data_6AJO # _entry.id 6AJO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6AJO pdb_00006ajo 10.2210/pdb6ajo/pdb WWPDB D_1300008819 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2019-05-29 2 'Structure model' 1 1 2024-03-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' struct_conn 5 2 'Structure model' struct_conn_type # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_struct_conn.conn_type_id' 4 2 'Structure model' '_struct_conn.id' 5 2 'Structure model' '_struct_conn.pdbx_dist_value' 6 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 2 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 8 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 9 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 10 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 11 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 12 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 13 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 14 2 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 15 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 16 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 17 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 18 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 19 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 20 2 'Structure model' '_struct_conn.ptnr2_label_seq_id' 21 2 'Structure model' '_struct_conn_type.id' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6AJO _pdbx_database_status.recvd_initial_deposition_date 2018-08-28 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site PDBJ _pdbx_database_status.process_site PDBJ _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Ahn, W.C.' 1 0000-0002-9432-2363 'Aroli, S.' 2 0000-0002-9834-2134 'Varshney, U.' 3 0000-0003-3196-5908 'Woo, E.J.' 4 0000-0001-6983-0270 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Nat.Chem.Biol. _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1552-4469 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 15 _citation.language ? _citation.page_first 607 _citation.page_last 614 _citation.title 'Covalent binding of uracil DNA glycosylase UdgX to abasic DNA upon uracil excision.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1038/s41589-019-0289-3 _citation.pdbx_database_id_PubMed 31101917 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ahn, W.C.' 1 ? primary 'Aroli, S.' 2 ? primary 'Kim, J.H.' 3 ? primary 'Moon, J.H.' 4 ? primary 'Lee, G.S.' 5 ? primary 'Lee, M.H.' 6 ? primary 'Sang, P.B.' 7 ? primary 'Oh, B.H.' 8 0000-0002-6437-8470 primary 'Varshney, U.' 9 ? primary 'Woo, E.J.' 10 0000-0001-6983-0270 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Uracil DNA glycosylase superfamily protein' 22201.283 1 ? ? ? ? 2 polymer syn ;DNA (5'-D(P*(ORP)P*TP*T)-3') ; 1367.909 1 ? ? ? ? 3 non-polymer syn 'IRON/SULFUR CLUSTER' 351.640 1 ? ? ? ? 4 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 5 non-polymer syn URACIL 112.087 1 ? ? ? ? 6 water nat water 18.015 15 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MAGAQDFVPHTADLAELAAAAGECRGCGLYRDATQAVFGAGGRSARIMMIGEQPGDKEDLAGLPFVGPAGRLLDRALEAA DIDRDALYVTNAVKHFKFTRAAGGKRRIHKTPSRTEVVACRPWLIAEMTSVEPDVVVLLGATAAKALLGNDFRVTQHRGE VLHVDDVPGDPALVATVHPSSLLRGPKEERESAFAGLVDDLRVAADVRP ; ;MAGAQDFVPHTADLAELAAAAGECRGCGLYRDATQAVFGAGGRSARIMMIGEQPGDKEDLAGLPFVGPAGRLLDRALEAA DIDRDALYVTNAVKHFKFTRAAGGKRRIHKTPSRTEVVACRPWLIAEMTSVEPDVVVLLGATAAKALLGNDFRVTQHRGE VLHVDDVPGDPALVATVHPSSLLRGPKEERESAFAGLVDDLRVAADVRP ; A ? 2 polydeoxyribonucleotide no yes '(DT)(DT)(ORP)(DT)(DT)' TTXTT F ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'IRON/SULFUR CLUSTER' SF4 4 'PHOSPHATE ION' PO4 5 URACIL URA 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 GLY n 1 4 ALA n 1 5 GLN n 1 6 ASP n 1 7 PHE n 1 8 VAL n 1 9 PRO n 1 10 HIS n 1 11 THR n 1 12 ALA n 1 13 ASP n 1 14 LEU n 1 15 ALA n 1 16 GLU n 1 17 LEU n 1 18 ALA n 1 19 ALA n 1 20 ALA n 1 21 ALA n 1 22 GLY n 1 23 GLU n 1 24 CYS n 1 25 ARG n 1 26 GLY n 1 27 CYS n 1 28 GLY n 1 29 LEU n 1 30 TYR n 1 31 ARG n 1 32 ASP n 1 33 ALA n 1 34 THR n 1 35 GLN n 1 36 ALA n 1 37 VAL n 1 38 PHE n 1 39 GLY n 1 40 ALA n 1 41 GLY n 1 42 GLY n 1 43 ARG n 1 44 SER n 1 45 ALA n 1 46 ARG n 1 47 ILE n 1 48 MET n 1 49 MET n 1 50 ILE n 1 51 GLY n 1 52 GLU n 1 53 GLN n 1 54 PRO n 1 55 GLY n 1 56 ASP n 1 57 LYS n 1 58 GLU n 1 59 ASP n 1 60 LEU n 1 61 ALA n 1 62 GLY n 1 63 LEU n 1 64 PRO n 1 65 PHE n 1 66 VAL n 1 67 GLY n 1 68 PRO n 1 69 ALA n 1 70 GLY n 1 71 ARG n 1 72 LEU n 1 73 LEU n 1 74 ASP n 1 75 ARG n 1 76 ALA n 1 77 LEU n 1 78 GLU n 1 79 ALA n 1 80 ALA n 1 81 ASP n 1 82 ILE n 1 83 ASP n 1 84 ARG n 1 85 ASP n 1 86 ALA n 1 87 LEU n 1 88 TYR n 1 89 VAL n 1 90 THR n 1 91 ASN n 1 92 ALA n 1 93 VAL n 1 94 LYS n 1 95 HIS n 1 96 PHE n 1 97 LYS n 1 98 PHE n 1 99 THR n 1 100 ARG n 1 101 ALA n 1 102 ALA n 1 103 GLY n 1 104 GLY n 1 105 LYS n 1 106 ARG n 1 107 ARG n 1 108 ILE n 1 109 HIS n 1 110 LYS n 1 111 THR n 1 112 PRO n 1 113 SER n 1 114 ARG n 1 115 THR n 1 116 GLU n 1 117 VAL n 1 118 VAL n 1 119 ALA n 1 120 CYS n 1 121 ARG n 1 122 PRO n 1 123 TRP n 1 124 LEU n 1 125 ILE n 1 126 ALA n 1 127 GLU n 1 128 MET n 1 129 THR n 1 130 SER n 1 131 VAL n 1 132 GLU n 1 133 PRO n 1 134 ASP n 1 135 VAL n 1 136 VAL n 1 137 VAL n 1 138 LEU n 1 139 LEU n 1 140 GLY n 1 141 ALA n 1 142 THR n 1 143 ALA n 1 144 ALA n 1 145 LYS n 1 146 ALA n 1 147 LEU n 1 148 LEU n 1 149 GLY n 1 150 ASN n 1 151 ASP n 1 152 PHE n 1 153 ARG n 1 154 VAL n 1 155 THR n 1 156 GLN n 1 157 HIS n 1 158 ARG n 1 159 GLY n 1 160 GLU n 1 161 VAL n 1 162 LEU n 1 163 HIS n 1 164 VAL n 1 165 ASP n 1 166 ASP n 1 167 VAL n 1 168 PRO n 1 169 GLY n 1 170 ASP n 1 171 PRO n 1 172 ALA n 1 173 LEU n 1 174 VAL n 1 175 ALA n 1 176 THR n 1 177 VAL n 1 178 HIS n 1 179 PRO n 1 180 SER n 1 181 SER n 1 182 LEU n 1 183 LEU n 1 184 ARG n 1 185 GLY n 1 186 PRO n 1 187 LYS n 1 188 GLU n 1 189 GLU n 1 190 ARG n 1 191 GLU n 1 192 SER n 1 193 ALA n 1 194 PHE n 1 195 ALA n 1 196 GLY n 1 197 LEU n 1 198 VAL n 1 199 ASP n 1 200 ASP n 1 201 LEU n 1 202 ARG n 1 203 VAL n 1 204 ALA n 1 205 ALA n 1 206 ASP n 1 207 VAL n 1 208 ARG n 1 209 PRO n 2 1 DT n 2 2 DT n 2 3 ORP n 2 4 DT n 2 5 DT n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 209 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene MSMEG_0265 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'MC2 155' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mycobacterium smegmatis MC2 155' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 246196 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 5 _pdbx_entity_src_syn.organism_scientific 'Mycobacterium smegmatis' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 1772 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 ORP saccharide . 2-DEOXY-5-PHOSPHONO-RIBOSE ? 'C5 H11 O7 P' 214.110 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SF4 non-polymer . 'IRON/SULFUR CLUSTER' ? 'Fe4 S4' 351.640 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 URA non-polymer . URACIL ? 'C4 H4 N2 O2' 112.087 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 ALA 2 2 2 ALA ALA A . n A 1 3 GLY 3 3 3 GLY GLY A . n A 1 4 ALA 4 4 4 ALA ALA A . n A 1 5 GLN 5 5 5 GLN GLN A . n A 1 6 ASP 6 6 6 ASP ASP A . n A 1 7 PHE 7 7 7 PHE PHE A . n A 1 8 VAL 8 8 8 VAL VAL A . n A 1 9 PRO 9 9 9 PRO PRO A . n A 1 10 HIS 10 10 10 HIS HIS A . n A 1 11 THR 11 11 11 THR THR A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 ASP 13 13 13 ASP ASP A . n A 1 14 LEU 14 14 14 LEU LEU A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 LEU 17 17 17 LEU LEU A . n A 1 18 ALA 18 18 18 ALA ALA A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 ALA 21 21 21 ALA ALA A . n A 1 22 GLY 22 22 22 GLY GLY A . n A 1 23 GLU 23 23 23 GLU GLU A . n A 1 24 CYS 24 24 24 CYS CYS A . n A 1 25 ARG 25 25 25 ARG ARG A . n A 1 26 GLY 26 26 26 GLY GLY A . n A 1 27 CYS 27 27 27 CYS CYS A . n A 1 28 GLY 28 28 28 GLY GLY A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 TYR 30 30 30 TYR TYR A . n A 1 31 ARG 31 31 31 ARG ARG A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 ALA 33 33 33 ALA ALA A . n A 1 34 THR 34 34 34 THR THR A . n A 1 35 GLN 35 35 35 GLN GLN A . n A 1 36 ALA 36 36 36 ALA ALA A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 PHE 38 38 38 PHE PHE A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 ARG 43 43 43 ARG ARG A . n A 1 44 SER 44 44 44 SER SER A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 ARG 46 46 46 ARG ARG A . n A 1 47 ILE 47 47 47 ILE ILE A . n A 1 48 MET 48 48 48 MET MET A . n A 1 49 MET 49 49 49 MET MET A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 GLU 52 52 52 GLU GLU A . n A 1 53 GLN 53 53 53 GLN GLN A . n A 1 54 PRO 54 54 54 PRO PRO A . n A 1 55 GLY 55 55 55 GLY GLY A . n A 1 56 ASP 56 56 56 ASP ASP A . n A 1 57 LYS 57 57 57 LYS LYS A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 ASP 59 59 59 ASP ASP A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 ALA 61 61 61 ALA ALA A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 LEU 63 63 63 LEU LEU A . n A 1 64 PRO 64 64 64 PRO PRO A . n A 1 65 PHE 65 65 65 PHE PHE A . n A 1 66 VAL 66 66 66 VAL VAL A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 PRO 68 68 68 PRO PRO A . n A 1 69 ALA 69 69 69 ALA ALA A . n A 1 70 GLY 70 70 70 GLY GLY A . n A 1 71 ARG 71 71 71 ARG ARG A . n A 1 72 LEU 72 72 72 LEU LEU A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 ASP 74 74 74 ASP ASP A . n A 1 75 ARG 75 75 75 ARG ARG A . n A 1 76 ALA 76 76 76 ALA ALA A . n A 1 77 LEU 77 77 77 LEU LEU A . n A 1 78 GLU 78 78 78 GLU GLU A . n A 1 79 ALA 79 79 79 ALA ALA A . n A 1 80 ALA 80 80 80 ALA ALA A . n A 1 81 ASP 81 81 81 ASP ASP A . n A 1 82 ILE 82 82 82 ILE ILE A . n A 1 83 ASP 83 83 83 ASP ASP A . n A 1 84 ARG 84 84 84 ARG ARG A . n A 1 85 ASP 85 85 85 ASP ASP A . n A 1 86 ALA 86 86 86 ALA ALA A . n A 1 87 LEU 87 87 87 LEU LEU A . n A 1 88 TYR 88 88 88 TYR TYR A . n A 1 89 VAL 89 89 89 VAL VAL A . n A 1 90 THR 90 90 90 THR THR A . n A 1 91 ASN 91 91 91 ASN ASN A . n A 1 92 ALA 92 92 92 ALA ALA A . n A 1 93 VAL 93 93 93 VAL VAL A . n A 1 94 LYS 94 94 94 LYS LYS A . n A 1 95 HIS 95 95 95 HIS HIS A . n A 1 96 PHE 96 96 96 PHE PHE A . n A 1 97 LYS 97 97 97 LYS LYS A . n A 1 98 PHE 98 98 98 PHE PHE A . n A 1 99 THR 99 99 99 THR THR A . n A 1 100 ARG 100 100 100 ARG ALA A . n A 1 101 ALA 101 101 ? ? ? A . n A 1 102 ALA 102 102 ? ? ? A . n A 1 103 GLY 103 103 ? ? ? A . n A 1 104 GLY 104 104 ? ? ? A . n A 1 105 LYS 105 105 ? ? ? A . n A 1 106 ARG 106 106 106 ARG ALA A . n A 1 107 ARG 107 107 107 ARG ARG A . n A 1 108 ILE 108 108 108 ILE ILE A . n A 1 109 HIS 109 109 109 HIS HIS A . n A 1 110 LYS 110 110 110 LYS LYS A . n A 1 111 THR 111 111 111 THR THR A . n A 1 112 PRO 112 112 112 PRO PRO A . n A 1 113 SER 113 113 113 SER SER A . n A 1 114 ARG 114 114 114 ARG ARG A . n A 1 115 THR 115 115 115 THR THR A . n A 1 116 GLU 116 116 116 GLU GLU A . n A 1 117 VAL 117 117 117 VAL VAL A . n A 1 118 VAL 118 118 118 VAL VAL A . n A 1 119 ALA 119 119 119 ALA ALA A . n A 1 120 CYS 120 120 120 CYS CYS A . n A 1 121 ARG 121 121 121 ARG ARG A . n A 1 122 PRO 122 122 122 PRO PRO A . n A 1 123 TRP 123 123 123 TRP TRP A . n A 1 124 LEU 124 124 124 LEU LEU A . n A 1 125 ILE 125 125 125 ILE ILE A . n A 1 126 ALA 126 126 126 ALA ALA A . n A 1 127 GLU 127 127 127 GLU GLU A . n A 1 128 MET 128 128 128 MET MET A . n A 1 129 THR 129 129 129 THR THR A . n A 1 130 SER 130 130 130 SER SER A . n A 1 131 VAL 131 131 131 VAL VAL A . n A 1 132 GLU 132 132 132 GLU GLU A . n A 1 133 PRO 133 133 133 PRO PRO A . n A 1 134 ASP 134 134 134 ASP ASP A . n A 1 135 VAL 135 135 135 VAL VAL A . n A 1 136 VAL 136 136 136 VAL VAL A . n A 1 137 VAL 137 137 137 VAL VAL A . n A 1 138 LEU 138 138 138 LEU LEU A . n A 1 139 LEU 139 139 139 LEU LEU A . n A 1 140 GLY 140 140 140 GLY GLY A . n A 1 141 ALA 141 141 141 ALA ALA A . n A 1 142 THR 142 142 142 THR THR A . n A 1 143 ALA 143 143 143 ALA ALA A . n A 1 144 ALA 144 144 144 ALA ALA A . n A 1 145 LYS 145 145 145 LYS LYS A . n A 1 146 ALA 146 146 146 ALA ALA A . n A 1 147 LEU 147 147 147 LEU LEU A . n A 1 148 LEU 148 148 148 LEU LEU A . n A 1 149 GLY 149 149 149 GLY GLY A . n A 1 150 ASN 150 150 150 ASN ASN A . n A 1 151 ASP 151 151 151 ASP ASP A . n A 1 152 PHE 152 152 152 PHE PHE A . n A 1 153 ARG 153 153 153 ARG ARG A . n A 1 154 VAL 154 154 154 VAL VAL A . n A 1 155 THR 155 155 155 THR THR A . n A 1 156 GLN 156 156 156 GLN GLN A . n A 1 157 HIS 157 157 157 HIS HIS A . n A 1 158 ARG 158 158 158 ARG ARG A . n A 1 159 GLY 159 159 159 GLY GLY A . n A 1 160 GLU 160 160 160 GLU GLU A . n A 1 161 VAL 161 161 161 VAL VAL A . n A 1 162 LEU 162 162 162 LEU LEU A . n A 1 163 HIS 163 163 163 HIS HIS A . n A 1 164 VAL 164 164 164 VAL VAL A . n A 1 165 ASP 165 165 165 ASP ASP A . n A 1 166 ASP 166 166 166 ASP ASP A . n A 1 167 VAL 167 167 167 VAL VAL A . n A 1 168 PRO 168 168 168 PRO PRO A . n A 1 169 GLY 169 169 169 GLY GLY A . n A 1 170 ASP 170 170 170 ASP ALA A . n A 1 171 PRO 171 171 171 PRO PRO A . n A 1 172 ALA 172 172 172 ALA ALA A . n A 1 173 LEU 173 173 173 LEU LEU A . n A 1 174 VAL 174 174 174 VAL VAL A . n A 1 175 ALA 175 175 175 ALA ALA A . n A 1 176 THR 176 176 176 THR THR A . n A 1 177 VAL 177 177 177 VAL VAL A . n A 1 178 HIS 178 178 178 HIS HIS A . n A 1 179 PRO 179 179 179 PRO PRO A . n A 1 180 SER 180 180 180 SER SER A . n A 1 181 SER 181 181 181 SER SER A . n A 1 182 LEU 182 182 182 LEU LEU A . n A 1 183 LEU 183 183 183 LEU LEU A . n A 1 184 ARG 184 184 184 ARG ARG A . n A 1 185 GLY 185 185 185 GLY GLY A . n A 1 186 PRO 186 186 186 PRO PRO A . n A 1 187 LYS 187 187 187 LYS LYS A . n A 1 188 GLU 188 188 188 GLU GLU A . n A 1 189 GLU 189 189 189 GLU GLU A . n A 1 190 ARG 190 190 190 ARG ARG A . n A 1 191 GLU 191 191 191 GLU GLU A . n A 1 192 SER 192 192 192 SER SER A . n A 1 193 ALA 193 193 193 ALA ALA A . n A 1 194 PHE 194 194 194 PHE PHE A . n A 1 195 ALA 195 195 195 ALA ALA A . n A 1 196 GLY 196 196 196 GLY GLY A . n A 1 197 LEU 197 197 197 LEU LEU A . n A 1 198 VAL 198 198 198 VAL VAL A . n A 1 199 ASP 199 199 199 ASP ASP A . n A 1 200 ASP 200 200 200 ASP ASP A . n A 1 201 LEU 201 201 201 LEU LEU A . n A 1 202 ARG 202 202 202 ARG ARG A . n A 1 203 VAL 203 203 203 VAL VAL A . n A 1 204 ALA 204 204 204 ALA ALA A . n A 1 205 ALA 205 205 205 ALA ALA A . n A 1 206 ASP 206 206 206 ASP ASP A . n A 1 207 VAL 207 207 207 VAL VAL A . n A 1 208 ARG 208 208 208 ARG ARG A . n A 1 209 PRO 209 209 ? ? ? A . n B 2 1 DT 1 7 ? ? ? F . n B 2 2 DT 2 8 ? ? ? F . n B 2 3 ORP 3 9 9 ORP ORP F . n B 2 4 DT 4 10 10 DT DT F . n B 2 5 DT 5 11 11 DT DT F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SF4 1 301 210 SF4 SF4 A . D 4 PO4 1 302 1 PO4 PO4 A . E 5 URA 1 303 7578 URA URA A . F 6 HOH 1 401 1 HOH HOH A . F 6 HOH 2 402 7 HOH HOH A . F 6 HOH 3 403 32 HOH HOH A . F 6 HOH 4 404 30 HOH HOH A . F 6 HOH 5 405 11 HOH HOH A . F 6 HOH 6 406 6 HOH HOH A . F 6 HOH 7 407 4 HOH HOH A . F 6 HOH 8 408 8 HOH HOH A . F 6 HOH 9 409 10 HOH HOH A . F 6 HOH 10 410 5 HOH HOH A . F 6 HOH 11 411 9 HOH HOH A . F 6 HOH 12 412 34 HOH HOH A . G 6 HOH 1 101 6 HOH HOH F . G 6 HOH 2 102 1 HOH HOH F . G 6 HOH 3 103 31 HOH HOH F . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 100 ? CG ? A ARG 100 CG 2 1 Y 1 A ARG 100 ? CD ? A ARG 100 CD 3 1 Y 1 A ARG 100 ? NE ? A ARG 100 NE 4 1 Y 1 A ARG 100 ? CZ ? A ARG 100 CZ 5 1 Y 1 A ARG 100 ? NH1 ? A ARG 100 NH1 6 1 Y 1 A ARG 100 ? NH2 ? A ARG 100 NH2 7 1 Y 1 A ARG 106 ? CG ? A ARG 106 CG 8 1 Y 1 A ARG 106 ? CD ? A ARG 106 CD 9 1 Y 1 A ARG 106 ? NE ? A ARG 106 NE 10 1 Y 1 A ARG 106 ? CZ ? A ARG 106 CZ 11 1 Y 1 A ARG 106 ? NH1 ? A ARG 106 NH1 12 1 Y 1 A ARG 106 ? NH2 ? A ARG 106 NH2 13 1 Y 1 A ASP 170 ? CG ? A ASP 170 CG 14 1 Y 1 A ASP 170 ? OD1 ? A ASP 170 OD1 15 1 Y 1 A ASP 170 ? OD2 ? A ASP 170 OD2 16 1 Y 1 F ORP 9 ? O1 ? B ORP 3 O1 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(1.12_2829: ???)' 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-2000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? . 4 # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 6AJO _cell.details ? _cell.formula_units_Z ? _cell.length_a 36.829 _cell.length_a_esd ? _cell.length_b 64.450 _cell.length_b_esd ? _cell.length_c 82.900 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AJO _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6AJO _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.14 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 42.59 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '2.4M sodium malonate pH 7.0, 0.1 M Bis-Tris propane pH 7.0.' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 190 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 270' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2015-04-17 _diffrn_detector.pdbx_frequency ? # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.987 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'PAL/PLS BEAMLINE 7A (6B, 6C1)' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.987 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline '7A (6B, 6C1)' _diffrn_source.pdbx_synchrotron_site PAL/PLS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6AJO _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.269 _reflns.d_resolution_low 50.00 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 9584 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.0 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 11.9 _reflns.pdbx_Rmerge_I_obs 0.098 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 31.2 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.28 _reflns_shell.d_res_low 2.32 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 415 _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.938 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6AJO _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.269 _refine.ls_d_res_low 31.976 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 9522 _refine.ls_number_reflns_R_free 953 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.06 _refine.ls_percent_reflns_R_free 10.01 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1985 _refine.ls_R_factor_R_free 0.2571 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1919 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.33 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct MIR _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 28.13 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.30 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1501 _refine_hist.pdbx_number_atoms_nucleic_acid 52 _refine_hist.pdbx_number_atoms_ligand 21 _refine_hist.number_atoms_solvent 15 _refine_hist.number_atoms_total 1589 _refine_hist.d_res_high 2.269 _refine_hist.d_res_low 31.976 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.021 ? 1607 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 2.091 ? 2199 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 26.492 ? 576 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.087 ? 250 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 ? 282 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.2694 2.3890 . . 126 1142 95.00 . . . 0.3237 . 0.2689 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3890 2.5386 . . 135 1202 100.00 . . . 0.2921 . 0.2306 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.5386 2.7345 . . 135 1219 100.00 . . . 0.2982 . 0.2108 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.7345 3.0095 . . 136 1218 100.00 . . . 0.2982 . 0.1944 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.0095 3.4446 . . 136 1231 100.00 . . . 0.2421 . 0.1862 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.4446 4.3381 . . 140 1248 100.00 . . . 0.2251 . 0.1681 . . . . . . . . . . 'X-RAY DIFFRACTION' 4.3381 31.9796 . . 145 1309 99.00 . . . 0.2513 . 0.1885 . . . . . . . . . . # _struct.entry_id 6AJO _struct.title 'Complex form of Uracil DNA glycosylase X and uracil-DNA.' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6AJO _struct_keywords.text 'DNA repair, Base excision, DNA-Protein crosslink., DNA BINDING PROTEIN' _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP A0QP43_MYCS2 A0QP43 ? 1 ;MAGAQDFVPHTADLAELAAAAGECRGCGLYRDATQAVFGAGGRSARIMMIGEQPGDKEDLAGLPFVGPAGRLLDRALEAA DIDRDALYVTNAVKHFKFTRAAGGKRRIHKTPSRTEVVACRPWLIAEMTSVEPDVVVLLGATAAKALLGNDFRVTQHRGE VLHVDDVPGDPALVATVHPSSLLRGPKEERESAFAGLVDDLRVAADVRP ; 1 2 PDB 6AJO 6AJO ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6AJO A 1 ? 209 ? A0QP43 1 ? 209 ? 1 209 2 2 6AJO F 1 ? 5 ? 6AJO 7 ? 11 ? 7 11 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2130 ? 1 MORE -31 ? 1 'SSA (A^2)' 9510 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'gel filtration' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ALA A 4 ? VAL A 8 ? ALA A 4 VAL A 8 5 ? 5 HELX_P HELX_P2 AA2 ASP A 13 ? GLY A 22 ? ASP A 13 GLY A 22 1 ? 10 HELX_P HELX_P3 AA3 CYS A 27 ? ARG A 31 ? CYS A 27 ARG A 31 5 ? 5 HELX_P HELX_P4 AA4 GLY A 55 ? GLY A 62 ? GLY A 55 GLY A 62 1 ? 8 HELX_P HELX_P5 AA5 GLY A 67 ? ALA A 80 ? GLY A 67 ALA A 80 1 ? 14 HELX_P HELX_P6 AA6 ASP A 83 ? ASP A 85 ? ASP A 83 ASP A 85 5 ? 3 HELX_P HELX_P7 AA7 SER A 113 ? GLU A 132 ? SER A 113 GLU A 132 1 ? 20 HELX_P HELX_P8 AA8 GLY A 140 ? GLY A 149 ? GLY A 140 GLY A 149 1 ? 10 HELX_P HELX_P9 AA9 ARG A 153 ? ARG A 158 ? ARG A 153 ARG A 158 1 ? 6 HELX_P HELX_P10 AB1 HIS A 178 ? GLY A 185 ? HIS A 178 GLY A 185 1 ? 8 HELX_P HELX_P11 AB2 PRO A 186 ? GLU A 188 ? PRO A 186 GLU A 188 5 ? 3 HELX_P HELX_P12 AB3 GLU A 189 ? ASP A 206 ? GLU A 189 ASP A 206 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? B ORP 3 O3 ? ? ? 1_555 B DT 4 P ? ? F ORP 9 F DT 10 1_555 ? ? ? ? ? ? ? 1.489 ? ? metalc1 metalc ? ? A CYS 24 SG ? ? ? 1_555 C SF4 . FE1 ? ? A CYS 24 A SF4 301 1_555 ? ? ? ? ? ? ? 2.126 ? ? metalc2 metalc ? ? A CYS 27 SG ? ? ? 1_555 C SF4 . FE2 ? ? A CYS 27 A SF4 301 1_555 ? ? ? ? ? ? ? 1.953 ? ? metalc3 metalc ? ? A CYS 120 SG ? ? ? 1_555 C SF4 . FE4 ? ? A CYS 120 A SF4 301 1_555 ? ? ? ? ? ? ? 2.173 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 24 ? A CYS 24 ? 1_555 FE1 ? C SF4 . ? A SF4 301 ? 1_555 S2 ? C SF4 . ? A SF4 301 ? 1_555 107.5 ? 2 SG ? A CYS 24 ? A CYS 24 ? 1_555 FE1 ? C SF4 . ? A SF4 301 ? 1_555 S3 ? C SF4 . ? A SF4 301 ? 1_555 125.1 ? 3 S2 ? C SF4 . ? A SF4 301 ? 1_555 FE1 ? C SF4 . ? A SF4 301 ? 1_555 S3 ? C SF4 . ? A SF4 301 ? 1_555 92.3 ? 4 SG ? A CYS 24 ? A CYS 24 ? 1_555 FE1 ? C SF4 . ? A SF4 301 ? 1_555 S4 ? C SF4 . ? A SF4 301 ? 1_555 138.6 ? 5 S2 ? C SF4 . ? A SF4 301 ? 1_555 FE1 ? C SF4 . ? A SF4 301 ? 1_555 S4 ? C SF4 . ? A SF4 301 ? 1_555 95.7 ? 6 S3 ? C SF4 . ? A SF4 301 ? 1_555 FE1 ? C SF4 . ? A SF4 301 ? 1_555 S4 ? C SF4 . ? A SF4 301 ? 1_555 86.5 ? 7 SG ? A CYS 27 ? A CYS 27 ? 1_555 FE2 ? C SF4 . ? A SF4 301 ? 1_555 S1 ? C SF4 . ? A SF4 301 ? 1_555 110.1 ? 8 SG ? A CYS 27 ? A CYS 27 ? 1_555 FE2 ? C SF4 . ? A SF4 301 ? 1_555 S3 ? C SF4 . ? A SF4 301 ? 1_555 131.9 ? 9 S1 ? C SF4 . ? A SF4 301 ? 1_555 FE2 ? C SF4 . ? A SF4 301 ? 1_555 S3 ? C SF4 . ? A SF4 301 ? 1_555 87.9 ? 10 SG ? A CYS 27 ? A CYS 27 ? 1_555 FE2 ? C SF4 . ? A SF4 301 ? 1_555 S4 ? C SF4 . ? A SF4 301 ? 1_555 131.4 ? 11 S1 ? C SF4 . ? A SF4 301 ? 1_555 FE2 ? C SF4 . ? A SF4 301 ? 1_555 S4 ? C SF4 . ? A SF4 301 ? 1_555 91.6 ? 12 S3 ? C SF4 . ? A SF4 301 ? 1_555 FE2 ? C SF4 . ? A SF4 301 ? 1_555 S4 ? C SF4 . ? A SF4 301 ? 1_555 90.2 ? 13 SG ? A CYS 120 ? A CYS 120 ? 1_555 FE4 ? C SF4 . ? A SF4 301 ? 1_555 S1 ? C SF4 . ? A SF4 301 ? 1_555 124.1 ? 14 SG ? A CYS 120 ? A CYS 120 ? 1_555 FE4 ? C SF4 . ? A SF4 301 ? 1_555 S2 ? C SF4 . ? A SF4 301 ? 1_555 122.7 ? 15 S1 ? C SF4 . ? A SF4 301 ? 1_555 FE4 ? C SF4 . ? A SF4 301 ? 1_555 S2 ? C SF4 . ? A SF4 301 ? 1_555 97.0 ? 16 SG ? A CYS 120 ? A CYS 120 ? 1_555 FE4 ? C SF4 . ? A SF4 301 ? 1_555 S3 ? C SF4 . ? A SF4 301 ? 1_555 126.0 ? 17 S1 ? C SF4 . ? A SF4 301 ? 1_555 FE4 ? C SF4 . ? A SF4 301 ? 1_555 S3 ? C SF4 . ? A SF4 301 ? 1_555 86.1 ? 18 S2 ? C SF4 . ? A SF4 301 ? 1_555 FE4 ? C SF4 . ? A SF4 301 ? 1_555 S3 ? C SF4 . ? A SF4 301 ? 1_555 91.0 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LEU A 87 ? ASN A 91 ? LEU A 87 ASN A 91 AA1 2 ILE A 47 ? GLY A 51 ? ILE A 47 GLY A 51 AA1 3 VAL A 135 ? LEU A 139 ? VAL A 135 LEU A 139 AA1 4 ALA A 172 ? THR A 176 ? ALA A 172 THR A 176 AA2 1 PHE A 98 ? THR A 99 ? PHE A 98 THR A 99 AA2 2 ILE A 108 ? HIS A 109 ? ILE A 108 HIS A 109 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O THR A 90 ? O THR A 90 N GLY A 51 ? N GLY A 51 AA1 2 3 N MET A 48 ? N MET A 48 O VAL A 137 ? O VAL A 137 AA1 3 4 N LEU A 138 ? N LEU A 138 O VAL A 174 ? O VAL A 174 AA2 1 2 N THR A 99 ? N THR A 99 O ILE A 108 ? O ILE A 108 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SF4 301 ? 5 'binding site for residue SF4 A 301' AC2 Software A PO4 302 ? 7 'binding site for residue PO4 A 302' AC3 Software A URA 303 ? 8 'binding site for residue URA A 303' AC4 Software ? ? ? ? 22 'binding site for Poly-Saccharide residues ORP F 9 through HIS A 109' AC5 Software F ORP 9 ? 16 'binding site for Di-Saccharide ORP F 9 and DT F 10' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 CYS A 24 ? CYS A 24 . ? 1_555 ? 2 AC1 5 GLY A 26 ? GLY A 26 . ? 1_555 ? 3 AC1 5 CYS A 27 ? CYS A 27 . ? 1_555 ? 4 AC1 5 HIS A 95 ? HIS A 95 . ? 1_555 ? 5 AC1 5 CYS A 120 ? CYS A 120 . ? 1_555 ? 6 AC2 7 ALA A 141 ? ALA A 141 . ? 1_555 ? 7 AC2 7 LYS A 145 ? LYS A 145 . ? 1_555 ? 8 AC2 7 PHE A 152 ? PHE A 152 . ? 1_555 ? 9 AC2 7 ARG A 153 ? ARG A 153 . ? 1_555 ? 10 AC2 7 VAL A 154 ? VAL A 154 . ? 1_555 ? 11 AC2 7 THR A 155 ? THR A 155 . ? 1_555 ? 12 AC2 7 DT B 5 ? DT F 11 . ? 1_555 ? 13 AC3 8 GLU A 52 ? GLU A 52 . ? 1_555 ? 14 AC3 8 GLN A 53 ? GLN A 53 . ? 1_555 ? 15 AC3 8 GLU A 58 ? GLU A 58 . ? 1_555 ? 16 AC3 8 PRO A 64 ? PRO A 64 . ? 1_555 ? 17 AC3 8 PHE A 65 ? PHE A 65 . ? 1_555 ? 18 AC3 8 ASN A 91 ? ASN A 91 . ? 1_555 ? 19 AC3 8 HIS A 178 ? HIS A 178 . ? 1_555 ? 20 AC3 8 ORP B 3 ? ORP F 9 . ? 1_555 ? 21 AC4 22 PHE A 7 ? PHE A 7 . ? 1_555 ? 22 AC4 22 VAL A 8 ? VAL A 8 . ? 1_555 ? 23 AC4 22 THR A 11 ? THR A 11 . ? 1_555 ? 24 AC4 22 THR A 11 ? THR A 11 . ? 2_775 ? 25 AC4 22 GLU A 52 ? GLU A 52 . ? 1_555 ? 26 AC4 22 GLN A 53 ? GLN A 53 . ? 1_555 ? 27 AC4 22 GLY A 67 ? GLY A 67 . ? 1_555 ? 28 AC4 22 PRO A 68 ? PRO A 68 . ? 1_555 ? 29 AC4 22 ALA A 69 ? ALA A 69 . ? 1_555 ? 30 AC4 22 ILE A 108 ? ILE A 108 . ? 1_555 ? 31 AC4 22 LYS A 110 ? LYS A 110 . ? 1_555 ? 32 AC4 22 HIS A 178 ? HIS A 178 . ? 1_555 ? 33 AC4 22 SER A 180 ? SER A 180 . ? 1_555 ? 34 AC4 22 SER A 181 ? SER A 181 . ? 1_555 ? 35 AC4 22 LEU A 183 ? LEU A 183 . ? 2_774 ? 36 AC4 22 ARG A 184 ? ARG A 184 . ? 2_774 ? 37 AC4 22 ARG A 184 ? ARG A 184 . ? 1_555 ? 38 AC4 22 URA E . ? URA A 303 . ? 1_555 ? 39 AC4 22 DT B 5 ? DT F 11 . ? 1_555 ? 40 AC4 22 HOH G . ? HOH F 101 . ? 1_555 ? 41 AC4 22 HOH G . ? HOH F 102 . ? 1_555 ? 42 AC4 22 HOH G . ? HOH F 103 . ? 1_555 ? 43 AC5 16 THR A 11 ? THR A 11 . ? 2_775 ? 44 AC5 16 GLU A 52 ? GLU A 52 . ? 1_555 ? 45 AC5 16 GLN A 53 ? GLN A 53 . ? 1_555 ? 46 AC5 16 GLY A 67 ? GLY A 67 . ? 1_555 ? 47 AC5 16 PRO A 68 ? PRO A 68 . ? 1_555 ? 48 AC5 16 ALA A 69 ? ALA A 69 . ? 1_555 ? 49 AC5 16 HIS A 109 ? HIS A 109 . ? 1_555 ? 50 AC5 16 HIS A 178 ? HIS A 178 . ? 1_555 ? 51 AC5 16 SER A 180 ? SER A 180 . ? 1_555 ? 52 AC5 16 SER A 181 ? SER A 181 . ? 1_555 ? 53 AC5 16 ARG A 184 ? ARG A 184 . ? 1_555 ? 54 AC5 16 URA E . ? URA A 303 . ? 1_555 ? 55 AC5 16 DT B 5 ? DT F 11 . ? 1_555 ? 56 AC5 16 HOH G . ? HOH F 101 . ? 1_555 ? 57 AC5 16 HOH G . ? HOH F 102 . ? 1_555 ? 58 AC5 16 HOH G . ? HOH F 103 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HD2 A HIS 95 ? ? FE3 A SF4 301 ? ? 1.37 2 1 HO3 F ORP 9 ? ? OP2 F DT 10 ? ? 1.39 3 1 NE2 A HIS 109 ? ? C1 F ORP 9 ? ? 1.50 4 1 O3 F ORP 9 ? ? OP2 F DT 10 ? ? 1.80 5 1 O1P F ORP 9 ? ? O F HOH 101 ? ? 2.15 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 170 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 36.33 _pdbx_validate_torsion.psi 63.67 # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 48.8789 _pdbx_refine_tls.origin_y 67.8633 _pdbx_refine_tls.origin_z 13.3974 _pdbx_refine_tls.T[1][1] 0.3487 _pdbx_refine_tls.T[2][2] 0.3635 _pdbx_refine_tls.T[3][3] 0.3357 _pdbx_refine_tls.T[1][2] -0.0121 _pdbx_refine_tls.T[1][3] -0.0106 _pdbx_refine_tls.T[2][3] 0.0006 _pdbx_refine_tls.L[1][1] 0.5760 _pdbx_refine_tls.L[2][2] 0.4475 _pdbx_refine_tls.L[3][3] 0.3417 _pdbx_refine_tls.L[1][2] -0.1909 _pdbx_refine_tls.L[1][3] 0.1505 _pdbx_refine_tls.L[2][3] -0.0294 _pdbx_refine_tls.S[1][1] 0.0319 _pdbx_refine_tls.S[1][2] 0.0672 _pdbx_refine_tls.S[1][3] -0.0404 _pdbx_refine_tls.S[2][1] -0.0006 _pdbx_refine_tls.S[2][2] -0.0003 _pdbx_refine_tls.S[2][3] 0.0136 _pdbx_refine_tls.S[3][1] -0.0155 _pdbx_refine_tls.S[3][2] -0.0190 _pdbx_refine_tls.S[3][3] 0.0000 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A ALA 101 ? A ALA 101 3 1 Y 1 A ALA 102 ? A ALA 102 4 1 Y 1 A GLY 103 ? A GLY 103 5 1 Y 1 A GLY 104 ? A GLY 104 6 1 Y 1 A LYS 105 ? A LYS 105 7 1 Y 1 A PRO 209 ? A PRO 209 8 1 Y 1 F DT 7 ? B DT 1 9 1 Y 1 F DT 8 ? B DT 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DT OP3 O N N 88 DT P P N N 89 DT OP1 O N N 90 DT OP2 O N N 91 DT "O5'" O N N 92 DT "C5'" C N N 93 DT "C4'" C N R 94 DT "O4'" O N N 95 DT "C3'" C N S 96 DT "O3'" O N N 97 DT "C2'" C N N 98 DT "C1'" C N R 99 DT N1 N N N 100 DT C2 C N N 101 DT O2 O N N 102 DT N3 N N N 103 DT C4 C N N 104 DT O4 O N N 105 DT C5 C N N 106 DT C7 C N N 107 DT C6 C N N 108 DT HOP3 H N N 109 DT HOP2 H N N 110 DT "H5'" H N N 111 DT "H5''" H N N 112 DT "H4'" H N N 113 DT "H3'" H N N 114 DT "HO3'" H N N 115 DT "H2'" H N N 116 DT "H2''" H N N 117 DT "H1'" H N N 118 DT H3 H N N 119 DT H71 H N N 120 DT H72 H N N 121 DT H73 H N N 122 DT H6 H N N 123 GLN N N N N 124 GLN CA C N S 125 GLN C C N N 126 GLN O O N N 127 GLN CB C N N 128 GLN CG C N N 129 GLN CD C N N 130 GLN OE1 O N N 131 GLN NE2 N N N 132 GLN OXT O N N 133 GLN H H N N 134 GLN H2 H N N 135 GLN HA H N N 136 GLN HB2 H N N 137 GLN HB3 H N N 138 GLN HG2 H N N 139 GLN HG3 H N N 140 GLN HE21 H N N 141 GLN HE22 H N N 142 GLN HXT H N N 143 GLU N N N N 144 GLU CA C N S 145 GLU C C N N 146 GLU O O N N 147 GLU CB C N N 148 GLU CG C N N 149 GLU CD C N N 150 GLU OE1 O N N 151 GLU OE2 O N N 152 GLU OXT O N N 153 GLU H H N N 154 GLU H2 H N N 155 GLU HA H N N 156 GLU HB2 H N N 157 GLU HB3 H N N 158 GLU HG2 H N N 159 GLU HG3 H N N 160 GLU HE2 H N N 161 GLU HXT H N N 162 GLY N N N N 163 GLY CA C N N 164 GLY C C N N 165 GLY O O N N 166 GLY OXT O N N 167 GLY H H N N 168 GLY H2 H N N 169 GLY HA2 H N N 170 GLY HA3 H N N 171 GLY HXT H N N 172 HIS N N N N 173 HIS CA C N S 174 HIS C C N N 175 HIS O O N N 176 HIS CB C N N 177 HIS CG C Y N 178 HIS ND1 N Y N 179 HIS CD2 C Y N 180 HIS CE1 C Y N 181 HIS NE2 N Y N 182 HIS OXT O N N 183 HIS H H N N 184 HIS H2 H N N 185 HIS HA H N N 186 HIS HB2 H N N 187 HIS HB3 H N N 188 HIS HD1 H N N 189 HIS HD2 H N N 190 HIS HE1 H N N 191 HIS HE2 H N N 192 HIS HXT H N N 193 HOH O O N N 194 HOH H1 H N N 195 HOH H2 H N N 196 ILE N N N N 197 ILE CA C N S 198 ILE C C N N 199 ILE O O N N 200 ILE CB C N S 201 ILE CG1 C N N 202 ILE CG2 C N N 203 ILE CD1 C N N 204 ILE OXT O N N 205 ILE H H N N 206 ILE H2 H N N 207 ILE HA H N N 208 ILE HB H N N 209 ILE HG12 H N N 210 ILE HG13 H N N 211 ILE HG21 H N N 212 ILE HG22 H N N 213 ILE HG23 H N N 214 ILE HD11 H N N 215 ILE HD12 H N N 216 ILE HD13 H N N 217 ILE HXT H N N 218 LEU N N N N 219 LEU CA C N S 220 LEU C C N N 221 LEU O O N N 222 LEU CB C N N 223 LEU CG C N N 224 LEU CD1 C N N 225 LEU CD2 C N N 226 LEU OXT O N N 227 LEU H H N N 228 LEU H2 H N N 229 LEU HA H N N 230 LEU HB2 H N N 231 LEU HB3 H N N 232 LEU HG H N N 233 LEU HD11 H N N 234 LEU HD12 H N N 235 LEU HD13 H N N 236 LEU HD21 H N N 237 LEU HD22 H N N 238 LEU HD23 H N N 239 LEU HXT H N N 240 LYS N N N N 241 LYS CA C N S 242 LYS C C N N 243 LYS O O N N 244 LYS CB C N N 245 LYS CG C N N 246 LYS CD C N N 247 LYS CE C N N 248 LYS NZ N N N 249 LYS OXT O N N 250 LYS H H N N 251 LYS H2 H N N 252 LYS HA H N N 253 LYS HB2 H N N 254 LYS HB3 H N N 255 LYS HG2 H N N 256 LYS HG3 H N N 257 LYS HD2 H N N 258 LYS HD3 H N N 259 LYS HE2 H N N 260 LYS HE3 H N N 261 LYS HZ1 H N N 262 LYS HZ2 H N N 263 LYS HZ3 H N N 264 LYS HXT H N N 265 MET N N N N 266 MET CA C N S 267 MET C C N N 268 MET O O N N 269 MET CB C N N 270 MET CG C N N 271 MET SD S N N 272 MET CE C N N 273 MET OXT O N N 274 MET H H N N 275 MET H2 H N N 276 MET HA H N N 277 MET HB2 H N N 278 MET HB3 H N N 279 MET HG2 H N N 280 MET HG3 H N N 281 MET HE1 H N N 282 MET HE2 H N N 283 MET HE3 H N N 284 MET HXT H N N 285 ORP C1 C N S 286 ORP O1 O N N 287 ORP C2 C N N 288 ORP C3 C N S 289 ORP O3 O N N 290 ORP C4 C N R 291 ORP O4 O N N 292 ORP C5 C N N 293 ORP O5 O N N 294 ORP P P N N 295 ORP O1P O N N 296 ORP O2P O N N 297 ORP O3P O N N 298 ORP H1 H N N 299 ORP HO1 H N N 300 ORP H21 H N N 301 ORP H22 H N N 302 ORP H3 H N N 303 ORP HO3 H N N 304 ORP H4 H N N 305 ORP H51 H N N 306 ORP H52 H N N 307 ORP HOP2 H N N 308 ORP HOP3 H N N 309 PHE N N N N 310 PHE CA C N S 311 PHE C C N N 312 PHE O O N N 313 PHE CB C N N 314 PHE CG C Y N 315 PHE CD1 C Y N 316 PHE CD2 C Y N 317 PHE CE1 C Y N 318 PHE CE2 C Y N 319 PHE CZ C Y N 320 PHE OXT O N N 321 PHE H H N N 322 PHE H2 H N N 323 PHE HA H N N 324 PHE HB2 H N N 325 PHE HB3 H N N 326 PHE HD1 H N N 327 PHE HD2 H N N 328 PHE HE1 H N N 329 PHE HE2 H N N 330 PHE HZ H N N 331 PHE HXT H N N 332 PO4 P P N N 333 PO4 O1 O N N 334 PO4 O2 O N N 335 PO4 O3 O N N 336 PO4 O4 O N N 337 PRO N N N N 338 PRO CA C N S 339 PRO C C N N 340 PRO O O N N 341 PRO CB C N N 342 PRO CG C N N 343 PRO CD C N N 344 PRO OXT O N N 345 PRO H H N N 346 PRO HA H N N 347 PRO HB2 H N N 348 PRO HB3 H N N 349 PRO HG2 H N N 350 PRO HG3 H N N 351 PRO HD2 H N N 352 PRO HD3 H N N 353 PRO HXT H N N 354 SER N N N N 355 SER CA C N S 356 SER C C N N 357 SER O O N N 358 SER CB C N N 359 SER OG O N N 360 SER OXT O N N 361 SER H H N N 362 SER H2 H N N 363 SER HA H N N 364 SER HB2 H N N 365 SER HB3 H N N 366 SER HG H N N 367 SER HXT H N N 368 SF4 FE1 FE N N 369 SF4 FE2 FE N N 370 SF4 FE3 FE N N 371 SF4 FE4 FE N N 372 SF4 S1 S N N 373 SF4 S2 S N N 374 SF4 S3 S N N 375 SF4 S4 S N N 376 THR N N N N 377 THR CA C N S 378 THR C C N N 379 THR O O N N 380 THR CB C N R 381 THR OG1 O N N 382 THR CG2 C N N 383 THR OXT O N N 384 THR H H N N 385 THR H2 H N N 386 THR HA H N N 387 THR HB H N N 388 THR HG1 H N N 389 THR HG21 H N N 390 THR HG22 H N N 391 THR HG23 H N N 392 THR HXT H N N 393 TRP N N N N 394 TRP CA C N S 395 TRP C C N N 396 TRP O O N N 397 TRP CB C N N 398 TRP CG C Y N 399 TRP CD1 C Y N 400 TRP CD2 C Y N 401 TRP NE1 N Y N 402 TRP CE2 C Y N 403 TRP CE3 C Y N 404 TRP CZ2 C Y N 405 TRP CZ3 C Y N 406 TRP CH2 C Y N 407 TRP OXT O N N 408 TRP H H N N 409 TRP H2 H N N 410 TRP HA H N N 411 TRP HB2 H N N 412 TRP HB3 H N N 413 TRP HD1 H N N 414 TRP HE1 H N N 415 TRP HE3 H N N 416 TRP HZ2 H N N 417 TRP HZ3 H N N 418 TRP HH2 H N N 419 TRP HXT H N N 420 TYR N N N N 421 TYR CA C N S 422 TYR C C N N 423 TYR O O N N 424 TYR CB C N N 425 TYR CG C Y N 426 TYR CD1 C Y N 427 TYR CD2 C Y N 428 TYR CE1 C Y N 429 TYR CE2 C Y N 430 TYR CZ C Y N 431 TYR OH O N N 432 TYR OXT O N N 433 TYR H H N N 434 TYR H2 H N N 435 TYR HA H N N 436 TYR HB2 H N N 437 TYR HB3 H N N 438 TYR HD1 H N N 439 TYR HD2 H N N 440 TYR HE1 H N N 441 TYR HE2 H N N 442 TYR HH H N N 443 TYR HXT H N N 444 URA N1 N N N 445 URA C2 C N N 446 URA O2 O N N 447 URA N3 N N N 448 URA C4 C N N 449 URA O4 O N N 450 URA C5 C N N 451 URA C6 C N N 452 URA HN1 H N N 453 URA HN3 H N N 454 URA H5 H N N 455 URA H6 H N N 456 VAL N N N N 457 VAL CA C N S 458 VAL C C N N 459 VAL O O N N 460 VAL CB C N N 461 VAL CG1 C N N 462 VAL CG2 C N N 463 VAL OXT O N N 464 VAL H H N N 465 VAL H2 H N N 466 VAL HA H N N 467 VAL HB H N N 468 VAL HG11 H N N 469 VAL HG12 H N N 470 VAL HG13 H N N 471 VAL HG21 H N N 472 VAL HG22 H N N 473 VAL HG23 H N N 474 VAL HXT H N N 475 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DT OP3 P sing N N 83 DT OP3 HOP3 sing N N 84 DT P OP1 doub N N 85 DT P OP2 sing N N 86 DT P "O5'" sing N N 87 DT OP2 HOP2 sing N N 88 DT "O5'" "C5'" sing N N 89 DT "C5'" "C4'" sing N N 90 DT "C5'" "H5'" sing N N 91 DT "C5'" "H5''" sing N N 92 DT "C4'" "O4'" sing N N 93 DT "C4'" "C3'" sing N N 94 DT "C4'" "H4'" sing N N 95 DT "O4'" "C1'" sing N N 96 DT "C3'" "O3'" sing N N 97 DT "C3'" "C2'" sing N N 98 DT "C3'" "H3'" sing N N 99 DT "O3'" "HO3'" sing N N 100 DT "C2'" "C1'" sing N N 101 DT "C2'" "H2'" sing N N 102 DT "C2'" "H2''" sing N N 103 DT "C1'" N1 sing N N 104 DT "C1'" "H1'" sing N N 105 DT N1 C2 sing N N 106 DT N1 C6 sing N N 107 DT C2 O2 doub N N 108 DT C2 N3 sing N N 109 DT N3 C4 sing N N 110 DT N3 H3 sing N N 111 DT C4 O4 doub N N 112 DT C4 C5 sing N N 113 DT C5 C7 sing N N 114 DT C5 C6 doub N N 115 DT C7 H71 sing N N 116 DT C7 H72 sing N N 117 DT C7 H73 sing N N 118 DT C6 H6 sing N N 119 GLN N CA sing N N 120 GLN N H sing N N 121 GLN N H2 sing N N 122 GLN CA C sing N N 123 GLN CA CB sing N N 124 GLN CA HA sing N N 125 GLN C O doub N N 126 GLN C OXT sing N N 127 GLN CB CG sing N N 128 GLN CB HB2 sing N N 129 GLN CB HB3 sing N N 130 GLN CG CD sing N N 131 GLN CG HG2 sing N N 132 GLN CG HG3 sing N N 133 GLN CD OE1 doub N N 134 GLN CD NE2 sing N N 135 GLN NE2 HE21 sing N N 136 GLN NE2 HE22 sing N N 137 GLN OXT HXT sing N N 138 GLU N CA sing N N 139 GLU N H sing N N 140 GLU N H2 sing N N 141 GLU CA C sing N N 142 GLU CA CB sing N N 143 GLU CA HA sing N N 144 GLU C O doub N N 145 GLU C OXT sing N N 146 GLU CB CG sing N N 147 GLU CB HB2 sing N N 148 GLU CB HB3 sing N N 149 GLU CG CD sing N N 150 GLU CG HG2 sing N N 151 GLU CG HG3 sing N N 152 GLU CD OE1 doub N N 153 GLU CD OE2 sing N N 154 GLU OE2 HE2 sing N N 155 GLU OXT HXT sing N N 156 GLY N CA sing N N 157 GLY N H sing N N 158 GLY N H2 sing N N 159 GLY CA C sing N N 160 GLY CA HA2 sing N N 161 GLY CA HA3 sing N N 162 GLY C O doub N N 163 GLY C OXT sing N N 164 GLY OXT HXT sing N N 165 HIS N CA sing N N 166 HIS N H sing N N 167 HIS N H2 sing N N 168 HIS CA C sing N N 169 HIS CA CB sing N N 170 HIS CA HA sing N N 171 HIS C O doub N N 172 HIS C OXT sing N N 173 HIS CB CG sing N N 174 HIS CB HB2 sing N N 175 HIS CB HB3 sing N N 176 HIS CG ND1 sing Y N 177 HIS CG CD2 doub Y N 178 HIS ND1 CE1 doub Y N 179 HIS ND1 HD1 sing N N 180 HIS CD2 NE2 sing Y N 181 HIS CD2 HD2 sing N N 182 HIS CE1 NE2 sing Y N 183 HIS CE1 HE1 sing N N 184 HIS NE2 HE2 sing N N 185 HIS OXT HXT sing N N 186 HOH O H1 sing N N 187 HOH O H2 sing N N 188 ILE N CA sing N N 189 ILE N H sing N N 190 ILE N H2 sing N N 191 ILE CA C sing N N 192 ILE CA CB sing N N 193 ILE CA HA sing N N 194 ILE C O doub N N 195 ILE C OXT sing N N 196 ILE CB CG1 sing N N 197 ILE CB CG2 sing N N 198 ILE CB HB sing N N 199 ILE CG1 CD1 sing N N 200 ILE CG1 HG12 sing N N 201 ILE CG1 HG13 sing N N 202 ILE CG2 HG21 sing N N 203 ILE CG2 HG22 sing N N 204 ILE CG2 HG23 sing N N 205 ILE CD1 HD11 sing N N 206 ILE CD1 HD12 sing N N 207 ILE CD1 HD13 sing N N 208 ILE OXT HXT sing N N 209 LEU N CA sing N N 210 LEU N H sing N N 211 LEU N H2 sing N N 212 LEU CA C sing N N 213 LEU CA CB sing N N 214 LEU CA HA sing N N 215 LEU C O doub N N 216 LEU C OXT sing N N 217 LEU CB CG sing N N 218 LEU CB HB2 sing N N 219 LEU CB HB3 sing N N 220 LEU CG CD1 sing N N 221 LEU CG CD2 sing N N 222 LEU CG HG sing N N 223 LEU CD1 HD11 sing N N 224 LEU CD1 HD12 sing N N 225 LEU CD1 HD13 sing N N 226 LEU CD2 HD21 sing N N 227 LEU CD2 HD22 sing N N 228 LEU CD2 HD23 sing N N 229 LEU OXT HXT sing N N 230 LYS N CA sing N N 231 LYS N H sing N N 232 LYS N H2 sing N N 233 LYS CA C sing N N 234 LYS CA CB sing N N 235 LYS CA HA sing N N 236 LYS C O doub N N 237 LYS C OXT sing N N 238 LYS CB CG sing N N 239 LYS CB HB2 sing N N 240 LYS CB HB3 sing N N 241 LYS CG CD sing N N 242 LYS CG HG2 sing N N 243 LYS CG HG3 sing N N 244 LYS CD CE sing N N 245 LYS CD HD2 sing N N 246 LYS CD HD3 sing N N 247 LYS CE NZ sing N N 248 LYS CE HE2 sing N N 249 LYS CE HE3 sing N N 250 LYS NZ HZ1 sing N N 251 LYS NZ HZ2 sing N N 252 LYS NZ HZ3 sing N N 253 LYS OXT HXT sing N N 254 MET N CA sing N N 255 MET N H sing N N 256 MET N H2 sing N N 257 MET CA C sing N N 258 MET CA CB sing N N 259 MET CA HA sing N N 260 MET C O doub N N 261 MET C OXT sing N N 262 MET CB CG sing N N 263 MET CB HB2 sing N N 264 MET CB HB3 sing N N 265 MET CG SD sing N N 266 MET CG HG2 sing N N 267 MET CG HG3 sing N N 268 MET SD CE sing N N 269 MET CE HE1 sing N N 270 MET CE HE2 sing N N 271 MET CE HE3 sing N N 272 MET OXT HXT sing N N 273 ORP C1 O1 sing N N 274 ORP C1 C2 sing N N 275 ORP C1 O4 sing N N 276 ORP C1 H1 sing N N 277 ORP O1 HO1 sing N N 278 ORP C2 C3 sing N N 279 ORP C2 H21 sing N N 280 ORP C2 H22 sing N N 281 ORP C3 O3 sing N N 282 ORP C3 C4 sing N N 283 ORP C3 H3 sing N N 284 ORP O3 HO3 sing N N 285 ORP C4 O4 sing N N 286 ORP C4 C5 sing N N 287 ORP C4 H4 sing N N 288 ORP C5 O5 sing N N 289 ORP C5 H51 sing N N 290 ORP C5 H52 sing N N 291 ORP O5 P sing N N 292 ORP P O1P doub N N 293 ORP P O2P sing N N 294 ORP P O3P sing N N 295 ORP O2P HOP2 sing N N 296 ORP O3P HOP3 sing N N 297 PHE N CA sing N N 298 PHE N H sing N N 299 PHE N H2 sing N N 300 PHE CA C sing N N 301 PHE CA CB sing N N 302 PHE CA HA sing N N 303 PHE C O doub N N 304 PHE C OXT sing N N 305 PHE CB CG sing N N 306 PHE CB HB2 sing N N 307 PHE CB HB3 sing N N 308 PHE CG CD1 doub Y N 309 PHE CG CD2 sing Y N 310 PHE CD1 CE1 sing Y N 311 PHE CD1 HD1 sing N N 312 PHE CD2 CE2 doub Y N 313 PHE CD2 HD2 sing N N 314 PHE CE1 CZ doub Y N 315 PHE CE1 HE1 sing N N 316 PHE CE2 CZ sing Y N 317 PHE CE2 HE2 sing N N 318 PHE CZ HZ sing N N 319 PHE OXT HXT sing N N 320 PO4 P O1 doub N N 321 PO4 P O2 sing N N 322 PO4 P O3 sing N N 323 PO4 P O4 sing N N 324 PRO N CA sing N N 325 PRO N CD sing N N 326 PRO N H sing N N 327 PRO CA C sing N N 328 PRO CA CB sing N N 329 PRO CA HA sing N N 330 PRO C O doub N N 331 PRO C OXT sing N N 332 PRO CB CG sing N N 333 PRO CB HB2 sing N N 334 PRO CB HB3 sing N N 335 PRO CG CD sing N N 336 PRO CG HG2 sing N N 337 PRO CG HG3 sing N N 338 PRO CD HD2 sing N N 339 PRO CD HD3 sing N N 340 PRO OXT HXT sing N N 341 SER N CA sing N N 342 SER N H sing N N 343 SER N H2 sing N N 344 SER CA C sing N N 345 SER CA CB sing N N 346 SER CA HA sing N N 347 SER C O doub N N 348 SER C OXT sing N N 349 SER CB OG sing N N 350 SER CB HB2 sing N N 351 SER CB HB3 sing N N 352 SER OG HG sing N N 353 SER OXT HXT sing N N 354 SF4 FE1 S2 sing N N 355 SF4 FE1 S3 sing N N 356 SF4 FE1 S4 sing N N 357 SF4 FE2 S1 sing N N 358 SF4 FE2 S3 sing N N 359 SF4 FE2 S4 sing N N 360 SF4 FE3 S1 sing N N 361 SF4 FE3 S2 sing N N 362 SF4 FE3 S4 sing N N 363 SF4 FE4 S1 sing N N 364 SF4 FE4 S2 sing N N 365 SF4 FE4 S3 sing N N 366 THR N CA sing N N 367 THR N H sing N N 368 THR N H2 sing N N 369 THR CA C sing N N 370 THR CA CB sing N N 371 THR CA HA sing N N 372 THR C O doub N N 373 THR C OXT sing N N 374 THR CB OG1 sing N N 375 THR CB CG2 sing N N 376 THR CB HB sing N N 377 THR OG1 HG1 sing N N 378 THR CG2 HG21 sing N N 379 THR CG2 HG22 sing N N 380 THR CG2 HG23 sing N N 381 THR OXT HXT sing N N 382 TRP N CA sing N N 383 TRP N H sing N N 384 TRP N H2 sing N N 385 TRP CA C sing N N 386 TRP CA CB sing N N 387 TRP CA HA sing N N 388 TRP C O doub N N 389 TRP C OXT sing N N 390 TRP CB CG sing N N 391 TRP CB HB2 sing N N 392 TRP CB HB3 sing N N 393 TRP CG CD1 doub Y N 394 TRP CG CD2 sing Y N 395 TRP CD1 NE1 sing Y N 396 TRP CD1 HD1 sing N N 397 TRP CD2 CE2 doub Y N 398 TRP CD2 CE3 sing Y N 399 TRP NE1 CE2 sing Y N 400 TRP NE1 HE1 sing N N 401 TRP CE2 CZ2 sing Y N 402 TRP CE3 CZ3 doub Y N 403 TRP CE3 HE3 sing N N 404 TRP CZ2 CH2 doub Y N 405 TRP CZ2 HZ2 sing N N 406 TRP CZ3 CH2 sing Y N 407 TRP CZ3 HZ3 sing N N 408 TRP CH2 HH2 sing N N 409 TRP OXT HXT sing N N 410 TYR N CA sing N N 411 TYR N H sing N N 412 TYR N H2 sing N N 413 TYR CA C sing N N 414 TYR CA CB sing N N 415 TYR CA HA sing N N 416 TYR C O doub N N 417 TYR C OXT sing N N 418 TYR CB CG sing N N 419 TYR CB HB2 sing N N 420 TYR CB HB3 sing N N 421 TYR CG CD1 doub Y N 422 TYR CG CD2 sing Y N 423 TYR CD1 CE1 sing Y N 424 TYR CD1 HD1 sing N N 425 TYR CD2 CE2 doub Y N 426 TYR CD2 HD2 sing N N 427 TYR CE1 CZ doub Y N 428 TYR CE1 HE1 sing N N 429 TYR CE2 CZ sing Y N 430 TYR CE2 HE2 sing N N 431 TYR CZ OH sing N N 432 TYR OH HH sing N N 433 TYR OXT HXT sing N N 434 URA N1 C2 sing N N 435 URA N1 C6 sing N N 436 URA N1 HN1 sing N N 437 URA C2 O2 doub N N 438 URA C2 N3 sing N N 439 URA N3 C4 sing N N 440 URA N3 HN3 sing N N 441 URA C4 O4 doub N N 442 URA C4 C5 sing N N 443 URA C5 C6 doub N N 444 URA C5 H5 sing N N 445 URA C6 H6 sing N N 446 VAL N CA sing N N 447 VAL N H sing N N 448 VAL N H2 sing N N 449 VAL CA C sing N N 450 VAL CA CB sing N N 451 VAL CA HA sing N N 452 VAL C O doub N N 453 VAL C OXT sing N N 454 VAL CB CG1 sing N N 455 VAL CB CG2 sing N N 456 VAL CB HB sing N N 457 VAL CG1 HG11 sing N N 458 VAL CG1 HG12 sing N N 459 VAL CG1 HG13 sing N N 460 VAL CG2 HG21 sing N N 461 VAL CG2 HG22 sing N N 462 VAL CG2 HG23 sing N N 463 VAL OXT HXT sing N N 464 # _pdbx_audit_support.funding_organization 'National Research Foundation (Korea)' _pdbx_audit_support.country 'Korea, Republic Of' _pdbx_audit_support.grant_number NRF-2018R1A2A2A05021648 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_instance_feature.ordinal _pdbx_entity_instance_feature.comp_id _pdbx_entity_instance_feature.asym_id _pdbx_entity_instance_feature.seq_num _pdbx_entity_instance_feature.auth_comp_id _pdbx_entity_instance_feature.auth_asym_id _pdbx_entity_instance_feature.auth_seq_num _pdbx_entity_instance_feature.feature_type _pdbx_entity_instance_feature.details 1 ORP ? ? ORP ? ? 'SUBJECT OF INVESTIGATION' ? 2 URA ? ? URA ? ? 'SUBJECT OF INVESTIGATION' ? # _atom_sites.entry_id 6AJO _atom_sites.fract_transf_matrix[1][1] 0.027153 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015516 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012063 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C FE H N O P S # loop_