HEADER HYDROLASE 29-SEP-17 6B5Y TITLE BETA-LACTAMASE, MIXED WITH CEFTRIAXONE, 30MS TIME POINT, SHARDS TITLE 2 CRYSTAL FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: AMBLER CLASS A BETA-LACTAMASE; COMPND 5 EC: 3.5.2.6; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS (STRAIN ATCC 25618 / SOURCE 3 H37RV); SOURCE 4 ORGANISM_TAXID: 83332; SOURCE 5 STRAIN: ATCC 25618 / H37RV; SOURCE 6 GENE: BLAC, BLAA, RV2068C, MTCY49.07C; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS BETA-LACTAMASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.PANDEY,M.SCHMIDT REVDAT 3 13-MAR-24 6B5Y 1 REMARK REVDAT 2 17-APR-19 6B5Y 1 REMARK REVDAT 1 27-JUN-18 6B5Y 0 JRNL AUTH J.L.OLMOS,S.PANDEY,J.M.MARTIN-GARCIA,G.CALVEY,A.KATZ, JRNL AUTH 2 J.KNOSKA,C.KUPITZ,M.S.HUNTER,M.LIANG,D.OBERTHUER,O.YEFANOV, JRNL AUTH 3 M.WIEDORN,M.HEYMAN,M.HOLL,K.PANDE,A.BARTY,M.D.MILLER, JRNL AUTH 4 S.STERN,S.ROY-CHOWDHURY,J.COE,N.NAGARATNAM,J.ZOOK, JRNL AUTH 5 J.VERBURGT,T.NORWOOD,I.POUDYAL,D.XU,J.KOGLIN,M.H.SEABERG, JRNL AUTH 6 Y.ZHAO,S.BAJT,T.GRANT,V.MARIANI,G.NELSON,G.SUBRAMANIAN, JRNL AUTH 7 E.BAE,R.FROMME,R.FUNG,P.SCHWANDER,M.FRANK,T.A.WHITE, JRNL AUTH 8 U.WEIERSTALL,N.ZATSEPIN,J.SPENCE,P.FROMME,H.N.CHAPMAN, JRNL AUTH 9 L.POLLACK,L.TREMBLAY,A.OURMAZD,G.N.PHILLIPS,M.SCHMIDT JRNL TITL ENZYME INTERMEDIATES CAPTURED "ON THE FLY" BY MIX-AND-INJECT JRNL TITL 2 SERIAL CRYSTALLOGRAPHY. JRNL REF BMC BIOL. V. 16 59 2018 JRNL REFN ESSN 1741-7007 JRNL PMID 29848358 JRNL DOI 10.1186/S12915-018-0524-5 REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.12_2829: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.34 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.1 REMARK 3 NUMBER OF REFLECTIONS : 38561 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.196 REMARK 3 R VALUE (WORKING SET) : 0.193 REMARK 3 FREE R VALUE : 0.251 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.960 REMARK 3 FREE R VALUE TEST SET COUNT : 1913 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.3474 - 6.5474 0.99 2831 132 0.1742 0.2129 REMARK 3 2 6.5474 - 5.2307 0.99 2791 154 0.1911 0.2408 REMARK 3 3 5.2307 - 4.5795 1.00 2781 150 0.1638 0.2076 REMARK 3 4 4.5795 - 4.1654 0.99 2738 147 0.1618 0.2232 REMARK 3 5 4.1654 - 3.8694 0.98 2726 144 0.1823 0.2291 REMARK 3 6 3.8694 - 3.6428 0.96 2674 126 0.1867 0.2443 REMARK 3 7 3.6428 - 3.4615 0.97 2731 119 0.1823 0.2633 REMARK 3 8 3.4615 - 3.3116 0.98 2686 173 0.1947 0.2486 REMARK 3 9 3.3116 - 3.1847 0.98 2700 155 0.2161 0.2786 REMARK 3 10 3.1847 - 3.0752 0.97 2708 136 0.2299 0.3043 REMARK 3 11 3.0752 - 2.9794 0.94 2606 137 0.2483 0.3418 REMARK 3 12 2.9794 - 2.8945 0.88 2438 128 0.2682 0.3697 REMARK 3 13 2.8945 - 2.8186 0.82 2264 89 0.2922 0.4231 REMARK 3 14 2.8186 - 2.7500 0.72 1974 123 0.2882 0.3432 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.380 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.610 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 8272 REMARK 3 ANGLE : 1.721 11308 REMARK 3 CHIRALITY : 0.064 1284 REMARK 3 PLANARITY : 0.008 1504 REMARK 3 DIHEDRAL : 15.095 4924 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6B5Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-OCT-17. REMARK 100 THE DEPOSITION ID IS D_1000230330. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-SEP-16 REMARK 200 TEMPERATURE (KELVIN) : 300 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : FREE ELECTRON LASER REMARK 200 BEAMLINE : CXI REMARK 200 X-RAY GENERATOR MODEL : SLAC LCLS BEAMLINE CXI REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.3 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : CS-PAD CXI-1 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTFEL REMARK 200 DATA SCALING SOFTWARE : CRYSTFEL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38561 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.750 REMARK 200 RESOLUTION RANGE LOW (A) : 19.340 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 526.1 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.81 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 142.0 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM PHOSPHATE, MICROBATCH, REMARK 280 TEMPERATURE 300K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 48.01500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 27 REMARK 465 ALA A 28 REMARK 465 GLY B 27 REMARK 465 ALA B 28 REMARK 465 GLY C 27 REMARK 465 ALA C 28 REMARK 465 GLY D 27 REMARK 465 ALA D 28 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NE2 GLN A 83 O HOH A 401 1.96 REMARK 500 OE1 GLU B 275 O HOH B 501 2.06 REMARK 500 O HOH A 424 O HOH A 427 2.07 REMARK 500 OD1 ASP D 90 O HOH D 501 2.07 REMARK 500 O HOH B 501 O HOH B 505 2.08 REMARK 500 O HOH D 524 O HOH D 529 2.08 REMARK 500 O HOH D 516 O HOH D 522 2.08 REMARK 500 O HOH D 516 O HOH D 528 2.09 REMARK 500 O HOH D 521 O HOH D 531 2.11 REMARK 500 OE1 GLU C 278 O HOH C 401 2.13 REMARK 500 NE ARG D 277 O HOH D 502 2.13 REMARK 500 O ALA C 214 O HOH C 402 2.14 REMARK 500 O SER D 156 O HOH D 503 2.15 REMARK 500 O HOH C 437 O HOH C 440 2.16 REMARK 500 O ASP A 174 NH2 ARG A 244 2.19 REMARK 500 O HOH B 530 O HOH B 531 2.19 REMARK 500 O HOH B 521 O HOH B 524 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 529 O HOH C 427 2656 2.05 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 275 CG GLU A 275 CD 0.099 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 52 -166.36 -113.18 REMARK 500 CYS A 69 -146.21 43.74 REMARK 500 ARG A 222 -119.99 -111.60 REMARK 500 THR B 52 -166.35 -116.22 REMARK 500 CYS B 69 -140.65 42.09 REMARK 500 ARG B 222 -119.85 -110.93 REMARK 500 THR C 52 -169.32 -115.66 REMARK 500 CYS C 69 -143.42 42.80 REMARK 500 ILE C 103 108.56 -57.12 REMARK 500 HIS C 110 20.91 -147.66 REMARK 500 ARG C 222 -120.48 -111.37 REMARK 500 THR D 52 -166.98 -117.49 REMARK 500 CYS D 69 -142.67 42.94 REMARK 500 ARG D 222 -118.30 -111.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP D 29 LEU D 30 146.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 531 DISTANCE = 6.16 ANGSTROMS REMARK 525 HOH C 444 DISTANCE = 6.09 ANGSTROMS REMARK 525 HOH C 445 DISTANCE = 6.13 ANGSTROMS REMARK 525 HOH C 446 DISTANCE = 6.42 ANGSTROMS REMARK 525 HOH C 447 DISTANCE = 6.49 ANGSTROMS REMARK 525 HOH C 448 DISTANCE = 6.60 ANGSTROMS REMARK 525 HOH C 449 DISTANCE = 6.77 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9F2 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9F2 B 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PO4 C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9F2 C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 9F2 D 400 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6B5X RELATED DB: PDB REMARK 900 6B5X CONTAINS SAME PROTIEN FOR UNMIXED DBREF 6B5Y A 27 293 UNP P9WKD3 BLAC_MYCTU 41 307 DBREF 6B5Y B 27 293 UNP P9WKD3 BLAC_MYCTU 41 307 DBREF 6B5Y C 27 293 UNP P9WKD3 BLAC_MYCTU 41 307 DBREF 6B5Y D 27 293 UNP P9WKD3 BLAC_MYCTU 41 307 SEQRES 1 A 267 GLY ALA ASP LEU ALA ASP ARG PHE ALA GLU LEU GLU ARG SEQRES 2 A 267 ARG TYR ASP ALA ARG LEU GLY VAL TYR VAL PRO ALA THR SEQRES 3 A 267 GLY THR THR ALA ALA ILE GLU TYR ARG ALA ASP GLU ARG SEQRES 4 A 267 PHE ALA PHE CYS SER THR PHE LYS ALA PRO LEU VAL ALA SEQRES 5 A 267 ALA VAL LEU HIS GLN ASN PRO LEU THR HIS LEU ASP LYS SEQRES 6 A 267 LEU ILE THR TYR THR SER ASP ASP ILE ARG SER ILE SER SEQRES 7 A 267 PRO VAL ALA GLN GLN HIS VAL GLN THR GLY MET THR ILE SEQRES 8 A 267 GLY GLN LEU CYS ASP ALA ALA ILE ARG TYR SER ASP GLY SEQRES 9 A 267 THR ALA ALA ASN LEU LEU LEU ALA ASP LEU GLY GLY PRO SEQRES 10 A 267 GLY GLY GLY THR ALA ALA PHE THR GLY TYR LEU ARG SER SEQRES 11 A 267 LEU GLY ASP THR VAL SER ARG LEU ASP ALA GLU GLU PRO SEQRES 12 A 267 GLU LEU ASN ARG ASP PRO PRO GLY ASP GLU ARG ASP THR SEQRES 13 A 267 THR THR PRO HIS ALA ILE ALA LEU VAL LEU GLN GLN LEU SEQRES 14 A 267 VAL LEU GLY ASN ALA LEU PRO PRO ASP LYS ARG ALA LEU SEQRES 15 A 267 LEU THR ASP TRP MET ALA ARG ASN THR THR GLY ALA LYS SEQRES 16 A 267 ARG ILE ARG ALA GLY PHE PRO ALA ASP TRP LYS VAL ILE SEQRES 17 A 267 ASP LYS THR GLY THR GLY ASP TYR GLY ARG ALA ASN ASP SEQRES 18 A 267 ILE ALA VAL VAL TRP SER PRO THR GLY VAL PRO TYR VAL SEQRES 19 A 267 VAL ALA VAL MET SER ASP ARG ALA GLY GLY GLY TYR ASP SEQRES 20 A 267 ALA GLU PRO ARG GLU ALA LEU LEU ALA GLU ALA ALA THR SEQRES 21 A 267 CYS VAL ALA GLY VAL LEU ALA SEQRES 1 B 267 GLY ALA ASP LEU ALA ASP ARG PHE ALA GLU LEU GLU ARG SEQRES 2 B 267 ARG TYR ASP ALA ARG LEU GLY VAL TYR VAL PRO ALA THR SEQRES 3 B 267 GLY THR THR ALA ALA ILE GLU TYR ARG ALA ASP GLU ARG SEQRES 4 B 267 PHE ALA PHE CYS SER THR PHE LYS ALA PRO LEU VAL ALA SEQRES 5 B 267 ALA VAL LEU HIS GLN ASN PRO LEU THR HIS LEU ASP LYS SEQRES 6 B 267 LEU ILE THR TYR THR SER ASP ASP ILE ARG SER ILE SER SEQRES 7 B 267 PRO VAL ALA GLN GLN HIS VAL GLN THR GLY MET THR ILE SEQRES 8 B 267 GLY GLN LEU CYS ASP ALA ALA ILE ARG TYR SER ASP GLY SEQRES 9 B 267 THR ALA ALA ASN LEU LEU LEU ALA ASP LEU GLY GLY PRO SEQRES 10 B 267 GLY GLY GLY THR ALA ALA PHE THR GLY TYR LEU ARG SER SEQRES 11 B 267 LEU GLY ASP THR VAL SER ARG LEU ASP ALA GLU GLU PRO SEQRES 12 B 267 GLU LEU ASN ARG ASP PRO PRO GLY ASP GLU ARG ASP THR SEQRES 13 B 267 THR THR PRO HIS ALA ILE ALA LEU VAL LEU GLN GLN LEU SEQRES 14 B 267 VAL LEU GLY ASN ALA LEU PRO PRO ASP LYS ARG ALA LEU SEQRES 15 B 267 LEU THR ASP TRP MET ALA ARG ASN THR THR GLY ALA LYS SEQRES 16 B 267 ARG ILE ARG ALA GLY PHE PRO ALA ASP TRP LYS VAL ILE SEQRES 17 B 267 ASP LYS THR GLY THR GLY ASP TYR GLY ARG ALA ASN ASP SEQRES 18 B 267 ILE ALA VAL VAL TRP SER PRO THR GLY VAL PRO TYR VAL SEQRES 19 B 267 VAL ALA VAL MET SER ASP ARG ALA GLY GLY GLY TYR ASP SEQRES 20 B 267 ALA GLU PRO ARG GLU ALA LEU LEU ALA GLU ALA ALA THR SEQRES 21 B 267 CYS VAL ALA GLY VAL LEU ALA SEQRES 1 C 267 GLY ALA ASP LEU ALA ASP ARG PHE ALA GLU LEU GLU ARG SEQRES 2 C 267 ARG TYR ASP ALA ARG LEU GLY VAL TYR VAL PRO ALA THR SEQRES 3 C 267 GLY THR THR ALA ALA ILE GLU TYR ARG ALA ASP GLU ARG SEQRES 4 C 267 PHE ALA PHE CYS SER THR PHE LYS ALA PRO LEU VAL ALA SEQRES 5 C 267 ALA VAL LEU HIS GLN ASN PRO LEU THR HIS LEU ASP LYS SEQRES 6 C 267 LEU ILE THR TYR THR SER ASP ASP ILE ARG SER ILE SER SEQRES 7 C 267 PRO VAL ALA GLN GLN HIS VAL GLN THR GLY MET THR ILE SEQRES 8 C 267 GLY GLN LEU CYS ASP ALA ALA ILE ARG TYR SER ASP GLY SEQRES 9 C 267 THR ALA ALA ASN LEU LEU LEU ALA ASP LEU GLY GLY PRO SEQRES 10 C 267 GLY GLY GLY THR ALA ALA PHE THR GLY TYR LEU ARG SER SEQRES 11 C 267 LEU GLY ASP THR VAL SER ARG LEU ASP ALA GLU GLU PRO SEQRES 12 C 267 GLU LEU ASN ARG ASP PRO PRO GLY ASP GLU ARG ASP THR SEQRES 13 C 267 THR THR PRO HIS ALA ILE ALA LEU VAL LEU GLN GLN LEU SEQRES 14 C 267 VAL LEU GLY ASN ALA LEU PRO PRO ASP LYS ARG ALA LEU SEQRES 15 C 267 LEU THR ASP TRP MET ALA ARG ASN THR THR GLY ALA LYS SEQRES 16 C 267 ARG ILE ARG ALA GLY PHE PRO ALA ASP TRP LYS VAL ILE SEQRES 17 C 267 ASP LYS THR GLY THR GLY ASP TYR GLY ARG ALA ASN ASP SEQRES 18 C 267 ILE ALA VAL VAL TRP SER PRO THR GLY VAL PRO TYR VAL SEQRES 19 C 267 VAL ALA VAL MET SER ASP ARG ALA GLY GLY GLY TYR ASP SEQRES 20 C 267 ALA GLU PRO ARG GLU ALA LEU LEU ALA GLU ALA ALA THR SEQRES 21 C 267 CYS VAL ALA GLY VAL LEU ALA SEQRES 1 D 267 GLY ALA ASP LEU ALA ASP ARG PHE ALA GLU LEU GLU ARG SEQRES 2 D 267 ARG TYR ASP ALA ARG LEU GLY VAL TYR VAL PRO ALA THR SEQRES 3 D 267 GLY THR THR ALA ALA ILE GLU TYR ARG ALA ASP GLU ARG SEQRES 4 D 267 PHE ALA PHE CYS SER THR PHE LYS ALA PRO LEU VAL ALA SEQRES 5 D 267 ALA VAL LEU HIS GLN ASN PRO LEU THR HIS LEU ASP LYS SEQRES 6 D 267 LEU ILE THR TYR THR SER ASP ASP ILE ARG SER ILE SER SEQRES 7 D 267 PRO VAL ALA GLN GLN HIS VAL GLN THR GLY MET THR ILE SEQRES 8 D 267 GLY GLN LEU CYS ASP ALA ALA ILE ARG TYR SER ASP GLY SEQRES 9 D 267 THR ALA ALA ASN LEU LEU LEU ALA ASP LEU GLY GLY PRO SEQRES 10 D 267 GLY GLY GLY THR ALA ALA PHE THR GLY TYR LEU ARG SER SEQRES 11 D 267 LEU GLY ASP THR VAL SER ARG LEU ASP ALA GLU GLU PRO SEQRES 12 D 267 GLU LEU ASN ARG ASP PRO PRO GLY ASP GLU ARG ASP THR SEQRES 13 D 267 THR THR PRO HIS ALA ILE ALA LEU VAL LEU GLN GLN LEU SEQRES 14 D 267 VAL LEU GLY ASN ALA LEU PRO PRO ASP LYS ARG ALA LEU SEQRES 15 D 267 LEU THR ASP TRP MET ALA ARG ASN THR THR GLY ALA LYS SEQRES 16 D 267 ARG ILE ARG ALA GLY PHE PRO ALA ASP TRP LYS VAL ILE SEQRES 17 D 267 ASP LYS THR GLY THR GLY ASP TYR GLY ARG ALA ASN ASP SEQRES 18 D 267 ILE ALA VAL VAL TRP SER PRO THR GLY VAL PRO TYR VAL SEQRES 19 D 267 VAL ALA VAL MET SER ASP ARG ALA GLY GLY GLY TYR ASP SEQRES 20 D 267 ALA GLU PRO ARG GLU ALA LEU LEU ALA GLU ALA ALA THR SEQRES 21 D 267 CYS VAL ALA GLY VAL LEU ALA HET PO4 A 301 5 HET 9F2 A 302 36 HET 9F2 B 400 36 HET PO4 C 301 5 HET 9F2 C 302 36 HET 9F2 D 400 36 HETNAM PO4 PHOSPHATE ION HETNAM 9F2 CEFTRIAXONE FORMUL 5 PO4 2(O4 P 3-) FORMUL 6 9F2 4(C18 H18 N8 O7 S3) FORMUL 11 HOH *143(H2 O) HELIX 1 AA1 LEU A 30 ASP A 42 1 13 HELIX 2 AA2 CYS A 69 THR A 71 5 3 HELIX 3 AA3 PHE A 72 ASN A 84 1 13 HELIX 4 AA4 PRO A 85 ASP A 90 5 6 HELIX 5 AA5 THR A 96 ILE A 100 5 5 HELIX 6 AA6 VAL A 106 VAL A 111 5 6 HELIX 7 AA7 ILE A 117 TYR A 127 1 11 HELIX 8 AA8 ASP A 129 GLY A 141 1 13 HELIX 9 AA9 GLY A 142 GLY A 145 5 4 HELIX 10 AB1 GLY A 146 LEU A 157 1 12 HELIX 11 AB2 PRO A 169 ARG A 173 5 5 HELIX 12 AB3 THR A 184 LEU A 197 1 14 HELIX 13 AB4 PRO A 202 ARG A 215 1 14 HELIX 14 AB5 ARG A 222 PHE A 227 1 6 HELIX 15 AB6 ARG A 267 GLY A 271 5 5 HELIX 16 AB7 ARG A 277 ALA A 293 1 17 HELIX 17 AB8 LEU B 30 TYR B 41 1 12 HELIX 18 AB9 CYS B 69 THR B 71 5 3 HELIX 19 AC1 PHE B 72 ASN B 84 1 13 HELIX 20 AC2 PRO B 85 ASP B 90 5 6 HELIX 21 AC3 THR B 96 ILE B 100 5 5 HELIX 22 AC4 VAL B 106 HIS B 110 5 5 HELIX 23 AC5 ILE B 117 TYR B 127 1 11 HELIX 24 AC6 ASP B 129 GLY B 141 1 13 HELIX 25 AC7 GLY B 142 GLY B 145 5 4 HELIX 26 AC8 GLY B 146 LEU B 157 1 12 HELIX 27 AC9 PRO B 169 ARG B 173 5 5 HELIX 28 AD1 THR B 184 LEU B 197 1 14 HELIX 29 AD2 PRO B 202 ARG B 215 1 14 HELIX 30 AD3 ARG B 222 PHE B 227 1 6 HELIX 31 AD4 ARG B 267 GLY B 271 5 5 HELIX 32 AD5 ARG B 277 ALA B 293 1 17 HELIX 33 AD6 LEU C 30 ASP C 42 1 13 HELIX 34 AD7 CYS C 69 THR C 71 5 3 HELIX 35 AD8 PHE C 72 ASN C 84 1 13 HELIX 36 AD9 PRO C 85 ASP C 90 5 6 HELIX 37 AE1 THR C 96 ILE C 100 5 5 HELIX 38 AE2 VAL C 106 VAL C 111 5 6 HELIX 39 AE3 ILE C 117 TYR C 127 1 11 HELIX 40 AE4 ASP C 129 GLY C 141 1 13 HELIX 41 AE5 GLY C 142 GLY C 145 5 4 HELIX 42 AE6 GLY C 146 LEU C 157 1 12 HELIX 43 AE7 PRO C 169 ARG C 173 5 5 HELIX 44 AE8 THR C 184 LEU C 197 1 14 HELIX 45 AE9 PRO C 202 ARG C 215 1 14 HELIX 46 AF1 ARG C 222 PHE C 227 1 6 HELIX 47 AF2 ARG C 267 GLY C 271 5 5 HELIX 48 AF3 ARG C 277 ALA C 293 1 17 HELIX 49 AF4 LEU D 30 ASP D 42 1 13 HELIX 50 AF5 CYS D 69 THR D 71 5 3 HELIX 51 AF6 PHE D 72 ASN D 84 1 13 HELIX 52 AF7 PRO D 85 ASP D 90 5 6 HELIX 53 AF8 THR D 96 ILE D 100 5 5 HELIX 54 AF9 VAL D 106 VAL D 111 5 6 HELIX 55 AG1 ILE D 117 TYR D 127 1 11 HELIX 56 AG2 ASP D 129 GLY D 141 1 13 HELIX 57 AG3 GLY D 142 GLY D 145 5 4 HELIX 58 AG4 GLY D 146 LEU D 157 1 12 HELIX 59 AG5 PRO D 169 ARG D 173 5 5 HELIX 60 AG6 THR D 184 LEU D 197 1 14 HELIX 61 AG7 PRO D 202 ARG D 215 1 14 HELIX 62 AG8 ARG D 222 PHE D 227 1 6 HELIX 63 AG9 ARG D 267 GLY D 271 5 5 HELIX 64 AH1 ARG D 277 ALA D 293 1 17 SHEET 1 AA1 5 ILE A 58 TYR A 60 0 SHEET 2 AA1 5 ARG A 44 VAL A 49 -1 N VAL A 47 O TYR A 60 SHEET 3 AA1 5 PRO A 258 ASP A 266 -1 O ALA A 262 N TYR A 48 SHEET 4 AA1 5 ARG A 244 TRP A 252 -1 N VAL A 251 O TYR A 259 SHEET 5 AA1 5 LYS A 232 GLY A 240 -1 N GLY A 238 O ASN A 246 SHEET 1 AA2 2 PHE A 66 ALA A 67 0 SHEET 2 AA2 2 THR A 182 THR A 183 -1 O THR A 183 N PHE A 66 SHEET 1 AA3 2 LEU A 92 ILE A 93 0 SHEET 2 AA3 2 MET A 115 THR A 116 -1 O MET A 115 N ILE A 93 SHEET 1 AA4 5 ILE B 58 TYR B 60 0 SHEET 2 AA4 5 ARG B 44 VAL B 49 -1 N VAL B 47 O TYR B 60 SHEET 3 AA4 5 PRO B 258 ASP B 266 -1 O MET B 264 N GLY B 46 SHEET 4 AA4 5 ARG B 244 TRP B 252 -1 N VAL B 251 O TYR B 259 SHEET 5 AA4 5 LYS B 232 GLY B 240 -1 N GLY B 238 O ASN B 246 SHEET 1 AA5 2 PHE B 66 ALA B 67 0 SHEET 2 AA5 2 THR B 182 THR B 183 -1 O THR B 183 N PHE B 66 SHEET 1 AA6 2 LEU B 92 ILE B 93 0 SHEET 2 AA6 2 MET B 115 THR B 116 -1 O MET B 115 N ILE B 93 SHEET 1 AA7 5 ILE C 58 TYR C 60 0 SHEET 2 AA7 5 ARG C 44 VAL C 49 -1 N VAL C 47 O TYR C 60 SHEET 3 AA7 5 PRO C 258 ASP C 266 -1 O MET C 264 N GLY C 46 SHEET 4 AA7 5 ARG C 244 TRP C 252 -1 N ASP C 247 O VAL C 263 SHEET 5 AA7 5 LYS C 232 GLY C 240 -1 N GLY C 238 O ASN C 246 SHEET 1 AA8 2 PHE C 66 ALA C 67 0 SHEET 2 AA8 2 THR C 182 THR C 183 -1 O THR C 183 N PHE C 66 SHEET 1 AA9 2 LEU C 92 ILE C 93 0 SHEET 2 AA9 2 MET C 115 THR C 116 -1 O MET C 115 N ILE C 93 SHEET 1 AB1 5 ILE D 58 TYR D 60 0 SHEET 2 AB1 5 ARG D 44 VAL D 49 -1 N VAL D 47 O TYR D 60 SHEET 3 AB1 5 PRO D 258 ASP D 266 -1 O MET D 264 N GLY D 46 SHEET 4 AB1 5 ALA D 245 TRP D 252 -1 N VAL D 251 O TYR D 259 SHEET 5 AB1 5 LYS D 232 THR D 239 -1 N GLY D 238 O ASN D 246 SHEET 1 AB2 2 PHE D 66 ALA D 67 0 SHEET 2 AB2 2 THR D 182 THR D 183 -1 O THR D 183 N PHE D 66 SHEET 1 AB3 2 LEU D 92 ILE D 93 0 SHEET 2 AB3 2 MET D 115 THR D 116 -1 O MET D 115 N ILE D 93 CISPEP 1 GLU A 168 PRO A 169 0 1.90 CISPEP 2 GLU B 168 PRO B 169 0 3.61 CISPEP 3 GLU C 168 PRO C 169 0 1.11 CISPEP 4 GLU D 168 PRO D 169 0 2.78 SITE 1 AC1 6 SER A 70 SER A 128 THR A 237 GLY A 238 SITE 2 AC1 6 THR A 239 GLN B 109 SITE 1 AC2 10 ARG A 126 TYR A 127 ARG A 215 ASN A 216 SITE 2 AC2 10 THR A 217 HOH A 415 HOH A 424 THR B 217 SITE 3 AC2 10 ASP B 241 9F2 B 400 SITE 1 AC3 12 GLN A 109 9F2 A 302 CYS B 69 SER B 70 SITE 2 AC3 12 SER B 128 PRO B 169 ASN B 172 LYS B 236 SITE 3 AC3 12 THR B 237 GLY B 238 THR B 239 GLY B 240 SITE 1 AC4 6 SER C 70 SER C 128 THR C 237 GLY C 238 SITE 2 AC4 6 THR C 239 GLN D 109 SITE 1 AC5 8 ARG C 126 TYR C 127 THR C 217 TYR D 127 SITE 2 AC5 8 THR D 217 THR D 218 ASP D 241 9F2 D 400 SITE 1 AC6 14 GLN C 109 9F2 C 302 SER D 70 SER D 128 SITE 2 AC6 14 PRO D 169 ASN D 172 THR D 218 LYS D 236 SITE 3 AC6 14 THR D 237 GLY D 238 THR D 239 GLY D 240 SITE 4 AC6 14 ASP D 241 HOH D 510 CRYST1 78.530 96.030 112.580 90.00 109.68 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012734 0.000000 0.004554 0.00000 SCALE2 0.000000 0.010413 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009434 0.00000