HEADER TRANSFERASE 21-SEP-17 6B3B TITLE APRA METHYLTRANSFERASE 1 - GNAT IN COMPLEX WITH MN2+ , SAM, AND TITLE 2 MALONATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: APRA METHYLTRANSFERASE 1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MOOREA BOUILLONII; SOURCE 3 ORGANISM_TAXID: 207920; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS METHYLTRANSFERASE, APRATOXIN, GCN5 RELATED N-ACETYLTRANSFERASE, KEYWDS 2 TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.A.SKIBA,J.L.SMITH REVDAT 4 04-OCT-23 6B3B 1 LINK REVDAT 3 04-DEC-19 6B3B 1 REMARK REVDAT 2 27-DEC-17 6B3B 1 JRNL REVDAT 1 15-NOV-17 6B3B 0 JRNL AUTH M.A.SKIBA,A.P.SIKKEMA,N.A.MOSS,C.L.TRAN,R.M.STURGIS, JRNL AUTH 2 L.GERWICK,W.H.GERWICK,D.H.SHERMAN,J.L.SMITH JRNL TITL A MONONUCLEAR IRON-DEPENDENT METHYLTRANSFERASE CATALYZES JRNL TITL 2 INITIAL STEPS IN ASSEMBLY OF THE APRATOXIN A POLYKETIDE JRNL TITL 3 STARTER UNIT. JRNL REF ACS CHEM. BIOL. V. 12 3039 2017 JRNL REFN ESSN 1554-8937 JRNL PMID 29096064 JRNL DOI 10.1021/ACSCHEMBIO.7B00746 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.99 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 91.7 REMARK 3 NUMBER OF REFLECTIONS : 61418 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.280 REMARK 3 FREE R VALUE TEST SET COUNT : 1998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.0002 - 5.4642 0.87 3960 135 0.1542 0.1814 REMARK 3 2 5.4642 - 4.3381 0.88 3996 140 0.1308 0.1407 REMARK 3 3 4.3381 - 3.7900 0.90 4057 138 0.1361 0.1725 REMARK 3 4 3.7900 - 3.4436 0.88 4035 139 0.1532 0.1996 REMARK 3 5 3.4436 - 3.1968 0.88 4014 134 0.1654 0.1967 REMARK 3 6 3.1968 - 3.0084 0.90 4092 138 0.1718 0.1967 REMARK 3 7 3.0084 - 2.8577 0.92 4153 139 0.1729 0.2225 REMARK 3 8 2.8577 - 2.7334 0.92 4228 140 0.1788 0.2248 REMARK 3 9 2.7334 - 2.6281 0.93 4182 146 0.1789 0.2403 REMARK 3 10 2.6281 - 2.5375 0.93 4238 145 0.1845 0.2097 REMARK 3 11 2.5375 - 2.4581 0.93 4254 145 0.1887 0.2247 REMARK 3 12 2.4581 - 2.3879 0.88 4005 133 0.1844 0.2333 REMARK 3 13 2.3879 - 2.3250 0.92 4178 139 0.1903 0.2526 REMARK 3 14 2.3250 - 2.2683 0.93 4261 145 0.2050 0.2448 REMARK 3 15 2.2683 - 2.2167 0.94 4333 143 0.2030 0.2448 REMARK 3 16 2.2167 - 2.1695 0.94 4204 144 0.2118 0.2937 REMARK 3 17 2.1695 - 2.1261 0.94 4325 145 0.2237 0.2327 REMARK 3 18 2.1261 - 2.0860 0.95 4274 147 0.2213 0.2675 REMARK 3 19 2.0860 - 2.0488 0.95 4331 145 0.2347 0.2754 REMARK 3 20 2.0488 - 2.0140 0.94 4272 146 0.2566 0.3004 REMARK 3 21 2.0140 - 1.9816 0.95 4394 150 0.2697 0.3184 REMARK 3 22 1.9816 - 1.9511 0.95 4237 143 0.2833 0.3289 REMARK 3 23 1.9511 - 1.9224 0.90 4147 137 0.2877 0.3185 REMARK 3 24 1.9224 - 1.8953 0.91 4127 140 0.3034 0.3286 REMARK 3 25 1.8953 - 1.8697 0.93 4228 143 0.3305 0.3384 REMARK 3 26 1.8697 - 1.8454 0.85 3848 134 0.3572 0.3601 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.390 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.39 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 5228 REMARK 3 ANGLE : 0.833 7079 REMARK 3 CHIRALITY : 0.052 803 REMARK 3 PLANARITY : 0.005 903 REMARK 3 DIHEDRAL : 14.783 3165 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 237 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.6762 0.0665 -16.6969 REMARK 3 T TENSOR REMARK 3 T11: 0.4127 T22: 0.4206 REMARK 3 T33: 0.2231 T12: 0.1705 REMARK 3 T13: -0.0332 T23: -0.0989 REMARK 3 L TENSOR REMARK 3 L11: 2.0032 L22: 1.9017 REMARK 3 L33: 2.9160 L12: -0.6152 REMARK 3 L13: 0.1562 L23: 0.1204 REMARK 3 S TENSOR REMARK 3 S11: -0.0847 S12: -0.4306 S13: -0.0783 REMARK 3 S21: 0.4299 S22: 0.3064 S23: -0.1042 REMARK 3 S31: 0.5618 S32: 0.5988 S33: -0.1232 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 238 THROUGH 448 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.9724 -4.9219 -46.2791 REMARK 3 T TENSOR REMARK 3 T11: 0.1841 T22: 0.1440 REMARK 3 T33: 0.1854 T12: -0.0312 REMARK 3 T13: -0.0012 T23: -0.0374 REMARK 3 L TENSOR REMARK 3 L11: 1.9832 L22: 0.9304 REMARK 3 L33: 0.6748 L12: -0.8829 REMARK 3 L13: -0.6999 L23: 0.5078 REMARK 3 S TENSOR REMARK 3 S11: 0.0020 S12: -0.1612 S13: 0.1797 REMARK 3 S21: 0.0154 S22: 0.0447 S23: -0.0869 REMARK 3 S31: -0.0871 S32: 0.0749 S33: -0.0387 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 449 THROUGH 629 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.0184 -11.5200 -53.5989 REMARK 3 T TENSOR REMARK 3 T11: 0.1627 T22: 0.1457 REMARK 3 T33: 0.2076 T12: -0.0220 REMARK 3 T13: 0.0386 T23: -0.0162 REMARK 3 L TENSOR REMARK 3 L11: 1.1753 L22: 0.5832 REMARK 3 L33: 1.3834 L12: 0.0503 REMARK 3 L13: 0.7603 L23: 0.4618 REMARK 3 S TENSOR REMARK 3 S11: 0.0015 S12: -0.0626 S13: 0.0280 REMARK 3 S21: 0.0103 S22: -0.0023 S23: 0.0881 REMARK 3 S31: 0.0102 S32: -0.0897 S33: -0.0055 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6B3B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-SEP-17. REMARK 100 THE DEPOSITION ID IS D_1000230185. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUL-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 61427 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 46.985 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 200 DATA REDUNDANCY : 3.440 REMARK 200 R MERGE (I) : 0.09900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.7200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.96 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.26 REMARK 200 R MERGE FOR SHELL (I) : 0.75500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.230 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 6B3A REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.05 M SODIUM MALONATE, 16% PEG3350, REMARK 280 PH 7, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.35250 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 68.37750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 44.16850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 68.37750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.35250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 44.16850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27500 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -5.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -22 REMARK 465 HIS A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 SER A -15 REMARK 465 SER A -14 REMARK 465 GLY A -13 REMARK 465 VAL A -12 REMARK 465 ASP A -11 REMARK 465 LEU A -10 REMARK 465 GLY A -9 REMARK 465 THR A -8 REMARK 465 GLU A -7 REMARK 465 ASN A -6 REMARK 465 LEU A -5 REMARK 465 TYR A -4 REMARK 465 PHE A -3 REMARK 465 GLN A -2 REMARK 465 SER A -1 REMARK 465 ASN A 0 REMARK 465 ASP A 150 REMARK 465 GLU A 151 REMARK 465 SER A 152 REMARK 465 LYS A 153 REMARK 465 LYS A 154 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 149 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1035 O HOH A 1132 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 548 CA - CB - CG ANGL. DEV. = 15.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 102 -7.67 77.24 REMARK 500 GLU A 182 -130.46 66.34 REMARK 500 GLN A 212 33.22 -98.02 REMARK 500 ASN A 228 -162.94 -76.27 REMARK 500 ASP A 389 50.16 -97.17 REMARK 500 THR A 544 54.14 -119.99 REMARK 500 ALA A 545 10.72 -145.24 REMARK 500 ASN A 565 74.50 64.45 REMARK 500 ASN A 620 75.95 -114.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 702 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 369 NE2 REMARK 620 2 HIS A 456 NE2 93.5 REMARK 620 3 GLN A 461 OE1 93.0 91.9 REMARK 620 4 MLI A 703 O8 101.2 87.5 165.8 REMARK 620 5 MLI A 703 O6 175.4 90.7 85.1 80.8 REMARK 620 6 HOH A 851 O 92.2 174.3 88.0 91.3 83.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SAM A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MLI A 703 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 704 DBREF1 6B3B A 2 629 UNP A0A1U7N2Z8_9CYAN DBREF2 6B3B A A0A1U7N2Z8 2 629 SEQADV 6B3B MET A -22 UNP A0A1U7N2Z EXPRESSION TAG SEQADV 6B3B HIS A -21 UNP A0A1U7N2Z EXPRESSION TAG SEQADV 6B3B HIS A -20 UNP A0A1U7N2Z EXPRESSION TAG SEQADV 6B3B HIS A -19 UNP A0A1U7N2Z EXPRESSION TAG SEQADV 6B3B HIS A -18 UNP A0A1U7N2Z EXPRESSION TAG SEQADV 6B3B HIS A -17 UNP A0A1U7N2Z EXPRESSION TAG SEQADV 6B3B HIS A -16 UNP A0A1U7N2Z EXPRESSION TAG SEQADV 6B3B SER A -15 UNP A0A1U7N2Z EXPRESSION TAG SEQADV 6B3B SER A -14 UNP A0A1U7N2Z EXPRESSION TAG SEQADV 6B3B GLY A -13 UNP A0A1U7N2Z EXPRESSION TAG SEQADV 6B3B VAL A -12 UNP A0A1U7N2Z EXPRESSION TAG SEQADV 6B3B ASP A -11 UNP A0A1U7N2Z EXPRESSION TAG SEQADV 6B3B LEU A -10 UNP A0A1U7N2Z EXPRESSION TAG SEQADV 6B3B GLY A -9 UNP A0A1U7N2Z EXPRESSION TAG SEQADV 6B3B THR A -8 UNP A0A1U7N2Z EXPRESSION TAG SEQADV 6B3B GLU A -7 UNP A0A1U7N2Z EXPRESSION TAG SEQADV 6B3B ASN A -6 UNP A0A1U7N2Z EXPRESSION TAG SEQADV 6B3B LEU A -5 UNP A0A1U7N2Z EXPRESSION TAG SEQADV 6B3B TYR A -4 UNP A0A1U7N2Z EXPRESSION TAG SEQADV 6B3B PHE A -3 UNP A0A1U7N2Z EXPRESSION TAG SEQADV 6B3B GLN A -2 UNP A0A1U7N2Z EXPRESSION TAG SEQADV 6B3B SER A -1 UNP A0A1U7N2Z EXPRESSION TAG SEQADV 6B3B ASN A 0 UNP A0A1U7N2Z EXPRESSION TAG SEQADV 6B3B ALA A 1 UNP A0A1U7N2Z EXPRESSION TAG SEQADV 6B3B ILE A 274 UNP A0A1U7N2Z SER 274 ENGINEERED MUTATION SEQADV 6B3B PRO A 528 UNP A0A1U7N2Z GLN 528 ENGINEERED MUTATION SEQRES 1 A 652 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 652 GLY THR GLU ASN LEU TYR PHE GLN SER ASN ALA LEU ASP SEQRES 3 A 652 LYS ILE ASN ARG TYR ALA HIS GLY PHE VAL ALA VAL PRO SEQRES 4 A 652 VAL ILE CYS ALA CYS SER GLU ALA GLY VAL PHE GLU LEU SEQRES 5 A 652 LEU SER GLN LYS LYS SER LEU LYS LEU GLU GLU ILE VAL SEQRES 6 A 652 GLU HIS LEU ALA ALA ASN SER GLY HIS LEU MET VAL ALA SEQRES 7 A 652 MET ARG LEU LEU GLU SER LEU SER PHE LEU TYR ARG SER SEQRES 8 A 652 GLN ALA GLU GLU TYR ILE LEU THR GLU GLN SER GLN GLN SEQRES 9 A 652 HIS GLN ILE ILE PRO LYS ALA LEU MET SER LEU TYR LYS SEQRES 10 A 652 TYR PRO PHE GLU LEU TYR LEU LYS GLY GLU VAL GLU THR SEQRES 11 A 652 GLY ILE SER ASN TRP ILE ASN CYS SER SER ARG ARG TRP SEQRES 12 A 652 ASP THR GLU ASN SER LEU LEU SER ASP LEU LEU ASP GLY SEQRES 13 A 652 VAL LEU LEU ILE PRO LEU LEU LEU GLU LEU LYS LYS GLN SEQRES 14 A 652 ASN LEU LEU ASP GLU SER LYS LYS ILE PHE ASN THR LEU SEQRES 15 A 652 THR ASN SER LEU LYS GLN GLU LEU SER THR LEU PHE ILE SEQRES 16 A 652 ASN LEU GLY TRP ALA GLU GLU LYS THR GLU GLY LEU TYR SEQRES 17 A 652 LEU THR ASP ILE GLY ARG PHE MET ARG ASP ARG SER LEU SEQRES 18 A 652 ASN LEU GLY THR THR ALA SER TYR ALA PRO MET LEU LEU SEQRES 19 A 652 GLN MET LYS GLU LEU LEU PHE GLY ASN PRO GLN ARG VAL SEQRES 20 A 652 PHE GLN ARG ASN LYS THR GLU LYS GLU ARG HIS VAL ASN SEQRES 21 A 652 ARG THR LEU ASN VAL VAL ALA SER GLY PHE GLN HIS GLU SEQRES 22 A 652 LYS PHE PHE ALA ASP THR ASP LYS ILE ILE ILE SER ILE SEQRES 23 A 652 PHE ASN GLN GLN PRO ILE GLU GLU GLN PRO ILE TYR ILE SEQRES 24 A 652 VAL ASP MET GLY CYS GLY ASP GLY THR LEU LEU LYS ARG SEQRES 25 A 652 ILE TYR LYS ILE ILE LYS GLN PHE SER ALA ARG GLY LYS SEQRES 26 A 652 VAL LEU THR GLU TYR PRO ILE ILE MET VAL GLY VAL ASP SEQRES 27 A 652 TYR ASN GLN GLU ALA LEU ASP VAL THR ASP LYS ASN LEU SEQRES 28 A 652 VAL ASP ILE PRO HIS LEU VAL ILE PRO GLY ASP ILE GLY SEQRES 29 A 652 ALA PRO GLU LYS LEU LEU GLU GLN LEU LYS ALA GLN GLY SEQRES 30 A 652 ILE GLU PRO GLU LYS VAL LEU HIS ILE ARG SER PHE LEU SEQRES 31 A 652 ASP HIS ASP ARG PRO PHE ILE ALA PRO LYS ASN THR GLU SEQRES 32 A 652 ILE ALA GLN ALA ARG SER GLN LEU ASP TYR GLN VAL VAL SEQRES 33 A 652 ASP VAL ASP ARG GLU GLY LYS LEU ILE PRO PRO HIS ILE SEQRES 34 A 652 ALA VAL GLN SER LEU VAL GLU HIS LEU GLU ARG TRP SER SEQRES 35 A 652 SER ILE ILE THR ARG HIS GLY LEU LEU LEU LEU GLU VAL SEQRES 36 A 652 HIS SER LEU THR PRO ALA VAL VAL LYS LYS TYR ILE ASP SEQRES 37 A 652 GLU SER GLU SER LEU HIS PHE ASP ALA TYR HIS ALA PHE SEQRES 38 A 652 SER MET GLN HIS LEU VAL GLU ALA ASP VAL PHE LEU MET SEQRES 39 A 652 ALA ALA ALA GLU VAL GLY LEU PHE SER ARG LYS GLU ALA SEQRES 40 A 652 PHE ARG LYS TYR PRO LYS THR LEU PRO LEU THR ARG ILE SEQRES 41 A 652 THR VAL ASN HIS PHE GLU LYS ARG LYS TYR GLN ILE ARG SEQRES 42 A 652 TYR ALA THR VAL ASN ASP ILE PRO ASN LEU LEU LYS CYS SEQRES 43 A 652 ALA THR PHE ASN PRO PRO VAL ASN GLU PRO PHE PHE GLN SEQRES 44 A 652 VAL LEU LEU LYS GLN THR PRO THR ALA HIS LEU LEU LEU SEQRES 45 A 652 GLU TYR GLN GLY GLU LEU VAL ALA ALA ILE PHE THR GLU SEQRES 46 A 652 THR LYS ASN SER ASN GLU VAL LEU GLY ILE ARG GLU PHE SEQRES 47 A 652 LEU VAL ARG THR SER VAL GLU ASN TRP GLN VAL LEU ALA SEQRES 48 A 652 LYS ASP LEU LEU GLU PHE VAL GLU GLN TRP GLY VAL VAL SEQRES 49 A 652 LYS PRO GLY ILE LYS GLU ILE GLU GLY LEU LEU LYS TYR SEQRES 50 A 652 HIS GLU ALA ILE SER ASN PHE GLN LYS SER LYS TRP TYR SEQRES 51 A 652 GLN SER HET SAM A 701 27 HET MN A 702 1 HET MLI A 703 7 HET GOL A 704 6 HETNAM SAM S-ADENOSYLMETHIONINE HETNAM MN MANGANESE (II) ION HETNAM MLI MALONATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 SAM C15 H22 N6 O5 S FORMUL 3 MN MN 2+ FORMUL 4 MLI C3 H2 O4 2- FORMUL 5 GOL C3 H8 O3 FORMUL 6 HOH *447(H2 O) HELIX 1 AA1 LEU A 2 GLY A 25 1 24 HELIX 2 AA2 GLY A 25 LYS A 33 1 9 HELIX 3 AA3 LYS A 37 ALA A 46 1 10 HELIX 4 AA4 ASN A 48 LEU A 62 1 15 HELIX 5 AA5 GLU A 77 ILE A 85 5 9 HELIX 6 AA6 PRO A 86 TYR A 95 5 10 HELIX 7 AA7 PRO A 96 LEU A 101 1 6 HELIX 8 AA8 ILE A 109 ARG A 118 1 10 HELIX 9 AA9 ARG A 119 THR A 122 5 4 HELIX 10 AB1 ASN A 124 GLN A 146 1 23 HELIX 11 AB2 THR A 160 LEU A 174 1 15 HELIX 12 AB3 THR A 187 ARG A 196 1 10 HELIX 13 AB4 SER A 197 SER A 205 1 9 HELIX 14 AB5 TYR A 206 GLN A 212 1 7 HELIX 15 AB6 GLN A 212 GLY A 219 1 8 HELIX 16 AB7 PRO A 221 GLN A 226 1 6 HELIX 17 AB8 ASN A 237 LYS A 251 1 15 HELIX 18 AB9 PHE A 252 ASP A 255 5 4 HELIX 19 AC1 THR A 256 GLN A 266 1 11 HELIX 20 AC2 PRO A 268 GLN A 272 5 5 HELIX 21 AC3 GLY A 284 SER A 298 1 15 HELIX 22 AC4 ALA A 299 VAL A 303 5 5 HELIX 23 AC5 ASN A 317 LEU A 328 1 12 HELIX 24 AC6 ALA A 342 GLN A 353 1 12 HELIX 25 AC7 GLU A 356 GLU A 358 5 3 HELIX 26 AC8 LEU A 367 ARG A 371 5 5 HELIX 27 AC9 ASN A 378 SER A 386 1 9 HELIX 28 AD1 PRO A 403 SER A 420 1 18 HELIX 29 AD2 THR A 436 TYR A 443 1 8 HELIX 30 AD3 GLU A 448 SER A 459 1 12 HELIX 31 AD4 GLU A 465 VAL A 476 1 12 HELIX 32 AD5 THR A 513 ASN A 515 5 3 HELIX 33 AD6 ASP A 516 LYS A 522 1 7 HELIX 34 AD7 ASN A 531 THR A 542 1 12 HELIX 35 AD8 ASN A 583 LYS A 602 1 20 HELIX 36 AD9 GLY A 610 ASN A 620 1 11 SHEET 1 AA1 2 LEU A 65 ARG A 67 0 SHEET 2 AA1 2 TYR A 73 LEU A 75 -1 O ILE A 74 N TYR A 66 SHEET 1 AA2 2 ALA A 177 GLU A 178 0 SHEET 2 AA2 2 TYR A 185 LEU A 186 -1 O TYR A 185 N GLU A 178 SHEET 1 AA3 7 HIS A 333 PRO A 337 0 SHEET 2 AA3 7 ILE A 310 ASP A 315 1 N GLY A 313 O LEU A 334 SHEET 3 AA3 7 TYR A 275 MET A 279 1 N ILE A 276 O VAL A 312 SHEET 4 AA3 7 VAL A 360 SER A 365 1 O LEU A 361 N TYR A 275 SHEET 5 AA3 7 LEU A 427 VAL A 432 1 O LEU A 428 N HIS A 362 SHEET 6 AA3 7 ILE A 497 LYS A 504 -1 O PHE A 502 N LEU A 427 SHEET 7 AA3 7 LEU A 478 SER A 480 -1 N PHE A 479 O GLU A 503 SHEET 1 AA4 7 HIS A 333 PRO A 337 0 SHEET 2 AA4 7 ILE A 310 ASP A 315 1 N GLY A 313 O LEU A 334 SHEET 3 AA4 7 TYR A 275 MET A 279 1 N ILE A 276 O VAL A 312 SHEET 4 AA4 7 VAL A 360 SER A 365 1 O LEU A 361 N TYR A 275 SHEET 5 AA4 7 LEU A 427 VAL A 432 1 O LEU A 428 N HIS A 362 SHEET 6 AA4 7 ILE A 497 LYS A 504 -1 O PHE A 502 N LEU A 427 SHEET 7 AA4 7 ARG A 486 TYR A 488 -1 N ARG A 486 O VAL A 499 SHEET 1 AA5 2 ASP A 394 VAL A 395 0 SHEET 2 AA5 2 LEU A 401 ILE A 402 -1 O ILE A 402 N ASP A 394 SHEET 1 AA6 5 GLN A 508 TYR A 511 0 SHEET 2 AA6 5 LEU A 547 TYR A 551 -1 O LEU A 548 N ARG A 510 SHEET 3 AA6 5 GLU A 554 LYS A 564 -1 O ILE A 559 N LEU A 547 SHEET 4 AA6 5 VAL A 569 VAL A 577 -1 O ARG A 573 N PHE A 560 SHEET 5 AA6 5 ALA A 524 THR A 525 -1 N ALA A 524 O VAL A 577 SHEET 1 AA7 5 GLN A 508 TYR A 511 0 SHEET 2 AA7 5 LEU A 547 TYR A 551 -1 O LEU A 548 N ARG A 510 SHEET 3 AA7 5 GLU A 554 LYS A 564 -1 O ILE A 559 N LEU A 547 SHEET 4 AA7 5 VAL A 569 VAL A 577 -1 O ARG A 573 N PHE A 560 SHEET 5 AA7 5 GLU A 607 GLU A 609 1 O GLU A 609 N LEU A 570 LINK NE2 HIS A 369 MN MN A 702 1555 1555 2.21 LINK NE2 HIS A 456 MN MN A 702 1555 1555 2.23 LINK OE1 GLN A 461 MN MN A 702 1555 1555 2.18 LINK MN MN A 702 O8 MLI A 703 1555 1555 2.00 LINK MN MN A 702 O6 MLI A 703 1555 1555 2.25 LINK MN MN A 702 O HOH A 851 1555 1555 2.31 CISPEP 1 GLN A 267 PRO A 268 0 -2.57 CISPEP 2 TYR A 488 PRO A 489 0 -3.28 SITE 1 AC1 20 HIS A 249 PHE A 253 GLY A 280 GLY A 282 SITE 2 AC1 20 ASP A 315 TYR A 316 ASN A 317 ALA A 320 SITE 3 AC1 20 GLY A 338 ASP A 339 ILE A 340 SER A 365 SITE 4 AC1 20 PHE A 366 LEU A 367 PRO A 372 HOH A 874 SITE 5 AC1 20 HOH A 887 HOH A 940 HOH A 962 HOH A1053 SITE 1 AC2 5 HIS A 369 HIS A 456 GLN A 461 MLI A 703 SITE 2 AC2 5 HOH A 851 SITE 1 AC3 10 TYR A 206 ASN A 241 HIS A 249 HIS A 369 SITE 2 AC3 10 HIS A 456 GLN A 461 MN A 702 GOL A 704 SITE 3 AC3 10 HOH A 807 HOH A 851 SITE 1 AC4 5 HIS A 249 PHE A 452 ARG A 496 MLI A 703 SITE 2 AC4 5 HOH A 807 CRYST1 60.705 88.337 136.755 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016473 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011320 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007312 0.00000