 2.9725 - 2.9000 1.00 2653 114 0.3264 0.3862 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.390 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.460 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 91.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 102.5 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 7015 REMARK 3 ANGLE : 0.987 9524 REMARK 3 CHIRALITY : 0.054 1093 REMARK 3 PLANARITY : 0.006 1191 REMARK 3 DIHEDRAL : 17.050 4297 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 584 THROUGH 751 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.6054 10.8539 -13.3898 REMARK 3 T TENSOR REMARK 3 T11: 1.0190 T22: 0.8958 REMARK 3 T33: 1.0206 T12: 0.1604 REMARK 3 T13: 0.1616 T23: 0.2192 REMARK 3 L TENSOR REMARK 3 L11: 0.1651 L22: 0.4724 REMARK 3 L33: 1.6465 L12: 0.3033 REMARK 3 L13: -0.2393 L23: -0.5226 REMARK 3 S TENSOR REMARK 3 S11: 0.2054 S12: 0.1094 S13: 0.3910 REMARK 3 S21: 0.6206 S22: 0.4408 S23: 0.7648 REMARK 3 S31: -0.5602 S32: -0.5673 S33: -0.4746 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 752 THROUGH 928 ) REMARK 3 ORIGIN FOR THE GROUP (A): 50.0857 24.9022 -59.1789 REMARK 3 T TENSOR REMARK 3 T11: 0.7591 T22: 0.7693 REMARK 3 T33: 0.8247 T12: 0.0714 REMARK 3 T13: -0.0248 T23: 0.0057 REMARK 3 L TENSOR REMARK 3 L11: 4.3275 L22: 1.6723 REMARK 3 L33: 1.8594 L12: -0.5758 REMARK 3 L13: -0.4151 L23: -0.0722 REMARK 3 S TENSOR REMARK 3 S11: 0.1491 S12: -0.3895 S13: -0.1301 REMARK 3 S21: -0.1219 S22: -0.1081 S23: -0.2535 REMARK 3 S31: 0.0797 S32: 0.1949 S33: -0.0503 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -2 THROUGH 470 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.8221 -13.0960 -5.8484 REMARK 3 T TENSOR REMARK 3 T11: 0.5656 T22: 0.6199 REMARK 3 T33: 0.6949 T12: -0.0014 REMARK 3 T13: 0.0098 T23: -0.0140 REMARK 3 L TENSOR REMARK 3 L11: 0.9831 L22: 2.1636 REMARK 3 L33: 3.4620 L12: 0.3701 REMARK 3 L13: -0.6426 L23: -1.9229 REMARK 3 S TENSOR REMARK 3 S11: -0.0194 S12: 0.0192 S13: 0.1319 REMARK 3 S21: 0.0091 S22: 0.1763 S23: 0.2699 REMARK 3 S31: 0.1572 S32: -0.3613 S33: -0.1775 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 471 THROUGH 583 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.8674 -6.0218 18.9819 REMARK 3 T TENSOR REMARK 3 T11: 0.9386 T22: 0.7772 REMARK 3 T33: 0.8190 T12: -0.0243 REMARK 3 T13: -0.0592 T23: -0.1534 REMARK 3 L TENSOR REMARK 3 L11: 1.2757 L22: 3.1103 REMARK 3 L33: 2.1954 L12: -0.2183 REMARK 3 L13: -0.5235 L23: -1.4731 REMARK 3 S TENSOR REMARK 3 S11: -0.3036 S12: -0.5181 S13: -0.0505 REMARK 3 S21: 1.3246 S22: 0.3932 S23: -0.1279 REMARK 3 S31: -0.5189 S32: -0.1375 S33: -0.1395 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6AJI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 09-OCT-18. REMARK 100 THE DEPOSITION ID IS D_1300008866. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-DEC-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0-7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39501 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 99.852 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05700 REMARK 200 FOR THE DATA SET : 15.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 0.70000 REMARK 200 R SYM FOR SHELL (I) : 0.70000 REMARK 200 FOR SHELL : 1.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 6AJF REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10%-20% (V/V) POLYETHYLENE GLYCOL REMARK 280 MONOMETHYL ETHER 350 (PEGMME 350), 50 MM ADA (N-(2-ACETAMIDO) REMARK 280 IMINODIACETIC ACID) (PH 6.0-7.0), 7.5%-17.5% (V/V) POLYETHYLENE REMARK 280 GLYCOL 2000 (PEG 2000), VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 43.84800 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 70.91650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 70.29900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 70.91650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.84800 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 70.29900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37260 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 1.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -12 REMARK 465 PRO A -11 REMARK 465 GLU A -10 REMARK 465 VAL A -9 REMARK 465 VAL A -8 REMARK 465 GLY A -7 REMARK 465 SER A -6 REMARK 465 TYR A -5 REMARK 465 PHE A -4 REMARK 465 GLN A -3 REMARK 465 VAL A 350 REMARK 465 THR A 351 REMARK 465 THR A 352 REMARK 465 LEU A 353 REMARK 465 LEU A 354 REMARK 465 LYS A 355 REMARK 465 ILE A 356 REMARK 465 PRO A 357 REMARK 465 PHE A 358 REMARK 465 LEU A 359 REMARK 465 ALA A 360 REMARK 465 ASN A 361 REMARK 465 TRP A 362 REMARK 465 GLN A 363 REMARK 465 PHE A 364 REMARK 465 SER A 365 REMARK 465 ARG A 366 REMARK 465 ARG A 367 REMARK 465 ILE A 368 REMARK 465 ILE A 369 REMARK 465 ASP A 370 REMARK 465 TRP A 371 REMARK 465 PHE A 372 REMARK 465 ALA A 373 REMARK 465 GLU A 374 REMARK 465 LYS A 375 REMARK 465 THR A 376 REMARK 465 GLN A 377 REMARK 465 LYS A 378 REMARK 465 THR A 379 REMARK 465 LYS A 380 REMARK 465 THR A 381 REMARK 465 ARG A 382 REMARK 465 GLU A 383 REMARK 465 GLU A 384 REMARK 465 VAL A 385 REMARK 465 GLU A 386 REMARK 465 ARG A 387 REMARK 465 GLY A 388 REMARK 465 PHE A 389 REMARK 465 TRP A 390 REMARK 465 GLY A 391 REMARK 465 ARG A 392 REMARK 465 LEU A 393 REMARK 465 VAL A 394 REMARK 465 ASN A 395 REMARK 465 VAL A 396 REMARK 465 VAL A 397 REMARK 465 MET A 398 REMARK 465 LYS A 399 REMARK 465 ARG A 400 REMARK 465 TRP A 741 REMARK 465 MET A 742 REMARK 465 LYS A 743 REMARK 465 ARG A 744 REMARK 465 VAL A 745 REMARK 465 GLN A 746 REMARK 465 GLU A 747 REMARK 465 HIS A 929 REMARK 465 HIS A 930 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 266 OD1 ASP A 346 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 414 CA - CB - CG ANGL. DEV. = 15.7 DEGREES REMARK 500 LEU A 598 CB - CG - CD2 ANGL. DEV. = -10.9 DEGREES REMARK 500 LEU A 840 CA - CB - CG ANGL. DEV. = 15.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A -1 -2.44 -140.90 REMARK 500 ASP A 77 29.22 49.80 REMARK 500 HIS A 101 46.45 -145.08 REMARK 500 PHE A 241 -7.87 -56.25 REMARK 500 THR A 285 -72.62 -116.32 REMARK 500 THR A 332 -78.65 -119.21 REMARK 500 PRO A 407 11.32 -69.00 REMARK 500 GLU A 464 1.76 -67.52 REMARK 500 ASN A 492 24.75 50.00 REMARK 500 LYS A 509 35.61 70.22 REMARK 500 PRO A 539 -174.60 -53.36 REMARK 500 THR A 664 -79.65 -70.17 REMARK 500 ALA A 665 -52.40 -25.38 REMARK 500 THR A 717 -69.39 -128.56 REMARK 500 LEU A 730 -72.02 -43.07 REMARK 500 ILE A 766 141.49 -36.58 REMARK 500 ASN A 804 48.72 30.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue AY6 A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue L6T A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue L6T A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue L6T A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MHA A 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MHA A 1006 DBREF 6AJI A 1 748 UNP I7G2R2 I7G2R2_MYCS2 1 748 DBREF 6AJI A 751 910 UNP D9IEF7 D9IEF7_BPT4 2 161 SEQADV 6AJI MET A -12 UNP I7G2R2 EXPRESSION TAG SEQADV 6AJI PRO A -11 UNP I7G2R2 EXPRESSION TAG SEQADV 6AJI GLU A -10 UNP I7G2R2 EXPRESSION TAG SEQADV 6AJI VAL A -9 UNP I7G2R2 EXPRESSION TAG SEQADV 6AJI VAL A -8 UNP I7G2R2 EXPRESSION TAG SEQADV 6AJI GLY A -7 UNP I7G2R2 EXPRESSION TAG SEQADV 6AJI SER A -6 UNP I7G2R2 EXPRESSION TAG SEQADV 6AJI TYR A -5 UNP I7G2R2 EXPRESSION TAG SEQADV 6AJI PHE A -4 UNP I7G2R2 EXPRESSION TAG SEQADV 6AJI GLN A -3 UNP I7G2R2 EXPRESSION TAG SEQADV 6AJI SER A -2 UNP I7G2R2 EXPRESSION TAG SEQADV 6AJI ASN A -1 UNP I7G2R2 EXPRESSION TAG SEQADV 6AJI ALA A 0 UNP I7G2R2 EXPRESSION TAG SEQADV 6AJI GLU A 749 UNP I7G2R2 LINKER SEQADV 6AJI PHE A 750 UNP I7G2R2 LINKER SEQADV 6AJI THR A 803 UNP D9IEF7 CYS 54 ENGINEERED MUTATION SEQADV 6AJI ALA A 846 UNP D9IEF7 CYS 97 ENGINEERED MUTATION SEQADV 6AJI GLU A 911 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJI PHE A 912 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJI HIS A 913 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJI LEU A 914 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJI GLY A 915 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJI GLY A 916 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJI ILE A 917 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJI LYS A 918 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJI ALA A 919 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJI PHE A 920 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJI HIS A 921 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJI HIS A 922 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJI HIS A 923 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJI HIS A 924 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJI HIS A 925 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJI HIS A 926 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJI HIS A 927 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJI HIS A 928 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJI HIS A 929 UNP D9IEF7 EXPRESSION TAG SEQADV 6AJI HIS A 930 UNP D9IEF7 EXPRESSION TAG SEQRES 1 A 943 MET PRO GLU VAL VAL GLY SER TYR PHE GLN SER ASN ALA SEQRES 2 A 943 MET PHE ALA TRP TRP GLY ARG THR VAL TYR GLN PHE ARG SEQRES 3 A 943 TYR ILE VAL ILE GLY VAL MET VAL ALA LEU CYS LEU GLY SEQRES 4 A 943 GLY GLY VAL TYR GLY ILE SER LEU GLY ASN HIS VAL THR SEQRES 5 A 943 GLN SER GLY PHE TYR ASP GLU GLY SER GLN SER VAL ALA SEQRES 6 A 943 ALA SER LEU ILE GLY ASP GLU VAL TYR GLY ARG ASP ARG SEQRES 7 A 943 THR SER HIS VAL VAL ALA ILE LEU THR PRO PRO ASP ASP SEQRES 8 A 943 LYS LYS VAL THR ASP LYS ALA TRP GLN LYS LYS VAL THR SEQRES 9 A 943 GLU GLU LEU ASP GLN VAL VAL LYS ASP HIS GLU ASP GLN SEQRES 10 A 943 ILE VAL GLY TRP VAL GLY TRP LEU LYS ALA PRO ASP THR SEQRES 11 A 943 THR ASP PRO THR VAL SER ALA MET LYS THR GLN ASP LEU SEQRES 12 A 943 ARG HIS THR PHE ILE SER ILE PRO LEU GLN GLY ASP ASP SEQRES 13 A 943 ASP ASP GLU ILE LEU LYS ASN TYR GLN VAL VAL GLU PRO SEQRES 14 A 943 GLU LEU GLN GLN VAL ASN GLY GLY ASP ILE ARG LEU ALA SEQRES 15 A 943 GLY LEU ASN PRO LEU ALA SER GLU LEU THR GLY THR ILE SEQRES 16 A 943 GLY GLU ASP GLN LYS ARG ALA GLU VAL ALA ALA ILE PRO SEQRES 17 A 943 LEU VAL ALA VAL VAL LEU PHE PHE VAL PHE GLY THR VAL SEQRES 18 A 943 ILE ALA ALA ALA LEU PRO ALA ILE ILE GLY GLY LEU ALA SEQRES 19 A 943 ILE ALA GLY ALA LEU GLY ILE MET ARG LEU VAL ALA GLU SEQRES 20 A 943 PHE THR PRO VAL HIS PHE PHE ALA GLN PRO VAL VAL THR SEQRES 21 A 943 LEU ILE GLY LEU GLY ILE ALA ILE ASP TYR GLY LEU PHE SEQRES 22 A 943 ILE VAL SER ARG PHE ARG GLU GLU ILE ALA GLU GLY TYR SEQRES 23 A 943 ASP THR GLU ALA ALA VAL ARG ARG THR VAL MET THR SER SEQRES 24 A 943 GLY ARG THR VAL VAL PHE SER ALA VAL ILE ILE VAL ALA SEQRES 25 A 943 SER SER VAL PRO LEU LEU LEU PHE PRO GLN GLY PHE LEU SEQRES 26 A 943 LYS SER ILE THR TYR ALA ILE ILE ALA SER VAL MET LEU SEQRES 27 A 943 ALA ALA ILE LEU SER ILE THR VAL LEU ALA ALA ALA LEU SEQRES 28 A 943 ALA ILE LEU GLY PRO ARG VAL ASP ALA LEU GLY VAL THR SEQRES 29 A 943 THR LEU LEU LYS ILE PRO PHE LEU ALA ASN TRP GLN PHE SEQRES 30 A 943 SER ARG ARG ILE ILE ASP TRP PHE ALA GLU LYS THR GLN SEQRES 31 A 943 LYS THR LYS THR ARG GLU GLU VAL GLU ARG GLY PHE TRP SEQRES 32 A 943 GLY ARG LEU VAL ASN VAL VAL MET LYS ARG PRO ILE ALA SEQRES 33 A 943 PHE ALA ALA PRO ILE LEU VAL VAL MET VAL LEU LEU ILE SEQRES 34 A 943 ILE PRO LEU GLY GLN LEU SER LEU GLY GLY ILE SER GLU SEQRES 35 A 943 LYS TYR LEU PRO PRO ASP ASN ALA VAL ARG GLN SER GLN SEQRES 36 A 943 GLU GLN PHE ASP LYS LEU PHE PRO GLY PHE ARG THR GLU SEQRES 37 A 943 PRO LEU THR LEU VAL MET LYS ARG GLU ASP GLY GLU PRO SEQRES 38 A 943 ILE THR ASP ALA GLN ILE ALA ASP MET ARG ALA LYS ALA SEQRES 39 A 943 LEU THR VAL SER GLY PHE THR ASP PRO ASP ASN ASP PRO SEQRES 40 A 943 GLU LYS MET TRP LYS GLU ARG PRO ALA ASN ASP SER GLY SEQRES 41 A 943 SER LYS ASP PRO SER VAL ARG VAL ILE GLN ASN GLY LEU SEQRES 42 A 943 GLU ASN ARG ASN ASP ALA ALA LYS LYS ILE ASP GLU LEU SEQRES 43 A 943 ARG ALA LEU GLN PRO PRO HIS GLY ILE GLU VAL PHE VAL SEQRES 44 A 943 GLY GLY THR PRO ALA LEU GLU GLN ASP SER ILE HIS SER SEQRES 45 A 943 LEU PHE ASP LYS LEU PRO LEU MET ALA LEU ILE LEU ILE SEQRES 46 A 943 VAL THR THR THR VAL LEU MET PHE LEU ALA PHE GLY SER SEQRES 47 A 943 VAL VAL LEU PRO ILE LYS ALA ALA LEU MET SER ALA LEU SEQRES 48 A 943 THR LEU GLY SER THR MET GLY ILE LEU THR TRP MET PHE SEQRES 49 A 943 VAL ASP GLY HIS GLY SER GLY LEU MET ASN TYR THR PRO SEQRES 50 A 943 GLN PRO LEU MET ALA PRO MET ILE GLY LEU ILE ILE ALA SEQRES 51 A 943 VAL ILE TRP GLY LEU SER THR ASP TYR GLU VAL PHE LEU SEQRES 52 A 943 VAL SER ARG MET VAL GLU ALA ARG GLU ARG GLY MET SER SEQRES 53 A 943 THR ALA GLU ALA ILE ARG ILE GLY THR ALA THR THR GLY SEQRES 54 A 943 ARG LEU ILE THR GLY ALA ALA LEU ILE LEU ALA VAL VAL SEQRES 55 A 943 ALA GLY ALA PHE VAL PHE SER ASP LEU VAL MET MET LYS SEQRES 56 A 943 TYR LEU ALA PHE GLY LEU LEU ILE ALA LEU LEU LEU ASP SEQRES 57 A 943 ALA THR ILE ILE ARG MET PHE LEU VAL PRO ALA VAL MET SEQRES 58 A 943 LYS LEU LEU GLY ASP ASP CYS TRP TRP ALA PRO ARG TRP SEQRES 59 A 943 MET LYS ARG VAL GLN GLU LYS GLU PHE ASN ILE PHE GLU SEQRES 60 A 943 MET LEU ARG ILE ASP GLU GLY LEU ARG LEU LYS ILE TYR SEQRES 61 A 943 LYS ASP THR GLU GLY TYR TYR THR ILE GLY ILE GLY HIS SEQRES 62 A 943 LEU LEU THR LYS SER PRO SER LEU ASN ALA ALA LYS SER SEQRES 63 A 943 GLU LEU ASP LYS ALA ILE GLY ARG ASN THR ASN GLY VAL SEQRES 64 A 943 ILE THR LYS ASP GLU ALA GLU LYS LEU PHE ASN GLN ASP SEQRES 65 A 943 VAL ASP ALA ALA VAL ARG GLY ILE LEU ARG ASN ALA LYS SEQRES 66 A 943 LEU LYS PRO VAL TYR ASP SER LEU ASP ALA VAL ARG ARG SEQRES 67 A 943 ALA ALA LEU ILE ASN MET VAL PHE GLN MET GLY GLU THR SEQRES 68 A 943 GLY VAL ALA GLY PHE THR ASN SER LEU ARG MET LEU GLN SEQRES 69 A 943 GLN LYS ARG TRP ASP GLU ALA ALA VAL ASN LEU ALA LYS SEQRES 70 A 943 SER ARG TRP TYR ASN GLN THR PRO ASN ARG ALA LYS ARG SEQRES 71 A 943 VAL ILE THR THR PHE ARG THR GLY THR TRP ASP ALA TYR SEQRES 72 A 943 GLU PHE HIS LEU GLY GLY ILE LYS ALA PHE HIS HIS HIS SEQRES 73 A 943 HIS HIS HIS HIS HIS HIS HIS HET AY6 A1001 30 HET L6T A1002 35 HET L6T A1003 35 HET L6T A1004 35 HET MHA A1005 13 HET MHA A1006 13 HETNAM AY6 5-(4-CHLOROPHENYL)-1-(2,4-DICHLOROPHENYL)-4-METHYL-N- HETNAM 2 AY6 (PIPERIDIN-1-YL)-1H-PYRAZOLE-3-CARBOXAMIDE HETNAM L6T ALPHA-D-GLUCOPYRANOSYL 6-O-DODECYL-ALPHA-D- HETNAM 2 L6T GLUCOPYRANOSIDE HETNAM MHA (CARBAMOYLMETHYL-CARBOXYMETHYL-AMINO)-ACETIC ACID HETSYN AY6 RIMONABANT HETSYN MHA N-(2-ACETAMIDO)IMINODIACETIC ACID FORMUL 2 AY6 C22 H21 CL3 N4 O FORMUL 3 L6T 3(C24 H46 O11) FORMUL 6 MHA 2(C6 H10 N2 O5) HELIX 1 AA1 ALA A 0 PHE A 12 1 13 HELIX 2 AA2 PHE A 12 ILE A 32 1 21 HELIX 3 AA3 SER A 33 VAL A 38 5 6 HELIX 4 AA4 SER A 48 GLY A 62 1 15 HELIX 5 AA5 ASP A 83 ASP A 100 1 18 HELIX 6 AA6 VAL A 122 LYS A 126 5 5 HELIX 7 AA7 ASP A 143 GLN A 160 1 18 HELIX 8 AA8 VAL A 161 GLY A 164 5 4 HELIX 9 AA9 GLY A 170 GLY A 206 1 37 HELIX 10 AB1 THR A 207 GLU A 234 1 28 HELIX 11 AB2 PHE A 241 GLU A 271 1 31 HELIX 12 AB3 ASP A 274 VAL A 302 1 29 HELIX 13 AB4 PRO A 303 PHE A 307 5 5 HELIX 14 AB5 GLN A 309 THR A 332 1 24 HELIX 15 AB6 THR A 332 GLY A 342 1 11 HELIX 16 AB7 PRO A 343 ALA A 347 5 5 HELIX 17 AB8 ILE A 402 LEU A 414 1 13 HELIX 18 AB9 SER A 428 LEU A 432 5 5 HELIX 19 AC1 ASN A 436 PHE A 449 1 14 HELIX 20 AC2 THR A 470 THR A 483 1 14 HELIX 21 AC3 ASP A 493 MET A 497 5 5 HELIX 22 AC4 ASN A 522 ASN A 524 5 3 HELIX 23 AC5 ASP A 525 LEU A 536 1 12 HELIX 24 AC6 GLY A 548 GLY A 584 1 37 HELIX 25 AC7 VAL A 586 VAL A 612 1 27 HELIX 26 AC8 GLY A 616 ASN A 621 1 6 HELIX 27 AC9 ALA A 629 LEU A 650 1 22 HELIX 28 AD1 LEU A 650 ARG A 660 1 11 HELIX 29 AD2 SER A 663 VAL A 694 1 32 HELIX 30 AD3 LEU A 698 THR A 717 1 20 HELIX 31 AD4 PHE A 722 LEU A 731 1 10 HELIX 32 AD5 ASN A 751 GLU A 760 1 10 HELIX 33 AD6 SER A 787 GLY A 800 1 14 HELIX 34 AD7 THR A 808 ARG A 829 1 22 HELIX 35 AD8 LEU A 833 LEU A 840 1 8 HELIX 36 AD9 ASP A 841 GLY A 862 1 22 HELIX 37 AE1 PHE A 863 GLN A 872 1 10 HELIX 38 AE2 ARG A 874 ALA A 883 1 10 HELIX 39 AE3 SER A 885 THR A 891 1 7 HELIX 40 AE4 THR A 891 GLY A 905 1 15 HELIX 41 AE5 TRP A 907 PHE A 912 1 6 SHEET 1 AA1 3 THR A 133 SER A 136 0 SHEET 2 AA1 3 VAL A 70 LEU A 73 -1 N LEU A 73 O THR A 133 SHEET 3 AA1 3 ILE A 166 ALA A 169 -1 O ALA A 169 N VAL A 70 SHEET 1 AA2 2 LEU A 424 GLY A 425 0 SHEET 2 AA2 2 LEU A 627 MET A 628 1 O LEU A 627 N GLY A 425 SHEET 1 AA3 3 VAL A 513 ASN A 518 0 SHEET 2 AA3 3 LEU A 457 LYS A 462 -1 N LEU A 459 O ILE A 516 SHEET 3 AA3 3 GLU A 543 GLY A 547 -1 O PHE A 545 N VAL A 460 SHEET 1 AA4 3 ARG A 763 LYS A 768 0 SHEET 2 AA4 3 TYR A 774 GLY A 777 -1 O THR A 775 N TYR A 767 SHEET 3 AA4 3 HIS A 780 THR A 783 -1 O LEU A 782 N TYR A 774 SITE 1 AC1 11 LEU A 248 ILE A 253 VAL A 638 GLY A 641 SITE 2 AC1 11 LEU A 642 ASP A 645 TYR A 646 PHE A 649 SITE 3 AC1 11 VAL A 689 ALA A 690 LEU A 708 SITE 1 AC2 10 GLN A 40 TYR A 44 SER A 54 LEU A 55 SITE 2 AC2 10 ASP A 58 ARG A 63 ASP A 64 ASP A 144 SITE 3 AC2 10 LEU A 171 THR A 179 SITE 1 AC3 4 THR A 66 SER A 67 GLN A 442 ARG A 453 SITE 1 AC4 8 ILE A 32 LEU A 34 GLY A 35 GLN A 186 SITE 2 AC4 8 ALA A 215 GLY A 219 LEU A 226 GLN A 243 SITE 1 AC5 8 ASP A 759 THR A 891 PRO A 892 ASN A 893 SITE 2 AC5 8 ARG A 894 ILE A 917 LYS A 918 ALA A 919 SITE 1 AC6 6 GLY A 862 PHE A 863 THR A 864 ASN A 865 SITE 2 AC6 6 SER A 866 ASN A 881 CRYST1 87.696 140.598 141.833 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011403 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007112 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007051 0.00000