data_6BES # _entry.id 6BES # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.371 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6BES pdb_00006bes 10.2210/pdb6bes/pdb WWPDB D_1000230785 ? ? BMRB 30361 ? ? # _pdbx_database_related.db_name BMRB _pdbx_database_related.details 'Solution structure of de novo macrocycle design11_ss' _pdbx_database_related.db_id 30361 _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.entry_id 6BES _pdbx_database_status.recvd_initial_deposition_date 2017-10-25 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs REL _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data REL # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Shortridge, M.D.' 1 0000-0003-2825-6836 'Hosseinzadeh, P.' 2 ? 'Pardo-Avila, F.' 3 ? 'Varani, G.' 4 ? 'Baker, D.' 5 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Science _citation.journal_id_ASTM SCIEAS _citation.journal_id_CSD 0038 _citation.journal_id_ISSN 1095-9203 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 358 _citation.language ? _citation.page_first 1461 _citation.page_last 1466 _citation.title 'Comprehensive computational design of ordered peptide macrocycles.' _citation.year 2017 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1126/science.aap7577 _citation.pdbx_database_id_PubMed 29242347 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hosseinzadeh, P.' 1 ? primary 'Bhardwaj, G.' 2 ? primary 'Mulligan, V.K.' 3 ? primary 'Shortridge, M.D.' 4 ? primary 'Craven, T.W.' 5 ? primary 'Pardo-Avila, F.' 6 ? primary 'Rettie, S.A.' 7 ? primary 'Kim, D.E.' 8 ? primary 'Silva, D.A.' 9 ? primary 'Ibrahim, Y.M.' 10 ? primary 'Webb, I.K.' 11 ? primary 'Cort, J.R.' 12 ? primary 'Adkins, J.N.' 13 ? primary 'Varani, G.' 14 ? primary 'Baker, D.' 15 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description '(DAL)Q(DPR)(DCY)(DLY)DS(DTY)(DCY)P(DSN)' _entity.formula_weight 1198.327 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(D)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(DAL)Q(DPR)(DCY)(DLY)DS(DTY)(DCY)P(DSN)' _entity_poly.pdbx_seq_one_letter_code_can AQPCKDSYCPS _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DAL n 1 2 GLN n 1 3 DPR n 1 4 DCY n 1 5 DLY n 1 6 ASP n 1 7 SER n 1 8 DTY n 1 9 DCY n 1 10 PRO n 1 11 DSN n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 11 _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 6BES _struct_ref.pdbx_db_accession 6BES _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 6BES _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 11 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 6BES _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 11 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 11 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DAL 'D-peptide linking' . D-ALANINE ? 'C3 H7 N O2' 89.093 DCY 'D-peptide linking' . D-CYSTEINE ? 'C3 H7 N O2 S' 121.158 DLY 'D-peptide linking' . D-LYSINE ? 'C6 H14 N2 O2' 146.188 DPR 'D-peptide linking' . D-PROLINE ? 'C5 H9 N O2' 115.130 DSN 'D-peptide linking' . D-SERINE ? 'C3 H7 N O3' 105.093 DTY 'D-peptide linking' . D-TYROSINE ? 'C9 H11 N O3' 181.189 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.spectrometer_id _pdbx_nmr_exptl.sample_state 1 1 1 '2D 1H-1H TOCSY' 1 isotropic 2 1 1 '2D 1H-1H NOESY' 1 isotropic 3 1 1 '2D 1H-1H TOCSY' 2 isotropic 4 1 1 '2D 1H-1H NOESY' 2 isotropic # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 278 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1 _pdbx_nmr_exptl_sample_conditions.pH 5.5 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0 _pdbx_nmr_exptl_sample_conditions.details ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_err ? _pdbx_nmr_exptl_sample_conditions.ionic_strength_units 'Not defined' _pdbx_nmr_exptl_sample_conditions.label cond_1 _pdbx_nmr_exptl_sample_conditions.pH_err ? _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.pressure_err ? _pdbx_nmr_exptl_sample_conditions.temperature_err ? _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '5 mg/mL Design 11_ss, 5 % v/v [U-99% 2H] glycerol, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' _pdbx_nmr_sample_details.label 11cpp_1 _pdbx_nmr_sample_details.type solution _pdbx_nmr_sample_details.details ? # loop_ _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.type _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.details 1 DRX ? Bruker 500 ? 2 'AVANCE III' ? Bruker 800 ? # _pdbx_nmr_refine.entry_id 6BES _pdbx_nmr_refine.method 'molecular dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.entry_id 6BES _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.representative_conformer ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.entry_id 6BES _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.ordinal _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors 1 refinement GROMACS 2016.1 Abraham 2 'structure calculation' 'X-PLOR NIH' ? 'Schwieters, Kuszewski, Tjandra and Clore' 3 'chemical shift assignment' Sparky ? Goddard 4 'peak picking' Sparky ? Goddard # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6BES _exptl.crystals_number ? _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 6BES _struct.title 'Solution structure of de novo macrocycle design11_ss' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6BES _struct_keywords.text 'macrocycle, de novo, DE NOVO PROTEIN' _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A DCY 4 SG ? ? ? 1_555 A DCY 9 SG ? ? A DCY 4 A DCY 9 1_555 ? ? ? ? ? ? ? 2.032 ? ? covale1 covale both ? A DAL 1 C ? ? ? 1_555 A GLN 2 N ? ? A DAL 1 A GLN 2 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale2 covale both ? A DAL 1 N ? ? ? 1_555 A DSN 11 C ? ? A DAL 1 A DSN 11 1_555 ? ? ? ? ? ? ? 1.341 ? ? covale3 covale both ? A GLN 2 C ? ? ? 1_555 A DPR 3 N ? ? A GLN 2 A DPR 3 1_555 ? ? ? ? ? ? ? 1.334 ? ? covale4 covale both ? A DPR 3 C ? ? ? 1_555 A DCY 4 N ? ? A DPR 3 A DCY 4 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale5 covale both ? A DCY 4 C ? ? ? 1_555 A DLY 5 N ? ? A DCY 4 A DLY 5 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale6 covale both ? A DLY 5 C ? ? ? 1_555 A ASP 6 N ? ? A DLY 5 A ASP 6 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale7 covale both ? A SER 7 C ? ? ? 1_555 A DTY 8 N ? ? A SER 7 A DTY 8 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale8 covale both ? A DTY 8 C ? ? ? 1_555 A DCY 9 N ? ? A DTY 8 A DCY 9 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale9 covale both ? A DCY 9 C ? ? ? 1_555 A PRO 10 N ? ? A DCY 9 A PRO 10 1_555 ? ? ? ? ? ? ? 1.337 ? ? covale10 covale both ? A PRO 10 C ? ? ? 1_555 A DSN 11 N ? ? A PRO 10 A DSN 11 1_555 ? ? ? ? ? ? ? 1.332 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA1 _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLN A 2 ? DCY A 4 ? GLN A 2 DCY A 4 AA1 2 SER A 7 ? DCY A 9 ? SER A 7 DCY A 9 # _pdbx_struct_sheet_hbond.sheet_id AA1 _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id DCY _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 4 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id DCY _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 4 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id SER _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 7 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id SER _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 7 # _atom_sites.entry_id 6BES _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DAL 1 1 1 DAL DAL A . n A 1 2 GLN 2 2 2 GLN GLN A . n A 1 3 DPR 3 3 3 DPR DPR A . n A 1 4 DCY 4 4 4 DCY DCY A . n A 1 5 DLY 5 5 5 DLY DLY A . n A 1 6 ASP 6 6 6 ASP ASP A . n A 1 7 SER 7 7 7 SER SER A . n A 1 8 DTY 8 8 8 DTY DTY A . n A 1 9 DCY 9 9 9 DCY DCY A . n A 1 10 PRO 10 10 10 PRO PRO A . n A 1 11 DSN 11 11 11 DSN DSE A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 0 ? 1 MORE 0 ? 1 'SSA (A^2)' 1180 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2017-12-27 2 'Structure model' 1 1 2020-01-01 3 'Structure model' 1 2 2023-06-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Author supporting evidence' 2 2 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_audit_support 2 2 'Structure model' pdbx_nmr_software 3 2 'Structure model' pdbx_nmr_spectrometer 4 3 'Structure model' database_2 5 3 'Structure model' pdbx_database_status 6 3 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_pdbx_audit_support.funding_organization' 2 2 'Structure model' '_pdbx_nmr_software.name' 3 2 'Structure model' '_pdbx_nmr_spectrometer.model' 4 3 'Structure model' '_database_2.pdbx_DOI' 5 3 'Structure model' '_database_2.pdbx_database_accession' 6 3 'Structure model' '_pdbx_database_status.status_code_nmr_data' 7 3 'Structure model' '_struct_conn.pdbx_dist_value' 8 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 9 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 10 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 11 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 12 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 13 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' # loop_ _pdbx_nmr_exptl_sample.solution_id _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling 1 'Design 11_ss' 5 ? mg/mL 'natural abundance' 1 glycerol 5 ? '% v/v' '[U-99% 2H]' # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 18 OD1 A ASP 6 ? ? HG A SER 7 ? ? 1.59 2 20 N A DAL 1 ? ? O A DSN 11 ? ? 2.19 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A DCY 4 ? ? CB A DCY 4 ? ? SG A DCY 4 ? ? 126.50 114.20 12.30 1.10 N 2 2 C A GLN 2 ? ? N A DPR 3 ? ? CA A DPR 3 ? ? 128.97 119.30 9.67 1.50 Y 3 2 CB A ASP 6 ? ? CG A ASP 6 ? ? OD2 A ASP 6 ? ? 124.00 118.30 5.70 0.90 N 4 3 C A GLN 2 ? ? N A DPR 3 ? ? CA A DPR 3 ? ? 129.33 119.30 10.03 1.50 Y 5 4 CA A DCY 4 ? ? CB A DCY 4 ? ? SG A DCY 4 ? ? 123.03 114.20 8.83 1.10 N 6 4 CB A ASP 6 ? ? CG A ASP 6 ? ? OD1 A ASP 6 ? ? 128.46 118.30 10.16 0.90 N 7 4 CB A DTY 8 ? ? CG A DTY 8 ? ? CD1 A DTY 8 ? ? 117.20 121.00 -3.80 0.60 N 8 5 CB A ASP 6 ? ? CG A ASP 6 ? ? OD2 A ASP 6 ? ? 125.83 118.30 7.53 0.90 N 9 5 CB A DTY 8 ? ? CG A DTY 8 ? ? CD2 A DTY 8 ? ? 114.68 121.00 -6.32 0.60 N 10 5 C A DCY 9 ? ? N A PRO 10 ? ? CA A PRO 10 ? ? 129.50 119.30 10.20 1.50 Y 11 7 CA A DCY 4 ? ? CB A DCY 4 ? ? SG A DCY 4 ? ? 130.93 114.20 16.73 1.10 N 12 7 N A PRO 10 ? ? CA A PRO 10 ? ? CB A PRO 10 ? ? 111.00 103.30 7.70 1.20 N 13 8 C A GLN 2 ? ? N A DPR 3 ? ? CA A DPR 3 ? ? 128.54 119.30 9.24 1.50 Y 14 8 N A DPR 3 ? ? CA A DPR 3 ? ? CB A DPR 3 ? ? 110.57 103.30 7.27 1.20 N 15 8 CB A DTY 8 ? ? CG A DTY 8 ? ? CD2 A DTY 8 ? ? 116.32 121.00 -4.68 0.60 N 16 9 CB A DTY 8 ? ? CG A DTY 8 ? ? CD1 A DTY 8 ? ? 117.33 121.00 -3.67 0.60 N 17 10 N A DAL 1 ? ? CA A DAL 1 ? ? CB A DAL 1 ? ? 101.31 110.10 -8.79 1.40 N 18 10 C A GLN 2 ? ? N A DPR 3 ? ? CA A DPR 3 ? ? 128.62 119.30 9.32 1.50 Y 19 10 CB A ASP 6 ? ? CG A ASP 6 ? ? OD2 A ASP 6 ? ? 123.75 118.30 5.45 0.90 N 20 11 CB A ASP 6 ? ? CG A ASP 6 ? ? OD2 A ASP 6 ? ? 124.17 118.30 5.87 0.90 N 21 12 CA A DCY 9 ? ? CB A DCY 9 ? ? SG A DCY 9 ? ? 127.70 114.20 13.50 1.10 N 22 13 N A DAL 1 ? ? CA A DAL 1 ? ? CB A DAL 1 ? ? 100.48 110.10 -9.62 1.40 N 23 14 CB A DTY 8 ? ? CG A DTY 8 ? ? CD2 A DTY 8 ? ? 124.61 121.00 3.61 0.60 N 24 15 CB A ASP 6 ? ? CG A ASP 6 ? ? OD2 A ASP 6 ? ? 124.11 118.30 5.81 0.90 N 25 18 N A DAL 1 ? ? CA A DAL 1 ? ? CB A DAL 1 ? ? 101.02 110.10 -9.08 1.40 N 26 18 N A DPR 3 ? ? CA A DPR 3 ? ? CB A DPR 3 ? ? 112.58 103.30 9.28 1.20 N 27 19 CB A ASP 6 ? ? CG A ASP 6 ? ? OD1 A ASP 6 ? ? 132.21 118.30 13.91 0.90 N 28 19 CB A DTY 8 ? ? CG A DTY 8 ? ? CD1 A DTY 8 ? ? 116.08 121.00 -4.92 0.60 N 29 20 CB A DTY 8 ? ? CG A DTY 8 ? ? CD2 A DTY 8 ? ? 116.34 121.00 -4.66 0.60 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 5 DLY A 5 ? ? 54.13 -104.41 2 5 DCY A 9 ? ? 112.92 -76.25 3 8 DCY A 9 ? ? 115.51 -72.88 4 10 DLY A 5 ? ? 58.96 -107.75 5 11 DLY A 5 ? ? 46.90 -104.78 6 20 DLY A 5 ? ? 51.10 -88.90 # _pdbx_audit_support.funding_organization 'Department of Health & Human Services (HHS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number 5R01GM103834 _pdbx_audit_support.ordinal 1 # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support none _pdbx_struct_assembly_auth_evidence.details ? #