HEADER CELL INVASION 04-OCT-17 6B7Q TITLE CRYSTAL STRUCTURE OF LEGIONELLA EFFECTOR PROTEIN SDEA (LPG2157) AA. TITLE 2 211-910 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SDEA; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEGIONELLA PNEUMOPHILA; SOURCE 3 ORGANISM_TAXID: 446; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS LEGIONELLA, UBIQUITIN, SDED, ADPR-UB, PR-UB, PHOSPHODIESTERASE, MART, KEYWDS 2 CELL INVASION EXPDTA X-RAY DIFFRACTION AUTHOR Y.MAO,A.AKTURK,J.WASILKO REVDAT 6 13-MAR-24 6B7Q 1 LINK REVDAT 5 01-JAN-20 6B7Q 1 REMARK REVDAT 4 20-FEB-19 6B7Q 1 REMARK REVDAT 3 13-JUN-18 6B7Q 1 JRNL REVDAT 2 06-JUN-18 6B7Q 1 JRNL REVDAT 1 18-APR-18 6B7Q 0 JRNL AUTH A.AKTURK,D.J.WASILKO,X.WU,Y.LIU,Y.ZHANG,J.QIU,Z.Q.LUO, JRNL AUTH 2 K.H.REITER,P.S.BRZOVIC,R.E.KLEVIT,Y.MAO JRNL TITL MECHANISM OF PHOSPHORIBOSYL-UBIQUITINATION MEDIATED BY A JRNL TITL 2 SINGLE LEGIONELLA EFFECTOR. JRNL REF NATURE V. 557 729 2018 JRNL REFN ESSN 1476-4687 JRNL PMID 29795346 JRNL DOI 10.1038/S41586-018-0147-6 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 80.51 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.6 REMARK 3 NUMBER OF REFLECTIONS : 41829 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 2111 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2543 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 80.05 REMARK 3 BIN R VALUE (WORKING SET) : 0.2910 REMARK 3 BIN FREE R VALUE SET COUNT : 118 REMARK 3 BIN FREE R VALUE : 0.3440 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5338 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 10 REMARK 3 SOLVENT ATOMS : 170 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.31000 REMARK 3 B22 (A**2) : 0.63000 REMARK 3 B33 (A**2) : -0.85000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.19000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.233 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.198 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.198 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 16.151 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.931 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5447 ; 0.016 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5162 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7358 ; 1.813 ; 1.948 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11887 ; 0.871 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 664 ; 6.605 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 277 ;38.248 ;24.801 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 972 ;16.750 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 33 ;17.047 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 800 ; 0.100 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6219 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1274 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2665 ; 2.466 ; 2.948 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2664 ; 2.464 ; 2.947 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3326 ; 3.938 ; 4.406 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3327 ; 3.937 ; 4.408 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2782 ; 2.632 ; 3.196 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2783 ; 2.632 ; 3.198 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4033 ; 4.287 ; 4.670 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 6509 ; 7.580 ;23.677 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 6463 ; 7.546 ;23.548 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 222 A 904 REMARK 3 ORIGIN FOR THE GROUP (A): 38.5678 6.1323 54.0249 REMARK 3 T TENSOR REMARK 3 T11: 0.4121 T22: 0.0224 REMARK 3 T33: 0.1207 T12: -0.0068 REMARK 3 T13: -0.2177 T23: -0.0038 REMARK 3 L TENSOR REMARK 3 L11: 0.2007 L22: 0.7437 REMARK 3 L33: 0.1354 L12: -0.2684 REMARK 3 L13: -0.1411 L23: 0.1100 REMARK 3 S TENSOR REMARK 3 S11: -0.0545 S12: -0.0110 S13: 0.0429 REMARK 3 S21: 0.0665 S22: 0.0626 S23: -0.0960 REMARK 3 S31: 0.0131 S32: -0.0185 S33: -0.0080 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6B7Q COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-OCT-17. REMARK 100 THE DEPOSITION ID IS D_1000230416. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-MAY-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CHESS REMARK 200 BEAMLINE : F1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9789 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18728 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 80.510 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 3.278 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.9800 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.83 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8,000 9%, 0.1M HEPES PH7.6, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 40.30800 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -201.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 206 REMARK 465 LYS A 207 REMARK 465 ASP A 208 REMARK 465 THR A 209 REMARK 465 SER A 210 REMARK 465 PRO A 211 REMARK 465 LYS A 212 REMARK 465 GLU A 213 REMARK 465 MET A 214 REMARK 465 SER A 215 REMARK 465 VAL A 216 REMARK 465 LYS A 217 REMARK 465 PRO A 218 REMARK 465 THR A 219 REMARK 465 ALA A 220 REMARK 465 PRO A 221 REMARK 465 PRO A 799 REMARK 465 GLU A 800 REMARK 465 ALA A 801 REMARK 465 PHE A 802 REMARK 465 LYS A 803 REMARK 465 GLN A 804 REMARK 465 ILE A 805 REMARK 465 LYS A 806 REMARK 465 GLY A 853 REMARK 465 ARG A 854 REMARK 465 HIS A 855 REMARK 465 GLY A 856 REMARK 465 GLU A 857 REMARK 465 GLY A 858 REMARK 465 THR A 859 REMARK 465 GLU A 860 REMARK 465 PRO A 905 REMARK 465 ARG A 906 REMARK 465 HIS A 907 REMARK 465 GLU A 908 REMARK 465 SER A 909 REMARK 465 GLY A 910 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 251 -66.06 -144.48 REMARK 500 ASP A 339 -163.44 -172.87 REMARK 500 LEU A 370 -108.09 -33.08 REMARK 500 LYS A 375 -47.59 -29.42 REMARK 500 LEU A 473 51.64 37.31 REMARK 500 ILE A 626 -57.86 -123.75 REMARK 500 ASN A 696 49.63 -144.22 REMARK 500 LEU A 793 -53.49 -131.93 REMARK 500 HIS A 848 98.63 -63.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A1003 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 460 OD1 REMARK 620 2 HIS A 535 ND1 71.2 REMARK 620 3 HOH A1206 O 114.0 106.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A1004 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 461 OG REMARK 620 2 HIS A 535 NE2 85.5 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A1008 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 527 OD1 REMARK 620 2 ASP A 617 OD1 87.2 REMARK 620 3 HIS A 666 NE2 88.3 2.7 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A1007 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 617 O REMARK 620 2 HIS A 620 NE2 92.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A1006 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 618 SG REMARK 620 2 LEU A 625 O 96.0 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A1010 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PRO A 677 O REMARK 620 2 ALA A 679 O 86.5 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HG A1005 HG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A1235 O REMARK 620 2 HOH A1267 O 97.0 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG A 1005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG A 1006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG A 1007 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG A 1008 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG A 1009 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue HG A 1010 DBREF 6B7Q A 206 910 UNP Q6RCR0 Q6RCR0_LEGPN 211 915 SEQADV 6B7Q LEU A 370 UNP Q6RCR0 ILE 375 CONFLICT SEQRES 1 A 705 GLY LYS ASP THR SER PRO LYS GLU MET SER VAL LYS PRO SEQRES 2 A 705 THR ALA PRO GLN ASP LYS SER VAL PRO VAL TRP ASN GLY SEQRES 3 A 705 PHE SER LEU TYR THR ASP ASP THR VAL LYS ALA ALA ALA SEQRES 4 A 705 GLN TYR ALA TYR ASP ASN TYR LEU GLY LYS PRO TYR THR SEQRES 5 A 705 GLY SER VAL GLU SER ALA PRO ALA ASN PHE GLY GLY ARG SEQRES 6 A 705 MET VAL TYR ARG GLN HIS HIS GLY LEU SER HIS THR LEU SEQRES 7 A 705 ARG THR MET ALA TYR ALA GLU LEU ILE VAL GLU GLU ALA SEQRES 8 A 705 ARG LYS ALA LYS LEU ARG GLY GLU THR LEU GLY LYS PHE SEQRES 9 A 705 LYS ASP GLY ARG THR ILE ALA ASP VAL THR PRO GLN GLU SEQRES 10 A 705 LEU LYS LYS ILE MET ILE ALA GLN ALA PHE PHE VAL ALA SEQRES 11 A 705 GLY ARG ASP ASP GLU ALA SER ASP ALA LYS ASN TYR GLN SEQRES 12 A 705 LYS TYR HIS GLU GLN SER ARG ASP ALA PHE LEU LYS TYR SEQRES 13 A 705 VAL LYS ASP ASN GLU SER THR LEU LEU PRO ASP VAL PHE SEQRES 14 A 705 LYS ASP GLN GLU ASP VAL ASN PHE TYR ALA ARG VAL ILE SEQRES 15 A 705 GLU ASP LYS SER HIS ASP TRP GLU SER THR PRO ALA HIS SEQRES 16 A 705 VAL LEU ILE ASN GLN GLY HIS MET VAL ASP LEU VAL ARG SEQRES 17 A 705 VAL LYS GLN PRO PRO GLU SER PHE LEU GLN ARG TYR PHE SEQRES 18 A 705 SER SER MET GLN ARG TRP ILE GLY SER GLN ALA THR GLU SEQRES 19 A 705 ALA VAL PHE GLY ILE GLN ARG GLN PHE PHE HIS ALA THR SEQRES 20 A 705 TYR GLU VAL VAL ALA GLY PHE ASP SER ASP ASN LYS GLU SEQRES 21 A 705 PRO HIS LEU VAL VAL SER GLY LEU GLY ARG TYR VAL ILE SEQRES 22 A 705 GLY GLU ASP GLY GLN PRO ILE ARG GLU ALA PRO LYS LYS SEQRES 23 A 705 GLY GLN LYS GLU GLY ASP LEU LYS VAL PHE PRO GLN THR SEQRES 24 A 705 TYR LYS LEU LYS GLU ASN GLU ARG LEU MET ARG VAL ASP SEQRES 25 A 705 GLU PHE LEU LYS LEU PRO GLU ILE GLN ASN THR PHE PRO SEQRES 26 A 705 GLY SER GLY LYS HIS LEU GLN GLY GLY MET PRO GLY MET SEQRES 27 A 705 ASN GLU MET ASP TYR TRP ASN ARG LEU ASN SER LEU ASN SEQRES 28 A 705 ARG ALA ARG CYS GLU ASN ASP VAL ASP PHE CYS LEU LYS SEQRES 29 A 705 GLN LEU GLN THR ALA HIS ASP LYS ALA LYS ILE GLU PRO SEQRES 30 A 705 ILE LYS GLN ALA PHE GLN SER SER LYS GLY LYS GLU ARG SEQRES 31 A 705 ARG GLN PRO ASN VAL ASP GLU ILE ALA ALA ALA ARG ILE SEQRES 32 A 705 ILE GLN GLN ILE LEU ALA ASN PRO ASP CYS ILE HIS ASP SEQRES 33 A 705 ASP HIS VAL LEU ILE ASN GLY GLN LYS LEU GLU GLN GLN SEQRES 34 A 705 PHE PHE ARG ASP LEU LEU ALA LYS CYS GLU MET ALA VAL SEQRES 35 A 705 VAL GLY SER LEU LEU ASN ASP THR ASP ILE GLY ASN ILE SEQRES 36 A 705 ASP THR LEU MET ARG HIS GLU LYS ASP THR GLU PHE HIS SEQRES 37 A 705 SER THR ASN PRO GLU ALA VAL PRO VAL LYS ILE GLY GLU SEQRES 38 A 705 TYR TRP ILE ASN ASP GLN ARG ILE ASN ASN SER SER GLY SEQRES 39 A 705 ASN ILE THR GLN LYS LYS HIS ASP LEU ILE PHE LEU MET SEQRES 40 A 705 GLN ASN ASP ALA TRP TYR PHE SER ARG VAL ASN ALA ILE SEQRES 41 A 705 ALA GLN ASN ARG ASP LYS GLY SER THR PHE LYS GLU VAL SEQRES 42 A 705 LEU ILE THR THR LEU MET THR PRO LEU THR SER LYS ALA SEQRES 43 A 705 LEU VAL ASP THR SER GLN ALA LYS PRO PRO THR ARG LEU SEQRES 44 A 705 PHE ARG GLY LEU ASN LEU SER GLU GLU PHE THR LYS GLY SEQRES 45 A 705 LEU ILE ASP GLN ALA ASN ALA MET ILE ALA ASN THR THR SEQRES 46 A 705 GLU ARG LEU PHE THR ASP HIS SER PRO GLU ALA PHE LYS SEQRES 47 A 705 GLN ILE LYS LEU ASN ASP LEU SER LYS MET SER GLY ARG SEQRES 48 A 705 THR ASN ALA SER THR THR THR GLU ILE LYS LEU VAL LYS SEQRES 49 A 705 GLU THR TRP ASP SER ASN VAL ILE PHE GLU MET LEU ASP SEQRES 50 A 705 PRO ASP GLY LEU LEU HIS SER LYS GLN VAL GLY ARG HIS SEQRES 51 A 705 GLY GLU GLY THR GLU SER GLU PHE SER VAL TYR LEU PRO SEQRES 52 A 705 GLU ASP VAL ALA LEU VAL PRO VAL LYS VAL THR LEU ASP SEQRES 53 A 705 GLY LYS THR GLN LYS GLY GLU ASN ARG TYR VAL PHE THR SEQRES 54 A 705 PHE VAL ALA VAL LYS SER PRO ASP PHE THR PRO ARG HIS SEQRES 55 A 705 GLU SER GLY HET HG A1001 1 HET HG A1002 1 HET HG A1003 1 HET HG A1004 1 HET HG A1005 1 HET HG A1006 1 HET HG A1007 1 HET HG A1008 1 HET HG A1009 1 HET HG A1010 1 HETNAM HG MERCURY (II) ION FORMUL 2 HG 10(HG 2+) FORMUL 12 HOH *170(H2 O) HELIX 1 AA1 ASP A 237 TYR A 251 1 15 HELIX 2 AA2 GLY A 278 ARG A 302 1 25 HELIX 3 AA3 THR A 314 VAL A 318 5 5 HELIX 4 AA4 THR A 319 PHE A 333 1 15 HELIX 5 AA5 ASP A 343 ASP A 364 1 22 HELIX 6 AA6 ASN A 365 PHE A 374 1 10 HELIX 7 AA7 ASP A 376 ASP A 389 1 14 HELIX 8 AA8 LYS A 390 TRP A 394 5 5 HELIX 9 AA9 THR A 397 ASP A 410 1 14 HELIX 10 AB1 LEU A 411 VAL A 414 5 4 HELIX 11 AB2 PRO A 417 GLY A 434 1 18 HELIX 12 AB3 GLY A 434 THR A 452 1 19 HELIX 13 AB4 ARG A 515 LEU A 522 1 8 HELIX 14 AB5 LEU A 522 ASN A 527 1 6 HELIX 15 AB6 ASN A 544 ASN A 553 1 10 HELIX 16 AB7 SER A 554 GLU A 561 1 8 HELIX 17 AB8 ASP A 563 ALA A 586 1 24 HELIX 18 AB9 ASN A 599 ASN A 615 1 17 HELIX 19 AC1 GLU A 632 CYS A 643 1 12 HELIX 20 AC2 GLU A 644 LEU A 651 1 8 HELIX 21 AC3 ASN A 653 GLU A 667 1 15 HELIX 22 AC4 ILE A 684 ASN A 696 1 13 HELIX 23 AC5 ASN A 700 ASP A 715 1 16 HELIX 24 AC6 ASP A 715 GLN A 727 1 13 HELIX 25 AC7 THR A 734 SER A 756 1 23 HELIX 26 AC8 SER A 771 ALA A 787 1 17 HELIX 27 AC9 ASN A 808 ARG A 816 1 9 HELIX 28 AD1 GLU A 824 GLU A 830 1 7 SHEET 1 AA1 2 ALA A 265 PHE A 267 0 SHEET 2 AA1 2 ARG A 270 VAL A 272 -1 O VAL A 272 N ALA A 265 SHEET 1 AA2 2 PHE A 459 ASP A 460 0 SHEET 2 AA2 2 HIS A 535 LEU A 536 -1 O LEU A 536 N PHE A 459 SHEET 1 AA3 3 VAL A 500 PHE A 501 0 SHEET 2 AA3 3 ARG A 475 ILE A 478 -1 N ARG A 475 O PHE A 501 SHEET 3 AA3 3 ARG A 512 LEU A 513 -1 O ARG A 512 N ILE A 478 SHEET 1 AA4 3 ILE A 619 HIS A 620 0 SHEET 2 AA4 3 HIS A 623 LEU A 625 -1 O HIS A 623 N HIS A 620 SHEET 3 AA4 3 LYS A 630 LEU A 631 -1 O LEU A 631 N VAL A 624 SHEET 1 AA5 2 GLU A 671 PHE A 672 0 SHEET 2 AA5 2 VAL A 682 LYS A 683 -1 O VAL A 682 N PHE A 672 SHEET 1 AA6 7 HIS A 848 LYS A 850 0 SHEET 2 AA6 7 GLU A 862 TYR A 866 -1 O TYR A 866 N HIS A 848 SHEET 3 AA6 7 ASN A 818 THR A 822 -1 N ASN A 818 O VAL A 865 SHEET 4 AA6 7 ARG A 763 LEU A 768 -1 N PHE A 765 O THR A 822 SHEET 5 AA6 7 VAL A 836 LEU A 841 -1 O MET A 840 N LEU A 764 SHEET 6 AA6 7 ASN A 889 LYS A 899 1 O PHE A 895 N GLU A 839 SHEET 7 AA6 7 VAL A 871 LYS A 883 -1 N ASP A 881 O ARG A 890 LINK NE2 HIS A 276 HG HG A1001 1555 1555 2.57 LINK NE2 HIS A 407 HG HG A1002 1555 1555 2.43 LINK OD1 ASP A 460 HG HG A1003 1555 1555 3.11 LINK OG SER A 461 HG HG A1004 1555 1555 3.17 LINK OD1 ASN A 527 HG HG A1008 1555 1545 3.00 LINK ND1 HIS A 535 HG HG A1003 1555 1555 2.41 LINK NE2 HIS A 535 HG HG A1004 1555 1555 2.39 LINK O ASP A 617 HG HG A1007 1555 1555 2.95 LINK OD1 ASP A 617 HG HG A1008 1555 1555 2.70 LINK SG CYS A 618 HG HG A1006 1555 1555 2.66 LINK NE2 HIS A 620 HG HG A1007 1555 1555 2.32 LINK O LEU A 625 HG HG A1006 1555 1555 2.46 LINK NE2 HIS A 666 HG HG A1008 1555 1555 2.66 LINK O PRO A 677 HG HG A1010 1555 1555 2.94 LINK O ALA A 679 HG HG A1010 1555 1555 2.66 LINK ND1 HIS A 706 HG HG A1009 1555 1555 2.38 LINK HG HG A1003 O HOH A1206 1555 1555 2.93 LINK HG HG A1005 O HOH A1235 1555 1555 2.83 LINK HG HG A1005 O HOH A1267 1555 1555 2.54 CISPEP 1 GLN A 416 PRO A 417 0 0.15 SITE 1 AC1 3 GLU A 261 GLN A 275 HIS A 276 SITE 1 AC2 2 HIS A 407 MET A 408 SITE 1 AC3 3 ASP A 460 HIS A 535 HOH A1206 SITE 1 AC4 4 SER A 461 ASP A 462 GLY A 533 HIS A 535 SITE 1 AC5 4 LEU A 639 CYS A 643 HOH A1235 HOH A1267 SITE 1 AC6 2 CYS A 618 LEU A 625 SITE 1 AC7 2 ASP A 617 HIS A 620 SITE 1 AC8 3 ASN A 527 ASP A 617 HIS A 666 SITE 1 AC9 1 HIS A 706 SITE 1 AD1 4 HIS A 673 PRO A 677 ALA A 679 PRO A 681 CRYST1 69.806 80.616 85.612 90.00 109.87 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014325 0.000000 0.005178 0.00000 SCALE2 0.000000 0.012404 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012420 0.00000