HEADER HYDROLASE 09-SEP-17 6AZ0 TITLE MITOCHONDRIAL ATPASE PROTEASE YME1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MITOCHONDRIAL INNER MEMBRANE I-AAA PROTEASE SUPERCOMPLEX COMPND 3 SUBUNIT YME1; COMPND 4 CHAIN: A, B, C, D, E, F; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: WALKER B MUTANT; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: POLY(UNK); COMPND 9 CHAIN: G; COMPND 10 OTHER_DETAILS: UNKNOWN POLYPEPTIDE SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE (STRAIN RM11-1A); SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 285006; SOURCE 5 STRAIN: RM11-1A; SOURCE 6 GENE: SCRG_02514; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 11 ORGANISM_TAXID: 562 KEYWDS MITOCHONDRIAL, ATPASE, PROTEASE, HYDROLASE EXPDTA ELECTRON MICROSCOPY NUMMDL 5 AUTHOR C.PUCHADES,A.J.RAMPELLO,M.SHIN,C.GIULIANO,R.L.WISEMAN,S.E.GLYNN, AUTHOR 2 G.C.LANDER REVDAT 5 13-MAR-24 6AZ0 1 REMARK REVDAT 4 18-DEC-19 6AZ0 1 SCALE REVDAT 3 11-DEC-19 6AZ0 1 REMARK REVDAT 2 06-DEC-17 6AZ0 1 CRYST1 REVDAT 1 15-NOV-17 6AZ0 0 JRNL AUTH C.PUCHADES,A.J.RAMPELLO,M.SHIN,C.J.GIULIANO,R.L.WISEMAN, JRNL AUTH 2 S.E.GLYNN,G.C.LANDER JRNL TITL STRUCTURE OF THE MITOCHONDRIAL INNER MEMBRANE AAA+ PROTEASE JRNL TITL 2 YME1 GIVES INSIGHT INTO SUBSTRATE PROCESSING. JRNL REF SCIENCE V. 358 2017 JRNL REFN ESSN 1095-9203 JRNL PMID 29097521 JRNL DOI 10.1126/SCIENCE.AAO0464 REMARK 2 REMARK 2 RESOLUTION. 3.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : FINDEM, LEGINON, RELION, RELION, REMARK 3 RELION, RELION, ROSETTA, PHENIX REMARK 3 RECONSTRUCTION SCHEMA : BACK PROJECTION REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : AB INITIO MODEL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : 100.000 REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.400 REMARK 3 NUMBER OF PARTICLES : 62917 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING ONLY REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6AZ0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-SEP-17. REMARK 100 THE DEPOSITION ID IS D_1000228441. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : YME1 ATPASE PROTEASE WALKER B REMARK 245 MUTANT BOUND TO SUBSTRATE REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : GATAN SOLARUS PLASMA CLEANER REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 8.00 REMARK 245 SAMPLE DETAILS : YME1 WALKER B MUTANT WAS REMARK 245 RECOMBINANTLY EXPRESSED IN E. COLI, SOLVED IN PRESENCE OF ATP REMARK 245 WITH UNKNOWN BOUND SUBSTRATE. REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 6098 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : 1200.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 2500.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : 2.70 REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 6000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : 29000 REMARK 245 CALIBRATED MAGNIFICATION : 51500 REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : DATA COLLECTED USING LEGINON REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEPTAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP F 618 ZN ZN F 801 1.67 REMARK 500 OG1 THR E 584 OE1 GLU E 587 2.02 REMARK 500 O LYS A 392 OH TYR E 354 2.04 REMARK 500 OG SER E 636 OE1 GLU E 662 2.06 REMARK 500 OG SER B 483 OE1 GLU B 486 2.08 REMARK 500 OD2 ASP D 471 OG1 THR D 473 2.09 REMARK 500 OD1 ASP D 383 OG1 THR D 423 2.11 REMARK 500 OE1 GLN B 620 ND2 ASN C 643 2.12 REMARK 500 OD2 ASP E 468 OG SER E 505 2.13 REMARK 500 NH2 ARG E 438 O2G ATP D 803 2.16 REMARK 500 OD1 ASP E 516 OH TYR E 558 2.17 REMARK 500 OD2 ASP B 409 NH2 ARG B 435 2.17 REMARK 500 O MET C 547 OG1 THR C 551 2.18 REMARK 500 N LYS D 315 OD2 ASP D 440 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 2 CYS F 615 CA - CB - SG ANGL. DEV. = 7.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 302 73.49 -116.06 REMARK 500 1 THR A 479 73.48 -116.77 REMARK 500 1 LYS A 559 148.52 -172.44 REMARK 500 1 LEU A 563 108.59 -56.68 REMARK 500 1 ARG A 565 -163.86 -118.79 REMARK 500 1 ARG A 567 -34.31 -130.01 REMARK 500 1 MET A 578 -0.75 60.71 REMARK 500 1 ASP A 582 159.22 177.86 REMARK 500 1 MET A 635 48.49 -94.66 REMARK 500 1 PRO B 322 -177.24 -67.87 REMARK 500 1 GLU B 352 -163.12 -160.89 REMARK 500 1 GLN B 381 65.92 61.25 REMARK 500 1 TYR B 396 -0.90 77.20 REMARK 500 1 LYS B 441 114.82 -163.96 REMARK 500 1 SER B 483 -166.92 -79.40 REMARK 500 1 ASN B 502 49.46 36.84 REMARK 500 1 MET B 527 112.20 -160.82 REMARK 500 1 THR B 530 -166.45 -78.55 REMARK 500 1 LEU B 563 108.33 -49.14 REMARK 500 1 GLU B 577 -73.63 -62.38 REMARK 500 1 MET B 578 157.91 175.22 REMARK 500 1 ASP B 579 -7.10 73.68 REMARK 500 1 SER B 652 -169.23 -73.84 REMARK 500 1 ASP C 351 65.80 60.02 REMARK 500 1 ALA C 373 -176.21 -172.86 REMARK 500 1 GLN C 381 65.16 60.20 REMARK 500 1 GLN C 394 49.05 -93.33 REMARK 500 1 ALA C 395 -11.86 69.72 REMARK 500 1 LYS C 398 39.02 -98.41 REMARK 500 1 ASP C 409 62.33 64.12 REMARK 500 1 PHE C 439 68.55 61.24 REMARK 500 1 ASN C 469 32.04 -95.97 REMARK 500 1 THR C 479 73.35 -117.54 REMARK 500 1 SER C 483 -167.45 -79.20 REMARK 500 1 LEU C 569 33.65 -94.37 REMARK 500 1 ASP C 579 41.52 35.21 REMARK 500 1 ASN C 610 36.89 -99.76 REMARK 500 1 PRO C 641 44.11 -87.19 REMARK 500 1 SER C 652 -166.02 -78.10 REMARK 500 1 TYR C 695 70.77 59.08 REMARK 500 1 CYS D 286 60.68 60.27 REMARK 500 1 ALA D 373 -179.63 -62.20 REMARK 500 1 PRO D 391 63.44 -69.35 REMARK 500 1 ASP D 393 24.89 -141.87 REMARK 500 1 ALA D 395 -156.87 -150.19 REMARK 500 1 THR D 423 143.36 -172.03 REMARK 500 1 LYS D 463 27.69 48.32 REMARK 500 1 ASP D 468 -164.95 -77.10 REMARK 500 1 ASN D 469 -13.10 72.70 REMARK 500 1 THR D 526 -156.46 -149.90 REMARK 500 REMARK 500 THIS ENTRY HAS 401 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LEU A 447 PRO A 448 2 -143.57 REMARK 500 SER F 415 GLY F 416 2 -145.12 REMARK 500 GLY F 416 ILE F 417 2 -140.56 REMARK 500 ILE F 417 ILE F 418 2 -142.80 REMARK 500 ASP A 579 LYS A 580 3 -131.16 REMARK 500 VAL A 581 ASP A 582 3 146.27 REMARK 500 ALA F 373 PRO F 374 3 121.97 REMARK 500 THR F 697 LEU F 698 3 145.43 REMARK 500 LEU A 447 PRO A 448 4 -148.16 REMARK 500 ASP C 579 LYS C 580 4 -143.39 REMARK 500 LYS C 580 VAL C 581 4 146.48 REMARK 500 THR E 631 GLN E 632 4 -55.79 REMARK 500 ASP F 446 LEU F 447 4 143.76 REMARK 500 ILE F 571 THR F 572 4 -141.28 REMARK 500 LYS A 580 VAL A 581 5 134.46 REMARK 500 ASP A 582 ILE A 583 5 139.50 REMARK 500 ALA E 467 ASP E 468 5 127.53 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 802 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 540 NE2 REMARK 620 2 HIS A 544 NE2 86.8 REMARK 620 3 ASP A 618 OD1 147.6 103.6 REMARK 620 4 ASP A 618 OD2 96.0 94.7 53.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 803 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ATP A 801 O2G REMARK 620 2 ATP A 801 O3G 74.2 REMARK 620 3 ATP A 801 O2B 84.2 80.3 REMARK 620 4 ATP A 801 O2A 63.9 123.6 60.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 803 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 380 OD2 REMARK 620 2 ATP B 801 O2B 166.8 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 802 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 540 NE2 REMARK 620 2 HIS B 544 NE2 87.0 REMARK 620 3 ASP B 618 OD1 166.9 105.5 REMARK 620 4 ASP B 618 OD2 116.5 108.7 56.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 803 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR C 328 OG1 REMARK 620 2 ATP C 801 O2B 108.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 802 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 540 NE2 REMARK 620 2 HIS C 544 NE2 88.4 REMARK 620 3 ASP C 618 OD1 150.5 106.3 REMARK 620 4 ASP C 618 OD2 95.4 94.4 58.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 802 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR D 328 OG1 REMARK 620 2 ATP D 803 O2B 93.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 801 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 540 NE2 REMARK 620 2 HIS D 544 NE2 97.5 REMARK 620 3 ASP D 618 OD2 128.8 88.6 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN E 802 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS E 540 NE2 REMARK 620 2 HIS E 544 NE2 87.5 REMARK 620 3 ASP E 618 OD1 167.9 104.0 REMARK 620 4 ASP E 618 OD2 115.5 105.5 58.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN F 801 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS F 540 NE2 REMARK 620 2 HIS F 544 NE2 81.2 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ATP A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ATP B 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ATP C 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN D 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG D 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ATP D 803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP E 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN E 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN F 801 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-7023 RELATED DB: EMDB REMARK 900 MITOCHONDRIAL ATPASE PROTEASE YME1 DBREF 6AZ0 A 279 717 UNP B3LL85 B3LL85_YEAS1 279 717 DBREF 6AZ0 B 279 717 UNP B3LL85 B3LL85_YEAS1 279 717 DBREF 6AZ0 C 279 717 UNP B3LL85 B3LL85_YEAS1 279 717 DBREF 6AZ0 D 279 717 UNP B3LL85 B3LL85_YEAS1 279 717 DBREF 6AZ0 E 279 717 UNP B3LL85 B3LL85_YEAS1 279 717 DBREF 6AZ0 F 279 717 UNP B3LL85 B3LL85_YEAS1 279 717 DBREF 6AZ0 G 5 14 PDB 6AZ0 6AZ0 5 14 SEQADV 6AZ0 GLN A 381 UNP B3LL85 GLU 381 CONFLICT SEQADV 6AZ0 GLU A 647 UNP B3LL85 ASN 647 CONFLICT SEQADV 6AZ0 ALA A 713 UNP B3LL85 ASP 713 CONFLICT SEQADV 6AZ0 GLN B 381 UNP B3LL85 GLU 381 CONFLICT SEQADV 6AZ0 GLU B 647 UNP B3LL85 ASN 647 CONFLICT SEQADV 6AZ0 ALA B 713 UNP B3LL85 ASP 713 CONFLICT SEQADV 6AZ0 GLN C 381 UNP B3LL85 GLU 381 CONFLICT SEQADV 6AZ0 GLU C 647 UNP B3LL85 ASN 647 CONFLICT SEQADV 6AZ0 ALA C 713 UNP B3LL85 ASP 713 CONFLICT SEQADV 6AZ0 GLN D 381 UNP B3LL85 GLU 381 CONFLICT SEQADV 6AZ0 GLU D 647 UNP B3LL85 ASN 647 CONFLICT SEQADV 6AZ0 ALA D 713 UNP B3LL85 ASP 713 CONFLICT SEQADV 6AZ0 GLN E 381 UNP B3LL85 GLU 381 CONFLICT SEQADV 6AZ0 GLU E 647 UNP B3LL85 ASN 647 CONFLICT SEQADV 6AZ0 ALA E 713 UNP B3LL85 ASP 713 CONFLICT SEQADV 6AZ0 GLN F 381 UNP B3LL85 GLU 381 CONFLICT SEQADV 6AZ0 GLU F 647 UNP B3LL85 ASN 647 CONFLICT SEQADV 6AZ0 ALA F 713 UNP B3LL85 ASP 713 CONFLICT SEQRES 1 A 439 LYS PHE ASP ASP VAL CYS GLY CYS ASP GLU ALA ARG ALA SEQRES 2 A 439 GLU LEU GLU GLU ILE VAL ASP PHE LEU LYS ASP PRO THR SEQRES 3 A 439 LYS TYR GLU SER LEU GLY GLY LYS LEU PRO LYS GLY VAL SEQRES 4 A 439 LEU LEU THR GLY PRO PRO GLY THR GLY LYS THR LEU LEU SEQRES 5 A 439 ALA ARG ALA THR ALA GLY GLU ALA GLY VAL ASP PHE PHE SEQRES 6 A 439 PHE MET SER GLY SER GLU PHE ASP GLU VAL TYR VAL GLY SEQRES 7 A 439 VAL GLY ALA LYS ARG ILE ARG ASP LEU PHE ALA GLN ALA SEQRES 8 A 439 ARG SER ARG ALA PRO ALA ILE ILE PHE ILE ASP GLN LEU SEQRES 9 A 439 ASP ALA ILE GLY GLY LYS ARG ASN PRO LYS ASP GLN ALA SEQRES 10 A 439 TYR ALA LYS GLN THR LEU ASN GLN LEU LEU VAL GLU LEU SEQRES 11 A 439 ASP GLY PHE SER GLN THR SER GLY ILE ILE ILE ILE GLY SEQRES 12 A 439 ALA THR ASN PHE PRO GLU ALA LEU ASP LYS ALA LEU THR SEQRES 13 A 439 ARG PRO GLY ARG PHE ASP LYS VAL VAL ASN VAL ASP LEU SEQRES 14 A 439 PRO ASP VAL ARG GLY ARG ALA ASP ILE LEU LYS HIS HIS SEQRES 15 A 439 MET LYS LYS ILE THR LEU ALA ASP ASN VAL ASP PRO THR SEQRES 16 A 439 ILE ILE ALA ARG GLY THR PRO GLY LEU SER GLY ALA GLU SEQRES 17 A 439 LEU ALA ASN LEU VAL ASN GLN ALA ALA VAL TYR ALA CYS SEQRES 18 A 439 GLN LYS ASN ALA VAL SER VAL ASP MET SER HIS PHE GLU SEQRES 19 A 439 TRP ALA LYS ASP LYS ILE LEU MET GLY ALA GLU ARG LYS SEQRES 20 A 439 THR MET VAL LEU THR ASP ALA ALA ARG LYS ALA THR ALA SEQRES 21 A 439 PHE HIS GLU ALA GLY HIS ALA ILE MET ALA LYS TYR THR SEQRES 22 A 439 ASN GLY ALA THR PRO LEU TYR LYS ALA THR ILE LEU PRO SEQRES 23 A 439 ARG GLY ARG ALA LEU GLY ILE THR PHE GLN LEU PRO GLU SEQRES 24 A 439 MET ASP LYS VAL ASP ILE THR LYS ARG GLU CYS GLN ALA SEQRES 25 A 439 ARG LEU ASP VAL CYS MET GLY GLY LYS ILE ALA GLU GLU SEQRES 26 A 439 LEU ILE TYR GLY LYS ASP ASN THR THR SER GLY CYS GLY SEQRES 27 A 439 SER ASP LEU GLN SER ALA THR GLY THR ALA ARG ALA MET SEQRES 28 A 439 VAL THR GLN TYR GLY MET SER ASP ASP VAL GLY PRO VAL SEQRES 29 A 439 ASN LEU SER GLU GLU TRP GLU SER TRP SER ASN LYS ILE SEQRES 30 A 439 ARG ASP ILE ALA ASP ASN GLU VAL ILE GLU LEU LEU LYS SEQRES 31 A 439 ASP SER GLU GLU ARG ALA ARG ARG LEU LEU THR LYS LYS SEQRES 32 A 439 ASN VAL GLU LEU HIS ARG LEU ALA GLN GLY LEU ILE GLU SEQRES 33 A 439 TYR GLU THR LEU ASP ALA HIS GLU ILE GLU GLN VAL CYS SEQRES 34 A 439 LYS GLY GLU LYS LEU ALA LYS LEU LYS THR SEQRES 1 B 439 LYS PHE ASP ASP VAL CYS GLY CYS ASP GLU ALA ARG ALA SEQRES 2 B 439 GLU LEU GLU GLU ILE VAL ASP PHE LEU LYS ASP PRO THR SEQRES 3 B 439 LYS TYR GLU SER LEU GLY GLY LYS LEU PRO LYS GLY VAL SEQRES 4 B 439 LEU LEU THR GLY PRO PRO GLY THR GLY LYS THR LEU LEU SEQRES 5 B 439 ALA ARG ALA THR ALA GLY GLU ALA GLY VAL ASP PHE PHE SEQRES 6 B 439 PHE MET SER GLY SER GLU PHE ASP GLU VAL TYR VAL GLY SEQRES 7 B 439 VAL GLY ALA LYS ARG ILE ARG ASP LEU PHE ALA GLN ALA SEQRES 8 B 439 ARG SER ARG ALA PRO ALA ILE ILE PHE ILE ASP GLN LEU SEQRES 9 B 439 ASP ALA ILE GLY GLY LYS ARG ASN PRO LYS ASP GLN ALA SEQRES 10 B 439 TYR ALA LYS GLN THR LEU ASN GLN LEU LEU VAL GLU LEU SEQRES 11 B 439 ASP GLY PHE SER GLN THR SER GLY ILE ILE ILE ILE GLY SEQRES 12 B 439 ALA THR ASN PHE PRO GLU ALA LEU ASP LYS ALA LEU THR SEQRES 13 B 439 ARG PRO GLY ARG PHE ASP LYS VAL VAL ASN VAL ASP LEU SEQRES 14 B 439 PRO ASP VAL ARG GLY ARG ALA ASP ILE LEU LYS HIS HIS SEQRES 15 B 439 MET LYS LYS ILE THR LEU ALA ASP ASN VAL ASP PRO THR SEQRES 16 B 439 ILE ILE ALA ARG GLY THR PRO GLY LEU SER GLY ALA GLU SEQRES 17 B 439 LEU ALA ASN LEU VAL ASN GLN ALA ALA VAL TYR ALA CYS SEQRES 18 B 439 GLN LYS ASN ALA VAL SER VAL ASP MET SER HIS PHE GLU SEQRES 19 B 439 TRP ALA LYS ASP LYS ILE LEU MET GLY ALA GLU ARG LYS SEQRES 20 B 439 THR MET VAL LEU THR ASP ALA ALA ARG LYS ALA THR ALA SEQRES 21 B 439 PHE HIS GLU ALA GLY HIS ALA ILE MET ALA LYS TYR THR SEQRES 22 B 439 ASN GLY ALA THR PRO LEU TYR LYS ALA THR ILE LEU PRO SEQRES 23 B 439 ARG GLY ARG ALA LEU GLY ILE THR PHE GLN LEU PRO GLU SEQRES 24 B 439 MET ASP LYS VAL ASP ILE THR LYS ARG GLU CYS GLN ALA SEQRES 25 B 439 ARG LEU ASP VAL CYS MET GLY GLY LYS ILE ALA GLU GLU SEQRES 26 B 439 LEU ILE TYR GLY LYS ASP ASN THR THR SER GLY CYS GLY SEQRES 27 B 439 SER ASP LEU GLN SER ALA THR GLY THR ALA ARG ALA MET SEQRES 28 B 439 VAL THR GLN TYR GLY MET SER ASP ASP VAL GLY PRO VAL SEQRES 29 B 439 ASN LEU SER GLU GLU TRP GLU SER TRP SER ASN LYS ILE SEQRES 30 B 439 ARG ASP ILE ALA ASP ASN GLU VAL ILE GLU LEU LEU LYS SEQRES 31 B 439 ASP SER GLU GLU ARG ALA ARG ARG LEU LEU THR LYS LYS SEQRES 32 B 439 ASN VAL GLU LEU HIS ARG LEU ALA GLN GLY LEU ILE GLU SEQRES 33 B 439 TYR GLU THR LEU ASP ALA HIS GLU ILE GLU GLN VAL CYS SEQRES 34 B 439 LYS GLY GLU LYS LEU ALA LYS LEU LYS THR SEQRES 1 C 439 LYS PHE ASP ASP VAL CYS GLY CYS ASP GLU ALA ARG ALA SEQRES 2 C 439 GLU LEU GLU GLU ILE VAL ASP PHE LEU LYS ASP PRO THR SEQRES 3 C 439 LYS TYR GLU SER LEU GLY GLY LYS LEU PRO LYS GLY VAL SEQRES 4 C 439 LEU LEU THR GLY PRO PRO GLY THR GLY LYS THR LEU LEU SEQRES 5 C 439 ALA ARG ALA THR ALA GLY GLU ALA GLY VAL ASP PHE PHE SEQRES 6 C 439 PHE MET SER GLY SER GLU PHE ASP GLU VAL TYR VAL GLY SEQRES 7 C 439 VAL GLY ALA LYS ARG ILE ARG ASP LEU PHE ALA GLN ALA SEQRES 8 C 439 ARG SER ARG ALA PRO ALA ILE ILE PHE ILE ASP GLN LEU SEQRES 9 C 439 ASP ALA ILE GLY GLY LYS ARG ASN PRO LYS ASP GLN ALA SEQRES 10 C 439 TYR ALA LYS GLN THR LEU ASN GLN LEU LEU VAL GLU LEU SEQRES 11 C 439 ASP GLY PHE SER GLN THR SER GLY ILE ILE ILE ILE GLY SEQRES 12 C 439 ALA THR ASN PHE PRO GLU ALA LEU ASP LYS ALA LEU THR SEQRES 13 C 439 ARG PRO GLY ARG PHE ASP LYS VAL VAL ASN VAL ASP LEU SEQRES 14 C 439 PRO ASP VAL ARG GLY ARG ALA ASP ILE LEU LYS HIS HIS SEQRES 15 C 439 MET LYS LYS ILE THR LEU ALA ASP ASN VAL ASP PRO THR SEQRES 16 C 439 ILE ILE ALA ARG GLY THR PRO GLY LEU SER GLY ALA GLU SEQRES 17 C 439 LEU ALA ASN LEU VAL ASN GLN ALA ALA VAL TYR ALA CYS SEQRES 18 C 439 GLN LYS ASN ALA VAL SER VAL ASP MET SER HIS PHE GLU SEQRES 19 C 439 TRP ALA LYS ASP LYS ILE LEU MET GLY ALA GLU ARG LYS SEQRES 20 C 439 THR MET VAL LEU THR ASP ALA ALA ARG LYS ALA THR ALA SEQRES 21 C 439 PHE HIS GLU ALA GLY HIS ALA ILE MET ALA LYS TYR THR SEQRES 22 C 439 ASN GLY ALA THR PRO LEU TYR LYS ALA THR ILE LEU PRO SEQRES 23 C 439 ARG GLY ARG ALA LEU GLY ILE THR PHE GLN LEU PRO GLU SEQRES 24 C 439 MET ASP LYS VAL ASP ILE THR LYS ARG GLU CYS GLN ALA SEQRES 25 C 439 ARG LEU ASP VAL CYS MET GLY GLY LYS ILE ALA GLU GLU SEQRES 26 C 439 LEU ILE TYR GLY LYS ASP ASN THR THR SER GLY CYS GLY SEQRES 27 C 439 SER ASP LEU GLN SER ALA THR GLY THR ALA ARG ALA MET SEQRES 28 C 439 VAL THR GLN TYR GLY MET SER ASP ASP VAL GLY PRO VAL SEQRES 29 C 439 ASN LEU SER GLU GLU TRP GLU SER TRP SER ASN LYS ILE SEQRES 30 C 439 ARG ASP ILE ALA ASP ASN GLU VAL ILE GLU LEU LEU LYS SEQRES 31 C 439 ASP SER GLU GLU ARG ALA ARG ARG LEU LEU THR LYS LYS SEQRES 32 C 439 ASN VAL GLU LEU HIS ARG LEU ALA GLN GLY LEU ILE GLU SEQRES 33 C 439 TYR GLU THR LEU ASP ALA HIS GLU ILE GLU GLN VAL CYS SEQRES 34 C 439 LYS GLY GLU LYS LEU ALA LYS LEU LYS THR SEQRES 1 D 439 LYS PHE ASP ASP VAL CYS GLY CYS ASP GLU ALA ARG ALA SEQRES 2 D 439 GLU LEU GLU GLU ILE VAL ASP PHE LEU LYS ASP PRO THR SEQRES 3 D 439 LYS TYR GLU SER LEU GLY GLY LYS LEU PRO LYS GLY VAL SEQRES 4 D 439 LEU LEU THR GLY PRO PRO GLY THR GLY LYS THR LEU LEU SEQRES 5 D 439 ALA ARG ALA THR ALA GLY GLU ALA GLY VAL ASP PHE PHE SEQRES 6 D 439 PHE MET SER GLY SER GLU PHE ASP GLU VAL TYR VAL GLY SEQRES 7 D 439 VAL GLY ALA LYS ARG ILE ARG ASP LEU PHE ALA GLN ALA SEQRES 8 D 439 ARG SER ARG ALA PRO ALA ILE ILE PHE ILE ASP GLN LEU SEQRES 9 D 439 ASP ALA ILE GLY GLY LYS ARG ASN PRO LYS ASP GLN ALA SEQRES 10 D 439 TYR ALA LYS GLN THR LEU ASN GLN LEU LEU VAL GLU LEU SEQRES 11 D 439 ASP GLY PHE SER GLN THR SER GLY ILE ILE ILE ILE GLY SEQRES 12 D 439 ALA THR ASN PHE PRO GLU ALA LEU ASP LYS ALA LEU THR SEQRES 13 D 439 ARG PRO GLY ARG PHE ASP LYS VAL VAL ASN VAL ASP LEU SEQRES 14 D 439 PRO ASP VAL ARG GLY ARG ALA ASP ILE LEU LYS HIS HIS SEQRES 15 D 439 MET LYS LYS ILE THR LEU ALA ASP ASN VAL ASP PRO THR SEQRES 16 D 439 ILE ILE ALA ARG GLY THR PRO GLY LEU SER GLY ALA GLU SEQRES 17 D 439 LEU ALA ASN LEU VAL ASN GLN ALA ALA VAL TYR ALA CYS SEQRES 18 D 439 GLN LYS ASN ALA VAL SER VAL ASP MET SER HIS PHE GLU SEQRES 19 D 439 TRP ALA LYS ASP LYS ILE LEU MET GLY ALA GLU ARG LYS SEQRES 20 D 439 THR MET VAL LEU THR ASP ALA ALA ARG LYS ALA THR ALA SEQRES 21 D 439 PHE HIS GLU ALA GLY HIS ALA ILE MET ALA LYS TYR THR SEQRES 22 D 439 ASN GLY ALA THR PRO LEU TYR LYS ALA THR ILE LEU PRO SEQRES 23 D 439 ARG GLY ARG ALA LEU GLY ILE THR PHE GLN LEU PRO GLU SEQRES 24 D 439 MET ASP LYS VAL ASP ILE THR LYS ARG GLU CYS GLN ALA SEQRES 25 D 439 ARG LEU ASP VAL CYS MET GLY GLY LYS ILE ALA GLU GLU SEQRES 26 D 439 LEU ILE TYR GLY LYS ASP ASN THR THR SER GLY CYS GLY SEQRES 27 D 439 SER ASP LEU GLN SER ALA THR GLY THR ALA ARG ALA MET SEQRES 28 D 439 VAL THR GLN TYR GLY MET SER ASP ASP VAL GLY PRO VAL SEQRES 29 D 439 ASN LEU SER GLU GLU TRP GLU SER TRP SER ASN LYS ILE SEQRES 30 D 439 ARG ASP ILE ALA ASP ASN GLU VAL ILE GLU LEU LEU LYS SEQRES 31 D 439 ASP SER GLU GLU ARG ALA ARG ARG LEU LEU THR LYS LYS SEQRES 32 D 439 ASN VAL GLU LEU HIS ARG LEU ALA GLN GLY LEU ILE GLU SEQRES 33 D 439 TYR GLU THR LEU ASP ALA HIS GLU ILE GLU GLN VAL CYS SEQRES 34 D 439 LYS GLY GLU LYS LEU ALA LYS LEU LYS THR SEQRES 1 E 439 LYS PHE ASP ASP VAL CYS GLY CYS ASP GLU ALA ARG ALA SEQRES 2 E 439 GLU LEU GLU GLU ILE VAL ASP PHE LEU LYS ASP PRO THR SEQRES 3 E 439 LYS TYR GLU SER LEU GLY GLY LYS LEU PRO LYS GLY VAL SEQRES 4 E 439 LEU LEU THR GLY PRO PRO GLY THR GLY LYS THR LEU LEU SEQRES 5 E 439 ALA ARG ALA THR ALA GLY GLU ALA GLY VAL ASP PHE PHE SEQRES 6 E 439 PHE MET SER GLY SER GLU PHE ASP GLU VAL TYR VAL GLY SEQRES 7 E 439 VAL GLY ALA LYS ARG ILE ARG ASP LEU PHE ALA GLN ALA SEQRES 8 E 439 ARG SER ARG ALA PRO ALA ILE ILE PHE ILE ASP GLN LEU SEQRES 9 E 439 ASP ALA ILE GLY GLY LYS ARG ASN PRO LYS ASP GLN ALA SEQRES 10 E 439 TYR ALA LYS GLN THR LEU ASN GLN LEU LEU VAL GLU LEU SEQRES 11 E 439 ASP GLY PHE SER GLN THR SER GLY ILE ILE ILE ILE GLY SEQRES 12 E 439 ALA THR ASN PHE PRO GLU ALA LEU ASP LYS ALA LEU THR SEQRES 13 E 439 ARG PRO GLY ARG PHE ASP LYS VAL VAL ASN VAL ASP LEU SEQRES 14 E 439 PRO ASP VAL ARG GLY ARG ALA ASP ILE LEU LYS HIS HIS SEQRES 15 E 439 MET LYS LYS ILE THR LEU ALA ASP ASN VAL ASP PRO THR SEQRES 16 E 439 ILE ILE ALA ARG GLY THR PRO GLY LEU SER GLY ALA GLU SEQRES 17 E 439 LEU ALA ASN LEU VAL ASN GLN ALA ALA VAL TYR ALA CYS SEQRES 18 E 439 GLN LYS ASN ALA VAL SER VAL ASP MET SER HIS PHE GLU SEQRES 19 E 439 TRP ALA LYS ASP LYS ILE LEU MET GLY ALA GLU ARG LYS SEQRES 20 E 439 THR MET VAL LEU THR ASP ALA ALA ARG LYS ALA THR ALA SEQRES 21 E 439 PHE HIS GLU ALA GLY HIS ALA ILE MET ALA LYS TYR THR SEQRES 22 E 439 ASN GLY ALA THR PRO LEU TYR LYS ALA THR ILE LEU PRO SEQRES 23 E 439 ARG GLY ARG ALA LEU GLY ILE THR PHE GLN LEU PRO GLU SEQRES 24 E 439 MET ASP LYS VAL ASP ILE THR LYS ARG GLU CYS GLN ALA SEQRES 25 E 439 ARG LEU ASP VAL CYS MET GLY GLY LYS ILE ALA GLU GLU SEQRES 26 E 439 LEU ILE TYR GLY LYS ASP ASN THR THR SER GLY CYS GLY SEQRES 27 E 439 SER ASP LEU GLN SER ALA THR GLY THR ALA ARG ALA MET SEQRES 28 E 439 VAL THR GLN TYR GLY MET SER ASP ASP VAL GLY PRO VAL SEQRES 29 E 439 ASN LEU SER GLU GLU TRP GLU SER TRP SER ASN LYS ILE SEQRES 30 E 439 ARG ASP ILE ALA ASP ASN GLU VAL ILE GLU LEU LEU LYS SEQRES 31 E 439 ASP SER GLU GLU ARG ALA ARG ARG LEU LEU THR LYS LYS SEQRES 32 E 439 ASN VAL GLU LEU HIS ARG LEU ALA GLN GLY LEU ILE GLU SEQRES 33 E 439 TYR GLU THR LEU ASP ALA HIS GLU ILE GLU GLN VAL CYS SEQRES 34 E 439 LYS GLY GLU LYS LEU ALA LYS LEU LYS THR SEQRES 1 F 439 LYS PHE ASP ASP VAL CYS GLY CYS ASP GLU ALA ARG ALA SEQRES 2 F 439 GLU LEU GLU GLU ILE VAL ASP PHE LEU LYS ASP PRO THR SEQRES 3 F 439 LYS TYR GLU SER LEU GLY GLY LYS LEU PRO LYS GLY VAL SEQRES 4 F 439 LEU LEU THR GLY PRO PRO GLY THR GLY LYS THR LEU LEU SEQRES 5 F 439 ALA ARG ALA THR ALA GLY GLU ALA GLY VAL ASP PHE PHE SEQRES 6 F 439 PHE MET SER GLY SER GLU PHE ASP GLU VAL TYR VAL GLY SEQRES 7 F 439 VAL GLY ALA LYS ARG ILE ARG ASP LEU PHE ALA GLN ALA SEQRES 8 F 439 ARG SER ARG ALA PRO ALA ILE ILE PHE ILE ASP GLN LEU SEQRES 9 F 439 ASP ALA ILE GLY GLY LYS ARG ASN PRO LYS ASP GLN ALA SEQRES 10 F 439 TYR ALA LYS GLN THR LEU ASN GLN LEU LEU VAL GLU LEU SEQRES 11 F 439 ASP GLY PHE SER GLN THR SER GLY ILE ILE ILE ILE GLY SEQRES 12 F 439 ALA THR ASN PHE PRO GLU ALA LEU ASP LYS ALA LEU THR SEQRES 13 F 439 ARG PRO GLY ARG PHE ASP LYS VAL VAL ASN VAL ASP LEU SEQRES 14 F 439 PRO ASP VAL ARG GLY ARG ALA ASP ILE LEU LYS HIS HIS SEQRES 15 F 439 MET LYS LYS ILE THR LEU ALA ASP ASN VAL ASP PRO THR SEQRES 16 F 439 ILE ILE ALA ARG GLY THR PRO GLY LEU SER GLY ALA GLU SEQRES 17 F 439 LEU ALA ASN LEU VAL ASN GLN ALA ALA VAL TYR ALA CYS SEQRES 18 F 439 GLN LYS ASN ALA VAL SER VAL ASP MET SER HIS PHE GLU SEQRES 19 F 439 TRP ALA LYS ASP LYS ILE LEU MET GLY ALA GLU ARG LYS SEQRES 20 F 439 THR MET VAL LEU THR ASP ALA ALA ARG LYS ALA THR ALA SEQRES 21 F 439 PHE HIS GLU ALA GLY HIS ALA ILE MET ALA LYS TYR THR SEQRES 22 F 439 ASN GLY ALA THR PRO LEU TYR LYS ALA THR ILE LEU PRO SEQRES 23 F 439 ARG GLY ARG ALA LEU GLY ILE THR PHE GLN LEU PRO GLU SEQRES 24 F 439 MET ASP LYS VAL ASP ILE THR LYS ARG GLU CYS GLN ALA SEQRES 25 F 439 ARG LEU ASP VAL CYS MET GLY GLY LYS ILE ALA GLU GLU SEQRES 26 F 439 LEU ILE TYR GLY LYS ASP ASN THR THR SER GLY CYS GLY SEQRES 27 F 439 SER ASP LEU GLN SER ALA THR GLY THR ALA ARG ALA MET SEQRES 28 F 439 VAL THR GLN TYR GLY MET SER ASP ASP VAL GLY PRO VAL SEQRES 29 F 439 ASN LEU SER GLU GLU TRP GLU SER TRP SER ASN LYS ILE SEQRES 30 F 439 ARG ASP ILE ALA ASP ASN GLU VAL ILE GLU LEU LEU LYS SEQRES 31 F 439 ASP SER GLU GLU ARG ALA ARG ARG LEU LEU THR LYS LYS SEQRES 32 F 439 ASN VAL GLU LEU HIS ARG LEU ALA GLN GLY LEU ILE GLU SEQRES 33 F 439 TYR GLU THR LEU ASP ALA HIS GLU ILE GLU GLN VAL CYS SEQRES 34 F 439 LYS GLY GLU LYS LEU ALA LYS LEU LYS THR SEQRES 1 G 10 UNK UNK UNK UNK UNK UNK UNK UNK UNK UNK HET ATP A 801 43 HET ZN A 802 1 HET MG A 803 1 HET ATP B 801 43 HET ZN B 802 1 HET MG B 803 1 HET ATP C 801 43 HET ZN C 802 1 HET MG C 803 1 HET ZN D 801 1 HET MG D 802 1 HET ATP D 803 43 HET ADP E 801 39 HET ZN E 802 1 HET ZN F 801 1 HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM ZN ZINC ION HETNAM MG MAGNESIUM ION HETNAM ADP ADENOSINE-5'-DIPHOSPHATE FORMUL 8 ATP 4(C10 H16 N5 O13 P3) FORMUL 9 ZN 6(ZN 2+) FORMUL 10 MG 4(MG 2+) FORMUL 20 ADP C10 H15 N5 O10 P2 HELIX 1 AA1 CYS A 286 ASP A 302 1 17 HELIX 2 AA2 PRO A 303 GLU A 307 5 5 HELIX 3 AA3 GLY A 326 ALA A 338 1 13 HELIX 4 AA4 GLY A 356 ALA A 373 1 18 HELIX 5 AA5 LEU A 382 ILE A 385 5 4 HELIX 6 AA6 ALA A 397 GLY A 410 1 14 HELIX 7 AA7 PHE A 425 LEU A 429 5 5 HELIX 8 AA8 ASP A 430 ARG A 435 5 6 HELIX 9 AA9 ASP A 449 LYS A 462 1 14 HELIX 10 AB1 ASP A 471 THR A 479 1 9 HELIX 11 AB2 SER A 483 LYS A 501 1 19 HELIX 12 AB3 ASP A 507 MET A 520 1 14 HELIX 13 AB4 THR A 530 ALA A 548 1 19 HELIX 14 AB5 THR A 584 MET A 596 1 13 HELIX 15 AB6 MET A 596 GLY A 607 1 12 HELIX 16 AB7 LYS A 608 THR A 611 5 4 HELIX 17 AB8 CYS A 615 GLN A 632 1 18 HELIX 18 AB9 GLU A 647 TRP A 651 5 5 HELIX 19 AC1 LYS A 654 LYS A 681 1 28 HELIX 20 AC2 LYS A 681 TYR A 695 1 15 HELIX 21 AC3 ALA A 700 LYS A 708 1 9 HELIX 22 AC4 CYS B 286 ASP B 302 1 17 HELIX 23 AC5 PRO B 303 GLY B 310 5 8 HELIX 24 AC6 GLY B 326 GLU B 337 1 12 HELIX 25 AC7 GLY B 356 ALA B 373 1 18 HELIX 26 AC8 LEU B 382 ILE B 385 5 4 HELIX 27 AC9 LYS B 398 ASP B 409 1 12 HELIX 28 AD1 ASP B 449 MET B 461 1 13 HELIX 29 AD2 ASP B 471 GLY B 478 1 8 HELIX 30 AD3 SER B 483 LYS B 501 1 19 HELIX 31 AD4 ASP B 507 MET B 520 1 14 HELIX 32 AD5 THR B 530 ALA B 548 1 19 HELIX 33 AD6 THR B 584 CYS B 595 1 12 HELIX 34 AD7 MET B 596 GLY B 607 1 12 HELIX 35 AD8 LYS B 608 THR B 611 5 4 HELIX 36 AD9 THR B 612 GLY B 614 5 3 HELIX 37 AE1 CYS B 615 THR B 631 1 17 HELIX 38 AE2 GLU B 647 TRP B 651 5 5 HELIX 39 AE3 LYS B 654 LYS B 681 1 28 HELIX 40 AE4 LYS B 681 TYR B 695 1 15 HELIX 41 AE5 ALA B 700 LYS B 708 1 9 HELIX 42 AE6 LYS C 279 VAL C 283 5 5 HELIX 43 AE7 CYS C 286 ASP C 302 1 17 HELIX 44 AE8 PRO C 303 TYR C 306 5 4 HELIX 45 AE9 GLY C 326 ALA C 338 1 13 HELIX 46 AF1 GLY C 356 ALA C 373 1 18 HELIX 47 AF2 LYS C 398 LEU C 408 1 11 HELIX 48 AF3 PHE C 425 LEU C 429 5 5 HELIX 49 AF4 ASP C 449 MET C 461 1 13 HELIX 50 AF5 LYS C 462 ILE C 464 5 3 HELIX 51 AF6 ASP C 471 THR C 479 1 9 HELIX 52 AF7 SER C 483 LYS C 501 1 19 HELIX 53 AF8 ASP C 507 GLY C 521 1 15 HELIX 54 AF9 THR C 530 TYR C 550 1 21 HELIX 55 AG1 THR C 584 GLY C 607 1 24 HELIX 56 AG2 LYS C 608 THR C 611 5 4 HELIX 57 AG3 GLY C 614 THR C 631 1 18 HELIX 58 AG4 ASN C 653 LYS C 681 1 29 HELIX 59 AG5 LYS C 681 GLU C 694 1 14 HELIX 60 AG6 ASP C 699 CYS C 707 1 9 HELIX 61 AG7 LYS D 279 VAL D 283 5 5 HELIX 62 AG8 CYS D 286 ASP D 302 1 17 HELIX 63 AG9 PRO D 303 TYR D 306 5 4 HELIX 64 AH1 GLY D 326 ALA D 338 1 13 HELIX 65 AH2 GLY D 356 SER D 371 1 16 HELIX 66 AH3 GLN D 381 GLY D 386 5 6 HELIX 67 AH4 ALA D 395 ALA D 397 5 3 HELIX 68 AH5 LYS D 398 ASP D 409 1 12 HELIX 69 AH6 ASP D 449 MET D 461 1 13 HELIX 70 AH7 ASP D 471 GLY D 478 1 8 HELIX 71 AH8 SER D 483 LYS D 501 1 19 HELIX 72 AH9 ASP D 507 MET D 520 1 14 HELIX 73 AI1 THR D 530 TYR D 550 1 21 HELIX 74 AI2 THR D 584 CYS D 595 1 12 HELIX 75 AI3 MET D 596 TYR D 606 1 11 HELIX 76 AI4 GLY D 607 THR D 611 5 5 HELIX 77 AI5 GLY D 614 THR D 631 1 18 HELIX 78 AI6 SER D 652 THR D 679 1 28 HELIX 79 AI7 LYS D 681 TYR D 695 1 15 HELIX 80 AI8 ASP D 699 GLY D 709 1 11 HELIX 81 AI9 LYS E 279 VAL E 283 5 5 HELIX 82 AJ1 CYS E 286 ASP E 302 1 17 HELIX 83 AJ2 ASP E 302 GLU E 307 1 6 HELIX 84 AJ3 LYS E 327 GLY E 339 1 13 HELIX 85 AJ4 SER E 348 PHE E 350 5 3 HELIX 86 AJ5 GLY E 358 ARG E 370 1 13 HELIX 87 AJ6 SER E 371 ALA E 373 5 3 HELIX 88 AJ7 LEU E 382 ILE E 385 5 4 HELIX 89 AJ8 LYS E 398 GLY E 410 1 13 HELIX 90 AJ9 ASP E 449 ILE E 464 1 16 HELIX 91 AK1 ASP E 471 THR E 479 1 9 HELIX 92 AK2 SER E 483 LYS E 501 1 19 HELIX 93 AK3 ASP E 507 GLY E 521 1 15 HELIX 94 AK4 THR E 530 THR E 551 1 22 HELIX 95 AK5 THR E 584 CYS E 595 1 12 HELIX 96 AK6 MET E 596 GLY E 607 1 12 HELIX 97 AK7 LYS E 608 THR E 611 5 4 HELIX 98 AK8 CYS E 615 THR E 631 1 17 HELIX 99 AK9 SER E 652 THR E 679 1 28 HELIX 100 AL1 LYS E 681 GLU E 696 1 16 HELIX 101 AL2 ALA E 700 CYS E 707 1 8 HELIX 102 AL3 CYS F 286 LYS F 301 1 16 HELIX 103 AL4 ASP F 302 LEU F 309 1 8 HELIX 104 AL5 LYS F 327 ALA F 338 1 12 HELIX 105 AL6 SER F 348 GLU F 352 5 5 HELIX 106 AL7 VAL F 357 ARG F 372 1 16 HELIX 107 AL8 ASN F 390 LEU F 408 1 19 HELIX 108 AL9 LYS F 431 ARG F 435 5 5 HELIX 109 AM1 ASP F 449 LYS F 462 1 14 HELIX 110 AM2 PRO F 472 ARG F 477 1 6 HELIX 111 AM3 GLY F 484 LYS F 501 1 18 HELIX 112 AM4 ASP F 507 LEU F 519 1 13 HELIX 113 AM5 THR F 530 TYR F 550 1 21 HELIX 114 AM6 THR F 584 CYS F 595 1 12 HELIX 115 AM7 MET F 596 GLY F 607 1 12 HELIX 116 AM8 GLY F 614 GLN F 632 1 19 HELIX 117 AM9 SER F 652 LYS F 680 1 29 HELIX 118 AN1 LYS F 681 GLU F 696 1 16 HELIX 119 AN2 ASP F 699 LYS F 708 1 10 SHEET 1 AA1 5 PHE A 342 SER A 346 0 SHEET 2 AA1 5 ILE A 376 ASP A 380 1 O ILE A 376 N PHE A 343 SHEET 3 AA1 5 ILE A 418 ALA A 422 1 O ILE A 420 N ILE A 377 SHEET 4 AA1 5 GLY A 316 THR A 320 1 N VAL A 317 O GLY A 421 SHEET 5 AA1 5 PHE A 439 ASN A 444 1 O LYS A 441 N LEU A 318 SHEET 1 AA2 3 ILE A 571 GLN A 574 0 SHEET 2 AA2 3 LEU A 557 THR A 561 -1 N LYS A 559 O PHE A 573 SHEET 3 AA2 3 THR A 697 ASP A 699 -1 O LEU A 698 N ALA A 560 SHEET 1 AA3 5 PHE B 342 SER B 346 0 SHEET 2 AA3 5 ALA B 375 ASP B 380 1 O ASP B 380 N MET B 345 SHEET 3 AA3 5 ILE B 417 THR B 423 1 O ILE B 420 N ILE B 377 SHEET 4 AA3 5 VAL B 317 THR B 320 1 N LEU B 319 O GLY B 421 SHEET 5 AA3 5 VAL B 442 ASN B 444 1 O VAL B 443 N LEU B 318 SHEET 1 AA4 3 ILE B 571 GLN B 574 0 SHEET 2 AA4 3 LEU B 557 THR B 561 -1 N TYR B 558 O PHE B 573 SHEET 3 AA4 3 THR B 697 ASP B 699 -1 O LEU B 698 N ALA B 560 SHEET 1 AA5 5 PHE C 342 SER C 346 0 SHEET 2 AA5 5 ALA C 375 ASP C 380 1 O PHE C 378 N MET C 345 SHEET 3 AA5 5 ILE C 417 THR C 423 1 O ILE C 420 N ILE C 377 SHEET 4 AA5 5 GLY C 316 THR C 320 1 N LEU C 319 O GLY C 421 SHEET 5 AA5 5 LYS C 441 ASN C 444 1 O LYS C 441 N LEU C 318 SHEET 1 AA6 2 LEU C 557 THR C 561 0 SHEET 2 AA6 2 ILE C 571 GLN C 574 -1 O ILE C 571 N THR C 561 SHEET 1 AA7 5 PHE D 342 SER D 346 0 SHEET 2 AA7 5 ILE D 376 ASP D 380 1 O ILE D 376 N PHE D 343 SHEET 3 AA7 5 ILE D 418 THR D 423 1 O ILE D 420 N ILE D 377 SHEET 4 AA7 5 GLY D 316 THR D 320 1 N LEU D 319 O GLY D 421 SHEET 5 AA7 5 LYS D 441 ASN D 444 1 O LYS D 441 N GLY D 316 SHEET 1 AA8 2 LEU D 557 ALA D 560 0 SHEET 2 AA8 2 THR D 572 GLN D 574 -1 O PHE D 573 N LYS D 559 SHEET 1 AA9 5 PHE E 342 SER E 346 0 SHEET 2 AA9 5 ILE E 376 ASP E 380 1 O PHE E 378 N PHE E 343 SHEET 3 AA9 5 ILE E 418 THR E 423 1 O ILE E 418 N ILE E 377 SHEET 4 AA9 5 GLY E 316 THR E 320 1 N LEU E 319 O THR E 423 SHEET 5 AA9 5 LYS E 441 ASN E 444 1 O LYS E 441 N LEU E 318 SHEET 1 AB1 3 PHE E 573 GLN E 574 0 SHEET 2 AB1 3 LEU E 557 THR E 561 -1 N TYR E 558 O PHE E 573 SHEET 3 AB1 3 THR E 697 ASP E 699 -1 O LEU E 698 N ALA E 560 SHEET 1 AB2 5 ASP F 341 SER F 346 0 SHEET 2 AB2 5 ALA F 375 ASP F 380 1 O ILE F 376 N PHE F 343 SHEET 3 AB2 5 ILE F 418 ALA F 422 1 O ALA F 422 N ILE F 379 SHEET 4 AB2 5 GLY F 316 THR F 320 1 N VAL F 317 O GLY F 421 SHEET 5 AB2 5 VAL F 442 ASN F 444 1 O VAL F 443 N LEU F 318 SHEET 1 AB3 3 THR F 572 GLN F 574 0 SHEET 2 AB3 3 LEU F 557 THR F 561 -1 N TYR F 558 O PHE F 573 SHEET 3 AB3 3 THR F 697 LEU F 698 -1 O LEU F 698 N ALA F 560 LINK NE2 HIS A 540 ZN ZN A 802 1555 1555 2.24 LINK NE2 HIS A 544 ZN ZN A 802 1555 1555 2.19 LINK OD1 ASP A 618 ZN ZN A 802 1555 1555 2.64 LINK OD2 ASP A 618 ZN ZN A 802 1555 1555 2.13 LINK O2G ATP A 801 MG MG A 803 1555 1555 1.99 LINK O3G ATP A 801 MG MG A 803 1555 1555 2.18 LINK O2B ATP A 801 MG MG A 803 1555 1555 1.99 LINK O2A ATP A 801 MG MG A 803 1555 1555 2.97 LINK OD2 ASP B 380 MG MG B 803 1555 1555 2.91 LINK NE2 HIS B 540 ZN ZN B 802 1555 1555 2.20 LINK NE2 HIS B 544 ZN ZN B 802 1555 1555 2.14 LINK OD1 ASP B 618 ZN ZN B 802 1555 1555 2.52 LINK OD2 ASP B 618 ZN ZN B 802 1555 1555 2.02 LINK O2B ATP B 801 MG MG B 803 1555 1555 1.97 LINK OG1 THR C 328 MG MG C 803 1555 1555 2.03 LINK NE2 HIS C 540 ZN ZN C 802 1555 1555 2.15 LINK NE2 HIS C 544 ZN ZN C 802 1555 1555 2.16 LINK OD1 ASP C 618 ZN ZN C 802 1555 1555 2.39 LINK OD2 ASP C 618 ZN ZN C 802 1555 1555 2.00 LINK O2B ATP C 801 MG MG C 803 1555 1555 2.18 LINK OG1 THR D 328 MG MG D 802 1555 1555 2.02 LINK NE2 HIS D 540 ZN ZN D 801 1555 1555 2.15 LINK NE2 HIS D 544 ZN ZN D 801 1555 1555 2.13 LINK OD2 ASP D 618 ZN ZN D 801 1555 1555 2.01 LINK MG MG D 802 O2B ATP D 803 1555 1555 2.11 LINK NE2 HIS E 540 ZN ZN E 802 1555 1555 2.15 LINK NE2 HIS E 544 ZN ZN E 802 1555 1555 2.18 LINK OD1 ASP E 618 ZN ZN E 802 1555 1555 2.40 LINK OD2 ASP E 618 ZN ZN E 802 1555 1555 2.05 LINK NE2 HIS F 540 ZN ZN F 801 1555 1555 2.09 LINK NE2 HIS F 544 ZN ZN F 801 1555 1555 2.60 CISPEP 1 LYS E 392 ASP E 393 2 7.15 CISPEP 2 ASP E 393 GLN E 394 2 -11.08 CISPEP 3 GLN E 394 ALA E 395 2 -8.33 CISPEP 4 ALA E 395 TYR E 396 2 -1.69 CISPEP 5 THR E 465 LEU E 466 2 -5.56 CISPEP 6 ALA F 373 PRO F 374 2 -5.34 CISPEP 7 GLU F 577 MET F 578 2 -3.43 CISPEP 8 GLY F 570 ILE F 571 4 5.40 SITE 1 AC1 13 CYS A 284 GLY A 324 THR A 325 GLY A 326 SITE 2 AC1 13 LYS A 327 THR A 328 LEU A 329 HIS A 460 SITE 3 AC1 13 GLY A 484 ALA A 485 MG A 803 ARG B 435 SITE 4 AC1 13 ARG B 438 SITE 1 AC2 3 HIS A 540 HIS A 544 ASP A 618 SITE 1 AC3 2 THR A 328 ATP A 801 SITE 1 AC4 15 ASP B 282 CYS B 284 PRO B 323 GLY B 324 SITE 2 AC4 15 THR B 325 GLY B 326 LYS B 327 THR B 328 SITE 3 AC4 15 LEU B 329 HIS B 460 GLY B 484 ALA B 485 SITE 4 AC4 15 MG B 803 ARG C 435 ARG C 438 SITE 1 AC5 3 HIS B 540 HIS B 544 ASP B 618 SITE 1 AC6 3 THR B 328 ASP B 380 ATP B 801 SITE 1 AC7 14 ASP C 282 CYS C 284 PRO C 323 GLY C 324 SITE 2 AC7 14 THR C 325 GLY C 326 LYS C 327 THR C 328 SITE 3 AC7 14 LEU C 329 ASN C 424 HIS C 460 MG C 803 SITE 4 AC7 14 ASP D 409 ARG D 438 SITE 1 AC8 3 HIS C 540 HIS C 544 ASP C 618 SITE 1 AC9 3 THR C 328 ASP C 380 ATP C 801 SITE 1 AD1 3 HIS D 540 HIS D 544 ASP D 618 SITE 1 AD2 3 THR D 328 ASP D 380 ATP D 803 SITE 1 AD3 14 ASP D 282 CYS D 284 PRO D 323 GLY D 324 SITE 2 AD3 14 THR D 325 GLY D 326 LYS D 327 THR D 328 SITE 3 AD3 14 LEU D 329 ASN D 424 HIS D 460 MG D 802 SITE 4 AD3 14 ASP E 409 ARG E 438 SITE 1 AD4 12 ASP E 282 VAL E 283 CYS E 284 GLY E 324 SITE 2 AD4 12 THR E 325 GLY E 326 LYS E 327 THR E 328 SITE 3 AD4 12 LEU E 329 HIS E 460 GLY E 484 ALA E 485 SITE 1 AD5 3 HIS E 540 HIS E 544 ASP E 618 SITE 1 AD6 3 HIS F 540 HIS F 544 ASP F 618 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1