HEADER SIGNALING PROTEIN 13-OCT-17 6BAK TITLE THE STRUCTURE OF THE STIGMATELLA AURANTIACA PHYTOCHROME CHROMOPHORE TITLE 2 BINDING DOMAIN T289H MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOTORECEPTOR-HISTIDINE KINASE BPHP; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PHYTOCHROME CHROMOPHORE BINDING DOMAIN (UNP RESIDUES 16- COMPND 5 318); COMPND 6 SYNONYM: SENSOR PROTEIN; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STIGMATELLA AURANTIACA DW4/3-1; SOURCE 3 ORGANISM_TAXID: 378806; SOURCE 4 STRAIN: DW4/3-1; SOURCE 5 GENE: STAUR_8015, STIAU_3396; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.SCHMIDT,E.STOJKOVIC REVDAT 5 04-OCT-23 6BAK 1 REMARK REVDAT 4 27-NOV-19 6BAK 1 REMARK REVDAT 3 20-FEB-19 6BAK 1 REMARK REVDAT 2 31-OCT-18 6BAK 1 JRNL REVDAT 1 19-SEP-18 6BAK 0 JRNL AUTH N.C.WOITOWICH,A.S.HALAVATY,P.WALTZ,C.KUPITZ,J.VALERA, JRNL AUTH 2 G.TRACY,K.D.GALLAGHER,E.CLAESSON,T.NAKANE,S.PANDEY,G.NELSON, JRNL AUTH 3 R.TANAKA,E.NANGO,E.MIZOHATA,S.OWADA,K.TONO,Y.JOTI, JRNL AUTH 4 A.C.NUGENT,H.PATEL,A.MAPARA,J.HOPKINS,P.DUONG,D.BIZHGA, JRNL AUTH 5 S.E.KOVALEVA,R.ST PETER,C.N.HERNANDEZ,W.B.OZAROWSKI, JRNL AUTH 6 S.ROY-CHOWDHURI,J.H.YANG,P.EDLUND,H.TAKALA,J.IHALAINEN, JRNL AUTH 7 J.BRAYSHAW,T.NORWOOD,I.POUDYAL,P.FROMME,J.C.H.SPENCE, JRNL AUTH 8 K.MOFFAT,S.WESTENHOFF,M.SCHMIDT,E.A.STOJKOVIC JRNL TITL STRUCTURAL BASIS FOR LIGHT CONTROL OF CELL DEVELOPMENT JRNL TITL 2 REVEALED BY CRYSTAL STRUCTURES OF A MYXOBACTERIAL JRNL TITL 3 PHYTOCHROME. JRNL REF IUCRJ V. 5 619 2018 JRNL REFN ESSN 2052-2525 JRNL PMID 30224965 JRNL DOI 10.1107/S2052252518010631 REMARK 2 REMARK 2 RESOLUTION. 1.92 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.10.1_2155: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.92 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.42 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 71392 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.207 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3638 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 23.4248 - 5.6625 0.80 2257 122 0.1970 0.1981 REMARK 3 2 5.6625 - 4.5050 0.99 2717 124 0.1542 0.1800 REMARK 3 3 4.5050 - 3.9386 0.99 2693 141 0.1448 0.1569 REMARK 3 4 3.9386 - 3.5798 1.00 2669 153 0.1589 0.1783 REMARK 3 5 3.5798 - 3.3240 0.99 2671 123 0.1833 0.2120 REMARK 3 6 3.3240 - 3.1285 0.99 2634 149 0.1993 0.2037 REMARK 3 7 3.1285 - 2.9722 0.99 2660 142 0.2124 0.2326 REMARK 3 8 2.9722 - 2.8430 0.99 2641 151 0.2198 0.2513 REMARK 3 9 2.8430 - 2.7337 0.99 2644 131 0.2263 0.2498 REMARK 3 10 2.7337 - 2.6395 0.99 2632 142 0.2384 0.2512 REMARK 3 11 2.6395 - 2.5571 0.99 2669 118 0.2327 0.2952 REMARK 3 12 2.5571 - 2.4841 0.99 2617 164 0.2469 0.2726 REMARK 3 13 2.4841 - 2.4188 0.99 2600 145 0.2637 0.2854 REMARK 3 14 2.4188 - 2.3598 0.99 2604 164 0.2697 0.3085 REMARK 3 15 2.3598 - 2.3062 0.99 2628 117 0.2687 0.2864 REMARK 3 16 2.3062 - 2.2572 0.99 2588 155 0.2728 0.2960 REMARK 3 17 2.2572 - 2.2121 0.99 2647 131 0.2760 0.2776 REMARK 3 18 2.2121 - 2.1703 0.99 2587 138 0.2787 0.2746 REMARK 3 19 2.1703 - 2.1316 0.99 2612 147 0.2653 0.2647 REMARK 3 20 2.1316 - 2.0955 0.98 2582 143 0.2845 0.3127 REMARK 3 21 2.0955 - 2.0617 0.98 2585 145 0.3093 0.3303 REMARK 3 22 2.0617 - 2.0300 0.99 2611 148 0.3265 0.3378 REMARK 3 23 2.0300 - 2.0002 0.98 2600 128 0.3293 0.3401 REMARK 3 24 2.0002 - 1.9720 0.98 2568 161 0.3503 0.3380 REMARK 3 25 1.9720 - 1.9454 0.98 2588 133 0.3517 0.3350 REMARK 3 26 1.9454 - 1.9201 0.92 2450 123 0.3897 0.4192 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.770 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.018 2488 REMARK 3 ANGLE : 1.822 3386 REMARK 3 CHIRALITY : 0.123 367 REMARK 3 PLANARITY : 0.009 444 REMARK 3 DIHEDRAL : 18.015 1484 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6BAK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-OCT-17. REMARK 100 THE DEPOSITION ID IS D_1000230543. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-OCT-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.987 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 71587 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.030 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 4.400 REMARK 200 R MERGE (I) : 0.08800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 6.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.03 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.7 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.98900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4RQ9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 82.58 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 7.06 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.07 M SODIUM ACETATE TRIHYDRATE, PH REMARK 280 4.6, 1.4 M SODIUM FORMATE, 30% W/V GLYCEROL, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.82733 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 31.91367 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 31.91367 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 63.82733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2570 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 31.91367 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 605 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O SER A 127 N ARG A 129 2.14 REMARK 500 O HOH A 731 O HOH A 773 2.15 REMARK 500 O HOH A 719 O HOH A 739 2.17 REMARK 500 CB CYS A 18 CBC BLR A 401 2.17 REMARK 500 O SER A 314 O HOH A 501 2.17 REMARK 500 O HOH A 729 O HOH A 733 2.17 REMARK 500 O HOH A 503 O HOH A 673 2.18 REMARK 500 O HOH A 818 O HOH A 820 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS A 90 CA LYS A 90 C -0.173 REMARK 500 GLU A 306 CG GLU A 306 CD 0.102 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 19 CB - CG - OD1 ANGL. DEV. = 6.2 DEGREES REMARK 500 ARG A 88 C - N - CA ANGL. DEV. = 17.7 DEGREES REMARK 500 ARG A 88 N - CA - C ANGL. DEV. = 19.0 DEGREES REMARK 500 LYS A 90 C - N - CA ANGL. DEV. = -15.1 DEGREES REMARK 500 LYS A 90 N - CA - CB ANGL. DEV. = 12.9 DEGREES REMARK 500 LYS A 90 CD - CE - NZ ANGL. DEV. = 17.7 DEGREES REMARK 500 LYS A 90 N - CA - C ANGL. DEV. = -19.2 DEGREES REMARK 500 GLN A 91 N - CA - C ANGL. DEV. = 20.6 DEGREES REMARK 500 ARG A 173 NE - CZ - NH1 ANGL. DEV. = -5.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 17 -154.05 55.81 REMARK 500 ALA A 87 83.98 29.13 REMARK 500 ARG A 88 35.01 -21.23 REMARK 500 GLN A 91 -14.54 -36.99 REMARK 500 VAL A 101 -75.11 -117.77 REMARK 500 VAL A 104 84.21 63.02 REMARK 500 HIS A 128 21.20 -47.17 REMARK 500 ARG A 129 -148.87 63.10 REMARK 500 ALA A 131 160.99 -48.78 REMARK 500 PHE A 134 -3.84 76.07 REMARK 500 ARG A 195 -26.80 140.57 REMARK 500 GLU A 243 132.11 114.50 REMARK 500 ARG A 295 89.14 -156.15 REMARK 500 LEU A 316 46.19 -68.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 242 GLU A 243 -113.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 816 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH A 817 DISTANCE = 5.90 ANGSTROMS REMARK 525 HOH A 818 DISTANCE = 6.19 ANGSTROMS REMARK 525 HOH A 819 DISTANCE = 6.33 ANGSTROMS REMARK 525 HOH A 820 DISTANCE = 6.37 ANGSTROMS REMARK 525 HOH A 821 DISTANCE = 7.13 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BLR A 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4RQ9 RELATED DB: PDB DBREF 6BAK A 16 318 UNP Q097N3 Q097N3_STIAD 16 318 SEQADV 6BAK HIS A 289 UNP Q097N3 THR 289 ENGINEERED MUTATION SEQRES 1 A 303 THR ASN CYS ASP ARG GLU PRO ILE HIS ILE PRO GLY ALA SEQRES 2 A 303 ILE GLN PRO HIS GLY VAL LEU LEU VAL LEU SER GLU PRO SEQRES 3 A 303 GLY LEU VAL LEU THR HIS ALA SER GLU ASN ALA PRO ALA SEQRES 4 A 303 VAL LEU GLY ASN SER ALA GLU GLN LEU LEU GLY ALA PRO SEQRES 5 A 303 LEU GLY HIS PHE ILE GLU PRO SER VAL ARG GLU PRO LEU SEQRES 6 A 303 GLU ALA ASP LEU ARG SER ALA ARG LEU LYS GLN LEU ASN SEQRES 7 A 303 PRO LEU LYS VAL VAL TRP ARG VAL ASP GLY VAL ASP ARG SEQRES 8 A 303 PHE PHE ASP GLY ILE ALA HIS ARG HIS GLN GLY ARG LEU SEQRES 9 A 303 ILE LEU GLU LEU GLU PRO SER SER HIS ARG GLU ALA VAL SEQRES 10 A 303 PRO PHE LEU SER PHE PHE HIS ALA VAL ARG ASP GLY LEU SEQRES 11 A 303 SER ARG LEU ARG ASP ALA ARG ASP LEU GLN GLU LEU CYS SEQRES 12 A 303 GLU ALA VAL VAL GLN GLU VAL ARG GLY LEU THR GLY PHE SEQRES 13 A 303 ASP ARG ALA ILE ILE TYR ARG PHE ASP ALA GLU TRP ASN SEQRES 14 A 303 GLY SER VAL ILE ALA GLU ALA ARG ASP ALA ARG ALA ASP SEQRES 15 A 303 PRO TYR LEU GLY LEU HIS PHE PRO ALA SER ASP ILE PRO SEQRES 16 A 303 ARG GLN ALA ARG GLU LEU TYR GLN LEU ASN TRP LEU ARG SEQRES 17 A 303 ILE ILE PRO THR ILE ASP TYR GLN PRO ALA ARG VAL ARG SEQRES 18 A 303 ALA LEU PRO GLY HIS GLY GLU PRO LEU ASP LEU SER PHE SEQRES 19 A 303 SER VAL LEU ARG SER VAL SER PRO ILE HIS LEU GLU TYR SEQRES 20 A 303 LEU HIS ASN MET GLY VAL GLN ALA SER MET SER ILE SER SEQRES 21 A 303 LEU MET LYS ASP GLY LYS LEU TRP GLY LEU ILE SER CYS SEQRES 22 A 303 HIS GLN VAL SER GLY THR ARG TYR VAL PRO TYR GLU VAL SEQRES 23 A 303 ARG THR ALA CYS GLU PHE LEU GLY GLU VAL MET SER SER SEQRES 24 A 303 LEU LEU ALA ALA HET BLR A 401 43 HETNAM BLR 3-[5-[(Z)-(4-ETHENYL-3-METHYL-5-OXIDANYLIDENE-PYRROL-2- HETNAM 2 BLR YLIDENE)METHYL]-2-[[5-[(Z)-(3-ETHENYL-4-METHYL-5- HETNAM 3 BLR OXIDANYLIDENE-PYRROL-2-YLIDENE)METHYL]-3-(3-HYDROXY-3- HETNAM 4 BLR OXOPROPYL)-4-METHYL-1H-PYRROL-2-YL]METHYL]-4-METHYL- HETNAM 5 BLR 1H-PYRROL-3-YL]PROPANOIC ACID HETSYN BLR BILIRUBIN IX ALPHA FORMUL 2 BLR C33 H36 N4 O6 FORMUL 3 HOH *321(H2 O) HELIX 1 AA1 ASN A 17 GLU A 21 5 5 HELIX 2 AA2 ASN A 51 GLY A 57 1 7 HELIX 3 AA3 SER A 59 LEU A 64 1 6 HELIX 4 AA4 PRO A 67 ILE A 72 5 6 HELIX 5 AA5 GLU A 73 ARG A 85 1 13 HELIX 6 AA6 ARG A 88 ASN A 93 1 6 HELIX 7 AA7 PHE A 134 ALA A 151 1 18 HELIX 8 AA8 ASP A 153 GLY A 170 1 18 HELIX 9 AA9 PRO A 205 ILE A 209 5 5 HELIX 10 AB1 PRO A 210 ASN A 220 1 11 HELIX 11 AB2 SER A 256 GLY A 267 1 12 HELIX 12 AB3 PRO A 298 LEU A 316 1 19 SHEET 1 AA1 7 ALA A 28 ILE A 29 0 SHEET 2 AA1 7 ALA A 233 ALA A 237 -1 O ALA A 233 N ILE A 29 SHEET 3 AA1 7 LEU A 45 SER A 49 -1 N ALA A 48 O ARG A 236 SHEET 4 AA1 7 VAL A 34 LEU A 38 -1 N VAL A 37 O THR A 46 SHEET 5 AA1 7 ARG A 118 PRO A 125 -1 O LEU A 123 N VAL A 34 SHEET 6 AA1 7 ASP A 105 HIS A 115 -1 N HIS A 113 O ILE A 120 SHEET 7 AA1 7 LEU A 95 ARG A 100 -1 N LEU A 95 O GLY A 110 SHEET 1 AA2 6 HIS A 203 PHE A 204 0 SHEET 2 AA2 6 GLY A 185 ARG A 192 -1 N GLY A 185 O PHE A 204 SHEET 3 AA2 6 ARG A 173 PHE A 179 -1 N ARG A 178 O SER A 186 SHEET 4 AA2 6 LYS A 281 GLN A 290 -1 O LEU A 285 N TYR A 177 SHEET 5 AA2 6 ALA A 270 LYS A 278 -1 N LEU A 276 O TRP A 283 SHEET 6 AA2 6 LEU A 222 ILE A 225 -1 N ILE A 225 O SER A 271 LINK SG CYS A 18 CBC BLR A 401 1555 1555 1.82 CISPEP 1 GLU A 40 PRO A 41 0 10.46 CISPEP 2 ALA A 87 ARG A 88 0 14.03 CISPEP 3 LYS A 90 GLN A 91 0 20.99 CISPEP 4 ASN A 93 PRO A 94 0 -3.06 CISPEP 5 ASP A 102 GLY A 103 0 0.42 CISPEP 6 GLY A 103 VAL A 104 0 18.59 CISPEP 7 ARG A 129 GLU A 130 0 -9.91 SITE 1 AC1 24 CYS A 18 GLU A 21 TYR A 177 TYR A 199 SITE 2 AC1 24 PHE A 204 ASP A 208 ILE A 209 PRO A 210 SITE 3 AC1 24 TYR A 217 ARG A 253 VAL A 255 SER A 256 SITE 4 AC1 24 HIS A 259 TYR A 262 MET A 266 SER A 271 SITE 5 AC1 24 SER A 273 SER A 287 HIS A 289 HOH A 526 SITE 6 AC1 24 HOH A 539 HOH A 581 HOH A 592 HOH A 646 CRYST1 131.449 131.449 95.741 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007608 0.004392 0.000000 0.00000 SCALE2 0.000000 0.008784 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010445 0.00000