HEADER TRANSFERASE 17-AUG-17 6AP9 TITLE CRYSTAL STRUCTURE OF HGSTP1-1 WITH S-NITROSATION OF CYS101 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTATHIONE S-TRANSFERASE P; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: GST CLASS-PI,GSTP1-1; COMPND 5 EC: 2.5.1.18; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GSTP1, FAEES3, GST3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET9A KEYWDS TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR V.KUMARI,X.JI REVDAT 2 04-OCT-23 6AP9 1 LINK REVDAT 1 22-AUG-18 6AP9 0 JRNL AUTH V.KUMARI,M.A.DYBA,X.JI JRNL TITL CYSTEINE S-NITROSYLATION OF HGSTP1-1 BY NITRIC OXIDE JRNL TITL 2 (NO)-RELEASING PRODRUGS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH X.JI,J.BLASZCZYK,B.XIAO,R.O'DONNELL,X.HU,C.HERZOG,S.V.SINGH, REMARK 1 AUTH 2 P.ZIMNIAK REMARK 1 TITL STRUCTURE AND FUNCTION OF RESIDUE 104 AND WATER MOLECULES IN REMARK 1 TITL 2 THE XENOBIOTIC SUBSTRATE-BINDING SITE IN HUMAN GLUTATHIONE REMARK 1 TITL 3 S-TRANSFERASE P1-1 REMARK 1 REF BIOCHEMISTRY V. 38 10231 1999 REMARK 1 REFN ISSN 0006-2960 REMARK 1 PMID 10441116 REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.32 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 68219 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.146 REMARK 3 R VALUE (WORKING SET) : 0.146 REMARK 3 FREE R VALUE : 0.181 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.470 REMARK 3 FREE R VALUE TEST SET COUNT : 1000 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.3228 - 2.9610 1.00 9747 145 0.1273 0.1496 REMARK 3 2 2.9610 - 2.3506 1.00 9653 144 0.1463 0.1837 REMARK 3 3 2.3506 - 2.0535 1.00 9592 143 0.1514 0.1934 REMARK 3 4 2.0535 - 1.8658 1.00 9622 143 0.1615 0.1853 REMARK 3 5 1.8658 - 1.7321 1.00 9610 142 0.1569 0.2074 REMARK 3 6 1.7321 - 1.6300 1.00 9610 144 0.1619 0.2174 REMARK 3 7 1.6300 - 1.5483 0.98 9385 139 0.1657 0.2251 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.710 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 11.46 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.019 3671 REMARK 3 ANGLE : 1.769 5008 REMARK 3 CHIRALITY : 0.104 544 REMARK 3 PLANARITY : 0.012 647 REMARK 3 DIHEDRAL : 18.015 1421 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6AP9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1000229555. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-NOV-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 68229 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.88000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.61 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.40000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 3PGT REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, MES, CA(OAC)2, PH 6.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 39.07400 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 45.02600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 39.07400 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 45.02600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17540 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -65.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 422 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 644 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 648 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 512 O HOH B 651 2.00 REMARK 500 O HOH B 407 O HOH B 580 2.08 REMARK 500 O HOH A 448 O HOH A 457 2.10 REMARK 500 O HOH B 681 O HOH B 709 2.14 REMARK 500 O HOH B 666 O HOH B 774 2.16 REMARK 500 O HOH A 558 O HOH B 680 2.17 REMARK 500 O HOH B 693 O HOH B 729 2.18 REMARK 500 O HOH A 410 O HOH A 659 2.19 REMARK 500 O HOH A 577 O HOH A 707 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 445 O HOH B 462 3545 2.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 74 NE - CZ - NH1 ANGL. DEV. = 5.0 DEGREES REMARK 500 ARG A 74 NE - CZ - NH2 ANGL. DEV. = -6.4 DEGREES REMARK 500 ASP B 98 CB - CG - OD2 ANGL. DEV. = -5.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 64 110.43 86.38 REMARK 500 TYR A 79 36.38 -142.32 REMARK 500 ASN A 110 38.71 -158.49 REMARK 500 THR A 141 -102.12 -123.22 REMARK 500 GLN B 64 111.48 84.31 REMARK 500 TYR B 79 31.46 -142.87 REMARK 500 ASN B 110 37.27 -158.32 REMARK 500 THR B 141 -100.72 -114.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 766 DISTANCE = 5.84 ANGSTROMS REMARK 525 HOH A 767 DISTANCE = 6.07 ANGSTROMS REMARK 525 HOH A 768 DISTANCE = 6.26 ANGSTROMS REMARK 525 HOH B 778 DISTANCE = 6.23 ANGSTROMS REMARK 525 HOH B 779 DISTANCE = 6.49 ANGSTROMS REMARK 525 HOH B 780 DISTANCE = 6.51 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 306 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 57 OD1 REMARK 620 2 HOH A 534 O 79.4 REMARK 620 3 HOH A 575 O 98.5 75.7 REMARK 620 4 HOH A 575 O 158.8 84.0 89.9 REMARK 620 5 HOH A 619 O 82.9 68.1 142.9 78.8 REMARK 620 6 HOH A 631 O 82.9 135.3 147.9 100.1 69.2 REMARK 620 7 HOH A 648 O 100.0 168.1 92.8 98.9 123.7 55.7 REMARK 620 8 HOH A 648 O 100.5 168.3 92.9 98.5 123.6 55.7 0.5 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 305 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 77 O REMARK 620 2 GLN A 147 OE1 145.2 REMARK 620 3 HOH A 487 O 80.6 104.7 REMARK 620 4 HOH A 494 O 70.2 141.0 95.7 REMARK 620 5 HOH A 709 O 115.7 93.4 53.7 72.4 REMARK 620 6 HOH A 709 O 141.3 73.5 90.0 73.6 37.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 306 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 171 OD1 REMARK 620 2 ASP A 171 OD2 51.9 REMARK 620 3 GLU B 30 O 12.2 46.4 REMARK 620 4 HOH B 408 O 10.7 43.7 4.5 REMARK 620 5 HOH B 563 O 13.6 43.0 3.4 3.3 REMARK 620 6 HOH B 621 O 11.1 43.7 4.0 0.6 2.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 307 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 498 O REMARK 620 2 HOH A 711 O 112.4 REMARK 620 3 HOH A 743 O 72.7 74.4 REMARK 620 4 HOH B 488 O 147.9 79.8 138.9 REMARK 620 5 HOH B 689 O 75.4 89.8 135.1 75.0 REMARK 620 6 HOH B 714 O 86.5 161.1 112.4 84.5 96.1 REMARK 620 7 HOH B 763 O 131.4 92.5 75.1 74.6 148.7 73.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 305 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY B 77 O REMARK 620 2 GLN B 147 OE1 143.4 REMARK 620 3 HOH B 525 O 70.1 73.3 REMARK 620 4 HOH B 548 O 71.7 144.7 140.9 REMARK 620 5 HOH B 568 O 142.6 73.7 146.9 72.1 REMARK 620 6 HOH B 579 O 87.5 93.4 94.0 91.9 84.5 REMARK 620 7 HOH B 652 O 90.7 90.0 88.4 84.4 95.0 176.3 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GSH A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GDS A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MES A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GSH B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GDS B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MES B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 307 DBREF 6AP9 A 0 209 UNP P09211 GSTP1_HUMAN 1 210 DBREF 6AP9 B 0 209 UNP P09211 GSTP1_HUMAN 1 210 SEQRES 1 A 210 MET PRO PRO TYR THR VAL VAL TYR PHE PRO VAL ARG GLY SEQRES 2 A 210 ARG CYS ALA ALA LEU ARG MET LEU LEU ALA ASP GLN GLY SEQRES 3 A 210 GLN SER TRP LYS GLU GLU VAL VAL THR VAL GLU THR TRP SEQRES 4 A 210 GLN GLU GLY SER LEU LYS ALA SER CYS LEU TYR GLY GLN SEQRES 5 A 210 LEU PRO LYS PHE GLN ASP GLY ASP LEU THR LEU TYR GLN SEQRES 6 A 210 SER ASN THR ILE LEU ARG HIS LEU GLY ARG THR LEU GLY SEQRES 7 A 210 LEU TYR GLY LYS ASP GLN GLN GLU ALA ALA LEU VAL ASP SEQRES 8 A 210 MET VAL ASN ASP GLY VAL GLU ASP LEU ARG SNC LYS TYR SEQRES 9 A 210 ILE SER LEU ILE TYR THR ASN TYR GLU ALA GLY LYS ASP SEQRES 10 A 210 ASP TYR VAL LYS ALA LEU PRO GLY GLN LEU LYS PRO PHE SEQRES 11 A 210 GLU THR LEU LEU SER GLN ASN GLN GLY GLY LYS THR PHE SEQRES 12 A 210 ILE VAL GLY ASP GLN ILE SER PHE ALA ASP TYR ASN LEU SEQRES 13 A 210 LEU ASP LEU LEU LEU ILE HIS GLU VAL LEU ALA PRO GLY SEQRES 14 A 210 CYS LEU ASP ALA PHE PRO LEU LEU SER ALA TYR VAL GLY SEQRES 15 A 210 ARG LEU SER ALA ARG PRO LYS LEU LYS ALA PHE LEU ALA SEQRES 16 A 210 SER PRO GLU TYR VAL ASN LEU PRO ILE ASN GLY ASN GLY SEQRES 17 A 210 LYS GLN SEQRES 1 B 210 MET PRO PRO TYR THR VAL VAL TYR PHE PRO VAL ARG GLY SEQRES 2 B 210 ARG CYS ALA ALA LEU ARG MET LEU LEU ALA ASP GLN GLY SEQRES 3 B 210 GLN SER TRP LYS GLU GLU VAL VAL THR VAL GLU THR TRP SEQRES 4 B 210 GLN GLU GLY SER LEU LYS ALA SER CYS LEU TYR GLY GLN SEQRES 5 B 210 LEU PRO LYS PHE GLN ASP GLY ASP LEU THR LEU TYR GLN SEQRES 6 B 210 SER ASN THR ILE LEU ARG HIS LEU GLY ARG THR LEU GLY SEQRES 7 B 210 LEU TYR GLY LYS ASP GLN GLN GLU ALA ALA LEU VAL ASP SEQRES 8 B 210 MET VAL ASN ASP GLY VAL GLU ASP LEU ARG SNC LYS TYR SEQRES 9 B 210 ILE SER LEU ILE TYR THR ASN TYR GLU ALA GLY LYS ASP SEQRES 10 B 210 ASP TYR VAL LYS ALA LEU PRO GLY GLN LEU LYS PRO PHE SEQRES 11 B 210 GLU THR LEU LEU SER GLN ASN GLN GLY GLY LYS THR PHE SEQRES 12 B 210 ILE VAL GLY ASP GLN ILE SER PHE ALA ASP TYR ASN LEU SEQRES 13 B 210 LEU ASP LEU LEU LEU ILE HIS GLU VAL LEU ALA PRO GLY SEQRES 14 B 210 CYS LEU ASP ALA PHE PRO LEU LEU SER ALA TYR VAL GLY SEQRES 15 B 210 ARG LEU SER ALA ARG PRO LYS LEU LYS ALA PHE LEU ALA SEQRES 16 B 210 SER PRO GLU TYR VAL ASN LEU PRO ILE ASN GLY ASN GLY SEQRES 17 B 210 LYS GLN MODRES 6AP9 SNC A 101 CYS MODIFIED RESIDUE MODRES 6AP9 SNC B 101 CYS MODIFIED RESIDUE HET SNC A 101 8 HET SNC B 101 8 HET GSH A 301 20 HET GDS A 302 40 HET MES A 303 24 HET ACT A 304 4 HET CA A 305 1 HET CA A 306 1 HET GSH B 301 20 HET GDS B 302 40 HET MES B 303 24 HET ACT B 304 4 HET CA B 305 1 HET CA B 306 1 HET CA B 307 1 HETNAM SNC S-NITROSO-CYSTEINE HETNAM GSH GLUTATHIONE HETNAM GDS OXIDIZED GLUTATHIONE DISULFIDE HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETNAM ACT ACETATE ION HETNAM CA CALCIUM ION FORMUL 1 SNC 2(C3 H6 N2 O3 S) FORMUL 3 GSH 2(C10 H17 N3 O6 S) FORMUL 4 GDS 2(C20 H32 N6 O12 S2) FORMUL 5 MES 2(C6 H13 N O4 S) FORMUL 6 ACT 2(C2 H3 O2 1-) FORMUL 7 CA 5(CA 2+) FORMUL 16 HOH *748(H2 O) HELIX 1 AA1 ARG A 11 ARG A 13 5 3 HELIX 2 AA2 CYS A 14 GLN A 24 1 11 HELIX 3 AA3 THR A 34 GLY A 41 1 8 HELIX 4 AA4 GLY A 41 CYS A 47 1 7 HELIX 5 AA5 GLN A 64 LEU A 76 1 13 HELIX 6 AA6 ASP A 82 ASN A 110 1 29 HELIX 7 AA7 ASN A 110 GLN A 135 1 26 HELIX 8 AA8 ASN A 136 LYS A 140 5 5 HELIX 9 AA9 SER A 149 ALA A 166 1 18 HELIX 10 AB1 GLY A 168 ALA A 172 5 5 HELIX 11 AB2 PHE A 173 ALA A 185 1 13 HELIX 12 AB3 ARG A 186 SER A 195 1 10 HELIX 13 AB4 SER A 195 ASN A 200 1 6 HELIX 14 AB5 ARG B 11 ARG B 13 5 3 HELIX 15 AB6 CYS B 14 GLN B 24 1 11 HELIX 16 AB7 THR B 34 GLY B 41 1 8 HELIX 17 AB8 GLY B 41 CYS B 47 1 7 HELIX 18 AB9 GLN B 64 GLY B 77 1 14 HELIX 19 AC1 ASP B 82 ASN B 110 1 29 HELIX 20 AC2 ASN B 110 GLN B 135 1 26 HELIX 21 AC3 ASN B 136 LYS B 140 5 5 HELIX 22 AC4 SER B 149 ALA B 166 1 18 HELIX 23 AC5 PHE B 173 ALA B 185 1 13 HELIX 24 AC6 ARG B 186 SER B 195 1 10 HELIX 25 AC7 SER B 195 ASN B 200 1 6 SHEET 1 AA1 4 TRP A 28 VAL A 32 0 SHEET 2 AA1 4 TYR A 3 TYR A 7 1 N VAL A 5 O GLU A 31 SHEET 3 AA1 4 LYS A 54 ASP A 57 -1 O LYS A 54 N VAL A 6 SHEET 4 AA1 4 LEU A 60 TYR A 63 -1 O LEU A 62 N PHE A 55 SHEET 1 AA2 4 TRP B 28 VAL B 32 0 SHEET 2 AA2 4 TYR B 3 TYR B 7 1 N VAL B 5 O GLU B 31 SHEET 3 AA2 4 LYS B 54 ASP B 57 -1 O LYS B 54 N VAL B 6 SHEET 4 AA2 4 LEU B 60 TYR B 63 -1 O LEU B 62 N PHE B 55 LINK C ARG A 100 N ASNC A 101 1555 1555 1.34 LINK C ASNC A 101 N LYS A 102 1555 1555 1.33 LINK C ARG B 100 N ASNC B 101 1555 1555 1.34 LINK C ASNC B 101 N LYS B 102 1555 1555 1.34 LINK OD1 ASP A 57 CA CA A 306 1555 1555 2.33 LINK O GLY A 77 CA CA A 305 1555 1555 2.45 LINK OE1AGLN A 147 CA CA A 305 1555 1555 2.65 LINK OD1 ASP A 171 CA CA B 306 1555 4546 2.47 LINK OD2 ASP A 171 CA CA B 306 1555 4546 2.63 LINK CA CA A 305 O HOH A 487 1555 1555 2.08 LINK CA CA A 305 O HOH A 494 1555 1555 2.32 LINK CA CA A 305 O AHOH A 709 1555 1555 3.13 LINK CA CA A 305 O BHOH A 709 1555 1555 2.65 LINK CA CA A 306 O HOH A 534 1555 1555 2.79 LINK CA CA A 306 O HOH A 575 1555 1555 2.42 LINK CA CA A 306 O HOH A 575 1555 2555 2.22 LINK CA CA A 306 O HOH A 619 1555 1555 2.26 LINK CA CA A 306 O HOH A 631 1555 1555 2.38 LINK CA CA A 306 O HOH A 648 1555 1555 2.20 LINK CA CA A 306 O HOH A 648 1555 2555 2.21 LINK O HOH A 498 CA CA B 307 4555 1555 2.49 LINK O HOH A 711 CA CA B 307 4555 1555 2.42 LINK O HOH A 743 CA CA B 307 4555 1555 2.30 LINK O GLU B 30 CA CA B 306 1555 1555 2.39 LINK O GLY B 77 CA CA B 305 1555 1555 2.34 LINK OE1 GLN B 147 CA CA B 305 1555 1555 2.35 LINK CA CA B 305 O HOH B 525 1555 1555 2.49 LINK CA CA B 305 O HOH B 548 1555 1555 2.46 LINK CA CA B 305 O HOH B 568 1555 1555 2.41 LINK CA CA B 305 O HOH B 579 1555 1555 2.38 LINK CA CA B 305 O HOH B 652 1555 1555 2.33 LINK CA CA B 306 O HOH B 408 1555 1555 2.56 LINK CA CA B 306 O HOH B 563 1555 1555 2.21 LINK CA CA B 306 O HOH B 621 1555 1555 2.35 LINK CA CA B 307 O HOH B 488 1555 1555 2.37 LINK CA CA B 307 O HOH B 689 1555 1555 2.38 LINK CA CA B 307 O HOH B 714 1555 1555 2.59 LINK CA CA B 307 O HOH B 763 1555 1555 2.36 CISPEP 1 LEU A 52 PRO A 53 0 7.87 CISPEP 2 LEU B 52 PRO B 53 0 5.94 SITE 1 AC1 16 TYR A 7 PHE A 8 ARG A 13 TRP A 38 SITE 2 AC1 16 LYS A 44 GLN A 51 LEU A 52 PRO A 53 SITE 3 AC1 16 GLN A 64 SER A 65 GDS A 302 HOH A 456 SITE 4 AC1 16 HOH A 545 HOH A 574 HOH A 645 ASP B 98 SITE 1 AC2 22 PHE A 8 ARG A 13 TRP A 38 LYS A 44 SITE 2 AC2 22 GLN A 51 LEU A 52 PRO A 53 GLN A 64 SITE 3 AC2 22 SER A 65 ILE A 104 SER A 105 TYR A 108 SITE 4 AC2 22 THR A 109 GSH A 301 HOH A 408 HOH A 456 SITE 5 AC2 22 HOH A 545 HOH A 561 HOH A 574 HOH A 622 SITE 6 AC2 22 HOH A 645 ASP B 98 SITE 1 AC3 14 ALA A 22 TRP A 28 GLU A 30 PHE A 192 SITE 2 AC3 14 GLU A 197 HOH A 409 HOH A 416 HOH A 421 SITE 3 AC3 14 HOH A 435 HOH A 471 HOH A 563 HOH A 613 SITE 4 AC3 14 ASP B 171 HOH B 679 SITE 1 AC4 10 ILE A 148 ARG A 186 HOH A 427 HOH A 465 SITE 2 AC4 10 HOH A 550 HOH A 572 HOH A 580 HOH A 626 SITE 3 AC4 10 HOH A 652 HOH A 709 SITE 1 AC5 5 GLY A 77 GLN A 147 HOH A 487 HOH A 494 SITE 2 AC5 5 HOH A 709 SITE 1 AC6 6 ASP A 57 HOH A 534 HOH A 575 HOH A 619 SITE 2 AC6 6 HOH A 631 HOH A 648 SITE 1 AC7 15 ASP A 98 TYR B 7 ARG B 13 TRP B 38 SITE 2 AC7 15 LYS B 44 GLN B 51 LEU B 52 GLN B 64 SITE 3 AC7 15 SER B 65 GDS B 302 HOH B 407 HOH B 484 SITE 4 AC7 15 HOH B 539 HOH B 576 HOH B 580 SITE 1 AC8 22 ASP A 98 PHE B 8 ARG B 13 TRP B 38 SITE 2 AC8 22 LYS B 44 GLN B 51 LEU B 52 PRO B 53 SITE 3 AC8 22 GLN B 64 SER B 65 ILE B 104 SER B 105 SITE 4 AC8 22 TYR B 108 THR B 109 GSH B 301 HOH B 407 SITE 5 AC8 22 HOH B 484 HOH B 505 HOH B 539 HOH B 558 SITE 6 AC8 22 HOH B 576 HOH B 580 SITE 1 AC9 9 ASP A 171 HOH A 403 ALA B 22 TRP B 28 SITE 2 AC9 9 GLU B 30 GLU B 197 HOH B 404 HOH B 411 SITE 3 AC9 9 HOH B 482 SITE 1 AD1 8 GLN B 147 ILE B 148 ARG B 186 HOH B 511 SITE 2 AD1 8 HOH B 600 HOH B 623 HOH B 627 HOH B 685 SITE 1 AD2 7 GLY B 77 GLN B 147 HOH B 525 HOH B 548 SITE 2 AD2 7 HOH B 568 HOH B 579 HOH B 652 SITE 1 AD3 6 ASP A 171 LYS B 29 GLU B 30 HOH B 408 SITE 2 AD3 6 HOH B 563 HOH B 621 SITE 1 AD4 7 HOH A 498 HOH A 711 HOH A 743 HOH B 488 SITE 2 AD4 7 HOH B 689 HOH B 714 HOH B 763 CRYST1 78.148 90.052 68.872 90.00 98.67 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012796 0.000000 0.001950 0.00000 SCALE2 0.000000 0.011105 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014687 0.00000