HEADER DE NOVO PROTEIN 13-AUG-17 6ANF TITLE DESIGN OF A SHORT THERMO-STABLE ALPHA-HELIX EMBEDDED IN A MACROCYCLE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPPED-STRAPPED PEPTIDE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 4 ORGANISM_TAXID: 32630 KEYWDS DE NOVO, CONSTRAINED PEPTIDE, DE NOVO PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR H.WU,A.ACHARYYA,Y.WU,L.LIU,H.JO,F.GAI,W.F.DEGRADO REVDAT 3 14-JUN-23 6ANF 1 REMARK LINK REVDAT 2 16-MAY-18 6ANF 1 JRNL REVDAT 1 21-FEB-18 6ANF 0 JRNL AUTH H.WU,A.ACHARYYA,Y.WU,L.LIU,H.JO,F.GAI,W.F.DEGRADO JRNL TITL DESIGN OF A SHORT THERMALLY STABLE ALPHA-HELIX EMBEDDED IN A JRNL TITL 2 MACROCYCLE. JRNL REF CHEMBIOCHEM V. 19 902 2018 JRNL REFN ESSN 1439-7633 JRNL PMID 29417711 JRNL DOI 10.1002/CBIC.201800026 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR NIH REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6ANF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1000229504. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 4.1 REMARK 210 IONIC STRENGTH : 100 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 0.156 MM CAPPED-STRAPPED PEPTIDE REMARK 210 A37, 95% H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H NOESY; 2D 1H-1H TOCSY; REMARK 210 2D 1H-13C HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 900 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE II REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : X-PLOR NIH, SPARKY, CYANA, TALOS REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residues B0I A 101 and H00 A 1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 30333 RELATED DB: BMRB REMARK 900 DESIGN OF A SHORT THERMO-STABLE ALPHA-HELIX EMBEDDED IN A MACROCYCLE DBREF 6ANF A 1 14 PDB 6ANF 6ANF 1 14 SEQRES 1 A 15 H00 THR PRO ARG GLN ALA ARG ALA ALA ARG ALA ALA DAL SEQRES 2 A 15 CYS NH2 HET H00 A 1 12 HET DAL A 13 10 HET NH2 A 15 3 HET B0I A 101 26 HETNAM H00 4-SULFANYLBUTANOIC ACID HETNAM DAL D-ALANINE HETNAM NH2 AMINO GROUP HETNAM B0I 3,3'-DIMETHYL-1,1'-BIPHENYL FORMUL 1 H00 C4 H8 O2 S FORMUL 1 DAL C3 H7 N O2 FORMUL 1 NH2 H2 N FORMUL 2 B0I C14 H14 HELIX 1 AA1 THR A 2 DAL A 13 1 12 LINK C H00 A 1 N THR A 2 1555 1555 1.32 LINK SD H00 A 1 CB1 B0I A 101 1555 1555 1.81 LINK C ALA A 12 N DAL A 13 1555 1555 1.32 LINK C DAL A 13 N CYS A 14 1555 1555 1.32 LINK C CYS A 14 N NH2 A 15 1555 1555 1.32 LINK SG CYS A 14 CB2 B0I A 101 1555 1555 1.81 SITE 1 AC1 5 THR A 2 GLN A 5 ALA A 6 ALA A 9 SITE 2 AC1 5 CYS A 14 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1 HETATM 1 CA H00 A 1 2.092 -7.092 0.234 1.00 0.00 C HETATM 2 CB H00 A 1 0.759 -6.852 0.924 1.00 0.00 C HETATM 3 CG H00 A 1 0.000 -5.700 0.285 1.00 0.00 C HETATM 4 SD H00 A 1 -1.639 -6.183 -0.293 1.00 0.00 S HETATM 5 C H00 A 1 3.178 -6.249 0.874 1.00 0.00 C HETATM 6 O H00 A 1 3.445 -6.371 2.076 1.00 0.00 O HETATM 7 HA1 H00 A 1 2.353 -8.137 0.325 1.00 0.00 H HETATM 8 HA2 H00 A 1 2.007 -6.832 -0.811 1.00 0.00 H HETATM 9 HB1 H00 A 1 0.940 -6.621 1.964 1.00 0.00 H HETATM 10 HB2 H00 A 1 0.159 -7.747 0.848 1.00 0.00 H HETATM 11 HG1 H00 A 1 0.570 -5.333 -0.556 1.00 0.00 H HETATM 12 HG2 H00 A 1 -0.112 -4.911 1.016 1.00 0.00 H