HEADER OXIDOREDUCTASE 24-OCT-17 6BDX TITLE 4-HYDROXY TETRAHYDRODIPICOLINATE REDUCTASE FROM NEISSERIA GONORRHOEAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: 4-HYDROXY-TETRAHYDRODIPICOLINATE REDUCTASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HTPA REDUCTASE; COMPND 5 EC: 1.17.1.8; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NEISSERIA GONORRHOEAE; SOURCE 3 ORGANISM_TAXID: 485; SOURCE 4 GENE: DAPB, WHOK_00270, WHOK_02229C, WHOM_00688, WHOM_02238C, SOURCE 5 WHOP_00630, WHOP_02238C, WHOU_00751, WHOU_02311C, WHOV_01184, SOURCE 6 WHOV_02299C, WHOW_00218, WHOW_02292C, WHOX_00871, WHOX_02228C, SOURCE 7 WHOY_00570, WHOY_02311C, WHOZ_01787, WHOZ_02300C; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_TAXID: 469008 KEYWDS LYSINE BIOSYNTHESIS, 4-HYDROXY TETRAHYDRODIPICOLINATE REDUCTASE, KEYWDS 2 NEISSERIA GONORRHOEAE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR S.S.POTE,S.E.PYE,T.E.SHEAHAN,M.CHRUSZCZ REVDAT 3 04-OCT-23 6BDX 1 REMARK REVDAT 2 12-SEP-18 6BDX 1 JRNL REVDAT 1 29-AUG-18 6BDX 0 JRNL AUTH S.POTE,S.E.PYE,T.E.SHEAHAN,A.GAWLICKA-CHRUSZCZ,K.A.MAJOREK, JRNL AUTH 2 M.CHRUSZCZ JRNL TITL 4-HYDROXY-TETRAHYDRODIPICOLINATE REDUCTASE FROM NEISSERIA JRNL TITL 2 GONORRHOEAE - STRUCTURE AND INTERACTIONS WITH COENZYMES AND JRNL TITL 3 SUBSTRATE ANALOG. JRNL REF BIOCHEM. BIOPHYS. RES. V. 503 1993 2018 JRNL REF 2 COMMUN. JRNL REFN ESSN 1090-2104 JRNL PMID 30093108 JRNL DOI 10.1016/J.BBRC.2018.07.147 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0158 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 23783 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.171 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.210 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 1173 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1715 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2160 REMARK 3 BIN FREE R VALUE SET COUNT : 82 REMARK 3 BIN FREE R VALUE : 0.2670 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1885 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 40 REMARK 3 SOLVENT ATOMS : 173 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.30000 REMARK 3 B22 (A**2) : -0.67000 REMARK 3 B33 (A**2) : -1.63000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.118 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.117 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.956 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1944 ; 0.021 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1821 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2639 ; 1.911 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4185 ; 3.833 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 258 ; 5.936 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 75 ;34.505 ;23.733 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 299 ;12.181 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;20.908 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 317 ; 0.133 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2178 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 379 ; 0.010 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1038 ; 2.338 ; 2.987 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1037 ; 2.338 ; 2.984 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1294 ; 3.259 ; 4.450 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1295 ; 3.258 ; 4.453 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 906 ; 3.844 ; 3.632 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 875 ; 3.321 ; 3.447 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1297 ; 5.203 ; 4.974 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2024 ; 7.109 ;37.012 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 1999 ; 6.968 ;36.480 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 123 REMARK 3 ORIGIN FOR THE GROUP (A): -23.4060 17.4060 31.6910 REMARK 3 T TENSOR REMARK 3 T11: 0.0081 T22: 0.0444 REMARK 3 T33: 0.0793 T12: -0.0061 REMARK 3 T13: 0.0043 T23: 0.0113 REMARK 3 L TENSOR REMARK 3 L11: 1.0967 L22: 0.7332 REMARK 3 L33: 0.6611 L12: 0.0456 REMARK 3 L13: 0.1617 L23: 0.5597 REMARK 3 S TENSOR REMARK 3 S11: -0.0194 S12: -0.0318 S13: 0.0148 REMARK 3 S21: 0.0575 S22: 0.0054 S23: 0.0062 REMARK 3 S31: 0.0178 S32: 0.0426 S33: 0.0141 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 124 A 236 REMARK 3 ORIGIN FOR THE GROUP (A): -19.0160 24.3490 0.9600 REMARK 3 T TENSOR REMARK 3 T11: 0.0094 T22: 0.0958 REMARK 3 T33: 0.0384 T12: 0.0159 REMARK 3 T13: -0.0094 T23: -0.0117 REMARK 3 L TENSOR REMARK 3 L11: 0.1854 L22: 0.3597 REMARK 3 L33: 0.8026 L12: -0.0197 REMARK 3 L13: 0.0712 L23: -0.0181 REMARK 3 S TENSOR REMARK 3 S11: 0.0169 S12: 0.0543 S13: -0.0109 REMARK 3 S21: 0.0404 S22: 0.0047 S23: -0.0285 REMARK 3 S31: 0.0474 S32: 0.1431 S33: -0.0217 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 237 A 267 REMARK 3 ORIGIN FOR THE GROUP (A): -27.4150 13.1560 18.8900 REMARK 3 T TENSOR REMARK 3 T11: 0.0255 T22: 0.0473 REMARK 3 T33: 0.0810 T12: 0.0014 REMARK 3 T13: -0.0205 T23: -0.0040 REMARK 3 L TENSOR REMARK 3 L11: 0.9462 L22: 2.1290 REMARK 3 L33: 1.2503 L12: -0.4588 REMARK 3 L13: 0.3897 L23: -0.4161 REMARK 3 S TENSOR REMARK 3 S11: 0.0265 S12: 0.1242 S13: -0.1034 REMARK 3 S21: -0.1896 S22: -0.0508 S23: 0.1364 REMARK 3 S31: -0.0519 S32: -0.0211 S33: 0.0243 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6BDX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-OCT-17. REMARK 100 THE DEPOSITION ID IS D_1000230736. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUN-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25492 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.900 REMARK 200 R MERGE (I) : 0.06100 REMARK 200 R SYM (I) : 0.06100 REMARK 200 FOR THE DATA SET : 48.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.88 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.80 REMARK 200 R MERGE FOR SHELL (I) : 0.78400 REMARK 200 R SYM FOR SHELL (I) : 0.78400 REMARK 200 FOR SHELL : 3.380 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 1ARZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M BIS-TRIS PH 6.5, 2.0 M AMMONIUM REMARK 280 SULFATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 28.90150 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 35.86150 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 69.20700 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 28.90150 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 35.86150 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 69.20700 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 28.90150 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 35.86150 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 69.20700 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 28.90150 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 35.86150 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 69.20700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 15520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 41320 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -406.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -57.80300 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 71.72300 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -1.000000 0.000000 0.000000 -57.80300 REMARK 350 BIOMT2 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 350 BIOMT1 4 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 71.72300 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 185 REMARK 465 CYS A 186 REMARK 465 ALA A 187 REMARK 465 VAL A 188 REMARK 465 TYR A 189 REMARK 465 GLY A 190 REMARK 465 ARG A 191 REMARK 465 GLU A 192 REMARK 465 ASN A 268 REMARK 465 ARG A 269 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 470 GLU A 41 CG CD OE1 OE2 REMARK 470 HIS A 159 CG ND1 CD2 CE1 NE2 REMARK 470 VAL A 161 CG1 CG2 REMARK 470 ASP A 182 CG OD1 OD2 REMARK 470 LYS A 184 CG CD CE NZ REMARK 470 ASN A 267 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 77 -118.62 -119.70 REMARK 500 ASP A 104 -166.99 -100.30 REMARK 500 LEU A 144 42.85 -100.05 REMARK 500 SER A 236 -179.73 -170.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 308 DBREF1 6BDX A 1 269 UNP A0A1D3EVW8_NEIGO DBREF2 6BDX A A0A1D3EVW8 1 269 SEQADV 6BDX GLY A 0 UNP A0A1D3EVW EXPRESSION TAG SEQRES 1 A 270 GLY MET ILE PRO LEU LYS ILE ALA ILE ALA GLY ALA ASN SEQRES 2 A 270 GLY ARG MET GLY ARG VAL LEU VAL GLU ALA VAL ASN ASN SEQRES 3 A 270 HIS PRO ASP THR VAL LEU SER GLY ALA LEU GLU HIS SER SEQRES 4 A 270 GLY SER GLU ALA LEU GLY LEU ASP ALA GLY TYR ALA VAL SEQRES 5 A 270 GLY LEU LYS THR GLY ILE ALA ILE SER ASP ASP VAL ASP SEQRES 6 A 270 ALA VAL LEU ALA GLN SER ASP VAL LEU ILE ASP PHE THR SEQRES 7 A 270 ARG PRO GLU PRO THR LEU LYS HIS LEU GLN LYS CYS VAL SEQRES 8 A 270 GLU LYS GLN VAL ASN ILE ILE ILE GLY THR THR GLY PHE SEQRES 9 A 270 ASP ASP ALA GLY LYS ALA ALA ILE ARG ALA ALA ALA GLU SEQRES 10 A 270 LYS THR GLY ILE VAL PHE ALA ALA ASN PHE SER VAL GLY SEQRES 11 A 270 VAL ASN LEU THR PHE HIS ILE LEU ASP THR VAL ALA ARG SEQRES 12 A 270 VAL LEU ASN GLU GLY TYR ASP ILE GLU ILE ILE GLU GLY SEQRES 13 A 270 HIS HIS ARG HIS LYS VAL ASP ALA PRO SER GLY THR ALA SEQRES 14 A 270 LEU ARG MET GLY GLU VAL ILE ALA GLY ALA LEU GLY ARG SEQRES 15 A 270 ASP LEU LYS GLN CYS ALA VAL TYR GLY ARG GLU GLY HIS SEQRES 16 A 270 THR GLY PRO ARG ASP PRO SER THR ILE GLY PHE ALA THR SEQRES 17 A 270 VAL ARG ALA GLY ASP ILE VAL GLY ASP HIS THR ALA LEU SEQRES 18 A 270 PHE ALA THR ASP GLY GLU ARG VAL GLU ILE THR HIS LYS SEQRES 19 A 270 ALA GLY SER ARG MET THR PHE ALA ALA GLY ALA VAL ARG SEQRES 20 A 270 ALA ALA VAL TRP VAL ASN GLY LYS THR GLY LEU TYR ASP SEQRES 21 A 270 MET GLN ASP VAL LEU GLY LEU ASN ASN ARG HET SO4 A 301 5 HET SO4 A 302 5 HET SO4 A 303 5 HET SO4 A 304 5 HET SO4 A 305 5 HET SO4 A 306 5 HET SO4 A 307 5 HET SO4 A 308 5 HETNAM SO4 SULFATE ION FORMUL 2 SO4 8(O4 S 2-) FORMUL 10 HOH *173(H2 O) HELIX 1 AA1 GLY A 13 HIS A 26 1 14 HELIX 2 AA2 ASP A 62 GLN A 69 1 8 HELIX 3 AA3 ARG A 78 GLN A 93 1 16 HELIX 4 AA4 ASP A 104 ALA A 115 1 12 HELIX 5 AA5 SER A 127 LEU A 144 1 18 HELIX 6 AA6 SER A 165 LEU A 179 1 15 HELIX 7 AA7 ARG A 237 ASN A 252 1 16 HELIX 8 AA8 ASP A 259 GLY A 265 1 7 SHEET 1 AA1 6 THR A 29 ALA A 34 0 SHEET 2 AA1 6 LEU A 4 ILE A 8 1 N ILE A 6 O VAL A 30 SHEET 3 AA1 6 VAL A 72 ASP A 75 1 O VAL A 72 N ALA A 7 SHEET 4 AA1 6 ASN A 95 ILE A 98 1 O ILE A 97 N ASP A 75 SHEET 5 AA1 6 GLY A 119 PHE A 122 1 O VAL A 121 N ILE A 98 SHEET 6 AA1 6 GLY A 256 TYR A 258 1 O TYR A 258 N ILE A 120 SHEET 1 AA2 4 THR A 202 ARG A 209 0 SHEET 2 AA2 4 ASP A 149 HIS A 156 1 N ILE A 152 O GLY A 204 SHEET 3 AA2 4 GLY A 215 THR A 223 -1 O THR A 218 N ILE A 153 SHEET 4 AA2 4 GLU A 226 ALA A 234 -1 O VAL A 228 N PHE A 221 CISPEP 1 ILE A 2 PRO A 3 0 4.44 CISPEP 2 ALA A 163 PRO A 164 0 -11.04 SITE 1 AC1 3 GLY A 13 ARG A 14 MET A 15 SITE 1 AC2 5 ASN A 12 HIS A 37 SER A 40 GLU A 41 SITE 2 AC2 5 HOH A 436 SITE 1 AC3 4 LYS A 160 SER A 165 GLY A 166 HOH A 403 SITE 1 AC4 3 LYS A 160 VAL A 161 ASP A 162 SITE 1 AC5 3 SER A 236 ARG A 237 HOH A 415 SITE 1 AC6 2 ARG A 14 ARG A 237 SITE 1 AC7 6 ASP A 61 ASP A 62 VAL A 63 ASP A 64 SITE 2 AC7 6 LYS A 88 HOH A 514 SITE 1 AC8 1 ARG A 142 CRYST1 57.803 71.723 138.414 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017300 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013943 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007225 0.00000