HEADER HYDROLASE 08-SEP-17 6AYV TITLE CRYSTAL STRUCTURE OF FRUCTOSE-1,6-BISPHOSPHATASE T84A FROM TITLE 2 MYCOBACTERIUM TUBERCULOSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: FRUCTOSE-1,6-BISPHOSPHATASE CLASS 2; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 35-362; COMPND 5 SYNONYM: FBPASE CLASS 2,D-FRUCTOSE-1,6-BISPHOSPHATE 1- COMPND 6 PHOSPHOHYDROLASE CLASS 2; COMPND 7 EC: 3.1.3.11; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 83331; SOURCE 4 STRAIN: CDC 1551 / OSHKOSH; SOURCE 5 ATCC: RV1099C; SOURCE 6 GENE: GLPX, MT1131; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_CELL: BL21 (DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS FRUCTOSE-1, 6-BISPHOSPHATASE, GLUCONEOGENESIS, CLASS II PHOSPHATASE, KEYWDS 2 MYCOBACTERIUM TUBERCULOSIS, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR C.ABAD-ZAPATERO,N.WOLF,H.J.GUTKA,F.MOVAHEDZADEH REVDAT 4 04-OCT-23 6AYV 1 HETSYN REVDAT 3 29-JUL-20 6AYV 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE REVDAT 2 25-APR-18 6AYV 1 JRNL REVDAT 1 14-MAR-18 6AYV 0 JRNL AUTH N.M.WOLF,H.J.GUTKA,F.MOVAHEDZADEH,C.ABAD-ZAPATERO JRNL TITL STRUCTURES OF THE MYCOBACTERIUM TUBERCULOSIS GLPX PROTEIN JRNL TITL 2 (CLASS II FRUCTOSE-1,6-BISPHOSPHATASE): IMPLICATIONS FOR THE JRNL TITL 3 ACTIVE OLIGOMERIC STATE, CATALYTIC MECHANISM AND CITRATE JRNL TITL 4 INHIBITION. JRNL REF ACTA CRYSTALLOGR D STRUCT V. 74 321 2018 JRNL REF 2 BIOL JRNL REFN ISSN 2059-7983 JRNL PMID 29652259 JRNL DOI 10.1107/S2059798318002838 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.12_2829: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.77 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 33102 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 1674 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 38.7732 - 5.2617 1.00 2835 152 0.1913 0.2150 REMARK 3 2 5.2617 - 4.1780 1.00 2676 157 0.1557 0.2209 REMARK 3 3 4.1780 - 3.6503 1.00 2649 126 0.1668 0.2347 REMARK 3 4 3.6503 - 3.3167 1.00 2614 159 0.1930 0.2747 REMARK 3 5 3.3167 - 3.0791 1.00 2600 138 0.2045 0.2555 REMARK 3 6 3.0791 - 2.8976 1.00 2604 136 0.2104 0.2822 REMARK 3 7 2.8976 - 2.7526 1.00 2587 134 0.2119 0.2683 REMARK 3 8 2.7526 - 2.6328 1.00 2580 138 0.2147 0.2387 REMARK 3 9 2.6328 - 2.5314 1.00 2568 134 0.2337 0.3212 REMARK 3 10 2.5314 - 2.4441 1.00 2554 152 0.2252 0.3248 REMARK 3 11 2.4441 - 2.3677 1.00 2574 139 0.2336 0.2993 REMARK 3 12 2.3677 - 2.3000 1.00 2587 109 0.2327 0.2958 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.450 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 4831 REMARK 3 ANGLE : 1.001 6527 REMARK 3 CHIRALITY : 0.059 743 REMARK 3 PLANARITY : 0.005 855 REMARK 3 DIHEDRAL : 10.650 3942 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6AYV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-SEP-17. REMARK 100 THE DEPOSITION ID IS D_1000230017. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-DEC-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97856 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : MOLREP REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33376 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 23.70 REMARK 200 R MERGE (I) : 0.12500 REMARK 200 R SYM (I) : 0.12500 REMARK 200 FOR THE DATA SET : 55.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 21.40 REMARK 200 R MERGE FOR SHELL (I) : 2.31400 REMARK 200 R SYM FOR SHELL (I) : 2.31400 REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 3D1R REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.4 M SODIUM MALONATE PH 6.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.04967 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 96.09933 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 72.07450 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 120.12417 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 24.02483 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 48.04967 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 96.09933 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 120.12417 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 72.07450 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 24.02483 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 18980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 45030 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -55.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 65.62000 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 113.65717 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -24.02483 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 GLY A 319 REMARK 465 ASP A 320 REMARK 465 SER A 321 REMARK 465 SER A 322 REMARK 465 ALA A 323 REMARK 465 VAL A 324 REMARK 465 TYR A 325 REMARK 465 PRO A 326 REMARK 465 LEU A 327 REMARK 465 PRO A 328 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 GLU B 311 REMARK 465 TYR B 312 REMARK 465 SER B 313 REMARK 465 ALA B 314 REMARK 465 ILE B 315 REMARK 465 ASP B 316 REMARK 465 PHE B 317 REMARK 465 THR B 318 REMARK 465 GLY B 319 REMARK 465 ASP B 320 REMARK 465 SER B 321 REMARK 465 SER B 322 REMARK 465 ALA B 323 REMARK 465 VAL B 324 REMARK 465 TYR B 325 REMARK 465 PRO B 326 REMARK 465 LEU B 327 REMARK 465 PRO B 328 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 82 O HOH A 501 1.96 REMARK 500 O VAL B 169 O HOH B 501 2.03 REMARK 500 OD1 ASP A 102 O HOH A 502 2.13 REMARK 500 O GLY B 281 O HOH B 502 2.16 REMARK 500 NH1 ARG A 139 O HOH A 503 2.17 REMARK 500 N ALA A 185 O HOH A 501 2.17 REMARK 500 NH2 ARG A 170 O HOH A 504 2.18 REMARK 500 ND1 HIS A 286 O HOH A 505 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 194 64.91 -110.47 REMARK 500 LEU A 245 0.88 -65.18 REMARK 500 LEU A 306 70.64 -119.99 REMARK 500 SER A 307 -133.54 -132.86 REMARK 500 LYS A 308 135.79 79.87 REMARK 500 ASN A 310 74.20 18.52 REMARK 500 ASN B 93 32.32 70.77 REMARK 500 PHE B 107 152.29 -49.12 REMARK 500 LYS B 308 87.15 -152.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 79 OD2 REMARK 620 2 ASP A 82 OD1 96.9 REMARK 620 3 GLU A 208 OE2 102.0 114.2 REMARK 620 4 HOH A 587 O 97.1 136.5 102.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 406 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 189 O REMARK 620 2 ALA A 190 O 79.6 REMARK 620 3 ARG A 192 O 95.6 110.0 REMARK 620 4 SER A 195 OG 57.8 131.7 96.8 REMARK 620 5 THR A 197 O 82.6 81.8 167.6 71.8 REMARK 620 6 HOH A 510 O 147.4 119.3 101.3 92.3 74.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 79 OD2 REMARK 620 2 ASP B 82 OD1 98.2 REMARK 620 3 GLU B 208 OE2 106.4 115.1 REMARK 620 4 HOH B 605 O 106.4 134.9 93.6 REMARK 620 N 1 2 3 DBREF 6AYV A 1 328 UNP P9WN20 GLPX_MYCTO 35 362 DBREF 6AYV B 1 328 UNP P9WN20 GLPX_MYCTO 35 362 SEQADV 6AYV GLY A -18 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV SER A -17 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV SER A -16 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV HIS A -15 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV HIS A -14 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV HIS A -13 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV HIS A -12 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV HIS A -11 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV HIS A -10 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV SER A -9 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV SER A -8 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV GLY A -7 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV LEU A -6 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV VAL A -5 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV PRO A -4 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV ARG A -3 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV GLY A -2 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV SER A -1 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV HIS A 0 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV ALA A 84 UNP P9WN20 THR 118 ENGINEERED MUTATION SEQADV 6AYV GLY B -18 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV SER B -17 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV SER B -16 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV HIS B -15 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV HIS B -14 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV HIS B -13 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV HIS B -12 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV HIS B -11 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV HIS B -10 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV SER B -9 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV SER B -8 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV GLY B -7 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV LEU B -6 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV VAL B -5 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV PRO B -4 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV ARG B -3 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV GLY B -2 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV SER B -1 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV HIS B 0 UNP P9WN20 EXPRESSION TAG SEQADV 6AYV ALA B 84 UNP P9WN20 THR 118 ENGINEERED MUTATION SEQRES 1 A 347 GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY LEU SEQRES 2 A 347 VAL PRO ARG GLY SER HIS MET GLU LEU VAL ARG VAL THR SEQRES 3 A 347 GLU ALA GLY ALA MET ALA ALA GLY ARG TRP VAL GLY ARG SEQRES 4 A 347 GLY ASP LYS GLU GLY GLY ASP GLY ALA ALA VAL ASP ALA SEQRES 5 A 347 MET ARG GLU LEU VAL ASN SER VAL SER MET ARG GLY VAL SEQRES 6 A 347 VAL VAL ILE GLY GLU GLY GLU LYS ASP HIS ALA PRO MET SEQRES 7 A 347 LEU TYR ASN GLY GLU GLU VAL GLY ASN GLY ASP GLY PRO SEQRES 8 A 347 GLU CYS ASP PHE ALA VAL ASP PRO ILE ASP GLY ALA THR SEQRES 9 A 347 LEU MET SER LYS GLY MET THR ASN ALA ILE SER VAL LEU SEQRES 10 A 347 ALA VAL ALA ASP ARG GLY THR MET PHE ASP PRO SER ALA SEQRES 11 A 347 VAL PHE TYR MET ASN LYS ILE ALA VAL GLY PRO ASP ALA SEQRES 12 A 347 ALA HIS VAL LEU ASP ILE THR ALA PRO ILE SER GLU ASN SEQRES 13 A 347 ILE ARG ALA VAL ALA LYS VAL LYS ASP LEU SER VAL ARG SEQRES 14 A 347 ASP MET THR VAL CYS ILE LEU ASP ARG PRO ARG HIS ALA SEQRES 15 A 347 GLN LEU ILE HIS ASP VAL ARG ALA THR GLY ALA ARG ILE SEQRES 16 A 347 ARG LEU ILE THR ASP GLY ASP VAL ALA GLY ALA ILE SER SEQRES 17 A 347 ALA CYS ARG PRO HIS SER GLY THR ASP LEU LEU ALA GLY SEQRES 18 A 347 ILE GLY GLY THR PRO GLU GLY ILE ILE ALA ALA ALA ALA SEQRES 19 A 347 ILE ARG CYS MET GLY GLY ALA ILE GLN ALA GLN LEU ALA SEQRES 20 A 347 PRO ARG ASP ASP ALA GLU ARG ARG LYS ALA LEU GLU ALA SEQRES 21 A 347 GLY TYR ASP LEU ASN GLN VAL LEU THR THR GLU ASP LEU SEQRES 22 A 347 VAL SER GLY GLU ASN VAL PHE PHE CYS ALA THR GLY VAL SEQRES 23 A 347 THR ASP GLY ASP LEU LEU LYS GLY VAL ARG TYR TYR PRO SEQRES 24 A 347 GLY GLY CYS THR THR HIS SER ILE VAL MET ARG SER LYS SEQRES 25 A 347 SER GLY THR VAL ARG MET ILE GLU ALA TYR HIS ARG LEU SEQRES 26 A 347 SER LYS LEU ASN GLU TYR SER ALA ILE ASP PHE THR GLY SEQRES 27 A 347 ASP SER SER ALA VAL TYR PRO LEU PRO SEQRES 1 B 347 GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY LEU SEQRES 2 B 347 VAL PRO ARG GLY SER HIS MET GLU LEU VAL ARG VAL THR SEQRES 3 B 347 GLU ALA GLY ALA MET ALA ALA GLY ARG TRP VAL GLY ARG SEQRES 4 B 347 GLY ASP LYS GLU GLY GLY ASP GLY ALA ALA VAL ASP ALA SEQRES 5 B 347 MET ARG GLU LEU VAL ASN SER VAL SER MET ARG GLY VAL SEQRES 6 B 347 VAL VAL ILE GLY GLU GLY GLU LYS ASP HIS ALA PRO MET SEQRES 7 B 347 LEU TYR ASN GLY GLU GLU VAL GLY ASN GLY ASP GLY PRO SEQRES 8 B 347 GLU CYS ASP PHE ALA VAL ASP PRO ILE ASP GLY ALA THR SEQRES 9 B 347 LEU MET SER LYS GLY MET THR ASN ALA ILE SER VAL LEU SEQRES 10 B 347 ALA VAL ALA ASP ARG GLY THR MET PHE ASP PRO SER ALA SEQRES 11 B 347 VAL PHE TYR MET ASN LYS ILE ALA VAL GLY PRO ASP ALA SEQRES 12 B 347 ALA HIS VAL LEU ASP ILE THR ALA PRO ILE SER GLU ASN SEQRES 13 B 347 ILE ARG ALA VAL ALA LYS VAL LYS ASP LEU SER VAL ARG SEQRES 14 B 347 ASP MET THR VAL CYS ILE LEU ASP ARG PRO ARG HIS ALA SEQRES 15 B 347 GLN LEU ILE HIS ASP VAL ARG ALA THR GLY ALA ARG ILE SEQRES 16 B 347 ARG LEU ILE THR ASP GLY ASP VAL ALA GLY ALA ILE SER SEQRES 17 B 347 ALA CYS ARG PRO HIS SER GLY THR ASP LEU LEU ALA GLY SEQRES 18 B 347 ILE GLY GLY THR PRO GLU GLY ILE ILE ALA ALA ALA ALA SEQRES 19 B 347 ILE ARG CYS MET GLY GLY ALA ILE GLN ALA GLN LEU ALA SEQRES 20 B 347 PRO ARG ASP ASP ALA GLU ARG ARG LYS ALA LEU GLU ALA SEQRES 21 B 347 GLY TYR ASP LEU ASN GLN VAL LEU THR THR GLU ASP LEU SEQRES 22 B 347 VAL SER GLY GLU ASN VAL PHE PHE CYS ALA THR GLY VAL SEQRES 23 B 347 THR ASP GLY ASP LEU LEU LYS GLY VAL ARG TYR TYR PRO SEQRES 24 B 347 GLY GLY CYS THR THR HIS SER ILE VAL MET ARG SER LYS SEQRES 25 B 347 SER GLY THR VAL ARG MET ILE GLU ALA TYR HIS ARG LEU SEQRES 26 B 347 SER LYS LEU ASN GLU TYR SER ALA ILE ASP PHE THR GLY SEQRES 27 B 347 ASP SER SER ALA VAL TYR PRO LEU PRO HET F6P A 401 16 HET MG A 402 1 HET GOL A 403 6 HET GOL A 404 6 HET GOL A 405 6 HET MG A 406 1 HET GOL A 407 6 HET GOL A 408 6 HET MLI A 409 7 HET GOL A 410 6 HET GOL A 411 6 HET F6P B 401 16 HET GOL B 402 6 HET MG B 403 1 HET GOL B 404 6 HET GOL B 405 6 HET GOL B 406 6 HETNAM F6P 6-O-PHOSPHONO-BETA-D-FRUCTOFURANOSE HETNAM MG MAGNESIUM ION HETNAM GOL GLYCEROL HETNAM MLI MALONATE ION HETSYN F6P FRUCTOSE-6-PHOSPHATE; 6-O-PHOSPHONO-BETA-D-FRUCTOSE; 6- HETSYN 2 F6P O-PHOSPHONO-D-FRUCTOSE; 6-O-PHOSPHONO-FRUCTOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 F6P 2(C6 H13 O9 P) FORMUL 4 MG 3(MG 2+) FORMUL 5 GOL 11(C3 H8 O3) FORMUL 11 MLI C3 H2 O4 2- FORMUL 20 HOH *303(H2 O) HELIX 1 AA1 HIS A 0 GLU A 2 5 3 HELIX 2 AA2 LEU A 3 ARG A 16 1 14 HELIX 3 AA3 ASP A 22 ASN A 39 1 18 HELIX 4 AA4 GLY A 83 GLY A 90 1 8 HELIX 5 AA5 GLY A 121 ALA A 125 5 5 HELIX 6 AA6 PRO A 133 LYS A 145 1 13 HELIX 7 AA7 SER A 148 ASP A 151 5 4 HELIX 8 AA8 ARG A 159 ARG A 161 5 3 HELIX 9 AA9 HIS A 162 GLY A 173 1 12 HELIX 10 AB1 GLY A 182 ARG A 192 1 11 HELIX 11 AB2 THR A 206 GLY A 220 1 15 HELIX 12 AB3 ASP A 231 ALA A 241 1 11 HELIX 13 AB4 THR A 250 VAL A 255 1 6 HELIX 14 AB5 HIS B 0 GLU B 2 5 3 HELIX 15 AB6 LEU B 3 TRP B 17 1 15 HELIX 16 AB7 ASP B 22 ASN B 39 1 18 HELIX 17 AB8 GLY B 83 GLY B 90 1 8 HELIX 18 AB9 ALA B 124 LEU B 128 5 5 HELIX 19 AC1 PRO B 133 ASP B 146 1 14 HELIX 20 AC2 SER B 148 ASP B 151 5 4 HELIX 21 AC3 ARG B 159 ARG B 161 5 3 HELIX 22 AC4 HIS B 162 GLY B 173 1 12 HELIX 23 AC5 GLY B 182 ARG B 192 1 11 HELIX 24 AC6 THR B 206 GLY B 220 1 15 HELIX 25 AC7 ASP B 231 GLU B 240 1 10 HELIX 26 AC8 THR B 250 VAL B 255 1 6 SHEET 1 AA1 7 GLU A 65 VAL A 66 0 SHEET 2 AA1 7 ARG A 44 ILE A 49 -1 N GLY A 45 O VAL A 66 SHEET 3 AA1 7 GLU A 73 ASP A 79 1 O PHE A 76 N VAL A 48 SHEET 4 AA1 7 ILE A 95 ASP A 102 -1 O ALA A 99 N ALA A 77 SHEET 5 AA1 7 VAL A 260 GLY A 266 -1 O PHE A 261 N VAL A 100 SHEET 6 AA1 7 GLY A 282 ARG A 291 -1 O HIS A 286 N GLY A 266 SHEET 7 AA1 7 ARG A 277 TYR A 278 -1 N ARG A 277 O THR A 284 SHEET 1 AA2 7 GLU A 65 VAL A 66 0 SHEET 2 AA2 7 ARG A 44 ILE A 49 -1 N GLY A 45 O VAL A 66 SHEET 3 AA2 7 GLU A 73 ASP A 79 1 O PHE A 76 N VAL A 48 SHEET 4 AA2 7 ILE A 95 ASP A 102 -1 O ALA A 99 N ALA A 77 SHEET 5 AA2 7 VAL A 260 GLY A 266 -1 O PHE A 261 N VAL A 100 SHEET 6 AA2 7 GLY A 282 ARG A 291 -1 O HIS A 286 N GLY A 266 SHEET 7 AA2 7 VAL A 297 ARG A 305 -1 O HIS A 304 N CYS A 283 SHEET 1 AA3 5 ARG A 175 ILE A 179 0 SHEET 2 AA3 5 THR A 153 LEU A 157 1 N VAL A 154 O ARG A 177 SHEET 3 AA3 5 LEU A 199 GLY A 205 1 O LEU A 199 N CYS A 155 SHEET 4 AA3 5 TYR A 114 VAL A 120 -1 N MET A 115 O GLY A 204 SHEET 5 AA3 5 ALA A 222 LEU A 227 -1 O GLN A 226 N ASN A 116 SHEET 1 AA4 7 GLU B 65 VAL B 66 0 SHEET 2 AA4 7 ARG B 44 ILE B 49 -1 N GLY B 45 O VAL B 66 SHEET 3 AA4 7 GLU B 73 ASP B 79 1 O PHE B 76 N VAL B 48 SHEET 4 AA4 7 ILE B 95 ASP B 102 -1 O ALA B 99 N ALA B 77 SHEET 5 AA4 7 PHE B 261 GLY B 266 -1 O THR B 265 N SER B 96 SHEET 6 AA4 7 GLY B 282 ARG B 291 -1 O ILE B 288 N ALA B 264 SHEET 7 AA4 7 ARG B 277 TYR B 278 -1 N ARG B 277 O THR B 284 SHEET 1 AA5 7 GLU B 65 VAL B 66 0 SHEET 2 AA5 7 ARG B 44 ILE B 49 -1 N GLY B 45 O VAL B 66 SHEET 3 AA5 7 GLU B 73 ASP B 79 1 O PHE B 76 N VAL B 48 SHEET 4 AA5 7 ILE B 95 ASP B 102 -1 O ALA B 99 N ALA B 77 SHEET 5 AA5 7 PHE B 261 GLY B 266 -1 O THR B 265 N SER B 96 SHEET 6 AA5 7 GLY B 282 ARG B 291 -1 O ILE B 288 N ALA B 264 SHEET 7 AA5 7 VAL B 297 ARG B 305 -1 O ARG B 298 N VAL B 289 SHEET 1 AA6 5 ARG B 175 ILE B 179 0 SHEET 2 AA6 5 THR B 153 LEU B 157 1 N VAL B 154 O ARG B 177 SHEET 3 AA6 5 LEU B 199 GLY B 205 1 O LEU B 199 N CYS B 155 SHEET 4 AA6 5 TYR B 114 VAL B 120 -1 N MET B 115 O GLY B 204 SHEET 5 AA6 5 ALA B 222 ALA B 228 -1 O ALA B 228 N TYR B 114 LINK OD2 ASP A 79 MG MG A 402 1555 1555 2.48 LINK OD1 ASP A 82 MG MG A 402 1555 1555 2.44 LINK O SER A 189 MG MG A 406 1555 1555 2.76 LINK O ALA A 190 MG MG A 406 1555 1555 2.60 LINK O ARG A 192 MG MG A 406 1555 1555 1.99 LINK OG SER A 195 MG MG A 406 1555 1555 2.65 LINK O THR A 197 MG MG A 406 1555 1555 2.60 LINK OE2 GLU A 208 MG MG A 402 1555 1555 2.80 LINK MG MG A 402 O HOH A 587 1555 1555 2.74 LINK MG MG A 406 O HOH A 510 1555 1555 2.59 LINK OD2 ASP B 79 MG MG B 403 1555 1555 2.41 LINK OD1 ASP B 82 MG MG B 403 1555 1555 2.62 LINK OE2 GLU B 208 MG MG B 403 1555 1555 2.62 LINK MG MG B 403 O HOH B 605 1555 1555 2.95 CISPEP 1 LEU A 306 SER A 307 0 -13.82 CRYST1 131.240 131.240 144.149 90.00 90.00 120.00 P 61 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007620 0.004399 0.000000 0.00000 SCALE2 0.000000 0.008798 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006937 0.00000