HEADER VIRAL PROTEIN 16-AUG-17 6AOP TITLE CRYSTAL STRUCTURE OF THE A/BRISBANE/10/2007 (H3N2) INFLUENZA VIRUS TITLE 2 HEMAGGLUTININ L194P MUTANT APO FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMAGGLUTININ HA1 CHAIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: HEMAGGLUTININ HA2 CHAIN; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS (A/BRISBANE/10/2007(H3N2)); SOURCE 3 ORGANISM_TAXID: 476294; SOURCE 4 STRAIN: A/BRISBANE/10/2007(H3N2); SOURCE 5 GENE: HA; SOURCE 6 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7111; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS (A/BRISBANE/10/2007(H3N2)); SOURCE 10 ORGANISM_TAXID: 476294; SOURCE 11 STRAIN: A/BRISBANE/10/2007(H3N2); SOURCE 12 GENE: HA; SOURCE 13 EXPRESSION_SYSTEM: TRICHOPLUSIA NI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 7111 KEYWDS INFLUENZA A VIRUS, HEMAGGLUTININ, MUTANT, RECEPTOR BINDING, KEYWDS 2 ANTIGENICITY, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR N.C.WU,I.A.WILSON REVDAT 5 04-OCT-23 6AOP 1 HETSYN LINK REVDAT 4 29-JUL-20 6AOP 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE ATOM REVDAT 3 11-DEC-19 6AOP 1 REMARK REVDAT 2 08-NOV-17 6AOP 1 JRNL REVDAT 1 18-OCT-17 6AOP 0 JRNL AUTH N.C.WU,S.J.ZOST,A.J.THOMPSON,D.OYEN,C.M.NYCHOLAT,R.MCBRIDE, JRNL AUTH 2 J.C.PAULSON,S.E.HENSLEY,I.A.WILSON JRNL TITL A STRUCTURAL EXPLANATION FOR THE LOW EFFECTIVENESS OF THE JRNL TITL 2 SEASONAL INFLUENZA H3N2 VACCINE. JRNL REF PLOS PATHOG. V. 13 06682 2017 JRNL REFN ESSN 1553-7374 JRNL PMID 29059230 JRNL DOI 10.1371/JOURNAL.PPAT.1006682 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 32293 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1754 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.29 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.35 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2156 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 90.60 REMARK 3 BIN R VALUE (WORKING SET) : 0.3040 REMARK 3 BIN FREE R VALUE SET COUNT : 109 REMARK 3 BIN FREE R VALUE : 0.2820 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3866 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 184 REMARK 3 SOLVENT ATOMS : 164 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.14000 REMARK 3 B22 (A**2) : 1.14000 REMARK 3 B33 (A**2) : -3.70000 REMARK 3 B12 (A**2) : 0.57000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.244 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.197 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.172 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.575 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4225 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3753 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5769 ; 1.530 ; 1.992 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8797 ; 0.944 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 512 ; 6.405 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 201 ;36.982 ;24.876 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 693 ;14.188 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;14.084 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 659 ; 0.083 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4631 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 820 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1985 ; 1.335 ; 3.649 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1984 ; 1.335 ; 3.648 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2485 ; 2.292 ; 5.466 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2486 ; 2.292 ; 5.467 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2240 ; 2.087 ; 4.346 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2241 ; 2.087 ; 4.348 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3274 ; 3.634 ; 6.462 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 16394 ; 7.075 ;72.541 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 16320 ; 7.059 ;72.466 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 9 A 154 REMARK 3 ORIGIN FOR THE GROUP (A): 28.4670 -35.0450 -65.7431 REMARK 3 T TENSOR REMARK 3 T11: 0.0945 T22: 0.1814 REMARK 3 T33: 0.2056 T12: -0.0161 REMARK 3 T13: -0.0955 T23: 0.0495 REMARK 3 L TENSOR REMARK 3 L11: 0.4564 L22: 0.3379 REMARK 3 L33: 2.5675 L12: 0.0056 REMARK 3 L13: 0.2725 L23: -0.0655 REMARK 3 S TENSOR REMARK 3 S11: 0.0943 S12: 0.1586 S13: -0.0569 REMARK 3 S21: -0.1475 S22: 0.0892 S23: 0.1819 REMARK 3 S31: 0.0493 S32: -0.3368 S33: -0.1834 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 155 A 207 REMARK 3 ORIGIN FOR THE GROUP (A): 33.1768 -24.2958 -96.1365 REMARK 3 T TENSOR REMARK 3 T11: 0.5612 T22: 0.4277 REMARK 3 T33: 0.1040 T12: 0.0432 REMARK 3 T13: -0.1117 T23: 0.1075 REMARK 3 L TENSOR REMARK 3 L11: 2.8357 L22: 2.8123 REMARK 3 L33: 0.9182 L12: 0.0494 REMARK 3 L13: 0.4466 L23: -1.1859 REMARK 3 S TENSOR REMARK 3 S11: 0.1862 S12: 0.6439 S13: -0.0234 REMARK 3 S21: -0.8591 S22: -0.0114 S23: 0.3036 REMARK 3 S31: 0.1521 S32: 0.0744 S33: -0.1748 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 208 A 325 REMARK 3 ORIGIN FOR THE GROUP (A): 33.9570 -32.6399 -67.7687 REMARK 3 T TENSOR REMARK 3 T11: 0.1389 T22: 0.1945 REMARK 3 T33: 0.1961 T12: 0.0027 REMARK 3 T13: -0.0664 T23: 0.0507 REMARK 3 L TENSOR REMARK 3 L11: 0.4895 L22: 0.4529 REMARK 3 L33: 2.0863 L12: -0.0107 REMARK 3 L13: 0.2807 L23: -0.2962 REMARK 3 S TENSOR REMARK 3 S11: 0.0889 S12: 0.2094 S13: -0.0041 REMARK 3 S21: -0.1478 S22: 0.0420 S23: 0.1391 REMARK 3 S31: -0.0111 S32: -0.0817 S33: -0.1309 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 123 REMARK 3 ORIGIN FOR THE GROUP (A): 39.7038 -34.6626 -31.8277 REMARK 3 T TENSOR REMARK 3 T11: 0.1247 T22: 0.1355 REMARK 3 T33: 0.2333 T12: -0.0263 REMARK 3 T13: -0.0031 T23: 0.0203 REMARK 3 L TENSOR REMARK 3 L11: 0.3818 L22: 0.1857 REMARK 3 L33: 3.4501 L12: 0.0153 REMARK 3 L13: -0.5361 L23: -0.1297 REMARK 3 S TENSOR REMARK 3 S11: 0.0307 S12: 0.0063 S13: -0.0585 REMARK 3 S21: -0.0091 S22: 0.0147 S23: 0.0719 REMARK 3 S31: 0.0063 S32: -0.1905 S33: -0.0454 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 124 B 173 REMARK 3 ORIGIN FOR THE GROUP (A): 38.0602 -31.6816 6.0849 REMARK 3 T TENSOR REMARK 3 T11: 0.1677 T22: 0.1998 REMARK 3 T33: 0.1849 T12: -0.0198 REMARK 3 T13: 0.0604 T23: 0.0329 REMARK 3 L TENSOR REMARK 3 L11: 3.6797 L22: 2.7164 REMARK 3 L33: 3.0457 L12: 0.2027 REMARK 3 L13: 0.1496 L23: 1.2148 REMARK 3 S TENSOR REMARK 3 S11: -0.0255 S12: -0.3752 S13: 0.0355 REMARK 3 S21: 0.2643 S22: 0.0324 S23: 0.0693 REMARK 3 S31: 0.1138 S32: -0.0373 S33: -0.0069 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6AOP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1000229423. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-NOV-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 10.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0332 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 712 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34068 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 16.20 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.10000 REMARK 200 FOR THE DATA SET : 31.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.37 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.9 REMARK 200 DATA REDUNDANCY IN SHELL : 9.00 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.70000 REMARK 200 FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.6 REMARK 200 STARTING MODEL: 4O5N REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.33 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CAPS PH 10.5 AND 29% PEG 400, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 50.24550 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 29.00925 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 127.77300 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 50.24550 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 29.00925 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 127.77300 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 50.24550 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 29.00925 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 127.77300 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 50.24550 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 29.00925 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 127.77300 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 50.24550 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 29.00925 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 127.77300 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 50.24550 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 29.00925 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 127.77300 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 58.01851 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 255.54600 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 58.01851 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 255.54600 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 58.01851 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 255.54600 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 58.01851 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 255.54600 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 58.01851 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 255.54600 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 58.01851 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 255.54600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 41490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 62500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 50.24550 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 -87.02776 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 100.49100 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 387 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 7 REMARK 465 ASP A 8 REMARK 465 LYS A 326 REMARK 465 GLN A 327 REMARK 465 THR A 328 REMARK 465 ARG A 329 REMARK 465 LYS B 174 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 22 75.78 -113.17 REMARK 500 GLU A 62 -110.88 57.95 REMARK 500 ASN A 96 56.36 -144.96 REMARK 500 CYS A 97 -150.95 -152.03 REMARK 500 TRP A 127 48.20 -99.72 REMARK 500 SER A 143 -17.92 66.88 REMARK 500 ASN A 165 83.04 -153.56 REMARK 500 ASN A 225 -4.09 69.05 REMARK 500 SER A 266 -169.82 -163.75 REMARK 500 ALA B 5 -65.84 -92.18 REMARK 500 PHE B 63 -120.61 -122.70 REMARK 500 GLN B 65 -135.09 -129.95 REMARK 500 GLN B 65 -134.27 -130.75 REMARK 500 ARG B 127 -122.95 54.73 REMARK 500 TYR B 141 40.25 -94.22 REMARK 500 PHE B 171 47.18 -104.38 REMARK 500 REMARK 500 REMARK: NULL DBREF 6AOP A 11 329 UNP I6UCL3 I6UCL3_9INFA 11 329 DBREF 6AOP B 1 174 UNP A8W891 A8W891_9INFA 330 503 SEQADV 6AOP ALA A 7 UNP I6UCL3 EXPRESSION TAG SEQADV 6AOP ASP A 8 UNP I6UCL3 EXPRESSION TAG SEQADV 6AOP PRO A 9 UNP I6UCL3 EXPRESSION TAG SEQADV 6AOP GLY A 10 UNP I6UCL3 EXPRESSION TAG SEQRES 1 A 323 ALA ASP PRO GLY ALA THR LEU CYS LEU GLY HIS HIS ALA SEQRES 2 A 323 VAL PRO ASN GLY THR ILE VAL LYS THR ILE THR ASN ASP SEQRES 3 A 323 GLN ILE GLU VAL THR ASN ALA THR GLU LEU VAL GLN SER SEQRES 4 A 323 SER SER THR GLY GLU ILE CYS ASP SER PRO HIS GLN ILE SEQRES 5 A 323 LEU ASP GLY GLU ASN CYS THR LEU ILE ASP ALA LEU LEU SEQRES 6 A 323 GLY ASP PRO GLN CYS ASP GLY PHE GLN ASN LYS LYS TRP SEQRES 7 A 323 ASP LEU PHE VAL GLU ARG SER LYS ALA TYR SER ASN CYS SEQRES 8 A 323 TYR PRO TYR ASP VAL PRO ASP TYR ALA SER LEU ARG SER SEQRES 9 A 323 LEU VAL ALA SER SER GLY THR LEU GLU PHE ASN ASN GLU SEQRES 10 A 323 SER PHE ASN TRP THR GLY VAL THR GLN ASN GLY THR SER SEQRES 11 A 323 SER ALA CYS ILE ARG ARG SER ASN ASN SER PHE PHE SER SEQRES 12 A 323 ARG LEU ASN TRP LEU THR HIS LEU LYS PHE LYS TYR PRO SEQRES 13 A 323 ALA LEU ASN VAL THR MET PRO ASN ASN GLU LYS PHE ASP SEQRES 14 A 323 LYS LEU TYR ILE TRP GLY VAL HIS HIS PRO GLY THR ASP SEQRES 15 A 323 ASN ASP GLN ILE PHE PRO TYR ALA GLN ALA SER GLY ARG SEQRES 16 A 323 ILE THR VAL SER THR LYS ARG SER GLN GLN THR VAL ILE SEQRES 17 A 323 PRO ASN ILE GLY SER ARG PRO ARG VAL ARG ASN ILE PRO SEQRES 18 A 323 SER ARG ILE SER ILE TYR TRP THR ILE VAL LYS PRO GLY SEQRES 19 A 323 ASP ILE LEU LEU ILE ASN SER THR GLY ASN LEU ILE ALA SEQRES 20 A 323 PRO ARG GLY TYR PHE LYS ILE ARG SER GLY LYS SER SER SEQRES 21 A 323 ILE MET ARG SER ASP ALA PRO ILE GLY LYS CYS ASN SER SEQRES 22 A 323 GLU CYS ILE THR PRO ASN GLY SER ILE PRO ASN ASP LYS SEQRES 23 A 323 PRO PHE GLN ASN VAL ASN ARG ILE THR TYR GLY ALA CYS SEQRES 24 A 323 PRO ARG TYR VAL LYS GLN ASN THR LEU LYS LEU ALA THR SEQRES 25 A 323 GLY MET ARG ASN VAL PRO GLU LYS GLN THR ARG SEQRES 1 B 174 GLY ILE PHE GLY ALA ILE ALA GLY PHE ILE GLU ASN GLY SEQRES 2 B 174 TRP GLU GLY MET VAL ASP GLY TRP TYR GLY PHE ARG HIS SEQRES 3 B 174 GLN ASN SER GLU GLY ILE GLY GLN ALA ALA ASP LEU LYS SEQRES 4 B 174 SER THR GLN ALA ALA ILE ASP GLN ILE ASN GLY LYS LEU SEQRES 5 B 174 ASN ARG LEU ILE GLY LYS THR ASN GLU LYS PHE HIS GLN SEQRES 6 B 174 ILE GLU LYS GLU PHE SER GLU VAL GLU GLY ARG ILE GLN SEQRES 7 B 174 ASP LEU GLU LYS TYR VAL GLU ASP THR LYS ILE ASP LEU SEQRES 8 B 174 TRP SER TYR ASN ALA GLU LEU LEU VAL ALA LEU GLU ASN SEQRES 9 B 174 GLN HIS THR ILE ASP LEU THR ASP SER GLU MET ASN LYS SEQRES 10 B 174 LEU PHE GLU LYS THR LYS LYS GLN LEU ARG GLU ASN ALA SEQRES 11 B 174 GLU ASP MET GLY ASN GLY CYS PHE LYS ILE TYR HIS LYS SEQRES 12 B 174 CYS ASP ASN ALA CYS ILE GLY SER ILE ARG ASN GLY THR SEQRES 13 B 174 TYR ASP HIS ASP VAL TYR ARG ASP GLU ALA LEU ASN ASN SEQRES 14 B 174 ARG PHE GLN ILE LYS HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET MAN C 4 11 HET NAG D 1 14 HET NAG D 2 14 HET BMA D 3 11 HET MAN D 4 11 HET NAG E 1 14 HET NAG E 2 14 HET NAG A 401 14 HET NAG A 402 14 HET NAG A 413 14 HET NAG B 201 14 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 3 NAG 10(C8 H15 N O6) FORMUL 3 BMA 2(C6 H12 O6) FORMUL 3 MAN 2(C6 H12 O6) FORMUL 10 HOH *164(H2 O) HELIX 1 AA1 THR A 65 GLY A 72 1 8 HELIX 2 AA2 ASP A 73 GLN A 80 5 8 HELIX 3 AA3 ASP A 104 GLY A 116 1 13 HELIX 4 AA4 ASP A 188 ALA A 196 1 9 HELIX 5 AA5 LEU B 38 ARG B 54 1 17 HELIX 6 AA6 GLY B 75 ARG B 127 1 53 HELIX 7 AA7 ASP B 145 ASN B 154 1 10 HELIX 8 AA8 ASP B 158 PHE B 171 1 14 SHEET 1 AA1 5 GLY B 31 ASP B 37 0 SHEET 2 AA1 5 TYR B 22 ASN B 28 -1 N TYR B 22 O ASP B 37 SHEET 3 AA1 5 ALA A 11 HIS A 17 -1 N CYS A 14 O ARG B 25 SHEET 4 AA1 5 CYS B 137 ILE B 140 -1 O ILE B 140 N ALA A 11 SHEET 5 AA1 5 ALA B 130 ASP B 132 -1 N GLU B 131 O LYS B 139 SHEET 1 AA2 2 THR A 24 VAL A 26 0 SHEET 2 AA2 2 ILE A 34 VAL A 36 -1 O VAL A 36 N THR A 24 SHEET 1 AA3 2 ALA A 39 GLU A 41 0 SHEET 2 AA3 2 LYS A 315 ALA A 317 -1 O LEU A 316 N THR A 40 SHEET 1 AA4 3 VAL A 43 GLN A 44 0 SHEET 2 AA4 3 PHE A 294 GLN A 295 1 O PHE A 294 N GLN A 44 SHEET 3 AA4 3 ARG A 307 TYR A 308 1 O ARG A 307 N GLN A 295 SHEET 1 AA5 2 ILE A 51 SER A 54 0 SHEET 2 AA5 2 ILE A 274 ASN A 278 1 O GLY A 275 N ILE A 51 SHEET 1 AA6 3 ILE A 58 ASP A 60 0 SHEET 2 AA6 3 LEU A 86 GLU A 89 1 O VAL A 88 N LEU A 59 SHEET 3 AA6 3 SER A 266 ARG A 269 1 O SER A 266 N PHE A 87 SHEET 1 AA7 5 TYR A 100 ASP A 101 0 SHEET 2 AA7 5 ARG A 229 VAL A 237 1 O ILE A 232 N ASP A 101 SHEET 3 AA7 5 LYS A 176 HIS A 184 -1 N TYR A 178 O THR A 235 SHEET 4 AA7 5 GLY A 256 LYS A 259 -1 O PHE A 258 N LEU A 177 SHEET 5 AA7 5 PHE A 120 ASN A 122 -1 N ASN A 121 O TYR A 257 SHEET 1 AA8 5 TYR A 100 ASP A 101 0 SHEET 2 AA8 5 ARG A 229 VAL A 237 1 O ILE A 232 N ASP A 101 SHEET 3 AA8 5 LYS A 176 HIS A 184 -1 N TYR A 178 O THR A 235 SHEET 4 AA8 5 LEU A 251 PRO A 254 -1 O ILE A 252 N GLY A 181 SHEET 5 AA8 5 LEU A 151 TRP A 153 -1 N ASN A 152 O ALA A 253 SHEET 1 AA9 2 VAL A 130 THR A 131 0 SHEET 2 AA9 2 THR A 155 HIS A 156 -1 O THR A 155 N THR A 131 SHEET 1 AB1 2 SER A 136 ARG A 141 0 SHEET 2 AB1 2 ASN A 144 SER A 146 -1 O SER A 146 N CYS A 139 SHEET 1 AB2 4 LEU A 164 PRO A 169 0 SHEET 2 AB2 4 ILE A 242 SER A 247 -1 O LEU A 243 N MET A 168 SHEET 3 AB2 4 ILE A 202 SER A 205 -1 N THR A 203 O ASN A 246 SHEET 4 AB2 4 GLN A 210 VAL A 213 -1 O GLN A 211 N VAL A 204 SHEET 1 AB3 4 GLY A 286 ILE A 288 0 SHEET 2 AB3 4 CYS A 281 THR A 283 -1 N CYS A 281 O ILE A 288 SHEET 3 AB3 4 TYR A 302 CYS A 305 -1 O TYR A 302 N ILE A 282 SHEET 4 AB3 4 ASN B 60 LYS B 62 -1 O LYS B 62 N GLY A 303 SSBOND 1 CYS A 14 CYS B 137 1555 1555 2.12 SSBOND 2 CYS A 52 CYS A 277 1555 1555 2.14 SSBOND 3 CYS A 64 CYS A 76 1555 1555 2.08 SSBOND 4 CYS A 97 CYS A 139 1555 1555 2.08 SSBOND 5 CYS A 281 CYS A 305 1555 1555 2.08 SSBOND 6 CYS B 144 CYS B 148 1555 1555 2.17 LINK ND2 ASN A 22 C1 NAG A 401 1555 1555 1.47 LINK ND2 ASN A 38 C1 NAG D 1 1555 1555 1.45 LINK ND2 ASN A 63 C1 NAG A 402 1555 1555 1.45 LINK ND2 ASN A 133 C1 NAG A 413 1555 1555 1.44 LINK ND2 ASN A 165 C1 NAG C 1 1555 1555 1.44 LINK ND2 ASN A 285 C1 NAG E 1 1555 1555 1.45 LINK ND2 ASN B 154 C1 NAG B 201 1555 1555 1.46 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.43 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.45 LINK O3 BMA C 3 C1 MAN C 4 1555 1555 1.45 LINK O4 NAG D 1 C1 NAG D 2 1555 1555 1.45 LINK O4 NAG D 2 C1 BMA D 3 1555 1555 1.44 LINK O3 BMA D 3 C1 MAN D 4 1555 1555 1.45 LINK O4 NAG E 1 C1 NAG E 2 1555 1555 1.45 CISPEP 1 SER A 54 PRO A 55 0 4.15 CRYST1 100.491 100.491 383.319 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009951 0.005745 0.000000 0.00000 SCALE2 0.000000 0.011491 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002609 0.00000