HEADER ANTIMICROBIAL PROTEIN 27-SEP-17 6B4M TITLE STRUCTURAL CHARACTERIZATION OF A NOVEL MONOTREME-SPECIFIC PROTEIN FROM TITLE 2 THE MILK OF THE PLATYPUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: MONOTREME LACTATION PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORNITHORHYNCHUS ANATINUS; SOURCE 3 ORGANISM_COMMON: DUCKBILL PLATYPUS; SOURCE 4 ORGANISM_TAXID: 9258; SOURCE 5 GENE: MLP; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: FREESTYLE-293 KEYWDS MONOTREME, NOVEL-FOLD, ANTIMICROBIAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR T.S.PEAT,J.NEWMAN,J.A.SHARP,A.KUMAR,K.R.NICHOLAS,T.E.ADAMS REVDAT 5 23-OCT-24 6B4M 1 REMARK REVDAT 4 04-OCT-23 6B4M 1 HETSYN REVDAT 3 29-JUL-20 6B4M 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE REVDAT 2 16-MAY-18 6B4M 1 JRNL REVDAT 1 17-JAN-18 6B4M 0 JRNL AUTH J.NEWMAN,J.A.SHARP,A.K.ENJAPOORI,J.BENTLEY,K.R.NICHOLAS, JRNL AUTH 2 T.E.ADAMS,T.S.PEAT JRNL TITL STRUCTURAL CHARACTERIZATION OF A NOVEL MONOTREME-SPECIFIC JRNL TITL 2 PROTEIN WITH ANTIMICROBIAL ACTIVITY FROM THE MILK OF THE JRNL TITL 3 PLATYPUS. JRNL REF ACTA CRYSTALLOGR F STRUCT V. 74 39 2018 JRNL REF 2 BIOL COMMUN JRNL REFN ESSN 2053-230X JRNL PMID 29372906 JRNL DOI 10.1107/S2053230X17017708 REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.40 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.4 REMARK 3 NUMBER OF REFLECTIONS : 27276 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1458 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.57 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1391 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 65.12 REMARK 3 BIN R VALUE (WORKING SET) : 0.2900 REMARK 3 BIN FREE R VALUE SET COUNT : 69 REMARK 3 BIN FREE R VALUE : 0.3710 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5427 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 44 REMARK 3 SOLVENT ATOMS : 87 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.72000 REMARK 3 B22 (A**2) : 0.94000 REMARK 3 B33 (A**2) : -0.28000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.72000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.523 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.260 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.183 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.498 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.945 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.925 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5715 ; 0.014 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5163 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7789 ; 1.497 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11998 ; 1.009 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 707 ; 6.836 ; 5.028 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 255 ;32.683 ;24.235 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 919 ;15.573 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;18.284 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 857 ; 0.087 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6378 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1192 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2796 ; 2.859 ; 3.686 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2795 ; 2.859 ; 3.684 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3509 ; 4.406 ; 5.521 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3510 ; 4.406 ; 5.523 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2919 ; 3.380 ; 3.945 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2919 ; 3.379 ; 3.945 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4281 ; 5.260 ; 5.783 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 24323 ; 8.023 ;68.928 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 24322 ; 8.023 ;68.925 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 19 360 B 19 360 23354 0.07 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6B4M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-SEP-17. REMARK 100 THE DEPOSITION ID IS D_1000230265. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.45860 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28749 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 48.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.6 REMARK 200 DATA REDUNDANCY : 7.600 REMARK 200 R MERGE (I) : 0.11600 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 14.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.64 REMARK 200 COMPLETENESS FOR SHELL (%) : 73.5 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 0.73100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4V00 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.54 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4 MG/ML PROTEIN MIXED WITH AN EQUAL REMARK 280 VOLUME (200 NL) OF RESERVOIR: 100 MM AMMONIUM ACETATE, 100 MM REMARK 280 BIS-TRIS-CHLORIDE, 25.7% PEG 8000 AND INCUBATED AT 8 C, PH 6.8, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 281K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 39.66850 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 LEU A 3 REMARK 465 SER A 4 REMARK 465 LEU A 5 REMARK 465 CYS A 6 REMARK 465 VAL A 7 REMARK 465 LEU A 8 REMARK 465 PHE A 9 REMARK 465 THR A 10 REMARK 465 LEU A 11 REMARK 465 ALA A 12 REMARK 465 SER A 13 REMARK 465 VAL A 14 REMARK 465 VAL A 15 REMARK 465 SER A 16 REMARK 465 GLY A 17 REMARK 465 HIS A 18 REMARK 465 LYS A 362 REMARK 465 ASP A 363 REMARK 465 ASP A 364 REMARK 465 ASP A 365 REMARK 465 LYS A 366 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 LEU B 3 REMARK 465 SER B 4 REMARK 465 LEU B 5 REMARK 465 CYS B 6 REMARK 465 VAL B 7 REMARK 465 LEU B 8 REMARK 465 PHE B 9 REMARK 465 THR B 10 REMARK 465 LEU B 11 REMARK 465 ALA B 12 REMARK 465 SER B 13 REMARK 465 VAL B 14 REMARK 465 VAL B 15 REMARK 465 SER B 16 REMARK 465 GLY B 17 REMARK 465 LYS B 362 REMARK 465 ASP B 363 REMARK 465 ASP B 364 REMARK 465 ASP B 365 REMARK 465 LYS B 366 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS B 18 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OG1 THR B 40 OD1 ASP B 42 2.02 REMARK 500 NZ LYS A 74 OE2 GLU A 198 2.14 REMARK 500 ND2 ASN A 82 C1 NAG A 401 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 332 NE - CZ - NH1 ANGL. DEV. = 3.4 DEGREES REMARK 500 ARG B 332 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 284 36.67 -97.42 REMARK 500 THR B 47 -114.11 -123.40 REMARK 500 LYS B 199 -3.98 -53.52 REMARK 500 PRO B 284 36.26 -96.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 NAG A 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4V00 RELATED DB: PDB REMARK 900 RELATED ID: 4V3J RELATED DB: PDB DBREF1 6B4M A 1 359 UNP A0A088CNJ7_ORNAN DBREF2 6B4M A A0A088CNJ7 1 359 DBREF1 6B4M B 1 359 UNP A0A088CNJ7_ORNAN DBREF2 6B4M B A0A088CNJ7 1 359 SEQADV 6B4M ASP A 360 UNP A0A088CNJ EXPRESSION TAG SEQADV 6B4M TYR A 361 UNP A0A088CNJ EXPRESSION TAG SEQADV 6B4M LYS A 362 UNP A0A088CNJ EXPRESSION TAG SEQADV 6B4M ASP A 363 UNP A0A088CNJ EXPRESSION TAG SEQADV 6B4M ASP A 364 UNP A0A088CNJ EXPRESSION TAG SEQADV 6B4M ASP A 365 UNP A0A088CNJ EXPRESSION TAG SEQADV 6B4M LYS A 366 UNP A0A088CNJ EXPRESSION TAG SEQADV 6B4M ASP B 360 UNP A0A088CNJ EXPRESSION TAG SEQADV 6B4M TYR B 361 UNP A0A088CNJ EXPRESSION TAG SEQADV 6B4M LYS B 362 UNP A0A088CNJ EXPRESSION TAG SEQADV 6B4M ASP B 363 UNP A0A088CNJ EXPRESSION TAG SEQADV 6B4M ASP B 364 UNP A0A088CNJ EXPRESSION TAG SEQADV 6B4M ASP B 365 UNP A0A088CNJ EXPRESSION TAG SEQADV 6B4M LYS B 366 UNP A0A088CNJ EXPRESSION TAG SEQRES 1 A 366 MET ALA LEU SER LEU CYS VAL LEU PHE THR LEU ALA SER SEQRES 2 A 366 VAL VAL SER GLY HIS VAL ALA HIS PRO SER LEU GLY ARG SEQRES 3 A 366 GLY ASP GLY PHE PRO PHE LEU TRP ASP ASN ALA ALA SER SEQRES 4 A 366 THR LEU ASP GLN LEU ASN GLY THR ASP THR THR ILE ILE SEQRES 5 A 366 LEU ASN GLY PHE ASN TYR LEU ASP ARG LEU SER MET PHE SEQRES 6 A 366 LYS THR VAL LEU GLU GLY THR ARG LYS TYR PHE ASP SER SEQRES 7 A 366 PHE ALA PRO ASN ASN THR ALA ASN ILE TYR TRP GLY PHE SEQRES 8 A 366 THR ILE TYR LEU ASN TRP ILE LEU ALA THR GLY ARG SER SEQRES 9 A 366 ALA ASP PRO THR GLY HIS THR THR CYS GLY LEU ALA HIS SEQRES 10 A 366 GLY ASP PRO MET CYS LEU ALA GLU GLU SER TRP TRP ASN SEQRES 11 A 366 CYS ILE LYS TYR ASN PRO ALA ALA ILE ALA PHE PHE ALA SEQRES 12 A 366 ALA LYS LYS ALA GLY ILE PHE GLY ASP VAL THR LYS THR SEQRES 13 A 366 ILE VAL LEU ALA LYS PRO LYS GLU ALA ASN SER PRO TYR SEQRES 14 A 366 CYS SER SER GLU GLU GLU CYS GLN ALA ALA TYR PRO ASP SEQRES 15 A 366 VAL MET ALA THR TYR LEU ASP TYR PHE GLU TYR LEU MET SEQRES 16 A 366 SER LEU GLU LYS THR GLY GLU SER ILE ASP MET ASP LYS SEQRES 17 A 366 ALA GLN GLN LEU LEU TRP LYS ALA HIS VAL THR SER MET SEQRES 18 A 366 GLU ASN SER ILE ALA VAL CYS LYS PRO ARG LEU LYS ASN SEQRES 19 A 366 TYR ASN ILE ILE GLU ARG GLN LEU ASP ARG ASP TYR LEU SEQRES 20 A 366 ILE SER LEU LEU TYR PHE ALA ALA THR ASN PHE PRO THR SEQRES 21 A 366 ASN PHE ILE GLU SER ILE LYS PHE VAL ALA ASP MET PRO SEQRES 22 A 366 HIS ARG GLN LEU ARG PHE GLY ASP ILE ALA PRO PHE ILE SEQRES 23 A 366 PRO ASP MET ASP MET LYS LYS ASN ASN LEU LEU VAL VAL SEQRES 24 A 366 LEU HIS GLY PHE TYR THR VAL HIS SER LEU SER GLY GLY SEQRES 25 A 366 SER SER LEU THR HIS TRP ARG ASN LEU MET GLU SER PRO SEQRES 26 A 366 VAL SER ARG GLU MET ALA ARG ASP MET VAL ASN LEU ILE SEQRES 27 A 366 LEU ALA GLY THR PRO VAL GLU VAL GLN VAL GLU LEU ALA SEQRES 28 A 366 LYS LEU GLY ILE PRO THR PRO VAL ASP TYR LYS ASP ASP SEQRES 29 A 366 ASP LYS SEQRES 1 B 366 MET ALA LEU SER LEU CYS VAL LEU PHE THR LEU ALA SER SEQRES 2 B 366 VAL VAL SER GLY HIS VAL ALA HIS PRO SER LEU GLY ARG SEQRES 3 B 366 GLY ASP GLY PHE PRO PHE LEU TRP ASP ASN ALA ALA SER SEQRES 4 B 366 THR LEU ASP GLN LEU ASN GLY THR ASP THR THR ILE ILE SEQRES 5 B 366 LEU ASN GLY PHE ASN TYR LEU ASP ARG LEU SER MET PHE SEQRES 6 B 366 LYS THR VAL LEU GLU GLY THR ARG LYS TYR PHE ASP SER SEQRES 7 B 366 PHE ALA PRO ASN ASN THR ALA ASN ILE TYR TRP GLY PHE SEQRES 8 B 366 THR ILE TYR LEU ASN TRP ILE LEU ALA THR GLY ARG SER SEQRES 9 B 366 ALA ASP PRO THR GLY HIS THR THR CYS GLY LEU ALA HIS SEQRES 10 B 366 GLY ASP PRO MET CYS LEU ALA GLU GLU SER TRP TRP ASN SEQRES 11 B 366 CYS ILE LYS TYR ASN PRO ALA ALA ILE ALA PHE PHE ALA SEQRES 12 B 366 ALA LYS LYS ALA GLY ILE PHE GLY ASP VAL THR LYS THR SEQRES 13 B 366 ILE VAL LEU ALA LYS PRO LYS GLU ALA ASN SER PRO TYR SEQRES 14 B 366 CYS SER SER GLU GLU GLU CYS GLN ALA ALA TYR PRO ASP SEQRES 15 B 366 VAL MET ALA THR TYR LEU ASP TYR PHE GLU TYR LEU MET SEQRES 16 B 366 SER LEU GLU LYS THR GLY GLU SER ILE ASP MET ASP LYS SEQRES 17 B 366 ALA GLN GLN LEU LEU TRP LYS ALA HIS VAL THR SER MET SEQRES 18 B 366 GLU ASN SER ILE ALA VAL CYS LYS PRO ARG LEU LYS ASN SEQRES 19 B 366 TYR ASN ILE ILE GLU ARG GLN LEU ASP ARG ASP TYR LEU SEQRES 20 B 366 ILE SER LEU LEU TYR PHE ALA ALA THR ASN PHE PRO THR SEQRES 21 B 366 ASN PHE ILE GLU SER ILE LYS PHE VAL ALA ASP MET PRO SEQRES 22 B 366 HIS ARG GLN LEU ARG PHE GLY ASP ILE ALA PRO PHE ILE SEQRES 23 B 366 PRO ASP MET ASP MET LYS LYS ASN ASN LEU LEU VAL VAL SEQRES 24 B 366 LEU HIS GLY PHE TYR THR VAL HIS SER LEU SER GLY GLY SEQRES 25 B 366 SER SER LEU THR HIS TRP ARG ASN LEU MET GLU SER PRO SEQRES 26 B 366 VAL SER ARG GLU MET ALA ARG ASP MET VAL ASN LEU ILE SEQRES 27 B 366 LEU ALA GLY THR PRO VAL GLU VAL GLN VAL GLU LEU ALA SEQRES 28 B 366 LYS LEU GLY ILE PRO THR PRO VAL ASP TYR LYS ASP ASP SEQRES 29 B 366 ASP LYS HET NAG A 401 14 HET IOD A 402 1 HET IOD A 403 1 HET GOL A 404 6 HET NAG B 401 14 HET IOD B 402 1 HET IOD B 403 1 HET GOL B 404 6 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM IOD IODIDE ION HETNAM GOL GLYCEROL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 NAG 2(C8 H15 N O6) FORMUL 4 IOD 4(I 1-) FORMUL 6 GOL 2(C3 H8 O3) FORMUL 11 HOH *87(H2 O) HELIX 1 AA1 LEU A 33 ALA A 37 5 5 HELIX 2 AA2 THR A 40 LEU A 44 5 5 HELIX 3 AA3 ASN A 57 ASP A 77 1 21 HELIX 4 AA4 ALA A 80 THR A 84 5 5 HELIX 5 AA5 TYR A 88 THR A 101 1 14 HELIX 6 AA6 SER A 127 GLY A 148 1 22 HELIX 7 AA7 SER A 172 TYR A 180 1 9 HELIX 8 AA8 TYR A 180 GLY A 201 1 22 HELIX 9 AA9 ASP A 205 LYS A 229 1 25 HELIX 10 AB1 PRO A 230 TYR A 235 5 6 HELIX 11 AB2 ASN A 236 THR A 256 1 21 HELIX 12 AB3 ASN A 261 ASP A 271 1 11 HELIX 13 AB4 ASP A 290 SER A 310 1 21 HELIX 14 AB5 GLY A 312 MET A 322 1 11 HELIX 15 AB6 SER A 324 ALA A 340 1 17 HELIX 16 AB7 GLU A 345 LEU A 353 1 9 HELIX 17 AB8 LEU B 33 ALA B 37 5 5 HELIX 18 AB9 THR B 40 LEU B 44 5 5 HELIX 19 AC1 ASN B 57 THR B 72 1 16 HELIX 20 AC2 THR B 72 ASP B 77 1 6 HELIX 21 AC3 SER B 78 THR B 84 5 7 HELIX 22 AC4 TYR B 88 THR B 101 1 14 HELIX 23 AC5 SER B 127 GLY B 148 1 22 HELIX 24 AC6 SER B 172 TYR B 180 1 9 HELIX 25 AC7 TYR B 180 LEU B 197 1 18 HELIX 26 AC8 ASP B 205 LYS B 229 1 25 HELIX 27 AC9 PRO B 230 TYR B 235 5 6 HELIX 28 AD1 ASN B 236 THR B 256 1 21 HELIX 29 AD2 ASN B 261 ASP B 271 1 11 HELIX 30 AD3 ASP B 290 SER B 310 1 21 HELIX 31 AD4 GLY B 312 MET B 322 1 11 HELIX 32 AD5 SER B 324 ALA B 340 1 17 HELIX 33 AD6 GLU B 345 LEU B 353 1 9 SHEET 1 AA1 3 GLY A 46 THR A 47 0 SHEET 2 AA1 3 THR A 50 LEU A 53 -1 O THR A 50 N THR A 47 SHEET 3 AA1 3 THR A 156 LEU A 159 1 O VAL A 158 N ILE A 51 SHEET 1 AA2 2 THR B 50 LEU B 53 0 SHEET 2 AA2 2 THR B 156 LEU B 159 1 O VAL B 158 N ILE B 51 SSBOND 1 CYS A 113 CYS A 122 1555 1555 2.10 SSBOND 2 CYS A 131 CYS A 228 1555 1555 2.12 SSBOND 3 CYS A 170 CYS A 176 1555 1555 2.04 SSBOND 4 CYS B 113 CYS B 122 1555 1555 2.13 SSBOND 5 CYS B 131 CYS B 228 1555 1555 2.07 SSBOND 6 CYS B 170 CYS B 176 1555 1555 2.03 LINK CE BMET A 291 CE BMET B 291 1555 1555 1.61 LINK NE2AHIS A 317 NE2AHIS B 317 1555 1455 1.31 LINK ND2 ASN B 82 C1 NAG B 401 1555 1555 1.44 CISPEP 1 ALA A 283 PRO A 284 0 5.90 CISPEP 2 ALA B 283 PRO B 284 0 4.66 CRYST1 56.893 79.337 98.373 90.00 92.33 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017577 0.000000 0.000714 0.00000 SCALE2 0.000000 0.012604 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010174 0.00000