data_6AZ5 # _entry.id 6AZ5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6AZ5 pdb_00006az5 10.2210/pdb6az5/pdb WWPDB D_1000230022 ? ? # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6AZ5 _pdbx_database_status.recvd_initial_deposition_date 2017-09-10 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Cockburn, D.W.' 1 0000-0001-6791-6599 'Wawrzak, Z.' 2 ? 'Suh, C.' 3 ? 'Koropatkin, N.M.' 4 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Mol. Microbiol.' _citation.journal_id_ASTM MOMIEE _citation.journal_id_CSD 2007 _citation.journal_id_ISSN 1365-2958 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 107 _citation.language ? _citation.page_first 249 _citation.page_last 264 _citation.title ;Novel carbohydrate binding modules in the surface anchored alpha-amylase of Eubacterium rectale provide a molecular rationale for the range of starches used by this organism in the human gut. ; _citation.year 2018 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1111/mmi.13881 _citation.pdbx_database_id_PubMed 29139580 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cockburn, D.W.' 1 ? primary 'Suh, C.' 2 ? primary 'Medina, K.P.' 3 ? primary 'Duvall, R.M.' 4 ? primary 'Wawrzak, Z.' 5 ? primary 'Henrissat, B.' 6 ? primary 'Koropatkin, N.M.' 7 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 90.00 _cell.angle_beta_esd ? _cell.angle_gamma 120.00 _cell.angle_gamma_esd ? _cell.entry_id 6AZ5 _cell.details ? _cell.formula_units_Z ? _cell.length_a 51.000 _cell.length_a_esd ? _cell.length_b 51.000 _cell.length_b_esd ? _cell.length_c 151.830 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6AZ5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man alpha-amylase 13025.083 1 ? ? ? ? 2 water nat water 18.015 48 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;PDHTFTIYYYNEDLSTDTDMGKVDLWMWNAGLDGSYVFDGTYYDAENKVTWFKQTITVAGSNVGKTVGLKARYDNTKGWD GGSDTADRSFTISGDENEVLYYVDGSDPVHEKPVIV ; _entity_poly.pdbx_seq_one_letter_code_can ;PDHTFTIYYYNEDLSTDTDMGKVDLWMWNAGLDGSYVFDGTYYDAENKVTWFKQTITVAGSNVGKTVGLKARYDNTKGWD GGSDTADRSFTISGDENEVLYYVDGSDPVHEKPVIV ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 PRO n 1 2 ASP n 1 3 HIS n 1 4 THR n 1 5 PHE n 1 6 THR n 1 7 ILE n 1 8 TYR n 1 9 TYR n 1 10 TYR n 1 11 ASN n 1 12 GLU n 1 13 ASP n 1 14 LEU n 1 15 SER n 1 16 THR n 1 17 ASP n 1 18 THR n 1 19 ASP n 1 20 MET n 1 21 GLY n 1 22 LYS n 1 23 VAL n 1 24 ASP n 1 25 LEU n 1 26 TRP n 1 27 MET n 1 28 TRP n 1 29 ASN n 1 30 ALA n 1 31 GLY n 1 32 LEU n 1 33 ASP n 1 34 GLY n 1 35 SER n 1 36 TYR n 1 37 VAL n 1 38 PHE n 1 39 ASP n 1 40 GLY n 1 41 THR n 1 42 TYR n 1 43 TYR n 1 44 ASP n 1 45 ALA n 1 46 GLU n 1 47 ASN n 1 48 LYS n 1 49 VAL n 1 50 THR n 1 51 TRP n 1 52 PHE n 1 53 LYS n 1 54 GLN n 1 55 THR n 1 56 ILE n 1 57 THR n 1 58 VAL n 1 59 ALA n 1 60 GLY n 1 61 SER n 1 62 ASN n 1 63 VAL n 1 64 GLY n 1 65 LYS n 1 66 THR n 1 67 VAL n 1 68 GLY n 1 69 LEU n 1 70 LYS n 1 71 ALA n 1 72 ARG n 1 73 TYR n 1 74 ASP n 1 75 ASN n 1 76 THR n 1 77 LYS n 1 78 GLY n 1 79 TRP n 1 80 ASP n 1 81 GLY n 1 82 GLY n 1 83 SER n 1 84 ASP n 1 85 THR n 1 86 ALA n 1 87 ASP n 1 88 ARG n 1 89 SER n 1 90 PHE n 1 91 THR n 1 92 ILE n 1 93 SER n 1 94 GLY n 1 95 ASP n 1 96 GLU n 1 97 ASN n 1 98 GLU n 1 99 VAL n 1 100 LEU n 1 101 TYR n 1 102 TYR n 1 103 VAL n 1 104 ASP n 1 105 GLY n 1 106 SER n 1 107 ASP n 1 108 PRO n 1 109 VAL n 1 110 HIS n 1 111 GLU n 1 112 LYS n 1 113 PRO n 1 114 VAL n 1 115 ILE n 1 116 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 116 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene EUR_21100 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Eubacterium rectale DSM 17629' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 657318 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code D6DYI9_9FIRM _struct_ref.pdbx_db_accession D6DYI9 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;PDHTFTIYYYNEDLSTDTDMGKVDLWMWNAGLDGSYVFDGTYYDAENKVTWFKQTITVAGSNVGKTVGLKARYDNTKGWD GGSDTADRSFTISGDENEVLYYVDGSDPVHEKPVIV ; _struct_ref.pdbx_align_begin 391 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6AZ5 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 116 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession D6DYI9 _struct_ref_seq.db_align_beg 391 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 506 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 391 _struct_ref_seq.pdbx_auth_seq_align_end 506 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6AZ5 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.19 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 43.79 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '50% pentaerythritol propoxylate (5/4 PO/OH), 0.1 M Tris-HCl pH 8.0' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 80 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2016-12-08 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 21-ID-F' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.979 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 21-ID-F _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6AZ5 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 2.2 _reflns.d_resolution_low 33.28 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 6492 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.94 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 16.9 _reflns.pdbx_Rmerge_I_obs 0.07451 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 15.08 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all 0.01875 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 2.2 _reflns_shell.d_res_low 2.279 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 9.98 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs 608 _reflns_shell.percent_possible_all 100 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.1759 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 17.6 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all 0.04297 _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half 0.996 _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6AZ5 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 2.200 _refine.ls_d_res_low 33.28 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 6492 _refine.ls_number_reflns_R_free 650 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.98 _refine.ls_percent_reflns_R_free 10.01 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2339 _refine.ls_R_factor_R_free 0.2555 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2315 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details ? _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.40 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 26.02 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.29 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 920 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 48 _refine_hist.number_atoms_total 968 _refine_hist.d_res_high 2.200 _refine_hist.d_res_low 33.28 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.004 ? 945 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 0.838 ? 1288 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 11.777 ? 323 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.035 ? 136 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.003 ? 165 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 2.2001 2.3700 . . 123 1111 100.00 . . . 0.3438 . 0.2970 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.3700 2.6084 . . 127 1134 100.00 . . . 0.3354 . 0.2973 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.6084 2.9857 . . 127 1154 100.00 . . . 0.2992 . 0.2714 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.9857 3.7612 . . 130 1166 100.00 . . . 0.2530 . 0.2070 . . . . . . . . . . 'X-RAY DIFFRACTION' 3.7612 38.1820 . . 143 1278 100.00 . . . 0.1961 . 0.1959 . . . . . . . . . . # _struct.entry_id 6AZ5 _struct.title 'Crystal structure of CBMd (family CBM41) from Eubacterium rectale Amy13K' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6AZ5 _struct_keywords.text 'Carbohydrate Binding Module, Amylase, Starch, Gut Microbiome, Eubacterium rectale, SUGAR BINDING PROTEIN' _struct_keywords.pdbx_keywords 'SUGAR BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ALA A 59 ? VAL A 63 ? ALA A 449 VAL A 453 5 ? 5 HELX_P HELX_P2 AA2 ASP A 74 ? GLY A 82 ? ASP A 464 GLY A 472 5 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLY A 40 ? ASP A 44 ? GLY A 430 ASP A 434 AA1 2 VAL A 49 ? VAL A 58 ? VAL A 439 VAL A 448 AA1 3 HIS A 3 ? TYR A 10 ? HIS A 393 TYR A 400 AA1 4 VAL A 99 ? VAL A 103 ? VAL A 489 VAL A 493 AA2 1 LEU A 32 ? VAL A 37 ? LEU A 422 VAL A 427 AA2 2 ASP A 24 ? ASN A 29 ? ASP A 414 ASN A 419 AA2 3 THR A 66 ? ARG A 72 ? THR A 456 ARG A 462 AA2 4 ARG A 88 ? THR A 91 ? ARG A 478 THR A 481 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N ASP A 44 ? N ASP A 434 O VAL A 49 ? O VAL A 439 AA1 2 3 O VAL A 58 ? O VAL A 448 N HIS A 3 ? N HIS A 393 AA1 3 4 N TYR A 8 ? N TYR A 398 O LEU A 100 ? O LEU A 490 AA2 1 2 O GLY A 34 ? O GLY A 424 N MET A 27 ? N MET A 417 AA2 2 3 N TRP A 26 ? N TRP A 416 O LYS A 70 ? O LYS A 460 AA2 3 4 N VAL A 67 ? N VAL A 457 O PHE A 90 ? O PHE A 480 # _atom_sites.entry_id 6AZ5 _atom_sites.fract_transf_matrix[1][1] 0.019608 _atom_sites.fract_transf_matrix[1][2] 0.011321 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.022641 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006586 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 PRO 1 391 391 PRO PRO A . n A 1 2 ASP 2 392 392 ASP ASP A . n A 1 3 HIS 3 393 393 HIS HIS A . n A 1 4 THR 4 394 394 THR THR A . n A 1 5 PHE 5 395 395 PHE PHE A . n A 1 6 THR 6 396 396 THR THR A . n A 1 7 ILE 7 397 397 ILE ILE A . n A 1 8 TYR 8 398 398 TYR TYR A . n A 1 9 TYR 9 399 399 TYR TYR A . n A 1 10 TYR 10 400 400 TYR TYR A . n A 1 11 ASN 11 401 401 ASN ASN A . n A 1 12 GLU 12 402 402 GLU GLU A . n A 1 13 ASP 13 403 403 ASP ASP A . n A 1 14 LEU 14 404 404 LEU LEU A . n A 1 15 SER 15 405 405 SER SER A . n A 1 16 THR 16 406 406 THR THR A . n A 1 17 ASP 17 407 407 ASP ASP A . n A 1 18 THR 18 408 408 THR THR A . n A 1 19 ASP 19 409 409 ASP ASP A . n A 1 20 MET 20 410 410 MET MET A . n A 1 21 GLY 21 411 411 GLY GLY A . n A 1 22 LYS 22 412 412 LYS LYS A . n A 1 23 VAL 23 413 413 VAL VAL A . n A 1 24 ASP 24 414 414 ASP ASP A . n A 1 25 LEU 25 415 415 LEU LEU A . n A 1 26 TRP 26 416 416 TRP TRP A . n A 1 27 MET 27 417 417 MET MET A . n A 1 28 TRP 28 418 418 TRP TRP A . n A 1 29 ASN 29 419 419 ASN ASN A . n A 1 30 ALA 30 420 420 ALA ALA A . n A 1 31 GLY 31 421 421 GLY GLY A . n A 1 32 LEU 32 422 422 LEU LEU A . n A 1 33 ASP 33 423 423 ASP ASP A . n A 1 34 GLY 34 424 424 GLY GLY A . n A 1 35 SER 35 425 425 SER SER A . n A 1 36 TYR 36 426 426 TYR TYR A . n A 1 37 VAL 37 427 427 VAL VAL A . n A 1 38 PHE 38 428 428 PHE PHE A . n A 1 39 ASP 39 429 429 ASP ASP A . n A 1 40 GLY 40 430 430 GLY GLY A . n A 1 41 THR 41 431 431 THR THR A . n A 1 42 TYR 42 432 432 TYR TYR A . n A 1 43 TYR 43 433 433 TYR TYR A . n A 1 44 ASP 44 434 434 ASP ASP A . n A 1 45 ALA 45 435 435 ALA ALA A . n A 1 46 GLU 46 436 436 GLU GLU A . n A 1 47 ASN 47 437 437 ASN ASN A . n A 1 48 LYS 48 438 438 LYS LYS A . n A 1 49 VAL 49 439 439 VAL VAL A . n A 1 50 THR 50 440 440 THR THR A . n A 1 51 TRP 51 441 441 TRP TRP A . n A 1 52 PHE 52 442 442 PHE PHE A . n A 1 53 LYS 53 443 443 LYS LYS A . n A 1 54 GLN 54 444 444 GLN GLN A . n A 1 55 THR 55 445 445 THR THR A . n A 1 56 ILE 56 446 446 ILE ILE A . n A 1 57 THR 57 447 447 THR THR A . n A 1 58 VAL 58 448 448 VAL VAL A . n A 1 59 ALA 59 449 449 ALA ALA A . n A 1 60 GLY 60 450 450 GLY GLY A . n A 1 61 SER 61 451 451 SER SER A . n A 1 62 ASN 62 452 452 ASN ASN A . n A 1 63 VAL 63 453 453 VAL VAL A . n A 1 64 GLY 64 454 454 GLY GLY A . n A 1 65 LYS 65 455 455 LYS LYS A . n A 1 66 THR 66 456 456 THR THR A . n A 1 67 VAL 67 457 457 VAL VAL A . n A 1 68 GLY 68 458 458 GLY GLY A . n A 1 69 LEU 69 459 459 LEU LEU A . n A 1 70 LYS 70 460 460 LYS LYS A . n A 1 71 ALA 71 461 461 ALA ALA A . n A 1 72 ARG 72 462 462 ARG ARG A . n A 1 73 TYR 73 463 463 TYR TYR A . n A 1 74 ASP 74 464 464 ASP ASP A . n A 1 75 ASN 75 465 465 ASN ASN A . n A 1 76 THR 76 466 466 THR THR A . n A 1 77 LYS 77 467 467 LYS LYS A . n A 1 78 GLY 78 468 468 GLY GLY A . n A 1 79 TRP 79 469 469 TRP TRP A . n A 1 80 ASP 80 470 470 ASP ASP A . n A 1 81 GLY 81 471 471 GLY GLY A . n A 1 82 GLY 82 472 472 GLY GLY A . n A 1 83 SER 83 473 473 SER SER A . n A 1 84 ASP 84 474 474 ASP ASP A . n A 1 85 THR 85 475 475 THR THR A . n A 1 86 ALA 86 476 476 ALA ALA A . n A 1 87 ASP 87 477 477 ASP ASP A . n A 1 88 ARG 88 478 478 ARG ARG A . n A 1 89 SER 89 479 479 SER SER A . n A 1 90 PHE 90 480 480 PHE PHE A . n A 1 91 THR 91 481 481 THR THR A . n A 1 92 ILE 92 482 482 ILE ILE A . n A 1 93 SER 93 483 483 SER SER A . n A 1 94 GLY 94 484 484 GLY GLY A . n A 1 95 ASP 95 485 485 ASP ASP A . n A 1 96 GLU 96 486 486 GLU GLU A . n A 1 97 ASN 97 487 487 ASN ASN A . n A 1 98 GLU 98 488 488 GLU GLU A . n A 1 99 VAL 99 489 489 VAL VAL A . n A 1 100 LEU 100 490 490 LEU LEU A . n A 1 101 TYR 101 491 491 TYR TYR A . n A 1 102 TYR 102 492 492 TYR TYR A . n A 1 103 VAL 103 493 493 VAL VAL A . n A 1 104 ASP 104 494 494 ASP ASP A . n A 1 105 GLY 105 495 495 GLY GLY A . n A 1 106 SER 106 496 496 SER SER A . n A 1 107 ASP 107 497 497 ASP ASP A . n A 1 108 PRO 108 498 498 PRO PRO A . n A 1 109 VAL 109 499 499 VAL VAL A . n A 1 110 HIS 110 500 500 HIS HIS A . n A 1 111 GLU 111 501 501 GLU GLU A . n A 1 112 LYS 112 502 502 LYS LYS A . n A 1 113 PRO 113 503 503 PRO PRO A . n A 1 114 VAL 114 504 504 VAL VAL A . n A 1 115 ILE 115 505 505 ILE ILE A . n A 1 116 VAL 116 506 506 VAL VAL A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 601 39 HOH HOH A . B 2 HOH 2 602 30 HOH HOH A . B 2 HOH 3 603 1 HOH HOH A . B 2 HOH 4 604 14 HOH HOH A . B 2 HOH 5 605 31 HOH HOH A . B 2 HOH 6 606 21 HOH HOH A . B 2 HOH 7 607 13 HOH HOH A . B 2 HOH 8 608 29 HOH HOH A . B 2 HOH 9 609 6 HOH HOH A . B 2 HOH 10 610 10 HOH HOH A . B 2 HOH 11 611 7 HOH HOH A . B 2 HOH 12 612 41 HOH HOH A . B 2 HOH 13 613 23 HOH HOH A . B 2 HOH 14 614 4 HOH HOH A . B 2 HOH 15 615 20 HOH HOH A . B 2 HOH 16 616 2 HOH HOH A . B 2 HOH 17 617 18 HOH HOH A . B 2 HOH 18 618 24 HOH HOH A . B 2 HOH 19 619 3 HOH HOH A . B 2 HOH 20 620 16 HOH HOH A . B 2 HOH 21 621 17 HOH HOH A . B 2 HOH 22 622 49 HOH HOH A . B 2 HOH 23 623 43 HOH HOH A . B 2 HOH 24 624 25 HOH HOH A . B 2 HOH 25 625 36 HOH HOH A . B 2 HOH 26 626 15 HOH HOH A . B 2 HOH 27 627 5 HOH HOH A . B 2 HOH 28 628 22 HOH HOH A . B 2 HOH 29 629 28 HOH HOH A . B 2 HOH 30 630 9 HOH HOH A . B 2 HOH 31 631 32 HOH HOH A . B 2 HOH 32 632 8 HOH HOH A . B 2 HOH 33 633 26 HOH HOH A . B 2 HOH 34 634 45 HOH HOH A . B 2 HOH 35 635 19 HOH HOH A . B 2 HOH 36 636 11 HOH HOH A . B 2 HOH 37 637 12 HOH HOH A . B 2 HOH 38 638 27 HOH HOH A . B 2 HOH 39 639 48 HOH HOH A . B 2 HOH 40 640 38 HOH HOH A . B 2 HOH 41 641 44 HOH HOH A . B 2 HOH 42 642 47 HOH HOH A . B 2 HOH 43 643 37 HOH HOH A . B 2 HOH 44 644 35 HOH HOH A . B 2 HOH 45 645 42 HOH HOH A . B 2 HOH 46 646 33 HOH HOH A . B 2 HOH 47 647 34 HOH HOH A . B 2 HOH 48 648 40 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 6120 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 642 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id B _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-11-29 2 'Structure model' 1 1 2018-01-17 3 'Structure model' 1 2 2022-03-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Author supporting evidence' 3 3 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 3 'Structure model' database_2 3 3 'Structure model' pdbx_audit_support # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.journal_volume' 2 2 'Structure model' '_citation.page_first' 3 2 'Structure model' '_citation.page_last' 4 2 'Structure model' '_citation.year' 5 3 'Structure model' '_database_2.pdbx_DOI' 6 3 'Structure model' '_database_2.pdbx_database_accession' 7 3 'Structure model' '_pdbx_audit_support.funding_organization' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.9_1692 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? iMOSFLM ? ? ? 7.1.2 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.5.8 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? AutoSol ? ? ? . 4 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 622 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 639 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.17 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 419 ? ? 65.60 165.88 2 1 LYS A 438 ? ? 36.78 56.14 3 1 ASP A 464 ? ? -152.13 89.19 4 1 ASN A 487 ? ? -113.33 67.50 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'University of Michigan Gastrointestinal Peptides Research Center' 'United States' DK034933 1 'Department of Energy (DOE, United States)' 'United States' DE-AC02-06CH11357 2 'Michigan Economic Development Corporation and the Michigan Technology Tri-Corridor' 'United States' 085P1000817 3 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #