HEADER SIGNALING PROTEIN 11-OCT-17 6B9X TITLE CRYSTAL STRUCTURE OF RAGULATOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: RAGULATOR COMPLEX PROTEIN LAMTOR1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: LATE ENDOSOMAL/LYSOSOMAL ADAPTOR AND MAPK AND MTOR ACTIVATOR COMPND 5 1,LIPID RAFT ADAPTOR PROTEIN P18,PROTEIN ASSOCIATED WITH DRMS AND COMPND 6 ENDOSOMES,P27KIP1-RELEASING FACTOR FROM RHOA,P27RF-RHO; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: RAGULATOR COMPLEX PROTEIN LAMTOR2; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: ENDOSOMAL ADAPTOR PROTEIN P14,LATE ENDOSOMAL/LYSOSOMAL MP1- COMPND 12 INTERACTING PROTEIN,LATE ENDOSOMAL/LYSOSOMAL ADAPTOR AND MAPK AND COMPND 13 MTOR ACTIVATOR 2,MITOGEN-ACTIVATED PROTEIN-BINDING PROTEIN- COMPND 14 INTERACTING PROTEIN,MAPBP-INTERACTING PROTEIN,ROADBLOCK DOMAIN- COMPND 15 CONTAINING PROTEIN 3; COMPND 16 ENGINEERED: YES; COMPND 17 MOL_ID: 3; COMPND 18 MOLECULE: RAGULATOR COMPLEX PROTEIN LAMTOR3; COMPND 19 CHAIN: C; COMPND 20 SYNONYM: LATE ENDOSOMAL/LYSOSOMAL ADAPTOR AND MAPK AND MTOR ACTIVATOR COMPND 21 3,MEK-BINDING PARTNER 1,MP1,MITOGEN-ACTIVATED PROTEIN KINASE KINASE COMPND 22 1-INTERACTING PROTEIN 1,MITOGEN-ACTIVATED PROTEIN KINASE SCAFFOLD COMPND 23 PROTEIN 1; COMPND 24 ENGINEERED: YES; COMPND 25 MOL_ID: 4; COMPND 26 MOLECULE: RAGULATOR COMPLEX PROTEIN LAMTOR4; COMPND 27 CHAIN: D; COMPND 28 SYNONYM: LATE ENDOSOMAL/LYSOSOMAL ADAPTOR AND MAPK AND MTOR ACTIVATOR COMPND 29 4; COMPND 30 ENGINEERED: YES; COMPND 31 MOL_ID: 5; COMPND 32 MOLECULE: HEPATITIS B VIRUS X INTERACTING PROTEIN; COMPND 33 CHAIN: E; COMPND 34 SYNONYM: RAGULATOR COMPLEX PROTEIN LAMTOR5; COMPND 35 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: LAMTOR1, C11ORF59, PDRO, PP7157; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 12 ORGANISM_COMMON: HUMAN; SOURCE 13 ORGANISM_TAXID: 9606; SOURCE 14 GENE: LAMTOR2, MAPBPIP, ROBLD3, HSPC003; SOURCE 15 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 16 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 19 MOL_ID: 3; SOURCE 20 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 21 ORGANISM_COMMON: HUMAN; SOURCE 22 ORGANISM_TAXID: 9606; SOURCE 23 GENE: LAMTOR3, MAP2K1IP1, MAPKSP1, PRO2783; SOURCE 24 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 25 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 26 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 27 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 28 MOL_ID: 4; SOURCE 29 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 30 ORGANISM_COMMON: HUMAN; SOURCE 31 ORGANISM_TAXID: 9606; SOURCE 32 GENE: LAMTOR4, C7ORF59; SOURCE 33 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 34 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 35 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 36 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 37 MOL_ID: 5; SOURCE 38 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 39 ORGANISM_COMMON: HUMAN; SOURCE 40 ORGANISM_TAXID: 9606; SOURCE 41 GENE: LAMTOR5, HBXIP, HCG_40252; SOURCE 42 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 43 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 44 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 45 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS RAGULATOR, LAMTOR, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.-Y.SU,J.H.HURLEY REVDAT 5 04-OCT-23 6B9X 1 REMARK REVDAT 4 16-MAR-22 6B9X 1 REMARK REVDAT 3 20-DEC-17 6B9X 1 JRNL REVDAT 2 22-NOV-17 6B9X 1 JRNL REVDAT 1 08-NOV-17 6B9X 0 JRNL AUTH M.Y.SU,K.L.MORRIS,D.J.KIM,Y.FU,R.LAWRENCE,G.STJEPANOVIC, JRNL AUTH 2 R.ZONCU,J.H.HURLEY JRNL TITL HYBRID STRUCTURE OF THE RAGA/C-RAGULATOR MTORC1 ACTIVATION JRNL TITL 2 COMPLEX. JRNL REF MOL. CELL V. 68 835 2017 JRNL REFN ISSN 1097-4164 JRNL PMID 29107538 JRNL DOI 10.1016/J.MOLCEL.2017.10.016 REMARK 2 REMARK 2 RESOLUTION. 1.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.42 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 146.10 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 86.8 REMARK 3 NUMBER OF REFLECTIONS : 135926 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.237 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.300 REMARK 3 FREE R VALUE TEST SET COUNT : 1860 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.43 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 583 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 5.06 REMARK 3 BIN R VALUE (WORKING SET) : 0.9550 REMARK 3 BIN FREE R VALUE SET COUNT : 9 REMARK 3 BIN FREE R VALUE : 0.9760 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3707 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 290 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.09000 REMARK 3 B22 (A**2) : 0.09000 REMARK 3 B33 (A**2) : -0.28000 REMARK 3 B12 (A**2) : 0.04000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.058 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.061 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.944 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3761 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3578 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5100 ; 1.365 ; 1.974 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8303 ; 3.581 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 483 ; 5.383 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 156 ;39.603 ;25.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 652 ;12.555 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 20 ;14.641 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 611 ; 0.081 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4166 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 694 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1947 ; 1.887 ; 3.103 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1946 ; 1.887 ; 3.102 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2425 ; 2.626 ; 4.635 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2426 ; 2.626 ; 4.636 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1814 ; 2.782 ; 3.463 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1814 ; 2.782 ; 3.463 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2676 ; 4.042 ; 5.076 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4217 ; 4.757 ;39.053 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4137 ; 4.721 ;38.672 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6B9X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-OCT-17. REMARK 100 THE DEPOSITION ID IS D_1000230515. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-AUG-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.3.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.12 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 271960 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.425 REMARK 200 RESOLUTION RANGE LOW (A) : 146.103 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.6 REMARK 200 DATA REDUNDANCY : 9.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.1200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1VET, 3MS6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M CHES PH 9.0, 40% PEG 600, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 17.44167 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 34.88333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 26.16250 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 43.60417 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 8.72083 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: PENTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: PENTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12280 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20780 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -86.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 CYS A 3 REMARK 465 CYS A 4 REMARK 465 TYR A 5 REMARK 465 SER A 6 REMARK 465 SER A 7 REMARK 465 GLU A 8 REMARK 465 ASN A 9 REMARK 465 GLU A 10 REMARK 465 ASP A 11 REMARK 465 SER A 12 REMARK 465 ASP A 13 REMARK 465 GLN A 14 REMARK 465 ASP A 15 REMARK 465 ARG A 16 REMARK 465 GLU A 17 REMARK 465 GLU A 18 REMARK 465 ARG A 19 REMARK 465 LYS A 20 REMARK 465 LEU A 21 REMARK 465 LEU A 22 REMARK 465 LEU A 23 REMARK 465 ASP A 24 REMARK 465 PRO A 25 REMARK 465 SER A 26 REMARK 465 SER A 27 REMARK 465 PRO A 28 REMARK 465 PRO A 29 REMARK 465 THR A 30 REMARK 465 LYS A 31 REMARK 465 ALA A 32 REMARK 465 LEU A 33 REMARK 465 ASN A 34 REMARK 465 GLY A 35 REMARK 465 ALA A 36 REMARK 465 GLU A 37 REMARK 465 PRO A 38 REMARK 465 ASN A 39 REMARK 465 TYR A 40 REMARK 465 HIS A 41 REMARK 465 SER A 42 REMARK 465 LEU A 43 REMARK 465 PRO A 44 REMARK 465 SER A 45 REMARK 465 ALA A 46 REMARK 465 ARG A 47 REMARK 465 THR A 48 REMARK 465 ASP A 49 REMARK 465 GLU A 50 REMARK 465 GLN A 51 REMARK 465 ALA A 52 REMARK 465 LEU A 53 REMARK 465 LEU A 54 REMARK 465 SER A 55 REMARK 465 SER A 56 REMARK 465 ILE A 57 REMARK 465 LEU A 58 REMARK 465 ALA A 59 REMARK 465 LYS A 60 REMARK 465 THR A 61 REMARK 465 ALA A 62 REMARK 465 SER A 63 REMARK 465 ASN A 64 REMARK 465 ILE A 65 REMARK 465 ILE A 66 REMARK 465 ASP A 67 REMARK 465 VAL A 68 REMARK 465 SER A 69 REMARK 465 ALA A 70 REMARK 465 ALA A 71 REMARK 465 ASP A 72 REMARK 465 SER A 73 REMARK 465 GLN A 74 REMARK 465 GLY A 75 REMARK 465 MET A 76 REMARK 465 GLU A 77 REMARK 465 GLN A 78 REMARK 465 HIS A 79 REMARK 465 GLU A 80 REMARK 465 TYR A 81 REMARK 465 MET A 82 REMARK 465 ASP A 83 REMARK 465 ARG A 84 REMARK 465 ALA A 85 REMARK 465 ARG A 86 REMARK 465 GLN A 87 REMARK 465 TYR A 88 REMARK 465 SER A 89 REMARK 465 THR A 90 REMARK 465 ARG A 91 REMARK 465 LEU A 92 REMARK 465 ALA A 93 REMARK 465 VAL A 94 REMARK 465 LEU A 95 REMARK 465 SER A 96 REMARK 465 GLN A 157 REMARK 465 PHE A 158 REMARK 465 GLY A 159 REMARK 465 ILE A 160 REMARK 465 PRO A 161 REMARK 465 MET C 1 REMARK 465 VAL C 123 REMARK 465 SER C 124 REMARK 465 MET D 1 REMARK 465 THR D 2 REMARK 465 GLY D 93 REMARK 465 ARG D 94 REMARK 465 GLU D 95 REMARK 465 PRO D 96 REMARK 465 ILE D 97 REMARK 465 ASP D 98 REMARK 465 VAL D 99 REMARK 465 MET E 1 REMARK 465 GLU E 2 REMARK 465 PRO E 3 REMARK 465 GLY E 4 REMARK 465 ALA E 5 REMARK 465 GLY E 6 REMARK 465 HIS E 7 REMARK 465 LEU E 8 REMARK 465 ASP E 9 REMARK 465 GLY E 10 REMARK 465 HIS E 11 REMARK 465 ARG E 12 REMARK 465 ALA E 13 REMARK 465 GLY E 14 REMARK 465 SER E 15 REMARK 465 PRO E 16 REMARK 465 SER E 17 REMARK 465 LEU E 18 REMARK 465 ARG E 19 REMARK 465 GLN E 20 REMARK 465 ALA E 21 REMARK 465 LEU E 22 REMARK 465 CYS E 23 REMARK 465 ASP E 24 REMARK 465 GLY E 25 REMARK 465 SER E 26 REMARK 465 ALA E 27 REMARK 465 VAL E 28 REMARK 465 MET E 29 REMARK 465 PHE E 30 REMARK 465 SER E 31 REMARK 465 SER E 32 REMARK 465 LYS E 33 REMARK 465 GLU E 34 REMARK 465 ARG E 35 REMARK 465 GLY E 36 REMARK 465 ARG E 37 REMARK 465 CYS E 38 REMARK 465 THR E 39 REMARK 465 VAL E 40 REMARK 465 ILE E 41 REMARK 465 ASN E 42 REMARK 465 PHE E 43 REMARK 465 VAL E 44 REMARK 465 PRO E 45 REMARK 465 LEU E 46 REMARK 465 GLU E 47 REMARK 465 ALA E 48 REMARK 465 PRO E 49 REMARK 465 LEU E 50 REMARK 465 ARG E 51 REMARK 465 SER E 52 REMARK 465 THR E 53 REMARK 465 PRO E 54 REMARK 465 ARG E 55 REMARK 465 SER E 56 REMARK 465 ARG E 57 REMARK 465 GLN E 58 REMARK 465 VAL E 59 REMARK 465 THR E 60 REMARK 465 GLU E 61 REMARK 465 ALA E 62 REMARK 465 CYS E 63 REMARK 465 GLY E 64 REMARK 465 GLY E 65 REMARK 465 GLU E 66 REMARK 465 GLY E 67 REMARK 465 ARG E 68 REMARK 465 ALA E 69 REMARK 465 VAL E 70 REMARK 465 PRO E 71 REMARK 465 LEU E 72 REMARK 465 GLY E 73 REMARK 465 SER E 74 REMARK 465 GLU E 75 REMARK 465 PRO E 76 REMARK 465 GLU E 77 REMARK 465 TRP E 78 REMARK 465 SER E 79 REMARK 465 VAL E 80 REMARK 465 GLY E 81 REMARK 465 GLY E 82 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 CD2 LEU C 86 CD ARG C 118 1.86 REMARK 500 O LEU C 86 O HOH C 201 1.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU C 86 CA - CB - CG ANGL. DEV. = 23.6 DEGREES REMARK 500 LEU C 86 CB - CG - CD2 ANGL. DEV. = 14.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA B 87 -125.80 54.31 REMARK 500 ASP C 3 -63.13 60.29 REMARK 500 SER C 66 -162.08 66.55 REMARK 500 LEU C 86 -123.98 70.01 REMARK 500 ASP E 162 -121.08 56.13 REMARK 500 REMARK 500 REMARK: NULL DBREF 6B9X A 1 161 UNP Q6IAA8 LTOR1_HUMAN 1 161 DBREF 6B9X B 1 125 UNP Q9Y2Q5 LTOR2_HUMAN 1 125 DBREF 6B9X C 1 124 UNP Q9UHA4 LTOR3_HUMAN 1 124 DBREF 6B9X D 1 99 UNP Q0VGL1 LTOR4_HUMAN 1 99 DBREF1 6B9X E 1 173 UNP A0A0C4DGV4_HUMAN DBREF2 6B9X E A0A0C4DGV4 1 173 SEQADV 6B9X ALA B 0 UNP Q9Y2Q5 EXPRESSION TAG SEQRES 1 A 161 MET GLY CYS CYS TYR SER SER GLU ASN GLU ASP SER ASP SEQRES 2 A 161 GLN ASP ARG GLU GLU ARG LYS LEU LEU LEU ASP PRO SER SEQRES 3 A 161 SER PRO PRO THR LYS ALA LEU ASN GLY ALA GLU PRO ASN SEQRES 4 A 161 TYR HIS SER LEU PRO SER ALA ARG THR ASP GLU GLN ALA SEQRES 5 A 161 LEU LEU SER SER ILE LEU ALA LYS THR ALA SER ASN ILE SEQRES 6 A 161 ILE ASP VAL SER ALA ALA ASP SER GLN GLY MET GLU GLN SEQRES 7 A 161 HIS GLU TYR MET ASP ARG ALA ARG GLN TYR SER THR ARG SEQRES 8 A 161 LEU ALA VAL LEU SER SER SER LEU THR HIS TRP LYS LYS SEQRES 9 A 161 LEU PRO PRO LEU PRO SER LEU THR SER GLN PRO HIS GLN SEQRES 10 A 161 VAL LEU ALA SER GLU PRO ILE PRO PHE SER ASP LEU GLN SEQRES 11 A 161 GLN VAL SER ARG ILE ALA ALA TYR ALA TYR SER ALA LEU SEQRES 12 A 161 SER GLN ILE ARG VAL ASP ALA LYS GLU GLU LEU VAL VAL SEQRES 13 A 161 GLN PHE GLY ILE PRO SEQRES 1 B 126 ALA MET LEU ARG PRO LYS ALA LEU THR GLN VAL LEU SER SEQRES 2 B 126 GLN ALA ASN THR GLY GLY VAL GLN SER THR LEU LEU LEU SEQRES 3 B 126 ASN ASN GLU GLY SER LEU LEU ALA TYR SER GLY TYR GLY SEQRES 4 B 126 ASP THR ASP ALA ARG VAL THR ALA ALA ILE ALA SER ASN SEQRES 5 B 126 ILE TRP ALA ALA TYR ASP ARG ASN GLY ASN GLN ALA PHE SEQRES 6 B 126 ASN GLU ASP ASN LEU LYS PHE ILE LEU MET ASP CYS MET SEQRES 7 B 126 GLU GLY ARG VAL ALA ILE THR ARG VAL ALA ASN LEU LEU SEQRES 8 B 126 LEU CYS MET TYR ALA LYS GLU THR VAL GLY PHE GLY MET SEQRES 9 B 126 LEU LYS ALA LYS ALA GLN ALA LEU VAL GLN TYR LEU GLU SEQRES 10 B 126 GLU PRO LEU THR GLN VAL ALA ALA SER SEQRES 1 C 124 MET ALA ASP ASP LEU LYS ARG PHE LEU TYR LYS LYS LEU SEQRES 2 C 124 PRO SER VAL GLU GLY LEU HIS ALA ILE VAL VAL SER ASP SEQRES 3 C 124 ARG ASP GLY VAL PRO VAL ILE LYS VAL ALA ASN ASP ASN SEQRES 4 C 124 ALA PRO GLU HIS ALA LEU ARG PRO GLY PHE LEU SER THR SEQRES 5 C 124 PHE ALA LEU ALA THR ASP GLN GLY SER LYS LEU GLY LEU SEQRES 6 C 124 SER LYS ASN LYS SER ILE ILE CYS TYR TYR ASN THR TYR SEQRES 7 C 124 GLN VAL VAL GLN PHE ASN ARG LEU PRO LEU VAL VAL SER SEQRES 8 C 124 PHE ILE ALA SER SER SER ALA ASN THR GLY LEU ILE VAL SEQRES 9 C 124 SER LEU GLU LYS GLU LEU ALA PRO LEU PHE GLU GLU LEU SEQRES 10 C 124 ARG GLN VAL VAL GLU VAL SER SEQRES 1 D 99 MET THR SER ALA LEU THR GLN GLY LEU GLU ARG ILE PRO SEQRES 2 D 99 ASP GLN LEU GLY TYR LEU VAL LEU SER GLU GLY ALA VAL SEQRES 3 D 99 LEU ALA SER SER GLY ASP LEU GLU ASN ASP GLU GLN ALA SEQRES 4 D 99 ALA SER ALA ILE SER GLU LEU VAL SER THR ALA CYS GLY SEQRES 5 D 99 PHE ARG LEU HIS ARG GLY MET ASN VAL PRO PHE LYS ARG SEQRES 6 D 99 LEU SER VAL VAL PHE GLY GLU HIS THR LEU LEU VAL THR SEQRES 7 D 99 VAL SER GLY GLN ARG VAL PHE VAL VAL LYS ARG GLN ASN SEQRES 8 D 99 ARG GLY ARG GLU PRO ILE ASP VAL SEQRES 1 E 173 MET GLU PRO GLY ALA GLY HIS LEU ASP GLY HIS ARG ALA SEQRES 2 E 173 GLY SER PRO SER LEU ARG GLN ALA LEU CYS ASP GLY SER SEQRES 3 E 173 ALA VAL MET PHE SER SER LYS GLU ARG GLY ARG CYS THR SEQRES 4 E 173 VAL ILE ASN PHE VAL PRO LEU GLU ALA PRO LEU ARG SER SEQRES 5 E 173 THR PRO ARG SER ARG GLN VAL THR GLU ALA CYS GLY GLY SEQRES 6 E 173 GLU GLY ARG ALA VAL PRO LEU GLY SER GLU PRO GLU TRP SEQRES 7 E 173 SER VAL GLY GLY MET GLU ALA THR LEU GLU GLN HIS LEU SEQRES 8 E 173 GLU ASP THR MET LYS ASN PRO SER ILE VAL GLY VAL LEU SEQRES 9 E 173 CYS THR ASP SER GLN GLY LEU ASN LEU GLY CYS ARG GLY SEQRES 10 E 173 THR LEU SER ASP GLU HIS ALA GLY VAL ILE SER VAL LEU SEQRES 11 E 173 ALA GLN GLN ALA ALA LYS LEU THR SER ASP PRO THR ASP SEQRES 12 E 173 ILE PRO VAL VAL CYS LEU GLU SER ASP ASN GLY ASN ILE SEQRES 13 E 173 MET ILE GLN LYS HIS ASP GLY ILE THR VAL ALA VAL HIS SEQRES 14 E 173 LYS MET ALA SER FORMUL 6 HOH *290(H2 O) HELIX 1 AA1 SER A 97 LYS A 103 1 7 HELIX 2 AA2 GLN A 114 SER A 121 1 8 HELIX 3 AA3 PRO A 125 LEU A 143 1 19 HELIX 4 AA4 SER A 144 ILE A 146 5 3 HELIX 5 AA5 ARG B 3 GLN B 13 1 11 HELIX 6 AA6 ASP B 41 ASN B 61 1 21 HELIX 7 AA7 GLY B 100 ALA B 123 1 24 HELIX 8 AA8 ASP C 3 LEU C 13 1 11 HELIX 9 AA9 PRO C 14 VAL C 16 5 3 HELIX 10 AB1 PRO C 41 LEU C 45 5 5 HELIX 11 AB2 ARG C 46 SER C 51 1 6 HELIX 12 AB3 SER C 51 SER C 61 1 11 HELIX 13 AB4 ASN C 99 VAL C 120 1 22 HELIX 14 AB5 ALA D 4 ARG D 11 1 8 HELIX 15 AB6 ASP D 36 PHE D 53 1 18 HELIX 16 AB7 GLU E 84 LYS E 96 1 13 HELIX 17 AB8 SER E 120 GLU E 122 5 3 HELIX 18 AB9 HIS E 123 ALA E 135 1 13 HELIX 19 AC1 LYS E 136 THR E 138 5 3 SHEET 1 AA110 LEU B 31 GLY B 36 0 SHEET 2 AA110 VAL B 19 LEU B 25 -1 N LEU B 24 O ALA B 33 SHEET 3 AA110 LEU B 89 ALA B 95 -1 O CYS B 92 N LEU B 23 SHEET 4 AA110 GLY B 79 VAL B 86 -1 N THR B 84 O LEU B 91 SHEET 5 AA110 PHE B 71 CYS B 76 -1 N CYS B 76 O GLY B 79 SHEET 6 AA110 ASN C 68 TYR C 74 -1 O ILE C 72 N LEU B 73 SHEET 7 AA110 TYR C 78 ARG C 85 -1 O VAL C 80 N CYS C 73 SHEET 8 AA110 LEU C 88 SER C 95 -1 O PHE C 92 N VAL C 81 SHEET 9 AA110 LEU C 19 SER C 25 -1 N VAL C 23 O SER C 91 SHEET 10 AA110 PRO C 31 ALA C 36 -1 O VAL C 32 N VAL C 24 SHEET 1 AA210 ALA D 25 GLY D 31 0 SHEET 2 AA210 GLN D 15 SER D 22 -1 N VAL D 20 O LEU D 27 SHEET 3 AA210 ARG D 83 GLN D 90 -1 O LYS D 88 N LEU D 16 SHEET 4 AA210 HIS D 73 SER D 80 -1 N LEU D 76 O VAL D 87 SHEET 5 AA210 ARG D 65 VAL D 69 -1 N VAL D 68 O LEU D 75 SHEET 6 AA210 VAL E 146 SER E 151 -1 O GLU E 150 N ARG D 65 SHEET 7 AA210 GLY E 154 HIS E 161 -1 O ILE E 158 N VAL E 147 SHEET 8 AA210 ILE E 164 LYS E 170 -1 O ILE E 164 N HIS E 161 SHEET 9 AA210 ILE E 100 THR E 106 -1 N GLY E 102 O HIS E 169 SHEET 10 AA210 ASN E 112 GLY E 117 -1 O LEU E 113 N CYS E 105 CRYST1 168.705 168.705 52.325 90.00 90.00 120.00 P 61 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005928 0.003422 0.000000 0.00000 SCALE2 0.000000 0.006844 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019111 0.00000