HEADER CHAPERONE/INHIBITOR 25-AUG-17 6ASQ TITLE STRUCTURE OF GRP94 BOUND TO METHYL 2-[2-(2-BENZYLPYRIDIN-3-YL)ETHYL]- TITLE 2 3-CHLORO-4,6-DIHYDROXYBENZOATE, A PAN-HSP90 INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDOPLASMIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 69-286, GGGG LINKER, 328-337; COMPND 5 SYNONYM: 94 KDA GLUCOSE-REGULATED PROTEIN, GRP-94, HEAT SHOCK PROTEIN COMPND 6 90 KDA BETA MEMBER 1; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANIS LUPUS FAMILIARIS; SOURCE 3 ORGANISM_COMMON: DOG; SOURCE 4 ORGANISM_TAXID: 9615; SOURCE 5 GENE: HSP90B1, GRP94, TRA1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GRP94, HSP90, INHIBITOR, CHAPERONE-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.J.E.HUARD,R.L.LIEBERMAN REVDAT 4 04-OCT-23 6ASQ 1 REMARK REVDAT 3 17-APR-19 6ASQ 1 REMARK REVDAT 2 02-MAY-18 6ASQ 1 JRNL REVDAT 1 18-APR-18 6ASQ 0 JRNL AUTH D.J.E.HUARD,V.M.CROWLEY,Y.DU,R.A.CORDOVA,Z.SUN,M.O.TOMLIN, JRNL AUTH 2 C.A.DICKEY,J.KOREN,L.BLAIR,H.FU,B.S.J.BLAGG,R.L.LIEBERMAN JRNL TITL TRIFUNCTIONAL HIGH-THROUGHPUT SCREEN IDENTIFIES PROMISING JRNL TITL 2 SCAFFOLD TO INHIBIT GRP94 AND TREAT MYOCILIN-ASSOCIATED JRNL TITL 3 GLAUCOMA. JRNL REF ACS CHEM. BIOL. V. 13 933 2018 JRNL REFN ESSN 1554-8937 JRNL PMID 29402077 JRNL DOI 10.1021/ACSCHEMBIO.7B01083 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.36 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 22739 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.197 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.780 REMARK 3 FREE R VALUE TEST SET COUNT : 1997 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.3654 - 5.6602 0.99 1599 155 0.2071 0.2462 REMARK 3 2 5.6602 - 4.4943 1.00 1515 146 0.1808 0.2067 REMARK 3 3 4.4943 - 3.9266 1.00 1511 144 0.1595 0.2228 REMARK 3 4 3.9266 - 3.5678 1.00 1483 143 0.1766 0.2042 REMARK 3 5 3.5678 - 3.3122 1.00 1478 142 0.1944 0.2181 REMARK 3 6 3.3122 - 3.1170 1.00 1469 142 0.2049 0.2295 REMARK 3 7 3.1170 - 2.9609 1.00 1486 143 0.2192 0.2417 REMARK 3 8 2.9609 - 2.8321 1.00 1457 140 0.2127 0.2521 REMARK 3 9 2.8321 - 2.7231 1.00 1468 141 0.2293 0.3036 REMARK 3 10 2.7231 - 2.6291 1.00 1469 142 0.2224 0.2572 REMARK 3 11 2.6291 - 2.5469 1.00 1464 140 0.2106 0.2399 REMARK 3 12 2.5469 - 2.4741 1.00 1451 140 0.2111 0.2759 REMARK 3 13 2.4741 - 2.4090 1.00 1457 141 0.2210 0.2950 REMARK 3 14 2.4090 - 2.3502 0.98 1435 138 0.2202 0.2932 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.940 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 3692 REMARK 3 ANGLE : 0.800 4914 REMARK 3 CHIRALITY : 0.044 554 REMARK 3 PLANARITY : 0.003 595 REMARK 3 DIHEDRAL : 17.278 2185 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 74 THROUGH 164 ) REMARK 3 ORIGIN FOR THE GROUP (A): -56.8504 120.7859 -55.0347 REMARK 3 T TENSOR REMARK 3 T11: 0.1894 T22: 0.1917 REMARK 3 T33: 0.2071 T12: -0.0037 REMARK 3 T13: 0.0314 T23: -0.0517 REMARK 3 L TENSOR REMARK 3 L11: 2.0753 L22: 1.2720 REMARK 3 L33: 1.6938 L12: 0.1217 REMARK 3 L13: 0.7621 L23: -0.1895 REMARK 3 S TENSOR REMARK 3 S11: 0.0728 S12: 0.0259 S13: 0.0352 REMARK 3 S21: -0.0930 S22: -0.0858 S23: 0.0578 REMARK 3 S31: 0.1266 S32: 0.0485 S33: -0.0100 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 165 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): -48.3189 119.5560 -72.3821 REMARK 3 T TENSOR REMARK 3 T11: 0.6758 T22: 1.4056 REMARK 3 T33: 0.8589 T12: 0.1798 REMARK 3 T13: 0.0749 T23: -0.1419 REMARK 3 L TENSOR REMARK 3 L11: 0.2563 L22: 0.3591 REMARK 3 L33: 0.1384 L12: 0.2690 REMARK 3 L13: 0.1153 L23: 0.0313 REMARK 3 S TENSOR REMARK 3 S11: 0.4565 S12: 0.8095 S13: 0.2766 REMARK 3 S21: -0.9822 S22: -0.5517 S23: -0.3291 REMARK 3 S31: 0.4932 S32: 0.2763 S33: 0.2483 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 180 THROUGH 337 ) REMARK 3 ORIGIN FOR THE GROUP (A): -60.5406 116.1209 -51.2809 REMARK 3 T TENSOR REMARK 3 T11: 0.2114 T22: 0.1939 REMARK 3 T33: 0.2363 T12: -0.0265 REMARK 3 T13: 0.0131 T23: -0.0473 REMARK 3 L TENSOR REMARK 3 L11: 2.1769 L22: 2.3537 REMARK 3 L33: 1.4520 L12: -0.4915 REMARK 3 L13: 0.6377 L23: 0.0789 REMARK 3 S TENSOR REMARK 3 S11: 0.0673 S12: -0.0974 S13: -0.1777 REMARK 3 S21: 0.0108 S22: -0.0563 S23: 0.0404 REMARK 3 S31: 0.1912 S32: -0.0159 S33: -0.0226 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 74 THROUGH 96 ) REMARK 3 ORIGIN FOR THE GROUP (A): -59.7802 159.5762 -66.0886 REMARK 3 T TENSOR REMARK 3 T11: 0.3797 T22: 0.3302 REMARK 3 T33: 0.1994 T12: 0.0127 REMARK 3 T13: 0.0275 T23: 0.0151 REMARK 3 L TENSOR REMARK 3 L11: 1.9592 L22: 3.5932 REMARK 3 L33: 2.0254 L12: -0.7382 REMARK 3 L13: 0.5217 L23: -0.8582 REMARK 3 S TENSOR REMARK 3 S11: -0.0792 S12: 0.2062 S13: -0.0099 REMARK 3 S21: -0.1873 S22: 0.0691 S23: -0.4799 REMARK 3 S31: 0.3890 S32: 0.2064 S33: -0.0109 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 97 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): -55.2425 161.5938 -44.4542 REMARK 3 T TENSOR REMARK 3 T11: 0.1751 T22: 0.2180 REMARK 3 T33: 0.1572 T12: 0.0275 REMARK 3 T13: -0.0050 T23: -0.0361 REMARK 3 L TENSOR REMARK 3 L11: 3.2891 L22: 2.2665 REMARK 3 L33: 1.2246 L12: 1.4487 REMARK 3 L13: 0.4478 L23: -0.1128 REMARK 3 S TENSOR REMARK 3 S11: 0.0672 S12: -0.2360 S13: 0.1567 REMARK 3 S21: 0.1646 S22: -0.0154 S23: 0.0255 REMARK 3 S31: 0.0238 S32: -0.0126 S33: -0.0312 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 150 THROUGH 197 ) REMARK 3 ORIGIN FOR THE GROUP (A): -51.2796 163.6800 -61.6908 REMARK 3 T TENSOR REMARK 3 T11: 0.3070 T22: 0.6017 REMARK 3 T33: 0.4227 T12: -0.0274 REMARK 3 T13: 0.0579 T23: -0.0370 REMARK 3 L TENSOR REMARK 3 L11: 0.8805 L22: 3.4184 REMARK 3 L33: 1.4666 L12: -0.1433 REMARK 3 L13: 0.6406 L23: 0.2581 REMARK 3 S TENSOR REMARK 3 S11: -0.0206 S12: 0.6577 S13: 0.0665 REMARK 3 S21: -0.6466 S22: 0.0140 S23: -0.7482 REMARK 3 S31: -0.1553 S32: 0.7851 S33: 0.1480 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 198 THROUGH 337 ) REMARK 3 ORIGIN FOR THE GROUP (A): -61.7031 158.0676 -46.9328 REMARK 3 T TENSOR REMARK 3 T11: 0.1704 T22: 0.1882 REMARK 3 T33: 0.1709 T12: -0.0252 REMARK 3 T13: -0.0049 T23: -0.0452 REMARK 3 L TENSOR REMARK 3 L11: 2.4819 L22: 1.8246 REMARK 3 L33: 1.9291 L12: -0.3466 REMARK 3 L13: 0.5035 L23: 0.1911 REMARK 3 S TENSOR REMARK 3 S11: 0.0347 S12: -0.1266 S13: -0.0409 REMARK 3 S21: -0.0195 S22: -0.0654 S23: -0.0047 REMARK 3 S31: 0.1529 S32: -0.0447 S33: 0.0242 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6ASQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-AUG-17. REMARK 100 THE DEPOSITION ID IS D_1000229768. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-OCT-16 REMARK 200 TEMPERATURE (KELVIN) : 197.5 REMARK 200 PH : 7.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00000 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(220) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22770 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 42.360 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 14.30 REMARK 200 R MERGE (I) : 0.09377 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 24.7500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.43 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.47730 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2GFD REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1:1 30 MG/ML PROTEIN IN 100 MM BICINE, REMARK 280 PH 7.8 AGAINST MOTHER LIQUOR (37% PEG400, 5% GLYCEROL, 100 MM REMARK 280 BICINE, PH 7.8, 75 MM MAGNESIUM CHLORIDE). CRYSTALS WERE REMARK 280 HARVESTED, AND SOAKED FOR 48 HOURS IN MOTHER LIQUOR CONTAINING REMARK 280 2.5 MM INHIBITOR. AFTER SOAKING, GLYCEROL WAS ADDED TO ~25% REMARK 280 FINAL CONCENTRATION., VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 289.2K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 32.71550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 47.87950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.35850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 47.87950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 32.71550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.35850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 68 REMARK 465 LEU A 69 REMARK 465 ARG A 70 REMARK 465 GLU A 71 REMARK 465 LYS A 72 REMARK 465 SER A 73 REMARK 465 SER A 169 REMARK 465 ALA A 181 REMARK 465 GLN A 182 REMARK 465 GLU A 183 REMARK 465 ASP A 184 REMARK 465 GLY A 185 REMARK 465 GLN A 186 REMARK 465 GLY A 324 REMARK 465 GLY A 325 REMARK 465 GLY A 326 REMARK 465 SER B 68 REMARK 465 LEU B 69 REMARK 465 ARG B 70 REMARK 465 GLU B 71 REMARK 465 LYS B 72 REMARK 465 SER B 73 REMARK 465 GLN B 182 REMARK 465 GLU B 183 REMARK 465 ASP B 184 REMARK 465 GLY B 185 REMARK 465 GLN B 186 REMARK 465 GLY B 324 REMARK 465 GLY B 325 REMARK 465 GLY B 326 REMARK 465 GLY B 327 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 130 CG CD OE1 OE2 REMARK 470 GLU A 157 CG CD OE1 OE2 REMARK 470 GLU A 180 CG CD OE1 OE2 REMARK 470 GLU A 253 CG CD OE1 OE2 REMARK 470 GLU B 180 CG CD OE1 OE2 REMARK 470 LYS B 328 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O SER B 92 NZ LYS B 95 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS A 161 CB - CG - CD ANGL. DEV. = 16.8 DEGREES REMARK 500 LYS A 161 CD - CE - NZ ANGL. DEV. = 14.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 96 64.81 -115.61 REMARK 500 LEU A 126 42.11 -106.18 REMARK 500 ASN A 129 117.98 -172.50 REMARK 500 SER A 227 -13.87 84.90 REMARK 500 GLU A 229 172.60 175.36 REMARK 500 ASN B 96 65.92 -114.43 REMARK 500 LEU B 126 40.80 -107.46 REMARK 500 ASN B 129 116.31 -174.07 REMARK 500 SER B 169 -146.08 35.47 REMARK 500 GLU B 180 40.34 -77.66 REMARK 500 SER B 227 -13.70 85.62 REMARK 500 GLU B 229 172.44 175.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 PE8 A 402 REMARK 610 PE8 A 403 REMARK 610 PE8 A 404 REMARK 610 PE8 A 405 REMARK 610 PE8 A 406 REMARK 610 PE8 A 409 REMARK 610 PE8 B 401 REMARK 610 PE8 B 402 REMARK 610 PE8 B 403 REMARK 610 PE8 B 404 REMARK 610 PE8 B 405 REMARK 610 PE8 B 406 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PE8 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PE8 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PE8 A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PE8 A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PE8 A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PE8 A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PE8 A 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 410 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 411 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue VC4 A 412 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PE8 B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PE8 B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PE8 B 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PE8 B 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PE8 B 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 409 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue VC4 B 410 DBREF 6ASQ A 69 286 UNP P41148 ENPL_CANLF 69 286 DBREF 6ASQ A 328 337 UNP P41148 ENPL_CANLF 328 337 DBREF 6ASQ B 69 286 UNP P41148 ENPL_CANLF 69 286 DBREF 6ASQ B 328 337 UNP P41148 ENPL_CANLF 328 337 SEQADV 6ASQ SER A 68 UNP P41148 EXPRESSION TAG SEQADV 6ASQ GLY A 324 UNP P41148 LINKER SEQADV 6ASQ GLY A 325 UNP P41148 LINKER SEQADV 6ASQ GLY A 326 UNP P41148 LINKER SEQADV 6ASQ GLY A 327 UNP P41148 LINKER SEQADV 6ASQ SER B 68 UNP P41148 EXPRESSION TAG SEQADV 6ASQ GLY B 324 UNP P41148 LINKER SEQADV 6ASQ GLY B 325 UNP P41148 LINKER SEQADV 6ASQ GLY B 326 UNP P41148 LINKER SEQADV 6ASQ GLY B 327 UNP P41148 LINKER SEQRES 1 A 233 SER LEU ARG GLU LYS SER GLU LYS PHE ALA PHE GLN ALA SEQRES 2 A 233 GLU VAL ASN ARG MET MET LYS LEU ILE ILE ASN SER LEU SEQRES 3 A 233 TYR LYS ASN LYS GLU ILE PHE LEU ARG GLU LEU ILE SER SEQRES 4 A 233 ASN ALA SER ASP ALA LEU ASP LYS ILE ARG LEU ILE SER SEQRES 5 A 233 LEU THR ASP GLU ASN ALA LEU ALA GLY ASN GLU GLU LEU SEQRES 6 A 233 THR VAL LYS ILE LYS CYS ASP LYS GLU LYS ASN LEU LEU SEQRES 7 A 233 HIS VAL THR ASP THR GLY VAL GLY MET THR ARG GLU GLU SEQRES 8 A 233 LEU VAL LYS ASN LEU GLY THR ILE ALA LYS SER GLY THR SEQRES 9 A 233 SER GLU PHE LEU ASN LYS MET THR GLU ALA GLN GLU ASP SEQRES 10 A 233 GLY GLN SER THR SER GLU LEU ILE GLY GLN PHE GLY VAL SEQRES 11 A 233 GLY PHE TYR SER ALA PHE LEU VAL ALA ASP LYS VAL ILE SEQRES 12 A 233 VAL THR SER LYS HIS ASN ASN ASP THR GLN HIS ILE TRP SEQRES 13 A 233 GLU SER ASP SER ASN GLU PHE SER VAL ILE ALA ASP PRO SEQRES 14 A 233 ARG GLY ASN THR LEU GLY ARG GLY THR THR ILE THR LEU SEQRES 15 A 233 VAL LEU LYS GLU GLU ALA SER ASP TYR LEU GLU LEU ASP SEQRES 16 A 233 THR ILE LYS ASN LEU VAL LYS LYS TYR SER GLN PHE ILE SEQRES 17 A 233 ASN PHE PRO ILE TYR VAL TRP SER SER LYS THR GLY GLY SEQRES 18 A 233 GLY GLY LYS THR VAL TRP ASP TRP GLU LEU MET ASN SEQRES 1 B 233 SER LEU ARG GLU LYS SER GLU LYS PHE ALA PHE GLN ALA SEQRES 2 B 233 GLU VAL ASN ARG MET MET LYS LEU ILE ILE ASN SER LEU SEQRES 3 B 233 TYR LYS ASN LYS GLU ILE PHE LEU ARG GLU LEU ILE SER SEQRES 4 B 233 ASN ALA SER ASP ALA LEU ASP LYS ILE ARG LEU ILE SER SEQRES 5 B 233 LEU THR ASP GLU ASN ALA LEU ALA GLY ASN GLU GLU LEU SEQRES 6 B 233 THR VAL LYS ILE LYS CYS ASP LYS GLU LYS ASN LEU LEU SEQRES 7 B 233 HIS VAL THR ASP THR GLY VAL GLY MET THR ARG GLU GLU SEQRES 8 B 233 LEU VAL LYS ASN LEU GLY THR ILE ALA LYS SER GLY THR SEQRES 9 B 233 SER GLU PHE LEU ASN LYS MET THR GLU ALA GLN GLU ASP SEQRES 10 B 233 GLY GLN SER THR SER GLU LEU ILE GLY GLN PHE GLY VAL SEQRES 11 B 233 GLY PHE TYR SER ALA PHE LEU VAL ALA ASP LYS VAL ILE SEQRES 12 B 233 VAL THR SER LYS HIS ASN ASN ASP THR GLN HIS ILE TRP SEQRES 13 B 233 GLU SER ASP SER ASN GLU PHE SER VAL ILE ALA ASP PRO SEQRES 14 B 233 ARG GLY ASN THR LEU GLY ARG GLY THR THR ILE THR LEU SEQRES 15 B 233 VAL LEU LYS GLU GLU ALA SER ASP TYR LEU GLU LEU ASP SEQRES 16 B 233 THR ILE LYS ASN LEU VAL LYS LYS TYR SER GLN PHE ILE SEQRES 17 B 233 ASN PHE PRO ILE TYR VAL TRP SER SER LYS THR GLY GLY SEQRES 18 B 233 GLY GLY LYS THR VAL TRP ASP TRP GLU LEU MET ASN HET PE8 A 401 25 HET PE8 A 402 13 HET PE8 A 403 16 HET PE8 A 404 13 HET PE8 A 405 4 HET PE8 A 406 4 HET PEG A 407 7 HET PEG A 408 7 HET PE8 A 409 4 HET GOL A 410 6 HET GOL A 411 6 HET VC4 A 412 28 HET PE8 B 401 16 HET PE8 B 402 4 HET PE8 B 403 4 HET PE8 B 404 6 HET PE8 B 405 4 HET PE8 B 406 4 HET PEG B 407 7 HET GOL B 408 6 HET GOL B 409 6 HET VC4 B 410 28 HETNAM PE8 3,6,9,12,15,18,21-HEPTAOXATRICOSANE-1,23-DIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM GOL GLYCEROL HETNAM VC4 METHYL 2-[2-(2-BENZYLPYRIDIN-3-YL)ETHYL]-3-CHLORO-4,6- HETNAM 2 VC4 DIHYDROXYBENZOATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 PE8 13(C16 H34 O9) FORMUL 9 PEG 3(C4 H10 O3) FORMUL 12 GOL 4(C3 H8 O3) FORMUL 14 VC4 2(C22 H20 CL N O4) FORMUL 25 HOH *78(H2 O) HELIX 1 AA1 GLN A 79 LEU A 93 1 15 HELIX 2 AA2 GLU A 98 ASP A 122 1 25 HELIX 3 AA3 THR A 155 THR A 165 1 11 HELIX 4 AA4 THR A 171 GLU A 180 1 10 HELIX 5 AA5 THR A 188 PHE A 195 1 8 HELIX 6 AA6 VAL A 197 LEU A 204 5 8 HELIX 7 AA7 GLU A 253 LEU A 259 5 7 HELIX 8 AA8 GLU A 260 SER A 272 1 13 HELIX 9 AA9 GLN B 79 LEU B 93 1 15 HELIX 10 AB1 GLU B 98 ASP B 122 1 25 HELIX 11 AB2 THR B 155 THR B 165 1 11 HELIX 12 AB3 GLY B 170 GLU B 180 1 11 HELIX 13 AB4 THR B 188 PHE B 195 1 8 HELIX 14 AB5 VAL B 197 LEU B 204 5 8 HELIX 15 AB6 GLU B 253 LEU B 259 5 7 HELIX 16 AB7 GLU B 260 SER B 272 1 13 SHEET 1 AA1 9 LYS A 75 PHE A 76 0 SHEET 2 AA1 9 PHE A 230 ALA A 234 -1 O PHE A 230 N PHE A 76 SHEET 3 AA1 9 HIS A 221 SER A 225 -1 N ILE A 222 O ILE A 233 SHEET 4 AA1 9 ALA A 206 LYS A 214 -1 N VAL A 211 O TRP A 223 SHEET 5 AA1 9 GLY A 244 LEU A 251 -1 O THR A 246 N THR A 212 SHEET 6 AA1 9 LEU A 144 ASP A 149 -1 N VAL A 147 O ILE A 247 SHEET 7 AA1 9 VAL A 134 ASP A 139 -1 N LYS A 135 O THR A 148 SHEET 8 AA1 9 ILE A 279 LYS A 285 1 O TYR A 280 N VAL A 134 SHEET 9 AA1 9 VAL A 330 LEU A 335 -1 O ASP A 332 N SER A 283 SHEET 1 AA2 9 LYS B 75 PHE B 76 0 SHEET 2 AA2 9 PHE B 230 ALA B 234 -1 O PHE B 230 N PHE B 76 SHEET 3 AA2 9 HIS B 221 SER B 225 -1 N ILE B 222 O ILE B 233 SHEET 4 AA2 9 ALA B 206 LYS B 214 -1 N VAL B 211 O TRP B 223 SHEET 5 AA2 9 GLY B 244 LEU B 251 -1 O THR B 246 N THR B 212 SHEET 6 AA2 9 LEU B 144 ASP B 149 -1 N VAL B 147 O ILE B 247 SHEET 7 AA2 9 VAL B 134 ASP B 139 -1 N LYS B 135 O THR B 148 SHEET 8 AA2 9 ILE B 279 LYS B 285 1 O TYR B 280 N VAL B 134 SHEET 9 AA2 9 VAL B 330 LEU B 335 -1 O VAL B 330 N LYS B 285 CISPEP 1 ALA A 167 LYS A 168 0 0.64 SITE 1 AC1 9 ASN A 83 LYS A 87 ILE A 90 SER A 227 SITE 2 AC1 9 ASN A 228 ASN B 83 LYS B 87 SER B 227 SITE 3 AC1 9 ASN B 228 SITE 1 AC2 2 LEU A 117 THR A 121 SITE 1 AC3 3 LYS A 137 TRP A 333 PE8 A 404 SITE 1 AC4 5 THR A 212 ARG A 237 THR A 240 THR A 248 SITE 2 AC4 5 PE8 A 403 SITE 1 AC5 7 ASN A 129 LYS A 135 THR A 148 THR A 150 SITE 2 AC5 7 LEU A 241 HOH A 502 HOH A 512 SITE 1 AC6 2 GLU A 131 TRP A 333 SITE 1 AC7 6 LYS A 214 ASN A 217 ASP A 218 ASP B 262 SITE 2 AC7 6 ASN B 266 PE8 B 406 SITE 1 AC8 1 ASN A 239 SITE 1 AC9 1 ASN A 276 SITE 1 AD1 3 ASP A 110 ASP A 113 LYS A 114 SITE 1 AD2 6 ASP A 257 ASP A 262 THR A 263 ASP B 218 SITE 2 AD2 6 THR B 219 HIS B 221 SITE 1 AD3 15 LEU A 104 ASN A 107 ASP A 110 ALA A 111 SITE 2 AD3 15 LYS A 114 ASP A 149 VAL A 152 GLY A 153 SITE 3 AD3 15 MET A 154 ASN A 162 PHE A 199 THR A 245 SITE 4 AD3 15 ILE A 247 HOH A 501 HOH A 513 SITE 1 AD4 5 LYS B 137 HIS B 146 THR B 148 THR B 246 SITE 2 AD4 5 PEG B 407 SITE 1 AD5 3 LEU B 335 ASN B 337 PE8 B 405 SITE 1 AD6 8 GLU B 131 LYS B 135 THR B 148 ASP B 149 SITE 2 AD6 8 THR B 150 LEU B 241 ARG B 243 GLY B 244 SITE 1 AD7 3 ASN B 276 ASN B 337 PE8 B 402 SITE 1 AD8 4 ASP A 218 PEG A 407 GLU B 98 ASP B 257 SITE 1 AD9 3 TRP B 282 TRP B 331 PE8 B 401 SITE 1 AE1 2 ASP B 110 LYS B 114 SITE 1 AE2 3 LYS B 135 TYR B 280 TRP B 333 SITE 1 AE3 15 LEU B 104 ASN B 107 ASP B 110 ALA B 111 SITE 2 AE3 15 LYS B 114 ASP B 149 VAL B 152 GLY B 153 SITE 3 AE3 15 MET B 154 ASN B 162 PHE B 199 THR B 245 SITE 4 AE3 15 ILE B 247 HOH B 501 HOH B 510 CRYST1 65.431 84.717 95.759 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015283 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011804 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010443 0.00000