HEADER HYDROLASE 15-SEP-17 6B10 TITLE C. JEJUNI AGMATINE DEIMINASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE PEPTIDYL-ARGININE DEIMINASE FAMILY PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAMPYLOBACTER JEJUNI SUBSP. JEJUNI SEROTYPE O:2 SOURCE 3 (STRAIN ATCC 700819 / NCTC 11168); SOURCE 4 ORGANISM_TAXID: 192222; SOURCE 5 STRAIN: ATCC 700819 / NCTC 11168; SOURCE 6 GENE: CJ0949C; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS POLYAMINE BIOSYNTHESIS, AGMATINE IMINOHYDROLASE, PUTRESCINE, N- KEYWDS 2 CARBAMOYLPUTRESCINE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR R.SHEK,K.A.HICKS,J.B.FRENCH REVDAT 5 04-OCT-23 6B10 1 LINK REVDAT 4 01-JAN-20 6B10 1 REMARK REVDAT 3 17-JAN-18 6B10 1 REMARK REVDAT 2 03-JAN-18 6B10 1 JRNL REVDAT 1 13-DEC-17 6B10 0 JRNL AUTH R.SHEK,D.A.DATTMORE,D.P.STIVES,A.L.JACKSON,C.H.CHATFIELD, JRNL AUTH 2 K.A.HICKS,J.B.FRENCH JRNL TITL STRUCTURAL AND FUNCTIONAL BASIS FOR TARGETING CAMPYLOBACTER JRNL TITL 2 JEJUNI AGMATINE DEIMINASE TO OVERCOME ANTIBIOTIC RESISTANCE. JRNL REF BIOCHEMISTRY V. 56 6734 2017 JRNL REFN ISSN 1520-4995 JRNL PMID 29190068 JRNL DOI 10.1021/ACS.BIOCHEM.7B00982 REMARK 2 REMARK 2 RESOLUTION. 2.09 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.09 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.60 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 3 NUMBER OF REFLECTIONS : 38374 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1967 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.09 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.14 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2123 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 72.20 REMARK 3 BIN R VALUE (WORKING SET) : 0.2680 REMARK 3 BIN FREE R VALUE SET COUNT : 118 REMARK 3 BIN FREE R VALUE : 0.2970 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5176 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 22 REMARK 3 SOLVENT ATOMS : 293 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.99 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.84000 REMARK 3 B22 (A**2) : -2.93000 REMARK 3 B33 (A**2) : 4.68000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -4.15000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.249 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.203 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.174 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.856 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.924 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5323 ; 0.005 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4971 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7198 ; 1.022 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11421 ; 0.709 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 645 ; 5.870 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 266 ;38.410 ;25.150 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 926 ;13.060 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;10.040 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 787 ; 0.061 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6025 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1254 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6B10 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-SEP-17. REMARK 100 THE DEPOSITION ID IS D_1000230117. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-MAY-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : A1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.977 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40360 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.090 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.09 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 0.24400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3HVM REMARK 200 REMARK 200 REMARK: ROD-SHAPED REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M POTASSIUM PHOSPHATE, PH 4.6 20% REMARK 280 PEG 3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 40.14800 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 103 REMARK 465 TRP A 104 REMARK 465 GLY A 105 REMARK 465 ASN A 106 REMARK 465 LYS A 107 REMARK 465 PHE A 108 REMARK 465 GLN A 109 REMARK 465 ARG A 161 REMARK 465 ASN A 162 REMARK 465 SER A 163 REMARK 465 HIS A 164 REMARK 465 LYS A 192 REMARK 465 GLY A 193 REMARK 465 ASP A 194 REMARK 465 ASP A 195 REMARK 465 THR A 196 REMARK 465 GLU B 159 REMARK 465 ASN B 160 REMARK 465 ARG B 161 REMARK 465 ASP B 194 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A -7 CG CD OE1 OE2 REMARK 470 LYS A 3 CD CE NZ REMARK 470 GLU A 21 CG CD OE1 OE2 REMARK 470 LYS A 22 CG CD CE NZ REMARK 470 GLU A 31 CG CD OE1 OE2 REMARK 470 LYS A 37 CD CE NZ REMARK 470 LYS A 41 CE NZ REMARK 470 GLU A 60 CG CD OE1 OE2 REMARK 470 LYS A 63 CG CD CE NZ REMARK 470 ASP A 64 CG OD1 OD2 REMARK 470 LYS A 66 CG CD CE NZ REMARK 470 LYS A 72 CG CD CE NZ REMARK 470 LYS A 95 CD CE NZ REMARK 470 SER A 110 OG REMARK 470 LYS A 131 CD CE NZ REMARK 470 GLU A 159 CG CD OE1 OE2 REMARK 470 LEU A 165 CG CD1 CD2 REMARK 470 LYS A 173 CE NZ REMARK 470 ASP A 197 CG OD1 OD2 REMARK 470 GLU A 221 CG CD OE1 OE2 REMARK 470 LYS A 249 NZ REMARK 470 GLU A 255 CG CD OE1 OE2 REMARK 470 ARG A 256 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 324 CG CD1 CD2 REMARK 470 LYS B 3 CG CD CE NZ REMARK 470 LYS B 55 CD CE NZ REMARK 470 GLU B 60 CG CD OE1 OE2 REMARK 470 LYS B 63 CG CD CE NZ REMARK 470 ASP B 64 CG OD1 OD2 REMARK 470 LYS B 66 CG CD CE NZ REMARK 470 LYS B 107 CG CD CE NZ REMARK 470 PHE B 108 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ASN B 114 CG OD1 ND2 REMARK 470 LYS B 119 CG CD CE NZ REMARK 470 LYS B 122 CD CE NZ REMARK 470 LYS B 130 CD CE NZ REMARK 470 LYS B 131 NZ REMARK 470 ASN B 158 CG OD1 ND2 REMARK 470 HIS B 164 CG ND1 CD2 CE1 NE2 REMARK 470 LYS B 192 CG CD CE NZ REMARK 470 ASP B 195 CG OD1 OD2 REMARK 470 THR B 196 OG1 CG2 REMARK 470 GLU B 221 CG CD OE1 OE2 REMARK 470 LYS B 237 CE NZ REMARK 470 GLU B 255 CG CD OE1 OE2 REMARK 470 LYS B 291 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 22 -44.83 -167.25 REMARK 500 SER A 23 -162.31 -71.59 REMARK 500 ASP A 24 36.25 -95.14 REMARK 500 CYS A 73 132.37 -174.82 REMARK 500 ASN A 76 -53.82 -140.53 REMARK 500 GLU A 111 -94.83 46.35 REMARK 500 CYS A 155 -71.80 -76.52 REMARK 500 ASN A 264 41.74 -83.06 REMARK 500 SER A 312 -159.79 -137.08 REMARK 500 ASN B 67 46.01 36.60 REMARK 500 ASN B 76 -65.11 -132.05 REMARK 500 THR B 196 -145.70 80.98 REMARK 500 ASP B 197 97.32 68.18 REMARK 500 ASN B 264 42.85 -87.22 REMARK 500 SER B 312 -159.22 -129.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 403 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE A 83 O REMARK 620 2 ASP A 98 OD1 107.6 REMARK 620 3 PHE A 99 O 162.9 72.3 REMARK 620 4 HOH A 544 O 87.2 148.2 85.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B 403 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE B 83 O REMARK 620 2 ASP B 98 OD1 103.2 REMARK 620 3 PHE B 99 O 172.3 80.5 REMARK 620 4 HOH B 565 O 81.3 90.8 92.0 REMARK 620 5 HOH B 587 O 86.3 151.5 87.4 63.8 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue K B 403 DBREF 6B10 A 1 325 UNP Q0P9V0 Q0P9V0_CAMJE 1 325 DBREF 6B10 B 1 325 UNP Q0P9V0 Q0P9V0_CAMJE 1 325 SEQADV 6B10 GLU A -7 UNP Q0P9V0 EXPRESSION TAG SEQADV 6B10 ASN A -6 UNP Q0P9V0 EXPRESSION TAG SEQADV 6B10 LEU A -5 UNP Q0P9V0 EXPRESSION TAG SEQADV 6B10 TYR A -4 UNP Q0P9V0 EXPRESSION TAG SEQADV 6B10 PHE A -3 UNP Q0P9V0 EXPRESSION TAG SEQADV 6B10 GLN A -2 UNP Q0P9V0 EXPRESSION TAG SEQADV 6B10 GLY A -1 UNP Q0P9V0 EXPRESSION TAG SEQADV 6B10 HIS A 0 UNP Q0P9V0 EXPRESSION TAG SEQADV 6B10 GLU B -7 UNP Q0P9V0 EXPRESSION TAG SEQADV 6B10 ASN B -6 UNP Q0P9V0 EXPRESSION TAG SEQADV 6B10 LEU B -5 UNP Q0P9V0 EXPRESSION TAG SEQADV 6B10 TYR B -4 UNP Q0P9V0 EXPRESSION TAG SEQADV 6B10 PHE B -3 UNP Q0P9V0 EXPRESSION TAG SEQADV 6B10 GLN B -2 UNP Q0P9V0 EXPRESSION TAG SEQADV 6B10 GLY B -1 UNP Q0P9V0 EXPRESSION TAG SEQADV 6B10 HIS B 0 UNP Q0P9V0 EXPRESSION TAG SEQRES 1 A 333 GLU ASN LEU TYR PHE GLN GLY HIS MET ILE LYS SER ILE SEQRES 2 A 333 PRO GLU TRP SER GLU GLN GLU TYR LEU MET LEU SER LEU SEQRES 3 A 333 PRO HIS GLU LYS SER ASP TRP ASN PRO TYR LEU GLU GLU SEQRES 4 A 333 ILE LEU GLN SER TYR LYS GLU PHE VAL LYS VAL VAL SER SEQRES 5 A 333 GLU PHE GLN LYS VAL LEU LEU ILE ALA PRO LYS GLN SER SEQRES 6 A 333 ASP PHE GLU ASN PHE LYS ASP ILE LYS ASN VAL GLU PHE SEQRES 7 A 333 PHE LYS CYS ASP THR ASN ASP THR TRP ILE ARG ASP PHE SEQRES 8 A 333 GLY ALA ILE ASP ILE VAL GLU ASN GLY ARG LEU LYS ALA SEQRES 9 A 333 LEU ASP PHE THR PHE ASN ALA TRP GLY ASN LYS PHE GLN SEQRES 10 A 333 SER GLU LEU ASP ASN ALA VAL ASN SER LYS LEU PHE LYS SEQRES 11 A 333 GLU LYS PHE LYS GLU GLU LEU LYS LYS VAL ASP PHE ILE SEQRES 12 A 333 LEU GLU GLY GLY SER ILE ASP PHE ASN GLY GLU GLY VAL SEQRES 13 A 333 MET LEU THR SER SER HIS CYS LEU LEU ASN GLU ASN ARG SEQRES 14 A 333 ASN SER HIS LEU ASN LYS THR GLN ILE ASP THR LYS LEU SEQRES 15 A 333 LYS GLU ILE PHE GLY LEU LYS GLN ILE ILE TRP LEU GLU SEQRES 16 A 333 ASN GLY PHE ILE LYS GLY ASP ASP THR ASP HIS HIS ILE SEQRES 17 A 333 ASP THR LEU ALA ARG PHE ILE ASP LYS ASN THR ILE ALA SEQRES 18 A 333 HIS CYS ILE CYS GLU ASP GLU GLU ASP GLU HIS TYR LEU SEQRES 19 A 333 PRO LEU GLN LYS MET LYS GLU GLU LEU LYS LYS THR GLY SEQRES 20 A 333 PHE ASP LEU LEU GLU LEU PRO ILE PRO LYS PRO LEU TYR SEQRES 21 A 333 TYR GLU GLU ARG ARG LEU GLY ALA THR TYR ALA ASN PHE SEQRES 22 A 333 VAL PHE ILE ASN ASN ALA LEU ILE VAL PRO PHE TYR LYS SEQRES 23 A 333 ASP LYS ASN ASP GLU ILE ILE ALA LYS ARG LEU SER LYS SEQRES 24 A 333 ALA LEU PRO ASN HIS LYS ILE ILE GLY VAL ASP ALA ARG SEQRES 25 A 333 VAL PHE LEU ARG GLN ASN GLY SER LEU HIS CYS SER CYS SEQRES 26 A 333 GLN ASN ARG PHE LYS GLY LEU ARG SEQRES 1 B 333 GLU ASN LEU TYR PHE GLN GLY HIS MET ILE LYS SER ILE SEQRES 2 B 333 PRO GLU TRP SER GLU GLN GLU TYR LEU MET LEU SER LEU SEQRES 3 B 333 PRO HIS GLU LYS SER ASP TRP ASN PRO TYR LEU GLU GLU SEQRES 4 B 333 ILE LEU GLN SER TYR LYS GLU PHE VAL LYS VAL VAL SER SEQRES 5 B 333 GLU PHE GLN LYS VAL LEU LEU ILE ALA PRO LYS GLN SER SEQRES 6 B 333 ASP PHE GLU ASN PHE LYS ASP ILE LYS ASN VAL GLU PHE SEQRES 7 B 333 PHE LYS CYS ASP THR ASN ASP THR TRP ILE ARG ASP PHE SEQRES 8 B 333 GLY ALA ILE ASP ILE VAL GLU ASN GLY ARG LEU LYS ALA SEQRES 9 B 333 LEU ASP PHE THR PHE ASN ALA TRP GLY ASN LYS PHE GLN SEQRES 10 B 333 SER GLU LEU ASP ASN ALA VAL ASN SER LYS LEU PHE LYS SEQRES 11 B 333 GLU LYS PHE LYS GLU GLU LEU LYS LYS VAL ASP PHE ILE SEQRES 12 B 333 LEU GLU GLY GLY SER ILE ASP PHE ASN GLY GLU GLY VAL SEQRES 13 B 333 MET LEU THR SER SER HIS CYS LEU LEU ASN GLU ASN ARG SEQRES 14 B 333 ASN SER HIS LEU ASN LYS THR GLN ILE ASP THR LYS LEU SEQRES 15 B 333 LYS GLU ILE PHE GLY LEU LYS GLN ILE ILE TRP LEU GLU SEQRES 16 B 333 ASN GLY PHE ILE LYS GLY ASP ASP THR ASP HIS HIS ILE SEQRES 17 B 333 ASP THR LEU ALA ARG PHE ILE ASP LYS ASN THR ILE ALA SEQRES 18 B 333 HIS CYS ILE CYS GLU ASP GLU GLU ASP GLU HIS TYR LEU SEQRES 19 B 333 PRO LEU GLN LYS MET LYS GLU GLU LEU LYS LYS THR GLY SEQRES 20 B 333 PHE ASP LEU LEU GLU LEU PRO ILE PRO LYS PRO LEU TYR SEQRES 21 B 333 TYR GLU GLU ARG ARG LEU GLY ALA THR TYR ALA ASN PHE SEQRES 22 B 333 VAL PHE ILE ASN ASN ALA LEU ILE VAL PRO PHE TYR LYS SEQRES 23 B 333 ASP LYS ASN ASP GLU ILE ILE ALA LYS ARG LEU SER LYS SEQRES 24 B 333 ALA LEU PRO ASN HIS LYS ILE ILE GLY VAL ASP ALA ARG SEQRES 25 B 333 VAL PHE LEU ARG GLN ASN GLY SER LEU HIS CYS SER CYS SEQRES 26 B 333 GLN ASN ARG PHE LYS GLY LEU ARG HET PO4 A 401 5 HET PO4 A 402 5 HET K A 403 1 HET PO4 B 401 5 HET PO4 B 402 5 HET K B 403 1 HETNAM PO4 PHOSPHATE ION HETNAM K POTASSIUM ION FORMUL 3 PO4 4(O4 P 3-) FORMUL 5 K 2(K 1+) FORMUL 9 HOH *293(H2 O) HELIX 1 AA1 TYR A 28 GLU A 45 1 18 HELIX 2 AA2 LYS A 55 GLU A 60 1 6 HELIX 3 AA3 ASN A 61 LYS A 63 5 3 HELIX 4 AA4 TRP A 79 GLY A 84 1 6 HELIX 5 AA5 GLU A 111 LYS A 124 1 14 HELIX 6 AA6 GLU A 137 GLY A 139 5 3 HELIX 7 AA7 SER A 153 ASN A 160 1 8 HELIX 8 AA8 ASN A 166 GLY A 179 1 14 HELIX 9 AA9 HIS A 199 THR A 202 5 4 HELIX 10 AB1 HIS A 224 LYS A 237 1 14 HELIX 11 AB2 LYS A 280 LEU A 293 1 14 HELIX 12 AB3 VAL A 305 ASN A 310 5 6 HELIX 13 AB4 LEU A 313 CYS A 317 5 5 HELIX 14 AB5 TRP B 25 PRO B 27 5 3 HELIX 15 AB6 TYR B 28 GLU B 45 1 18 HELIX 16 AB7 LYS B 55 LYS B 63 5 9 HELIX 17 AB8 TRP B 79 GLY B 84 1 6 HELIX 18 AB9 ASN B 102 GLY B 105 5 4 HELIX 19 AC1 ASN B 106 LYS B 124 1 19 HELIX 20 AC2 GLU B 137 GLY B 139 5 3 HELIX 21 AC3 SER B 153 LEU B 157 1 5 HELIX 22 AC4 ASN B 166 GLY B 179 1 14 HELIX 23 AC5 HIS B 199 THR B 202 5 4 HELIX 24 AC6 HIS B 224 LYS B 237 1 14 HELIX 25 AC7 LYS B 280 LEU B 293 1 14 HELIX 26 AC8 VAL B 305 ASN B 310 5 6 SHEET 1 AA1 4 ILE A 2 LYS A 3 0 SHEET 2 AA1 4 ILE A 86 GLU A 90 -1 O VAL A 89 N LYS A 3 SHEET 3 AA1 4 ARG A 93 THR A 100 -1 O ARG A 93 N GLU A 90 SHEET 4 AA1 4 LYS A 130 ILE A 135 1 O LYS A 130 N ASP A 98 SHEET 1 AA2 4 VAL A 68 LYS A 72 0 SHEET 2 AA2 4 LYS A 48 ALA A 53 1 N VAL A 49 O GLU A 69 SHEET 3 AA2 4 GLN A 11 SER A 17 1 N LEU A 16 O ILE A 52 SHEET 4 AA2 4 GLN A 318 PHE A 321 -1 O GLN A 318 N MET A 15 SHEET 1 AA3 3 ILE A 141 PHE A 143 0 SHEET 2 AA3 3 VAL A 148 SER A 152 -1 O LEU A 150 N ASP A 142 SHEET 3 AA3 3 GLN A 182 LEU A 186 1 O LEU A 186 N THR A 151 SHEET 1 AA4 3 ALA A 204 ASP A 208 0 SHEET 2 AA4 3 THR A 211 ILE A 216 -1 O ALA A 213 N ARG A 205 SHEET 3 AA4 3 ASP A 241 PRO A 246 1 O ASP A 241 N ILE A 212 SHEET 1 AA5 2 TYR A 252 TYR A 253 0 SHEET 2 AA5 2 ARG A 256 ARG A 257 -1 O ARG A 256 N TYR A 253 SHEET 1 AA6 3 VAL A 266 ILE A 268 0 SHEET 2 AA6 3 ALA A 271 PHE A 276 -1 O ILE A 273 N VAL A 266 SHEET 3 AA6 3 LYS A 297 ASP A 302 1 O LYS A 297 N LEU A 272 SHEET 1 AA7 4 ILE B 2 LYS B 3 0 SHEET 2 AA7 4 ILE B 86 GLU B 90 -1 O VAL B 89 N LYS B 3 SHEET 3 AA7 4 ARG B 93 THR B 100 -1 O LEU B 97 N ILE B 86 SHEET 4 AA7 4 LYS B 130 ILE B 135 1 O PHE B 134 N THR B 100 SHEET 1 AA8 4 VAL B 68 LYS B 72 0 SHEET 2 AA8 4 LYS B 48 ALA B 53 1 N VAL B 49 O GLU B 69 SHEET 3 AA8 4 GLN B 11 SER B 17 1 N LEU B 16 O LEU B 50 SHEET 4 AA8 4 CYS B 317 PHE B 321 -1 O GLN B 318 N MET B 15 SHEET 1 AA9 3 ILE B 141 PHE B 143 0 SHEET 2 AA9 3 VAL B 148 SER B 152 -1 O LEU B 150 N ASP B 142 SHEET 3 AA9 3 GLN B 182 LEU B 186 1 O LEU B 186 N THR B 151 SHEET 1 AB1 3 ALA B 204 ASP B 208 0 SHEET 2 AB1 3 THR B 211 ILE B 216 -1 O ALA B 213 N ARG B 205 SHEET 3 AB1 3 ASP B 241 PRO B 246 1 O LEU B 243 N HIS B 214 SHEET 1 AB2 2 TYR B 252 TYR B 253 0 SHEET 2 AB2 2 ARG B 256 ARG B 257 -1 O ARG B 256 N TYR B 253 SHEET 1 AB3 3 VAL B 266 ILE B 268 0 SHEET 2 AB3 3 ALA B 271 PHE B 276 -1 O ILE B 273 N VAL B 266 SHEET 3 AB3 3 LYS B 297 ASP B 302 1 O VAL B 301 N VAL B 274 LINK O PHE A 83 K K A 403 1555 1555 2.83 LINK OD1 ASP A 98 K K A 403 1555 1555 2.81 LINK O PHE A 99 K K A 403 1555 1555 2.52 LINK K K A 403 O HOH A 544 1555 1555 3.00 LINK O PHE B 83 K K B 403 1555 1555 2.84 LINK OD1 ASP B 98 K K B 403 1555 1555 2.77 LINK O PHE B 99 K K B 403 1555 1555 2.61 LINK K K B 403 O HOH B 565 1555 1555 2.93 LINK K K B 403 O HOH B 587 1555 1555 2.77 SITE 1 AC1 3 HIS A 0 GLU A 90 LYS A 130 SITE 1 AC2 5 LEU A 293 PRO A 294 ASN A 295 HIS A 296 SITE 2 AC2 5 HOH A 521 SITE 1 AC3 4 PHE A 83 ASP A 98 PHE A 99 HOH A 544 SITE 1 AC4 2 LYS B 278 ARG B 304 SITE 1 AC5 4 LEU B 293 PRO B 294 ASN B 295 HIS B 296 SITE 1 AC6 5 PHE B 83 ASP B 98 PHE B 99 HOH B 565 SITE 2 AC6 5 HOH B 587 CRYST1 53.400 80.296 83.923 90.00 97.36 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018727 0.000000 0.002418 0.00000 SCALE2 0.000000 0.012454 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012015 0.00000