HEADER TRANSFERASE/TRANSFERASE INHIBITOR 08-OCT-17 6B8J TITLE CO-STRUCTURE OF HUMAN GLYCOGEN SYNTHASE KINASE BETA WITH A SELECTIVE TITLE 2 (5-IMIDAZOL-2-YL-4-PHENYLPYRIMIDIN-2-YL)[2-(2-PYRIDYLAMINO) TITLE 3 ETHYL]AMINE INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLYCOGEN SYNTHASE KINASE-3 BETA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GSK-3 BETA,SERINE/THREONINE-PROTEIN KINASE GSK3B; COMPND 5 EC: 2.7.11.26,2.7.11.1; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: VAL-SEP-ARG-ARG; COMPND 9 CHAIN: C; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GSK3B; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 11 ORGANISM_TAXID: 9606 KEYWDS KINASE, TRANSFERASE, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.E.BUSSIERE REVDAT 2 20-NOV-24 6B8J 1 REMARK REVDAT 1 08-NOV-17 6B8J 0 JRNL AUTH A.S.WAGMAN,R.S.BOYCE,S.P.BROWN,E.FANG,D.GOFF,J.M.JANSEN, JRNL AUTH 2 V.P.LE,B.H.LEVINE,S.C.NG,Z.J.NI,J.M.NUSS,K.B.PFISTER, JRNL AUTH 3 S.RAMURTHY,P.A.RENHOWE,D.B.RING,W.SHU,S.SUBRAMANIAN, JRNL AUTH 4 X.A.ZHOU,C.M.SHAFER,S.D.HARRISON,K.W.JOHNSON,D.E.BUSSIERE JRNL TITL SYNTHESIS, BINDING MODE, AND ANTIHYPERGLYCEMIC ACTIVITY OF JRNL TITL 2 POTENT AND SELECTIVE JRNL TITL 3 (5-IMIDAZOL-2-YL-4-PHENYLPYRIMIDIN-2-YL)[2-(2-PYRIDYLAMINO) JRNL TITL 4 ETHYL]AMINE INHIBITORS OF GLYCOGEN SYNTHASE KINASE 3. JRNL REF J. MED. CHEM. V. 60 8482 2017 JRNL REFN ISSN 1520-4804 JRNL PMID 29016121 JRNL DOI 10.1021/ACS.JMEDCHEM.7B00922 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 12125 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.216 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 2.6980 - 2.5950 0.00 0 0 0.2605 0.3037 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : NULL NULL REMARK 3 ANGLE : NULL NULL REMARK 3 CHIRALITY : NULL NULL REMARK 3 PLANARITY : NULL NULL REMARK 3 DIHEDRAL : NULL NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6B8J COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-OCT-17. REMARK 100 THE DEPOSITION ID IS D_1000230451. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JAN-01 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS II REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12763 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.595 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 7-12% (W:V) PEG 6000 AND 5-8% MPD REMARK 280 (V:V), VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 32.53500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 810 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -9.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLY A 3 REMARK 465 ARG A 4 REMARK 465 PRO A 5 REMARK 465 ARG A 6 REMARK 465 THR A 7 REMARK 465 THR A 8 REMARK 465 SER A 9 REMARK 465 PHE A 10 REMARK 465 ALA A 11 REMARK 465 GLU A 12 REMARK 465 SER A 13 REMARK 465 CYS A 14 REMARK 465 LYS A 15 REMARK 465 PRO A 16 REMARK 465 VAL A 17 REMARK 465 GLN A 18 REMARK 465 GLN A 19 REMARK 465 PRO A 20 REMARK 465 SER A 21 REMARK 465 ALA A 22 REMARK 465 PHE A 23 REMARK 465 GLY A 24 REMARK 465 SER A 25 REMARK 465 MET A 26 REMARK 465 LYS A 27 REMARK 465 VAL A 28 REMARK 465 SER A 29 REMARK 465 ARG A 30 REMARK 465 ASP A 31 REMARK 465 LYS A 32 REMARK 465 ASP A 33 REMARK 465 GLY A 34 REMARK 465 SER A 35 REMARK 465 LYS A 36 REMARK 465 GLU A 121 REMARK 465 LYS A 122 REMARK 465 LYS A 123 REMARK 465 GLN A 385 REMARK 465 ALA A 386 REMARK 465 ALA A 387 REMARK 465 ALA A 388 REMARK 465 SER A 389 REMARK 465 THR A 390 REMARK 465 PRO A 391 REMARK 465 THR A 392 REMARK 465 ASN A 393 REMARK 465 ALA A 394 REMARK 465 THR A 395 REMARK 465 ALA A 396 REMARK 465 ALA A 397 REMARK 465 SER A 398 REMARK 465 ASP A 399 REMARK 465 ALA A 400 REMARK 465 ASN A 401 REMARK 465 THR A 402 REMARK 465 GLY A 403 REMARK 465 ASP A 404 REMARK 465 ARG A 405 REMARK 465 GLY A 406 REMARK 465 GLN A 407 REMARK 465 THR A 408 REMARK 465 ASN A 409 REMARK 465 ASN A 410 REMARK 465 ALA A 411 REMARK 465 ALA A 412 REMARK 465 SER A 413 REMARK 465 ALA A 414 REMARK 465 SER A 415 REMARK 465 ALA A 416 REMARK 465 SER A 417 REMARK 465 ASN A 418 REMARK 465 SER A 419 REMARK 465 THR A 420 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 49 CG OD1 OD2 REMARK 470 ARG A 50 CG CD NE CZ NH1 NH2 REMARK 470 GLN A 89 CG CD OE1 NE2 REMARK 470 ARG A 92 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 211 CG CD OE1 OE2 REMARK 470 ARG A 282 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 297 CG CD CE NZ REMARK 470 ARG C 3 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 205 OD1 ASN A 213 1.88 REMARK 500 OG1 THR A 43 O PHE A 115 1.92 REMARK 500 OE2 GLU A 226 NH2 ARG A 328 2.00 REMARK 500 O HOH A 646 O HOH A 718 2.03 REMARK 500 O LEU A 153 O HOH A 601 2.04 REMARK 500 O ALA A 170 O HOH A 602 2.06 REMARK 500 O HOH A 620 O HOH A 758 2.10 REMARK 500 OE1 GLU A 312 O HOH A 603 2.10 REMARK 500 O ARG A 92 N ARG C 4 2.11 REMARK 500 O PRO A 372 O HOH A 604 2.12 REMARK 500 O HOH A 750 O HOH A 783 2.15 REMARK 500 NH1 ARG A 180 O2P SEP C 2 2.16 REMARK 500 OH TYR A 117 O HOH A 605 2.16 REMARK 500 O HOH A 714 O HOH A 788 2.16 REMARK 500 OD1 ASN A 186 O HOH A 606 2.17 REMARK 500 NZ LYS A 349 OD1 ASP A 355 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ARG C 4 N ARG C 4 CA 0.752 REMARK 500 ARG C 4 CA ARG C 4 CB -0.285 REMARK 500 ARG C 4 CA ARG C 4 C 0.757 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PHE A 291 C - N - CA ANGL. DEV. = 15.9 DEGREES REMARK 500 ARG C 4 C - N - CA ANGL. DEV. = -22.0 DEGREES REMARK 500 ARG C 4 CB - CA - C ANGL. DEV. = 29.3 DEGREES REMARK 500 ARG C 4 N - CA - CB ANGL. DEV. = 23.6 DEGREES REMARK 500 ARG C 4 CA - CB - CG ANGL. DEV. = -19.5 DEGREES REMARK 500 ARG C 4 CB - CG - CD ANGL. DEV. = -16.6 DEGREES REMARK 500 ARG C 4 N - CA - C ANGL. DEV. = -39.0 DEGREES REMARK 500 ARG C 4 CA - C - O ANGL. DEV. = 28.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 48 -155.68 -90.95 REMARK 500 ASP A 49 79.93 -118.52 REMARK 500 LEU A 88 156.42 169.47 REMARK 500 LYS A 91 -165.48 26.37 REMARK 500 GLN A 99 -20.30 82.72 REMARK 500 ASP A 181 50.94 -154.10 REMARK 500 ASP A 200 72.80 56.86 REMARK 500 CYS A 218 121.62 61.94 REMARK 500 CYS A 218 116.74 69.29 REMARK 500 SER A 219 137.94 -38.51 REMARK 500 THR A 289 -82.39 -128.93 REMARK 500 PHE A 293 129.45 69.65 REMARK 500 ASN A 347 48.15 -95.24 REMARK 500 ASN A 370 80.52 -169.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LEU A 88 GLN A 89 65.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 LYS A 91 11.22 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 791 DISTANCE = 5.85 ANGSTROMS REMARK 525 HOH A 792 DISTANCE = 5.90 ANGSTROMS REMARK 525 HOH A 793 DISTANCE = 6.28 ANGSTROMS REMARK 525 HOH A 794 DISTANCE = 6.46 ANGSTROMS REMARK 525 HOH A 795 DISTANCE = 6.63 ANGSTROMS REMARK 525 HOH A 796 DISTANCE = 6.95 ANGSTROMS REMARK 525 HOH A 797 DISTANCE = 7.04 ANGSTROMS REMARK 525 HOH A 798 DISTANCE = 7.41 ANGSTROMS REMARK 525 HOH A 799 DISTANCE = 8.04 ANGSTROMS REMARK 525 HOH A 800 DISTANCE = 8.22 ANGSTROMS REMARK 525 HOH A 801 DISTANCE = 14.69 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 65C A 502 DBREF 6B8J A 1 420 UNP P49841 GSK3B_HUMAN 1 420 DBREF 6B8J C 1 4 PDB 6B8J 6B8J 1 4 SEQRES 1 A 420 MET SER GLY ARG PRO ARG THR THR SER PHE ALA GLU SER SEQRES 2 A 420 CYS LYS PRO VAL GLN GLN PRO SER ALA PHE GLY SER MET SEQRES 3 A 420 LYS VAL SER ARG ASP LYS ASP GLY SER LYS VAL THR THR SEQRES 4 A 420 VAL VAL ALA THR PRO GLY GLN GLY PRO ASP ARG PRO GLN SEQRES 5 A 420 GLU VAL SER TYR THR ASP THR LYS VAL ILE GLY ASN GLY SEQRES 6 A 420 SER PHE GLY VAL VAL TYR GLN ALA LYS LEU CYS ASP SER SEQRES 7 A 420 GLY GLU LEU VAL ALA ILE LYS LYS VAL LEU GLN ASP LYS SEQRES 8 A 420 ARG PHE LYS ASN ARG GLU LEU GLN ILE MET ARG LYS LEU SEQRES 9 A 420 ASP HIS CYS ASN ILE VAL ARG LEU ARG TYR PHE PHE TYR SEQRES 10 A 420 SER SER GLY GLU LYS LYS ASP GLU VAL TYR LEU ASN LEU SEQRES 11 A 420 VAL LEU ASP TYR VAL PRO GLU THR VAL TYR ARG VAL ALA SEQRES 12 A 420 ARG HIS TYR SER ARG ALA LYS GLN THR LEU PRO VAL ILE SEQRES 13 A 420 TYR VAL LYS LEU TYR MET TYR GLN LEU PHE ARG SER LEU SEQRES 14 A 420 ALA TYR ILE HIS SER PHE GLY ILE CYS HIS ARG ASP ILE SEQRES 15 A 420 LYS PRO GLN ASN LEU LEU LEU ASP PRO ASP THR ALA VAL SEQRES 16 A 420 LEU LYS LEU CYS ASP PHE GLY SER ALA LYS GLN LEU VAL SEQRES 17 A 420 ARG GLY GLU PRO ASN VAL SER PTR ILE CYS SER ARG TYR SEQRES 18 A 420 TYR ARG ALA PRO GLU LEU ILE PHE GLY ALA THR ASP TYR SEQRES 19 A 420 THR SER SER ILE ASP VAL TRP SER ALA GLY CYS VAL LEU SEQRES 20 A 420 ALA GLU LEU LEU LEU GLY GLN PRO ILE PHE PRO GLY ASP SEQRES 21 A 420 SER GLY VAL ASP GLN LEU VAL GLU ILE ILE LYS VAL LEU SEQRES 22 A 420 GLY THR PRO THR ARG GLU GLN ILE ARG GLU MET ASN PRO SEQRES 23 A 420 ASN TYR THR GLU PHE LYS PHE PRO GLN ILE LYS ALA HIS SEQRES 24 A 420 PRO TRP THR LYS VAL PHE ARG PRO ARG THR PRO PRO GLU SEQRES 25 A 420 ALA ILE ALA LEU CYS SER ARG LEU LEU GLU TYR THR PRO SEQRES 26 A 420 THR ALA ARG LEU THR PRO LEU GLU ALA CYS ALA HIS SER SEQRES 27 A 420 PHE PHE ASP GLU LEU ARG ASP PRO ASN VAL LYS LEU PRO SEQRES 28 A 420 ASN GLY ARG ASP THR PRO ALA LEU PHE ASN PHE THR THR SEQRES 29 A 420 GLN GLU LEU SER SER ASN PRO PRO LEU ALA THR ILE LEU SEQRES 30 A 420 ILE PRO PRO HIS ALA ARG ILE GLN ALA ALA ALA SER THR SEQRES 31 A 420 PRO THR ASN ALA THR ALA ALA SER ASP ALA ASN THR GLY SEQRES 32 A 420 ASP ARG GLY GLN THR ASN ASN ALA ALA SER ALA SER ALA SEQRES 33 A 420 SER ASN SER THR SEQRES 1 C 4 VAL SEP ARG ARG MODRES 6B8J PTR A 216 TYR MODIFIED RESIDUE HET PTR A 216 16 HET SEP C 2 10 HET GOL A 501 6 HET 65C A 502 32 HETNAM PTR O-PHOSPHOTYROSINE HETNAM SEP PHOSPHOSERINE HETNAM GOL GLYCEROL HETNAM 65C CHIR99021 HETSYN PTR PHOSPHONOTYROSINE HETSYN SEP PHOSPHONOSERINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN 65C 6-[(2-{[4-(2,4-DICHLOROPHENYL)-5-(4-METHYL-1H-IMIDAZOL- HETSYN 2 65C 2-YL)PYRIMIDIN-2-YL]AMINO}ETHYL)AMINO]PYRIDINE-3- HETSYN 3 65C CARBONITRILE FORMUL 1 PTR C9 H12 N O6 P FORMUL 2 SEP C3 H8 N O6 P FORMUL 3 GOL C3 H8 O3 FORMUL 4 65C C22 H18 CL2 N8 FORMUL 5 HOH *203(H2 O) HELIX 1 AA1 ARG A 96 MET A 101 1 6 HELIX 2 AA2 VAL A 139 ALA A 149 1 11 HELIX 3 AA3 PRO A 154 PHE A 175 1 22 HELIX 4 AA4 LYS A 183 GLN A 185 5 3 HELIX 5 AA5 SER A 219 ARG A 223 5 5 HELIX 6 AA6 ALA A 224 PHE A 229 1 6 HELIX 7 AA7 SER A 236 GLY A 253 1 18 HELIX 8 AA8 SER A 261 GLY A 274 1 14 HELIX 9 AA9 GLU A 279 ASN A 285 1 7 HELIX 10 AB1 PRO A 300 PHE A 305 1 6 HELIX 11 AB2 PRO A 310 ARG A 319 1 10 HELIX 12 AB3 THR A 324 ARG A 328 5 5 HELIX 13 AB4 THR A 330 ALA A 336 1 7 HELIX 14 AB5 HIS A 337 ASP A 345 5 9 HELIX 15 AB6 ASN A 370 PRO A 372 5 3 HELIX 16 AB7 LEU A 373 ILE A 378 1 6 HELIX 17 AB8 PRO A 379 ARG A 383 5 5 SHEET 1 AA1 6 THR A 39 THR A 43 0 SHEET 2 AA1 6 GLN A 52 GLY A 65 -1 O TYR A 56 N THR A 39 SHEET 3 AA1 6 GLY A 68 LEU A 75 -1 O VAL A 70 N ILE A 62 SHEET 4 AA1 6 LEU A 81 VAL A 87 -1 O LYS A 86 N VAL A 69 SHEET 5 AA1 6 LEU A 128 ASP A 133 -1 O LEU A 132 N ALA A 83 SHEET 6 AA1 6 LEU A 112 PHE A 115 -1 N TYR A 114 O VAL A 131 SHEET 1 AA2 3 GLU A 137 THR A 138 0 SHEET 2 AA2 3 LEU A 187 ASP A 190 -1 O LEU A 189 N GLU A 137 SHEET 3 AA2 3 VAL A 195 LEU A 198 -1 O LYS A 197 N LEU A 188 SHEET 1 AA3 2 ILE A 177 CYS A 178 0 SHEET 2 AA3 2 LYS A 205 GLN A 206 -1 O LYS A 205 N CYS A 178 LINK C SER A 215 N PTR A 216 1555 1555 1.33 LINK C PTR A 216 N ILE A 217 1555 1555 1.33 LINK C VAL C 1 N SEP C 2 1555 1555 1.33 LINK C SEP C 2 N ARG C 3 1555 1555 1.33 CISPEP 1 ARG A 278 GLU A 279 0 14.63 SITE 1 AC1 1 SER A 174 SITE 1 AC2 17 ILE A 62 GLY A 63 ASN A 64 PHE A 67 SITE 2 AC2 17 VAL A 70 ALA A 83 LEU A 132 ASP A 133 SITE 3 AC2 17 TYR A 134 VAL A 135 ARG A 141 GLN A 185 SITE 4 AC2 17 LEU A 188 HOH A 633 HOH A 635 HOH A 643 SITE 5 AC2 17 HOH A 652 CRYST1 56.747 65.070 57.336 90.00 100.53 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017622 0.000000 0.003276 0.00000 SCALE2 0.000000 0.015368 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017740 0.00000