HEADER DNA BINDING PROTEIN/DNA 18-SEP-17 6B1R TITLE HYDROGEN BONDING COMPLEMENTARY, NOT SIZE COMPLEMENTARITY IS KEY IN THE TITLE 2 FORMATION OF THE DOUBLE HELIX COMPND MOL_ID: 1; COMPND 2 MOLECULE: REVERSE TRANSCRIPTASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CATALYTIC FRAGMENT (UNP RESIDUES 683-937); COMPND 5 EC: 2.7.7.49; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA (5'-D(*CP*TP*TP*AP*TP*(1WA)P*(1WA)P*(1WA))-3'); COMPND 9 CHAIN: B; COMPND 10 ENGINEERED: YES; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: DNA (5'-D(P*(IGU)P*(IGU)P*(IGU)P*AP*TP*AP*AP*G)-3'); COMPND 13 CHAIN: G; COMPND 14 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MOLONEY MURINE LEUKEMIA VIRUS; SOURCE 3 ORGANISM_COMMON: MOMLV; SOURCE 4 ORGANISM_TAXID: 11801; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES; SOURCE 9 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 10 ORGANISM_TAXID: 32630; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 14 ORGANISM_TAXID: 32630 KEYWDS PROTEIN-DNA, AEGIS, UNNATURAL BASE PAIR, HOST-GUEST SYSTEM, DNA KEYWDS 2 BINDING PROTEIN, DNA BINDING PROTEIN-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR I.SINGH,M.M.GEORGIADIS REVDAT 5 04-OCT-23 6B1R 1 LINK REVDAT 4 25-DEC-19 6B1R 1 REMARK REVDAT 3 03-OCT-18 6B1R 1 JRNL REVDAT 2 26-SEP-18 6B1R 1 JRNL REVDAT 1 19-SEP-18 6B1R 0 JRNL AUTH S.HOSHIKA,I.SINGH,C.SWITZER,R.W.MOLT JR.,N.A.LEAL,M.J.KIM, JRNL AUTH 2 M.S.KIM,H.J.KIM,M.M.GEORGIADIS,S.A.BENNER JRNL TITL "SKINNY" AND "FAT" DNA: TWO NEW DOUBLE HELICES. JRNL REF J. AM. CHEM. SOC. V. 140 11655 2018 JRNL REFN ESSN 1520-5126 JRNL PMID 30148365 JRNL DOI 10.1021/JACS.8B05042 REMARK 2 REMARK 2 RESOLUTION. 1.69 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.11.1_2575: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.69 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.86 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 43517 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.880 REMARK 3 FREE R VALUE TEST SET COUNT : 2125 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.8635 - 4.1655 0.98 2924 156 0.1814 0.2097 REMARK 3 2 4.1655 - 3.3072 1.00 2812 162 0.1872 0.2272 REMARK 3 3 3.3072 - 2.8894 1.00 2804 130 0.2053 0.2122 REMARK 3 4 2.8894 - 2.6253 1.00 2754 152 0.2138 0.2393 REMARK 3 5 2.6253 - 2.4372 1.00 2797 134 0.2104 0.2297 REMARK 3 6 2.4372 - 2.2936 1.00 2770 132 0.2084 0.2190 REMARK 3 7 2.2936 - 2.1787 1.00 2742 146 0.1998 0.2445 REMARK 3 8 2.1787 - 2.0839 1.00 2728 146 0.2051 0.2023 REMARK 3 9 2.0839 - 2.0037 1.00 2750 127 0.2115 0.2443 REMARK 3 10 2.0037 - 1.9345 1.00 2741 134 0.2082 0.2638 REMARK 3 11 1.9345 - 1.8741 1.00 2734 127 0.2204 0.2250 REMARK 3 12 1.8741 - 1.8205 1.00 2707 146 0.2255 0.2821 REMARK 3 13 1.8205 - 1.7726 1.00 2731 140 0.2323 0.2690 REMARK 3 14 1.7726 - 1.7293 1.00 2715 138 0.2465 0.2775 REMARK 3 15 1.7293 - 1.6900 1.00 2683 155 0.2750 0.3426 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.640 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 22.41 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2373 REMARK 3 ANGLE : 0.915 3303 REMARK 3 CHIRALITY : 0.054 359 REMARK 3 PLANARITY : 0.007 367 REMARK 3 DIHEDRAL : 10.385 1330 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 24 THROUGH 57 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.0738 172.0809 0.2240 REMARK 3 T TENSOR REMARK 3 T11: 0.1514 T22: 0.2231 REMARK 3 T33: 0.2067 T12: -0.0018 REMARK 3 T13: -0.0663 T23: 0.0287 REMARK 3 L TENSOR REMARK 3 L11: 0.0097 L22: 0.1628 REMARK 3 L33: 0.1700 L12: 0.0469 REMARK 3 L13: 0.0111 L23: 0.1064 REMARK 3 S TENSOR REMARK 3 S11: 0.0902 S12: -0.1719 S13: -0.1011 REMARK 3 S21: 0.0541 S22: 0.0100 S23: -0.0499 REMARK 3 S31: -0.0313 S32: 0.0670 S33: 0.0131 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 58 THROUGH 84 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.2026 173.1775 21.5111 REMARK 3 T TENSOR REMARK 3 T11: 0.1839 T22: 0.3498 REMARK 3 T33: 0.1102 T12: 0.0087 REMARK 3 T13: -0.0184 T23: 0.0555 REMARK 3 L TENSOR REMARK 3 L11: 0.0294 L22: 0.1301 REMARK 3 L33: 0.0548 L12: 0.0351 REMARK 3 L13: 0.0543 L23: -0.0111 REMARK 3 S TENSOR REMARK 3 S11: 0.0391 S12: -0.0476 S13: 0.0050 REMARK 3 S21: 0.0463 S22: 0.0306 S23: 0.0195 REMARK 3 S31: 0.0474 S32: 0.1226 S33: 0.1235 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 85 THROUGH 121 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.9461 173.5625 13.6338 REMARK 3 T TENSOR REMARK 3 T11: 0.1783 T22: 0.2286 REMARK 3 T33: 0.1940 T12: -0.0213 REMARK 3 T13: -0.0115 T23: 0.0502 REMARK 3 L TENSOR REMARK 3 L11: 0.0155 L22: 0.0142 REMARK 3 L33: 0.0636 L12: -0.0179 REMARK 3 L13: -0.0198 L23: -0.0038 REMARK 3 S TENSOR REMARK 3 S11: 0.0503 S12: -0.1830 S13: -0.0656 REMARK 3 S21: 0.1002 S22: 0.0191 S23: 0.0527 REMARK 3 S31: -0.0331 S32: 0.0669 S33: -0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 122 THROUGH 168 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.5260 163.9284 -4.1199 REMARK 3 T TENSOR REMARK 3 T11: 0.2229 T22: 0.1529 REMARK 3 T33: 0.1892 T12: 0.0325 REMARK 3 T13: -0.0269 T23: -0.0072 REMARK 3 L TENSOR REMARK 3 L11: 0.0874 L22: 0.0990 REMARK 3 L33: 0.1855 L12: 0.0998 REMARK 3 L13: -0.0024 L23: -0.0462 REMARK 3 S TENSOR REMARK 3 S11: 0.0585 S12: -0.0667 S13: -0.0610 REMARK 3 S21: 0.0072 S22: -0.0022 S23: -0.0069 REMARK 3 S31: 0.1176 S32: 0.0873 S33: 0.0005 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 169 THROUGH 194 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.0445 175.8266 12.4165 REMARK 3 T TENSOR REMARK 3 T11: 0.1822 T22: 0.2498 REMARK 3 T33: 0.1514 T12: -0.0008 REMARK 3 T13: 0.0026 T23: 0.0406 REMARK 3 L TENSOR REMARK 3 L11: 0.0246 L22: 0.0210 REMARK 3 L33: 0.0157 L12: -0.0170 REMARK 3 L13: 0.0196 L23: -0.0180 REMARK 3 S TENSOR REMARK 3 S11: 0.0042 S12: -0.2886 S13: -0.1329 REMARK 3 S21: 0.0575 S22: -0.0756 S23: 0.0381 REMARK 3 S31: -0.0128 S32: 0.0947 S33: 0.0001 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 195 THROUGH 278 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.3475 159.2037 -7.4913 REMARK 3 T TENSOR REMARK 3 T11: 0.2496 T22: 0.2039 REMARK 3 T33: 0.2430 T12: 0.1076 REMARK 3 T13: 0.0020 T23: -0.0347 REMARK 3 L TENSOR REMARK 3 L11: 0.1025 L22: 0.1569 REMARK 3 L33: 0.0776 L12: 0.1089 REMARK 3 L13: 0.0103 L23: -0.0149 REMARK 3 S TENSOR REMARK 3 S11: -0.0251 S12: 0.1237 S13: -0.2727 REMARK 3 S21: -0.0985 S22: 0.0035 S23: -0.0219 REMARK 3 S31: 0.1908 S32: 0.2136 S33: -0.0291 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 8 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.6573 155.8678 12.8832 REMARK 3 T TENSOR REMARK 3 T11: 0.4671 T22: 0.4534 REMARK 3 T33: 0.6562 T12: -0.2797 REMARK 3 T13: 0.1042 T23: 0.0421 REMARK 3 L TENSOR REMARK 3 L11: 0.0339 L22: 0.0331 REMARK 3 L33: 0.0690 L12: 0.0265 REMARK 3 L13: 0.0453 L23: 0.0244 REMARK 3 S TENSOR REMARK 3 S11: -0.1631 S12: 0.0256 S13: -0.3198 REMARK 3 S21: -0.0941 S22: -0.1822 S23: 0.0272 REMARK 3 S31: 0.0837 S32: 0.0122 S33: -0.0241 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'G' AND (RESID 9 THROUGH 16 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.4831 154.3684 16.4276 REMARK 3 T TENSOR REMARK 3 T11: 0.2932 T22: 0.2564 REMARK 3 T33: 1.0254 T12: -0.3093 REMARK 3 T13: -0.0560 T23: 0.1307 REMARK 3 L TENSOR REMARK 3 L11: 0.1138 L22: 0.0360 REMARK 3 L33: 0.0119 L12: 0.0561 REMARK 3 L13: -0.0467 L23: -0.0213 REMARK 3 S TENSOR REMARK 3 S11: -0.0067 S12: -0.1103 S13: -0.0556 REMARK 3 S21: 0.0756 S22: -0.1575 S23: -0.0937 REMARK 3 S31: 0.1455 S32: -0.1898 S33: -0.0744 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6B1R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-SEP-17. REMARK 100 THE DEPOSITION ID IS D_1000229043. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-APR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97931 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.22 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43517 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.690 REMARK 200 RESOLUTION RANGE LOW (A) : 146.194 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.900 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : 0.06600 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 15.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.69 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 0.64400 REMARK 200 R SYM FOR SHELL (I) : 0.64400 REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4XO0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 6 % PEG 4000, 5 MM MAGNESIUM ACETATE REMARK 280 AND 50 MM ADA (PH 6.5), VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 27.60700 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 73.09700 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.60700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 73.09700 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -55.21400 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 292.38800 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 20 REMARK 465 SER A 21 REMARK 465 HIS A 22 REMARK 465 MET A 23 REMARK 465 LYS A 102 REMARK 465 LYS A 103 REMARK 465 PRO A 104 REMARK 465 GLY A 105 REMARK 465 THR A 106 REMARK 465 ASN A 107 REMARK 465 ASP A 108 REMARK 465 ASP A 174 REMARK 465 PRO A 175 REMARK 465 GLU A 176 REMARK 465 MET A 177 REMARK 465 GLY A 178 REMARK 465 ILE A 179 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 41 118.36 -166.43 REMARK 500 VAL A 223 -107.55 56.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 506 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH A 507 DISTANCE = 6.35 ANGSTROMS DBREF 6B1R A 24 278 UNP P03355 POL_MLVMS 683 937 DBREF 6B1R B 1 8 PDB 6B1R 6B1R 1 8 DBREF 6B1R G 9 16 PDB 6B1R 6B1R 9 16 SEQADV 6B1R GLY A 20 UNP P03355 EXPRESSION TAG SEQADV 6B1R SER A 21 UNP P03355 EXPRESSION TAG SEQADV 6B1R HIS A 22 UNP P03355 EXPRESSION TAG SEQADV 6B1R MET A 23 UNP P03355 EXPRESSION TAG SEQRES 1 A 259 GLY SER HIS MET THR TRP LEU SER ASP PHE PRO GLN ALA SEQRES 2 A 259 TRP ALA GLU THR GLY GLY MET GLY LEU ALA VAL ARG GLN SEQRES 3 A 259 ALA PRO LEU ILE ILE PRO LEU LYS ALA THR SER THR PRO SEQRES 4 A 259 VAL SER ILE LYS GLN TYR PRO MET SER GLN GLU ALA ARG SEQRES 5 A 259 LEU GLY ILE LYS PRO HIS ILE GLN ARG LEU LEU ASP GLN SEQRES 6 A 259 GLY ILE LEU VAL PRO CYS GLN SER PRO TRP ASN THR PRO SEQRES 7 A 259 LEU LEU PRO VAL LYS LYS PRO GLY THR ASN ASP TYR ARG SEQRES 8 A 259 PRO VAL GLN ASP LEU ARG GLU VAL ASN LYS ARG VAL GLU SEQRES 9 A 259 ASP ILE HIS PRO THR VAL PRO ASN PRO TYR ASN LEU LEU SEQRES 10 A 259 SER GLY LEU PRO PRO SER HIS GLN TRP TYR THR VAL LEU SEQRES 11 A 259 ASP LEU LYS ASP ALA PHE PHE CYS LEU ARG LEU HIS PRO SEQRES 12 A 259 THR SER GLN PRO LEU PHE ALA PHE GLU TRP ARG ASP PRO SEQRES 13 A 259 GLU MET GLY ILE SER GLY GLN LEU THR TRP THR ARG LEU SEQRES 14 A 259 PRO GLN GLY PHE LYS ASN SER PRO THR LEU PHE ASP GLU SEQRES 15 A 259 ALA LEU HIS ARG ASP LEU ALA ASP PHE ARG ILE GLN HIS SEQRES 16 A 259 PRO ASP LEU ILE LEU LEU GLN TYR VAL ASP ASP LEU LEU SEQRES 17 A 259 LEU ALA ALA THR SER GLU LEU ASP CYS GLN GLN GLY THR SEQRES 18 A 259 ARG ALA LEU LEU GLN THR LEU GLY ASN LEU GLY TYR ARG SEQRES 19 A 259 ALA SER ALA LYS LYS ALA GLN ILE CYS GLN LYS GLN VAL SEQRES 20 A 259 LYS TYR LEU GLY TYR LEU LEU LYS GLU GLY GLN ARG SEQRES 1 B 8 DC DT DT DA DT 1WA 1WA 1WA SEQRES 1 G 8 IGU IGU IGU DA DT DA DA DG HET 1WA B 6 22 HET 1WA B 7 22 HET 1WA B 8 22 HET IGU G 9 22 HET IGU G 10 22 HET IGU G 11 22 HETNAM 1WA 2-AMINO-8-(2-DEOXY-5-O-PHOSPHONO-BETA-D-ERYTHRO- HETNAM 2 1WA PENTOFURANOSYL)-4-HYDROXY-1H-IMIDAZO[1,2-A][1,3, HETNAM 3 1WA 5]TRIAZINE-5,8-DIIUM HETNAM IGU 2'-DEOXYISOGUANINE-5'-MONOPHOSPHATE FORMUL 2 1WA 3(C10 H16 N5 O7 P 2+) FORMUL 3 IGU 3(C10 H14 N5 O7 P) FORMUL 4 HOH *220(H2 O) HELIX 1 AA1 THR A 24 PHE A 29 1 6 HELIX 2 AA2 TRP A 33 GLY A 38 1 6 HELIX 3 AA3 SER A 67 GLN A 84 1 18 HELIX 4 AA4 LEU A 115 LYS A 120 1 6 HELIX 5 AA5 ASN A 131 GLY A 138 1 8 HELIX 6 AA6 ALA A 154 LEU A 158 5 5 HELIX 7 AA7 SER A 164 ALA A 169 5 6 HELIX 8 AA8 ASN A 194 HIS A 214 1 21 HELIX 9 AA9 SER A 232 GLY A 251 1 20 SHEET 1 AA1 3 LEU A 87 CYS A 90 0 SHEET 2 AA1 3 GLN A 182 TRP A 185 -1 O THR A 184 N VAL A 88 SHEET 3 AA1 3 PHE A 170 GLU A 171 -1 N PHE A 170 O LEU A 183 SHEET 1 AA2 2 LEU A 98 LEU A 99 0 SHEET 2 AA2 2 VAL A 112 GLN A 113 -1 O VAL A 112 N LEU A 99 SHEET 1 AA3 4 ILE A 218 TYR A 222 0 SHEET 2 AA3 4 ASP A 225 ALA A 230 -1 O LEU A 227 N LEU A 220 SHEET 3 AA3 4 TRP A 145 ASP A 150 -1 N LEU A 149 O LEU A 226 SHEET 4 AA3 4 GLN A 260 GLN A 263 -1 O GLN A 263 N TYR A 146 SHEET 1 AA4 2 VAL A 266 TYR A 268 0 SHEET 2 AA4 2 TYR A 271 LEU A 273 -1 O LEU A 273 N VAL A 266 LINK O3' DT B 5 P 1WA B 6 1555 1555 1.59 LINK O3' 1WA B 6 P 1WA B 7 1555 1555 1.59 LINK O3' 1WA B 7 P 1WA B 8 1555 1555 1.59 LINK O3' 1WA B 8 P IGU G 9 1555 2475 1.61 LINK O3' IGU G 9 P IGU G 10 1555 1555 1.59 LINK O3' IGU G 10 P IGU G 11 1555 1555 1.59 LINK O3' IGU G 11 P DA G 12 1555 1555 1.59 CRYST1 55.214 146.194 47.073 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018111 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006840 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021244 0.00000