HEADER OXIDOREDUCTASE 08-AUG-17 6ALQ TITLE VIOC L-ARGININE HYDROXYLASE BOUND TO FE(II), L-ARGININE, AND SUCCINATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALPHA-KETOGLUTARATE-DEPENDENT L-ARGININE HYDROXYLASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: VIOMYCIN BIOSYNTHESIS PROTEIN C; COMPND 5 EC: 1.14.11.41; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES VINACEUS; SOURCE 3 ORGANISM_TAXID: 1960; SOURCE 4 GENE: VIOC; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HYDROXYLASE, 2-OXO-GLUTARATE, IRON, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR N.P.DUNHAM,A.J.MITCHELL,A.K.BOAL REVDAT 5 13-MAR-24 6ALQ 1 REMARK REVDAT 4 01-JAN-20 6ALQ 1 REMARK REVDAT 3 11-OCT-17 6ALQ 1 JRNL REVDAT 2 27-SEP-17 6ALQ 1 REMARK REVDAT 1 06-SEP-17 6ALQ 0 JRNL AUTH A.J.MITCHELL,N.P.DUNHAM,R.J.MARTINIE,J.A.BERGMAN, JRNL AUTH 2 C.J.POLLOCK,K.HU,B.D.ALLEN,W.C.CHANG,A.SILAKOV, JRNL AUTH 3 J.M.BOLLINGER,C.KREBS,A.K.BOAL JRNL TITL VISUALIZING THE REACTION CYCLE IN AN IRON(II)- AND JRNL TITL 2 2-(OXO)-GLUTARATE-DEPENDENT HYDROXYLASE. JRNL REF J. AM. CHEM. SOC. V. 139 13830 2017 JRNL REFN ESSN 1520-5126 JRNL PMID 28823155 JRNL DOI 10.1021/JACS.7B07374 REMARK 2 REMARK 2 RESOLUTION. 1.67 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.67 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.10 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 34539 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.182 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1834 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.67 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.71 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2537 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.74 REMARK 3 BIN R VALUE (WORKING SET) : 0.2610 REMARK 3 BIN FREE R VALUE SET COUNT : 152 REMARK 3 BIN FREE R VALUE : 0.2740 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2636 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 21 REMARK 3 SOLVENT ATOMS : 179 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.47 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.37000 REMARK 3 B22 (A**2) : 0.43000 REMARK 3 B33 (A**2) : 0.51000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -2.05000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.108 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.098 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.081 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.480 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.966 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.959 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2717 ; 0.005 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2576 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3693 ; 1.130 ; 1.956 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5877 ; 0.750 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 336 ; 5.768 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 138 ;35.521 ;21.957 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 421 ;12.584 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 38 ;14.133 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 400 ; 0.061 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3132 ; 0.003 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 670 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6ALQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1000229431. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-OCT-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0331 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS EIGER X 16M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36373 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.480 REMARK 200 RESOLUTION RANGE LOW (A) : 29.097 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 83.5 REMARK 200 DATA REDUNDANCY : 1.729 REMARK 200 R MERGE (I) : 0.03200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.3600 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.48 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.57 REMARK 200 COMPLETENESS FOR SHELL (%) : 40.4 REMARK 200 DATA REDUNDANCY IN SHELL : 1.33 REMARK 200 R MERGE FOR SHELL (I) : 0.96900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.760 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.52 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0 M SUCCINIC ACID, 0.1 M TRIS PH REMARK 280 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 40.42200 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.37550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 40.42200 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 33.37550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -34.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -35 REMARK 465 GLY A -34 REMARK 465 SER A -33 REMARK 465 SER A -32 REMARK 465 HIS A -31 REMARK 465 HIS A -30 REMARK 465 HIS A -29 REMARK 465 HIS A -28 REMARK 465 HIS A -27 REMARK 465 HIS A -26 REMARK 465 SER A -25 REMARK 465 SER A -24 REMARK 465 GLY A -23 REMARK 465 LEU A -22 REMARK 465 VAL A -21 REMARK 465 PRO A -20 REMARK 465 ARG A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 HIS A -16 REMARK 465 MET A -15 REMARK 465 ALA A -14 REMARK 465 SER A -13 REMARK 465 MET A -12 REMARK 465 THR A -11 REMARK 465 GLY A -10 REMARK 465 GLY A -9 REMARK 465 GLN A -8 REMARK 465 GLN A -7 REMARK 465 MET A -6 REMARK 465 GLY A -5 REMARK 465 ARG A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 GLU A -1 REMARK 465 PHE A 0 REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 GLU A 3 REMARK 465 SER A 4 REMARK 465 PRO A 5 REMARK 465 THR A 6 REMARK 465 THR A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 GLY A 10 REMARK 465 ALA A 11 REMARK 465 ALA A 12 REMARK 465 PRO A 13 REMARK 465 PRO A 14 REMARK 465 ASP A 15 REMARK 465 SER A 16 REMARK 465 VAL A 17 REMARK 465 ALA A 18 REMARK 465 THR A 19 REMARK 465 PRO A 20 REMARK 465 VAL A 21 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 69 NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 161 -68.52 -149.78 REMARK 500 ASN A 188 62.64 -161.19 REMARK 500 ALA A 233 -0.65 70.32 REMARK 500 GLN A 235 -49.02 131.74 REMARK 500 ALA A 262 68.41 -158.38 REMARK 500 TRP A 348 96.18 -60.30 REMARK 500 ASP A 351 -94.66 -114.40 REMARK 500 ARG A 353 -13.60 94.74 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE2 A 401 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 168 NE2 REMARK 620 2 GLU A 170 OE1 93.9 REMARK 620 3 HIS A 316 NE2 97.8 92.6 REMARK 620 4 SIN A 402 O3 147.7 113.9 97.0 REMARK 620 5 SIN A 402 O4 93.9 171.4 89.9 57.6 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE2 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SIN A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ARG A 403 DBREF 6ALQ A 1 358 UNP Q6WZB0 ARGHX_STRVI 1 358 SEQADV 6ALQ MET A -35 UNP Q6WZB0 INITIATING METHIONINE SEQADV 6ALQ GLY A -34 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ SER A -33 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ SER A -32 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ HIS A -31 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ HIS A -30 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ HIS A -29 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ HIS A -28 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ HIS A -27 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ HIS A -26 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ SER A -25 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ SER A -24 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ GLY A -23 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ LEU A -22 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ VAL A -21 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ PRO A -20 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ ARG A -19 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ GLY A -18 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ SER A -17 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ HIS A -16 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ MET A -15 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ ALA A -14 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ SER A -13 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ MET A -12 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ THR A -11 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ GLY A -10 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ GLY A -9 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ GLN A -8 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ GLN A -7 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ MET A -6 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ GLY A -5 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ ARG A -4 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ GLY A -3 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ SER A -2 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ GLU A -1 UNP Q6WZB0 EXPRESSION TAG SEQADV 6ALQ PHE A 0 UNP Q6WZB0 EXPRESSION TAG SEQRES 1 A 394 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 394 LEU VAL PRO ARG GLY SER HIS MET ALA SER MET THR GLY SEQRES 3 A 394 GLY GLN GLN MET GLY ARG GLY SER GLU PHE MET THR GLU SEQRES 4 A 394 SER PRO THR THR HIS HIS GLY ALA ALA PRO PRO ASP SER SEQRES 5 A 394 VAL ALA THR PRO VAL ARG PRO TRP SER GLU PHE ARG LEU SEQRES 6 A 394 THR PRO ALA GLU ALA ALA ALA ALA ALA ALA LEU ALA ALA SEQRES 7 A 394 ARG CYS ALA GLN ARG TYR ASP GLU THR ASP GLY PRO GLU SEQRES 8 A 394 PHE LEU LEU ASP ALA PRO VAL ILE ALA HIS GLU LEU PRO SEQRES 9 A 394 ARG ARG LEU ARG THR PHE MET ALA ARG ALA ARG LEU ASP SEQRES 10 A 394 ALA TRP PRO HIS ALA LEU VAL VAL ARG GLY ASN PRO VAL SEQRES 11 A 394 ASP ASP ALA ALA LEU GLY SER THR PRO VAL HIS TRP ARG SEQRES 12 A 394 THR ALA ARG THR PRO GLY SER ARG PRO LEU SER PHE LEU SEQRES 13 A 394 LEU MET LEU TYR ALA GLY LEU LEU GLY ASP VAL PHE GLY SEQRES 14 A 394 TRP ALA THR GLN GLN ASP GLY ARG VAL VAL THR ASP VAL SEQRES 15 A 394 LEU PRO ILE LYS GLY GLY GLU HIS THR LEU VAL SER SER SEQRES 16 A 394 SER SER ARG GLN GLU LEU GLY TRP HIS THR GLU ASP ALA SEQRES 17 A 394 PHE SER PRO TYR ARG ALA ASP TYR VAL GLY LEU LEU SER SEQRES 18 A 394 LEU ARG ASN PRO ASP GLY VAL ALA THR THR LEU ALA GLY SEQRES 19 A 394 VAL PRO LEU ASP ASP LEU ASP GLU ARG THR LEU ASP VAL SEQRES 20 A 394 LEU PHE GLN GLU ARG PHE LEU ILE ARG PRO ASP ASP SER SEQRES 21 A 394 HIS LEU GLN VAL ASN ASN SER THR ALA GLN GLN GLY ARG SEQRES 22 A 394 VAL GLU PHE GLU GLY ILE ALA GLN ALA ALA ASP ARG PRO SEQRES 23 A 394 GLU PRO VAL ALA ILE LEU THR GLY HIS ARG ALA ALA PRO SEQRES 24 A 394 HIS LEU ARG VAL ASP GLY ASP PHE SER ALA PRO ALA GLU SEQRES 25 A 394 GLY ASP GLU GLU ALA ALA ALA ALA LEU GLY THR LEU ARG SEQRES 26 A 394 LYS LEU ILE ASP ALA SER LEU TYR GLU LEU VAL LEU ASP SEQRES 27 A 394 GLN GLY ASP VAL ALA PHE ILE ASP ASN ARG ARG ALA VAL SEQRES 28 A 394 HIS GLY ARG ARG ALA PHE GLN PRO ARG TYR ASP GLY ARG SEQRES 29 A 394 ASP ARG TRP LEU LYS ARG ILE ASN ILE THR ARG ASP LEU SEQRES 30 A 394 HIS ARG SER ARG LYS ALA TRP ALA GLY ASP SER ARG VAL SEQRES 31 A 394 LEU GLY GLN ARG HET FE2 A 401 1 HET SIN A 402 8 HET ARG A 403 12 HETNAM FE2 FE (II) ION HETNAM SIN SUCCINIC ACID HETNAM ARG ARGININE FORMUL 2 FE2 FE 2+ FORMUL 3 SIN C4 H6 O4 FORMUL 4 ARG C6 H15 N4 O2 1+ FORMUL 5 HOH *179(H2 O) HELIX 1 AA1 THR A 30 TYR A 48 1 19 HELIX 2 AA2 GLY A 53 ALA A 64 1 12 HELIX 3 AA3 HIS A 65 LEU A 67 5 3 HELIX 4 AA4 PRO A 68 ARG A 79 1 12 HELIX 5 AA5 ASP A 95 GLY A 100 1 6 HELIX 6 AA6 HIS A 105 ALA A 109 5 5 HELIX 7 AA7 SER A 114 LEU A 127 1 14 HELIX 8 AA8 GLN A 137 ARG A 141 5 5 HELIX 9 AA9 ASP A 205 PHE A 213 1 9 HELIX 10 AB1 ASP A 222 ASN A 230 5 9 HELIX 11 AB2 VAL A 238 ARG A 249 1 12 HELIX 12 AB3 ASP A 278 LEU A 296 1 19 HELIX 13 AB4 ASP A 340 TRP A 348 5 9 SHEET 1 AA1 6 SER A 25 ARG A 28 0 SHEET 2 AA1 6 ALA A 86 ARG A 90 1 O VAL A 88 N SER A 25 SHEET 3 AA1 6 VAL A 306 ASP A 310 -1 O VAL A 306 N VAL A 89 SHEET 4 AA1 6 TYR A 180 ARG A 187 -1 N LEU A 183 O ALA A 307 SHEET 5 AA1 6 TRP A 331 THR A 338 -1 O LYS A 333 N LEU A 184 SHEET 6 AA1 6 THR A 144 VAL A 146 -1 N THR A 144 O ARG A 334 SHEET 1 AA2 7 SER A 25 ARG A 28 0 SHEET 2 AA2 7 ALA A 86 ARG A 90 1 O VAL A 88 N SER A 25 SHEET 3 AA2 7 VAL A 306 ASP A 310 -1 O VAL A 306 N VAL A 89 SHEET 4 AA2 7 TYR A 180 ARG A 187 -1 N LEU A 183 O ALA A 307 SHEET 5 AA2 7 TRP A 331 THR A 338 -1 O LYS A 333 N LEU A 184 SHEET 6 AA2 7 ASP A 130 TRP A 134 -1 N ASP A 130 O THR A 338 SHEET 7 AA2 7 VAL A 354 LEU A 355 1 O LEU A 355 N GLY A 133 SHEET 1 AA3 4 LEU A 165 HIS A 168 0 SHEET 2 AA3 4 ALA A 314 ARG A 318 -1 O ARG A 318 N LEU A 165 SHEET 3 AA3 4 ALA A 193 GLY A 198 -1 N ALA A 197 O VAL A 315 SHEET 4 AA3 4 TYR A 297 VAL A 300 -1 O LEU A 299 N THR A 194 SHEET 1 AA4 2 PHE A 217 ILE A 219 0 SHEET 2 AA4 2 SER A 272 PRO A 274 -1 O ALA A 273 N LEU A 218 SHEET 1 AA5 2 LEU A 256 HIS A 259 0 SHEET 2 AA5 2 ALA A 262 LEU A 265 -1 O HIS A 264 N THR A 257 LINK NE2 HIS A 168 FE FE2 A 401 1555 1555 2.28 LINK OE1 GLU A 170 FE FE2 A 401 1555 1555 2.05 LINK NE2 HIS A 316 FE FE2 A 401 1555 1555 2.20 LINK FE FE2 A 401 O3 SIN A 402 1555 1555 2.33 LINK FE FE2 A 401 O4 SIN A 402 1555 1555 2.17 CISPEP 1 GLN A 234 GLN A 235 0 20.04 CISPEP 2 ASP A 351 SER A 352 0 3.63 SITE 1 AC1 4 HIS A 168 GLU A 170 HIS A 316 SIN A 402 SITE 1 AC2 12 VAL A 146 LEU A 165 HIS A 168 GLU A 170 SITE 2 AC2 12 THR A 194 HIS A 316 ARG A 318 ARG A 330 SITE 3 AC2 12 LEU A 332 ARG A 334 FE2 A 401 HOH A 542 SITE 1 AC3 14 GLN A 137 LEU A 156 VAL A 157 SER A 158 SITE 2 AC3 14 LEU A 165 HIS A 168 GLU A 170 ASP A 222 SITE 3 AC3 14 SER A 224 ASP A 268 ASP A 270 ARG A 334 SITE 4 AC3 14 HOH A 573 HOH A 640 CRYST1 80.844 66.751 62.922 90.00 109.27 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012370 0.000000 0.004325 0.00000 SCALE2 0.000000 0.014981 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016836 0.00000