HEADER STRUCTURAL PROTEIN 19-OCT-17 6BBT TITLE STRUCTURE OF THE MAJOR PILIN PROTEIN (T-13) FROM STREPTOCOCCUS TITLE 2 PYOGENES SEROTYPE GAS131465 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MAJOR PILIN BACKBONE PROTEIN T-ANTIGEN, T13; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 OTHER_DETAILS: THIS PROTEIN CONTAINS TWO INTRA-MOLECULAR ISOPEPTIDE COMPND 6 BONDS BETWEEN RESIDUES K15 AND N152, AND K163 AND N277. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PYOGENES; SOURCE 3 ORGANISM_TAXID: 1314; SOURCE 4 GENE: TEE; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: K11; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PPROEXHTA KEYWDS TRYPSIN-RESISTANT SURFACE PROTEIN TEE13, LANCEFIELD T-ANTIGEN, KEYWDS 2 SEROTYPING, PILI, FIMBRIAE PROTEINS, STREPTOCOCCUS PYOGENES, KEYWDS 3 ISOPEPTIDE BOND., STRUCTURAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.G.YOUNG,E.N.BAKER,N.J.MORELAND REVDAT 4 04-OCT-23 6BBT 1 REMARK REVDAT 3 01-JAN-20 6BBT 1 REMARK REVDAT 2 19-JUN-19 6BBT 1 JRNL REVDAT 1 24-OCT-18 6BBT 0 JRNL AUTH P.G.YOUNG,J.M.RAYNES,J.M.LOH,T.PROFT,E.N.BAKER,N.J.MORELAND JRNL TITL GROUP ASTREPTOCOCCUST ANTIGENS HAVE A HIGHLY CONSERVED JRNL TITL 2 STRUCTURE CONCEALED UNDER A HETEROGENEOUS SURFACE THAT HAS JRNL TITL 3 IMPLICATIONS FOR VACCINE DESIGN. JRNL REF INFECT.IMMUN. V. 87 2019 JRNL REFN ESSN 1098-5522 JRNL PMID 30936156 JRNL DOI 10.1128/IAI.00205-19 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0131 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 85.74 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 58361 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.205 REMARK 3 R VALUE (WORKING SET) : 0.204 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3052 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4238 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3120 REMARK 3 BIN FREE R VALUE SET COUNT : 229 REMARK 3 BIN FREE R VALUE : 0.3220 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4078 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 411 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 17.10 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.87000 REMARK 3 B22 (A**2) : -0.01000 REMARK 3 B33 (A**2) : 0.88000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.134 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.128 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.109 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.936 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4257 ; 0.009 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 4014 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5748 ; 1.426 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9299 ; 1.127 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 543 ; 6.490 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 168 ;34.980 ;26.190 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 763 ;12.612 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;11.285 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 681 ; 0.078 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4757 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 865 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2181 ; 1.651 ; 2.840 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2180 ; 1.649 ; 2.838 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2721 ; 2.732 ; 4.224 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2722 ; 2.732 ; 4.225 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2076 ; 2.001 ; 2.943 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2076 ; 1.999 ; 2.943 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3028 ; 3.291 ; 4.335 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 4697 ; 6.614 ;22.225 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 4697 ; 6.613 ;22.226 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6BBT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-OCT-17. REMARK 100 THE DEPOSITION ID IS D_1000229363. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 7.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : DOUBLE SI WITH SAGITTALY BENT REMARK 200 SECOND CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 61489 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 85.740 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 14.90 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.94 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.6 REMARK 200 STARTING MODEL: 3B2M REMARK 200 REMARK 200 REMARK: SMALL HEXAGONAL PLATES REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 59.71 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% W/V PEG 6000, 0.2 M MOPS PH 7.3, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.88600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.35550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 57.48400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.35550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.88600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 57.48400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: THE TEE13 MAJOR PILIN PROTEIN IS POLYMERISED END TO END REMARK 300 INTO LONG CHAINS AT THE CELL SURFACE WITH THE AID OF A PILIN REMARK 300 SPECIFIC SORTASE. THE CRYSTAL PACKING DOES NOT RESEMBLE THIS REMARK 300 ARRANGEMENT. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 1 REMARK 465 LYS A 44 REMARK 465 THR A 45 REMARK 465 LYS A 46 REMARK 465 ASP A 47 REMARK 465 GLY A 48 REMARK 465 LYS A 125 REMARK 465 GLU A 126 REMARK 465 GLY A 127 REMARK 465 GLY A 128 REMARK 465 ASN A 168 REMARK 465 THR A 169 REMARK 465 GLY A 170 REMARK 465 GLU A 171 REMARK 465 LEU A 172 REMARK 465 GLN A 173 REMARK 465 GLU B 1 REMARK 465 THR B 45 REMARK 465 LYS B 46 REMARK 465 ASP B 47 REMARK 465 GLY B 48 REMARK 465 GLU B 126 REMARK 465 GLY B 127 REMARK 465 GLY B 128 REMARK 465 GLY B 129 REMARK 465 THR B 169 REMARK 465 GLY B 170 REMARK 465 GLU B 171 REMARK 465 LEU B 172 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 2 OG1 CG2 REMARK 470 LEU A 49 CG CD1 CD2 REMARK 470 GLU A 50 CG CD OE1 OE2 REMARK 470 GLU A 107 CG CD OE1 OE2 REMARK 470 TYR A 134 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASP A 143 CG OD1 OD2 REMARK 470 LYS A 238 CG CD CE NZ REMARK 470 GLU A 252 CG CD OE1 OE2 REMARK 470 ILE A 253A CG1 CG2 CD1 REMARK 470 ASP A 254 CG OD1 OD2 REMARK 470 THR B 2 OG1 CG2 REMARK 470 LYS B 9 CG CD CE NZ REMARK 470 LYS B 44 CG CD CE NZ REMARK 470 LEU B 49 CG CD1 CD2 REMARK 470 GLU B 50 CG CD OE1 OE2 REMARK 470 GLU B 85 CG CD OE1 OE2 REMARK 470 ILE B 92 CG1 CG2 CD1 REMARK 470 GLU B 107 CG CD OE1 OE2 REMARK 470 LYS B 125 CG CD CE NZ REMARK 470 ASP B 143 CG OD1 OD2 REMARK 470 ASN B 168 CG OD1 ND2 REMARK 470 GLN B 173 CG CD OE1 NE2 REMARK 470 GLU B 252 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS B 163 OD1 ASN B 277 2.00 REMARK 500 NZ LYS B 15 OD1 ASN B 152 2.07 REMARK 500 NZ LYS A 15 OD1 ASN A 152 2.12 REMARK 500 NZ LYS A 163 OD1 ASN A 277 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 72 -166.01 -116.66 REMARK 500 THR A 157 -161.30 -128.64 REMARK 500 ASP A 267 -157.97 -142.51 REMARK 500 LYS B 72 -151.45 -122.43 REMARK 500 THR B 157 -158.48 -133.62 REMARK 500 HIS B 218 -10.40 77.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 30 O REMARK 620 2 THR B 30 OG1 62.7 REMARK 620 3 THR B 32 OG1 131.1 114.5 REMARK 620 4 ASP B 104 OD2 72.0 119.6 125.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 302 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 250 OE1 REMARK 620 2 ASP B 267 OD1 97.6 REMARK 620 3 SER B 269 O 146.7 81.8 REMARK 620 4 SER B 269 OG 84.5 70.8 63.7 REMARK 620 5 ASP B 271 OD1 94.5 167.7 87.0 108.5 REMARK 620 6 HOH B 433 O 75.0 107.9 137.1 159.2 77.2 REMARK 620 7 HOH B 461 O 153.7 84.1 59.5 120.3 85.9 79.5 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide LYS B 15 and ASN B REMARK 800 152 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Di-peptide LYS B 163 and ASN B REMARK 800 277 DBREF1 6BBT A 1 280 UNP A0A096ZHE3_STRPY DBREF2 6BBT A A0A096ZHE3 1 280 DBREF1 6BBT B 1 280 UNP A0A096ZHE3_STRPY DBREF2 6BBT B A0A096ZHE3 1 280 SEQRES 1 A 280 GLU THR ALA GLY VAL VAL THR GLY LYS THR LEU PRO ILE SEQRES 2 A 280 THR LYS SER MET ILE TYR THR ASP ASN GLU ILE LEU MET SEQRES 3 A 280 PRO LYS THR THR PHE THR PHE THR ILE GLU PRO ASP THR SEQRES 4 A 280 THR ALA SER GLY LYS THR LYS ASP GLY LEU GLU ILE LYS SEQRES 5 A 280 SER GLY GLU THR THR GLY LEU THR THR LYS ALA ILE VAL SEQRES 6 A 280 SER TYR ASP ASN THR ASP LYS GLU SER ALA LYS ASN LYS SEQRES 7 A 280 THR SER ASN PHE ASN PHE GLU THR VAL THR PHE SER GLY SEQRES 8 A 280 ILE GLY ILE TYR ARG TYR THR VAL SER GLU GLN ASN ASP SEQRES 9 A 280 GLY ILE GLU GLY ILE GLN TYR ASP GLY LYS LYS TRP THR SEQRES 10 A 280 VAL ASP VAL TYR VAL GLY ASN LYS GLU GLY GLY GLY PHE SEQRES 11 A 280 GLU PRO LYS TYR VAL VAL SER LYS GLU VAL ASN SER ASP SEQRES 12 A 280 VAL LYS LYS PRO ILE ARG PHE GLU ASN SER PHE LYS THR SEQRES 13 A 280 THR SER LEU LYS ILE GLU LYS GLN VAL THR GLY ASN THR SEQRES 14 A 280 GLY GLU LEU GLN LYS ASP PHE ASN PHE THR LEU ILE LEU SEQRES 15 A 280 GLU ALA SER ALA LEU TYR GLU LYS GLY GLN VAL VAL LYS SEQRES 16 A 280 ILE ILE GLN ASP GLY GLN THR LYS ASP VAL VAL ILE GLY SEQRES 17 A 280 GLN GLU TYR LYS PHE THR LEU HIS ASP HIS GLN SER ILE SEQRES 18 A 280 MET LEU ALA LYS LEU PRO ILE GLY ILE SER TYR LYS LEU SEQRES 19 A 280 THR GLU ASP LYS ALA ASP GLY TYR THR THR THR ALA THR SEQRES 20 A 280 LEU LYS GLU GLY GLU ILE ASP ALA LYS GLU TYR VAL LEU SEQRES 21 A 280 GLY ASN LEU GLN LYS THR ASP GLU SER ALA ASP GLU ILE SEQRES 22 A 280 VAL VAL THR ASN LYS ARG ASP SEQRES 1 B 280 GLU THR ALA GLY VAL VAL THR GLY LYS THR LEU PRO ILE SEQRES 2 B 280 THR LYS SER MET ILE TYR THR ASP ASN GLU ILE LEU MET SEQRES 3 B 280 PRO LYS THR THR PHE THR PHE THR ILE GLU PRO ASP THR SEQRES 4 B 280 THR ALA SER GLY LYS THR LYS ASP GLY LEU GLU ILE LYS SEQRES 5 B 280 SER GLY GLU THR THR GLY LEU THR THR LYS ALA ILE VAL SEQRES 6 B 280 SER TYR ASP ASN THR ASP LYS GLU SER ALA LYS ASN LYS SEQRES 7 B 280 THR SER ASN PHE ASN PHE GLU THR VAL THR PHE SER GLY SEQRES 8 B 280 ILE GLY ILE TYR ARG TYR THR VAL SER GLU GLN ASN ASP SEQRES 9 B 280 GLY ILE GLU GLY ILE GLN TYR ASP GLY LYS LYS TRP THR SEQRES 10 B 280 VAL ASP VAL TYR VAL GLY ASN LYS GLU GLY GLY GLY PHE SEQRES 11 B 280 GLU PRO LYS TYR VAL VAL SER LYS GLU VAL ASN SER ASP SEQRES 12 B 280 VAL LYS LYS PRO ILE ARG PHE GLU ASN SER PHE LYS THR SEQRES 13 B 280 THR SER LEU LYS ILE GLU LYS GLN VAL THR GLY ASN THR SEQRES 14 B 280 GLY GLU LEU GLN LYS ASP PHE ASN PHE THR LEU ILE LEU SEQRES 15 B 280 GLU ALA SER ALA LEU TYR GLU LYS GLY GLN VAL VAL LYS SEQRES 16 B 280 ILE ILE GLN ASP GLY GLN THR LYS ASP VAL VAL ILE GLY SEQRES 17 B 280 GLN GLU TYR LYS PHE THR LEU HIS ASP HIS GLN SER ILE SEQRES 18 B 280 MET LEU ALA LYS LEU PRO ILE GLY ILE SER TYR LYS LEU SEQRES 19 B 280 THR GLU ASP LYS ALA ASP GLY TYR THR THR THR ALA THR SEQRES 20 B 280 LEU LYS GLU GLY GLU ILE ASP ALA LYS GLU TYR VAL LEU SEQRES 21 B 280 GLY ASN LEU GLN LYS THR ASP GLU SER ALA ASP GLU ILE SEQRES 22 B 280 VAL VAL THR ASN LYS ARG ASP HET GOL A 301 6 HET CA B 301 1 HET CA B 302 1 HET CL B 303 1 HET GOL B 304 6 HETNAM GOL GLYCEROL HETNAM CA CALCIUM ION HETNAM CL CHLORIDE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL 2(C3 H8 O3) FORMUL 4 CA 2(CA 2+) FORMUL 6 CL CL 1- FORMUL 8 HOH *411(H2 O) HELIX 1 AA1 LYS A 72 ALA A 75 5 4 HELIX 2 AA2 LYS B 72 ALA B 75 5 4 SHEET 1 AA1 5 VAL A 5 THR A 7 0 SHEET 2 AA1 5 GLU A 131 GLU A 139 -1 O VAL A 135 N VAL A 6 SHEET 3 AA1 5 TRP A 116 GLY A 123 -1 N THR A 117 O LYS A 138 SHEET 4 AA1 5 GLY A 93 GLU A 101 -1 N GLY A 93 O VAL A 122 SHEET 5 AA1 5 ILE A 51 SER A 53 1 N LYS A 52 O ILE A 94 SHEET 1 AA2 6 VAL A 5 THR A 7 0 SHEET 2 AA2 6 GLU A 131 GLU A 139 -1 O VAL A 135 N VAL A 6 SHEET 3 AA2 6 TRP A 116 GLY A 123 -1 N THR A 117 O LYS A 138 SHEET 4 AA2 6 GLY A 93 GLU A 101 -1 N GLY A 93 O VAL A 122 SHEET 5 AA2 6 THR A 29 PRO A 37 -1 N GLU A 36 O THR A 98 SHEET 6 AA2 6 LYS A 62 TYR A 67 -1 O TYR A 67 N THR A 29 SHEET 1 AA3 4 ASN A 77 ASN A 83 0 SHEET 2 AA3 4 THR A 10 MET A 17 -1 N LYS A 15 O LYS A 78 SHEET 3 AA3 4 ILE A 148 PHE A 154 1 O PHE A 150 N SER A 16 SHEET 4 AA3 4 ILE A 109 GLN A 110 -1 N GLN A 110 O SER A 153 SHEET 1 AA4 5 SER A 220 PRO A 227 0 SHEET 2 AA4 5 THR A 156 THR A 166 -1 N THR A 157 O LEU A 226 SHEET 3 AA4 5 ASP A 271 ARG A 279 1 O ILE A 273 N LYS A 160 SHEET 4 AA4 5 TYR A 242 GLU A 250 -1 N THR A 243 O LYS A 278 SHEET 5 AA4 5 ILE A 253A GLU A 257 -1 O LYS A 256 N LEU A 248 SHEET 1 AA5 4 TYR A 211 LEU A 215 0 SHEET 2 AA5 4 PHE A 176 GLU A 183 -1 N PHE A 176 O LEU A 215 SHEET 3 AA5 4 SER A 231 GLU A 236 -1 O SER A 231 N GLU A 183 SHEET 4 AA5 4 GLN A 264 LYS A 265 -1 O GLN A 264 N TYR A 232 SHEET 1 AA6 2 VAL A 193 GLN A 198 0 SHEET 2 AA6 2 GLN A 201 VAL A 206 -1 O LYS A 203 N ILE A 196 SHEET 1 AA7 5 VAL B 5 THR B 7 0 SHEET 2 AA7 5 GLU B 131 GLU B 139 -1 O VAL B 135 N VAL B 6 SHEET 3 AA7 5 TRP B 116 GLY B 123 -1 N TYR B 121 O LYS B 133 SHEET 4 AA7 5 GLY B 93 GLU B 101 -1 N GLY B 93 O VAL B 122 SHEET 5 AA7 5 ILE B 51 SER B 53 1 N LYS B 52 O ILE B 94 SHEET 1 AA8 6 VAL B 5 THR B 7 0 SHEET 2 AA8 6 GLU B 131 GLU B 139 -1 O VAL B 135 N VAL B 6 SHEET 3 AA8 6 TRP B 116 GLY B 123 -1 N TYR B 121 O LYS B 133 SHEET 4 AA8 6 GLY B 93 GLU B 101 -1 N GLY B 93 O VAL B 122 SHEET 5 AA8 6 THR B 29 PRO B 37 -1 N GLU B 36 O THR B 98 SHEET 6 AA8 6 LYS B 62 TYR B 67 -1 O TYR B 67 N THR B 29 SHEET 1 AA9 4 ASN B 77 ASN B 83 0 SHEET 2 AA9 4 THR B 10 MET B 17 -1 N LYS B 15 O LYS B 78 SHEET 3 AA9 4 ILE B 148 PHE B 154 1 O PHE B 150 N THR B 14 SHEET 4 AA9 4 ILE B 109 GLN B 110 -1 N GLN B 110 O SER B 153 SHEET 1 AB1 7 GLN B 201 VAL B 206 0 SHEET 2 AB1 7 VAL B 193 GLN B 198 -1 N VAL B 194 O VAL B 205 SHEET 3 AB1 7 SER B 220 PRO B 227 -1 O MET B 222 N ILE B 197 SHEET 4 AB1 7 THR B 156 THR B 166 -1 N LEU B 159 O LEU B 223 SHEET 5 AB1 7 ASP B 271 ARG B 279 1 O VAL B 275 N GLU B 162 SHEET 6 AB1 7 TYR B 242 GLU B 250 -1 N THR B 243 O LYS B 278 SHEET 7 AB1 7 LYS B 256 GLU B 257 -1 O LYS B 256 N LEU B 248 SHEET 1 AB2 4 TYR B 211 LEU B 215 0 SHEET 2 AB2 4 PHE B 176 LEU B 182 -1 N PHE B 176 O LEU B 215 SHEET 3 AB2 4 SER B 231 GLU B 236 -1 O THR B 235 N THR B 179 SHEET 4 AB2 4 GLN B 264 LYS B 265 -1 O GLN B 264 N TYR B 232 LINK NZ LYS A 15 CG ASN A 152 1555 1555 1.27 LINK NZ LYS A 163 CG ASN A 277 1555 1555 1.26 LINK NZ LYS B 15 CG ASN B 152 1555 1555 1.25 LINK NZ LYS B 163 CG ASN B 277 1555 1555 1.26 LINK O THR B 30 CA CA B 301 1555 1555 3.12 LINK OG1 THR B 30 CA CA B 301 1555 1555 2.75 LINK OG1 THR B 32 CA CA B 301 1555 1555 2.67 LINK OD2 ASP B 104 CA CA B 301 1555 1555 2.83 LINK OE1 GLU B 250 CA CA B 302 1555 1555 2.55 LINK OD1 ASP B 267 CA CA B 302 1555 1555 2.42 LINK O SER B 269 CA CA B 302 1555 1555 3.09 LINK OG SER B 269 CA CA B 302 1555 1555 2.92 LINK OD1 ASP B 271 CA CA B 302 1555 1555 2.35 LINK CA CA B 302 O HOH B 433 1555 1555 2.93 LINK CA CA B 302 O HOH B 461 1555 1555 2.70 SITE 1 AC1 8 TYR A 19 THR A 20 ASP A 21 ILE A 24 SITE 2 AC1 8 PHE A 154 HOH A 406 HOH A 407 HOH A 545 SITE 1 AC2 4 ASN A 262 THR B 30 THR B 32 ASP B 104 SITE 1 AC3 6 GLU B 250 ASP B 267 SER B 269 ASP B 271 SITE 2 AC3 6 HOH B 433 HOH B 461 SITE 1 AC4 2 VAL B 65 SER B 66 SITE 1 AC5 9 ILE B 18 TYR B 19 THR B 20 ASP B 21 SITE 2 AC5 9 ILE B 24 PHE B 154 HOH B 406 HOH B 409 SITE 3 AC5 9 HOH B 436 SITE 1 AC6 15 THR B 14 SER B 16 MET B 17 ILE B 18 SITE 2 AC6 15 PHE B 31 TYR B 67 ASN B 77 LYS B 78 SITE 3 AC6 15 GLU B 101 GLN B 110 TYR B 111 ASP B 112 SITE 4 AC6 15 PHE B 150 GLU B 151 SER B 153 SITE 1 AC7 16 GLU B 162 GLN B 164 VAL B 165 THR B 166 SITE 2 AC7 16 PHE B 176 LEU B 215 HIS B 216 HIS B 218 SITE 3 AC7 16 GLN B 219 GLU B 236 TYR B 242 THR B 243 SITE 4 AC7 16 THR B 244 VAL B 275 THR B 276 LYS B 278 CRYST1 51.772 114.968 128.711 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019315 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008698 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007769 0.00000