HEADER MOTOR PROTEIN 02-NOV-17 6BIH TITLE THE STRUCTURE OF THE ACTIN-SMOOTH MUSCLE MYOSIN MOTOR DOMAIN COMPLEX TITLE 2 IN THE RIGOR STATE CAVEAT 6BIH ENTRY CONTAINS IMPROPER PEPTIDE LINKAGES. RESIDUES LYS H CAVEAT 2 6BIH 368, LYS H 369, GLU H 370, ARG H 371, ASN H 372, AND GLN H CAVEAT 3 6BIH 375 ARE INCORRECTLY MODELED. COMPND MOL_ID: 1; COMPND 2 MOLECULE: MYOSIN-11; COMPND 3 CHAIN: H; COMPND 4 SYNONYM: MYOSIN HEAVY CHAIN 11, MYOSIN HEAVY CHAIN, GIZZARD SMOOTH COMPND 5 MUSCLE; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: ACTIN, ALPHA SKELETAL MUSCLE; COMPND 9 CHAIN: C; COMPND 10 SYNONYM: ALPHA-ACTIN-1 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: CHICKEN; SOURCE 4 ORGANISM_TAXID: 9031; SOURCE 5 TISSUE: SKELETAL MUSCLE; SOURCE 6 GENE: MYH11; SOURCE 7 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 8 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; SOURCE 12 ORGANISM_COMMON: RABBIT; SOURCE 13 ORGANISM_TAXID: 9986 KEYWDS ADP-F-ACTIN, APO-MYOSIN, HELIX MUSCLE, MOTOR PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR K.A.TAYLOR,C.BANERJEE,Z.HU REVDAT 4 13-MAR-24 6BIH 1 REMARK REVDAT 3 04-DEC-19 6BIH 1 REMARK REVDAT 2 17-OCT-18 6BIH 1 COMPND REMARK HET HETNAM REVDAT 2 2 1 FORMUL LINK ATOM REVDAT 1 19-SEP-18 6BIH 0 JRNL AUTH C.BANERJEE,Z.HU,Z.HUANG,J.A.WARRINGTON,D.W.TAYLOR, JRNL AUTH 2 K.M.TRYBUS,S.LOWEY,K.A.TAYLOR JRNL TITL THE STRUCTURE OF THE ACTIN-SMOOTH MUSCLE MYOSIN MOTOR DOMAIN JRNL TITL 2 COMPLEX IN THE RIGOR STATE. JRNL REF J. STRUCT. BIOL. V. 200 325 2017 JRNL REFN ESSN 1095-8657 JRNL PMID 29038012 JRNL DOI 10.1016/J.JSB.2017.10.003 REMARK 2 REMARK 2 RESOLUTION. 6.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : LEGINON, CTFFIND, ROSETTA, ROSETTA, REMARK 3 RELION, RELION, RELION, RELION REMARK 3 RECONSTRUCTION SCHEMA : EXACT BACK PROJECTION REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : REAL REMARK 3 REFINEMENT PROTOCOL : FLEXIBLE FIT REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : 390.860 REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 6.000 REMARK 3 NUMBER OF PARTICLES : 85000 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING ONLY REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6BIH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-NOV-17. REMARK 100 THE DEPOSITION ID IS D_1000225904. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : HELICAL REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : FILAMENT REMARK 245 PARTICLE TYPE : HELICAL REMARK 245 NAME OF SAMPLE : FILAMENTOUS MUSCLE ALPHA-ACTIN REMARK 245 DECORATED WITH THE MOTOR DOMAIN REMARK 245 OF RECOMBINANT SMOOTH MUSCLE REMARK 245 MYOSIN II MOTOR DOMAIN REMARK 245 EXPRESSED IN SF9 CELLS; ALPHA- REMARK 245 ACTIN; MYOSIN II REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : 0.10 REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : SOME SPECIMENS WERE FROZEN REMARK 245 MANUALLY USING A HOMEMADE REMARK 245 PLUNGER. REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : 4000 REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : DIRECT ELECTRON DE-20 (5K X REMARK 245 3K) REMARK 245 MINIMUM DEFOCUS (NM) : 2200.00 REMARK 245 MAXIMUM DEFOCUS (NM) : 5000.00 REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 6000.00 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 THE ASSEMBLY REPRESENTED IN THIS ENTRY HAS REGULAR REMARK 300 HELICAL SYMMETRY WITH THE FOLLOWING PARAMETERS: REMARK 300 ROTATION PER SUBUNIT (TWIST) = -166.78 DEGREES REMARK 300 RISE PER SUBUNIT (HEIGHT) = 28.19 ANGSTROMS REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 APPLY THE FOLLOWING TO CHAINS: H, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.769822 -0.638258 0.000000 453.70400 REMARK 350 BIOMT2 2 0.638258 -0.769822 0.000000 211.25500 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 -84.56060 REMARK 350 BIOMT1 3 0.895390 0.445282 0.000000 -63.71670 REMARK 350 BIOMT2 3 -0.445282 0.895390 0.000000 103.65900 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 -56.37370 REMARK 350 BIOMT1 4 -0.973496 -0.228702 0.000000 415.38300 REMARK 350 BIOMT2 4 0.228702 -0.973496 0.000000 326.73800 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 -28.18680 REMARK 350 BIOMT1 5 -0.973496 0.228702 0.000000 329.64800 REMARK 350 BIOMT2 5 -0.228702 -0.973496 0.000000 413.07800 REMARK 350 BIOMT3 5 0.000000 0.000000 1.000000 28.18680 REMARK 350 BIOMT1 6 0.895390 -0.445282 0.000000 103.20900 REMARK 350 BIOMT2 6 0.445282 0.895390 0.000000 -64.44330 REMARK 350 BIOMT3 6 0.000000 0.000000 1.000000 56.37370 REMARK 350 BIOMT1 7 -0.769822 0.638258 0.000000 214.43700 REMARK 350 BIOMT2 7 -0.638258 -0.769822 0.000000 452.20900 REMARK 350 BIOMT3 7 0.000000 0.000000 1.000000 84.56060 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET H 1 REMARK 465 TRP H 36 REMARK 465 VAL H 37 REMARK 465 PRO H 38 REMARK 465 SER H 39 REMARK 465 GLU H 40 REMARK 465 LYS H 41 REMARK 465 SER H 200 REMARK 465 HIS H 201 REMARK 465 LYS H 202 REMARK 465 GLY H 203 REMARK 465 LYS H 204 REMARK 465 LYS H 205 REMARK 465 ASP H 206 REMARK 465 THR H 207 REMARK 465 SER H 208 REMARK 465 ILE H 209 REMARK 465 THR H 210 REMARK 465 GLN H 211 REMARK 465 GLY H 212 REMARK 465 PRO H 213 REMARK 465 SER H 214 REMARK 465 PHE H 215 REMARK 465 SER H 216 REMARK 465 TYR H 217 REMARK 465 ASP H 629 REMARK 465 ARG H 630 REMARK 465 ILE H 631 REMARK 465 VAL H 632 REMARK 465 GLY H 633 REMARK 465 LEU H 634 REMARK 465 ASP H 635 REMARK 465 GLN H 636 REMARK 465 MET H 637 REMARK 465 ALA H 638 REMARK 465 LYS H 639 REMARK 465 MET H 640 REMARK 465 THR H 641 REMARK 465 GLU H 642 REMARK 465 SER H 643 REMARK 465 SER H 644 REMARK 465 LEU H 645 REMARK 465 PRO H 646 REMARK 465 SER H 647 REMARK 465 ALA H 648 REMARK 465 SER H 649 REMARK 465 LYS H 650 REMARK 465 THR H 651 REMARK 465 LYS H 652 REMARK 465 LYS H 653 REMARK 465 GLY H 654 REMARK 465 LEU H 781 REMARK 465 ALA H 782 REMARK 465 HIS H 783 REMARK 465 LEU H 784 REMARK 465 GLU H 785 REMARK 465 GLU H 786 REMARK 465 GLU H 787 REMARK 465 ARG H 788 REMARK 465 ASP H 789 REMARK 465 LEU H 790 REMARK 465 ASP H 791 REMARK 465 TYR H 792 REMARK 465 LYS H 793 REMARK 465 ASP H 794 REMARK 465 ASP H 795 REMARK 465 ASP H 796 REMARK 465 ASP H 797 REMARK 465 LYS H 798 REMARK 465 MET C -1 REMARK 465 CYS C 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER H 2 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HG21 THR H 373 CG2 THR H 419 0.36 REMARK 500 HZ3 LYS H 368 CD PRO H 379 0.44 REMARK 500 CG2 THR H 373 HG22 THR H 419 0.61 REMARK 500 HZ2 LYS H 368 CG PRO H 379 0.67 REMARK 500 NZ LYS H 368 CD PRO H 379 0.74 REMARK 500 HZ1 LYS H 368 N PRO H 379 0.79 REMARK 500 HG23 THR H 373 CB THR H 419 0.79 REMARK 500 CG2 THR H 373 CG2 THR H 419 0.80 REMARK 500 HG21 THR H 373 HG23 THR H 419 0.81 REMARK 500 HG22 THR H 373 HG22 THR H 419 0.82 REMARK 500 HB3 ASP H 374 HB3 LYS H 420 0.83 REMARK 500 HZ2 LYS H 368 HG3 PRO H 379 0.84 REMARK 500 CE LYS H 368 HD3 PRO H 379 0.85 REMARK 500 HD2 PHE H 367 HB1 ALA H 376 0.88 REMARK 500 HZ3 LYS H 368 HD2 PRO H 379 0.93 REMARK 500 HG23 THR H 373 HB THR H 419 0.98 REMARK 500 HG2 LYS H 368 C SER H 377 1.01 REMARK 500 CB LYS H 368 HB3 SER H 377 1.06 REMARK 500 CG LYS H 368 HB3 SER H 377 1.06 REMARK 500 HG21 THR H 373 HG22 THR H 419 1.07 REMARK 500 HD3 LYS H 368 HA PRO H 379 1.08 REMARK 500 HG2 LYS H 368 CA SER H 377 1.19 REMARK 500 HE2 LYS H 368 N MET H 378 1.21 REMARK 500 NZ LYS H 368 N PRO H 379 1.22 REMARK 500 CD LYS H 368 HD3 PRO H 379 1.23 REMARK 500 HZ1 LYS H 368 CA PRO H 379 1.25 REMARK 500 CG LYS H 368 CB SER H 377 1.25 REMARK 500 HG23 THR H 373 CG2 THR H 419 1.28 REMARK 500 HG21 THR H 373 HG21 THR H 419 1.28 REMARK 500 NZ LYS H 368 HD3 PRO H 379 1.30 REMARK 500 HG2 LYS H 368 O SER H 377 1.34 REMARK 500 OD1 ASP H 374 H ALA H 376 1.35 REMARK 500 HZ3 LYS H 368 N PRO H 379 1.36 REMARK 500 HZ2 LYS H 368 CD PRO H 379 1.36 REMARK 500 NZ LYS H 368 CG PRO H 379 1.36 REMARK 500 OG1 THR H 373 HG21 THR H 419 1.42 REMARK 500 CB THR H 373 HG22 THR H 419 1.46 REMARK 500 HG2 GLN H 375 O ALA H 376 1.48 REMARK 500 HE2 LYS H 368 CA MET H 378 1.50 REMARK 500 CG LYS H 368 CA SER H 377 1.51 REMARK 500 CD2 PHE H 367 HB1 ALA H 376 1.52 REMARK 500 O CYS C 257 HG1 THR C 260 1.52 REMARK 500 HZ1 LYS H 368 CD PRO H 379 1.56 REMARK 500 CG2 THR H 373 CB THR H 419 1.56 REMARK 500 HZ3 LYS H 368 CG PRO H 379 1.57 REMARK 500 CG2 THR H 373 HG21 THR H 419 1.58 REMARK 500 HG22 THR H 373 CG2 THR H 419 1.59 REMARK 500 CE LYS H 368 CD PRO H 379 1.64 REMARK 500 CG LYS H 368 C SER H 377 1.70 REMARK 500 CB THR H 373 CG2 THR H 419 1.89 REMARK 500 REMARK 500 THIS ENTRY HAS 60 CLOSE CONTACTS REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 ILE H 528 C GLU H 529 N -0.327 REMARK 500 GLY H 536 C VAL H 537 N -0.211 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO H 23 C - N - CA ANGL. DEV. = 9.5 DEGREES REMARK 500 PRO H 81 C - N - CA ANGL. DEV. = 10.2 DEGREES REMARK 500 PRO H 131 C - N - CA ANGL. DEV. = 10.3 DEGREES REMARK 500 ARG H 285 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 THR H 373 N - CA - C ANGL. DEV. = -19.0 DEGREES REMARK 500 GLN H 375 N - CA - C ANGL. DEV. = -20.9 DEGREES REMARK 500 PRO H 548 C - N - CA ANGL. DEV. = 9.7 DEGREES REMARK 500 PRO H 764 C - N - CA ANGL. DEV. = 9.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU H 13 -66.02 -132.85 REMARK 500 LYS H 17 -152.46 -136.84 REMARK 500 PHE H 19 52.24 -116.70 REMARK 500 LYS H 33 79.93 -67.18 REMARK 500 LEU H 95 71.29 -69.76 REMARK 500 TYR H 133 23.08 -163.73 REMARK 500 LYS H 142 106.48 -59.58 REMARK 500 ARG H 146 -87.06 32.85 REMARK 500 HIS H 152 147.16 -173.76 REMARK 500 ARG H 247 45.15 -96.65 REMARK 500 THR H 286 -164.82 -70.14 REMARK 500 ASN H 318 144.71 145.05 REMARK 500 ALA H 376 -166.35 109.12 REMARK 500 SER H 377 146.92 -172.98 REMARK 500 GLN H 415 89.42 -60.24 REMARK 500 THR H 453 -79.39 -56.82 REMARK 500 ARG H 455 148.45 -179.54 REMARK 500 SER H 476 -165.09 -118.50 REMARK 500 PHE H 514 -117.29 56.06 REMARK 500 PRO H 531 -93.68 -92.54 REMARK 500 ASN H 533 176.44 67.34 REMARK 500 GLN H 574 -36.75 -34.05 REMARK 500 THR H 579 -69.77 -155.95 REMARK 500 ALA H 596 34.02 -142.80 REMARK 500 MET H 602 -113.14 -117.05 REMARK 500 ASP H 603 45.94 85.30 REMARK 500 PRO H 604 59.34 -57.90 REMARK 500 PHE H 656 -75.39 65.54 REMARK 500 ARG H 657 -152.28 42.86 REMARK 500 ARG H 724 108.29 -18.41 REMARK 500 ALA H 738 50.53 105.56 REMARK 500 ASN H 740 -117.86 54.39 REMARK 500 PRO H 743 -155.87 -81.07 REMARK 500 LYS H 744 37.34 -84.63 REMARK 500 GLU C 2 -84.30 50.68 REMARK 500 THR C 5 -80.62 -73.06 REMARK 500 THR C 6 103.40 55.82 REMARK 500 SER C 33 67.33 -69.30 REMARK 500 GLN C 41 155.33 74.63 REMARK 500 GLU C 100 -64.33 -173.61 REMARK 500 LEU C 110 65.73 61.41 REMARK 500 GLU C 125 -45.28 -145.11 REMARK 500 ASN C 128 103.88 4.63 REMARK 500 GLN C 137 -76.66 -13.75 REMARK 500 PRO C 172 68.43 -62.94 REMARK 500 HIS C 173 -25.58 175.47 REMARK 500 LEU C 180 64.94 -153.85 REMARK 500 LEU C 216 -44.11 -130.73 REMARK 500 CYS C 217 110.07 -38.67 REMARK 500 SER C 232 80.81 -55.92 REMARK 500 REMARK 500 THIS ENTRY HAS 56 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 ILE H 528 -14.12 REMARK 500 GLY H 536 -10.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 154 OD1 REMARK 620 2 SER C 300 OG 78.7 REMARK 620 3 SER C 338 OG 141.4 67.1 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-7100 RELATED DB: EMDB REMARK 900 THE STRUCTURE OF THE ACTIN-SMOOTH MUSCLE MYOSIN MOTOR DOMAIN REMARK 900 COMPLEX IN THE RIGOR STATE DBREF 6BIH H 1 790 UNP P10587 MYH11_CHICK 1 790 DBREF 6BIH C -1 375 UNP P68135 ACTS_RABIT 1 377 SEQADV 6BIH ASP H 791 UNP P10587 EXPRESSION TAG SEQADV 6BIH TYR H 792 UNP P10587 EXPRESSION TAG SEQADV 6BIH LYS H 793 UNP P10587 EXPRESSION TAG SEQADV 6BIH ASP H 794 UNP P10587 EXPRESSION TAG SEQADV 6BIH ASP H 795 UNP P10587 EXPRESSION TAG SEQADV 6BIH ASP H 796 UNP P10587 EXPRESSION TAG SEQADV 6BIH ASP H 797 UNP P10587 EXPRESSION TAG SEQADV 6BIH LYS H 798 UNP P10587 EXPRESSION TAG SEQRES 1 H 798 MET SER GLN LYS PRO LEU SER ASP ASP GLU LYS PHE LEU SEQRES 2 H 798 PHE VAL ASP LYS ASN PHE VAL ASN ASN PRO LEU ALA GLN SEQRES 3 H 798 ALA ASP TRP SER ALA LYS LYS LEU VAL TRP VAL PRO SER SEQRES 4 H 798 GLU LYS HIS GLY PHE GLU ALA ALA SER ILE LYS GLU GLU SEQRES 5 H 798 LYS GLY ASP GLU VAL THR VAL GLU LEU GLN GLU ASN GLY SEQRES 6 H 798 LYS LYS VAL THR LEU SER LYS ASP ASP ILE GLN LYS MET SEQRES 7 H 798 ASN PRO PRO LYS PHE SER LYS VAL GLU ASP MET ALA GLU SEQRES 8 H 798 LEU THR CYS LEU ASN GLU ALA SER VAL LEU HIS ASN LEU SEQRES 9 H 798 ARG GLU ARG TYR PHE SER GLY LEU ILE TYR THR TYR SER SEQRES 10 H 798 GLY LEU PHE CYS VAL VAL ILE ASN PRO TYR LYS GLN LEU SEQRES 11 H 798 PRO ILE TYR SER GLU LYS ILE ILE ASP MET TYR LYS GLY SEQRES 12 H 798 LYS LYS ARG HIS GLU MET PRO PRO HIS ILE TYR ALA ILE SEQRES 13 H 798 ALA ASP THR ALA TYR ARG SER MET LEU GLN ASP ARG GLU SEQRES 14 H 798 ASP GLN SER ILE LEU CYS THR GLY GLU SER GLY ALA GLY SEQRES 15 H 798 LYS THR GLU ASN THR LYS LYS VAL ILE GLN TYR LEU ALA SEQRES 16 H 798 VAL VAL ALA SER SER HIS LYS GLY LYS LYS ASP THR SER SEQRES 17 H 798 ILE THR GLN GLY PRO SER PHE SER TYR GLY GLU LEU GLU SEQRES 18 H 798 LYS GLN LEU LEU GLN ALA ASN PRO ILE LEU GLU ALA PHE SEQRES 19 H 798 GLY ASN ALA LYS THR VAL LYS ASN ASP ASN SER SER ARG SEQRES 20 H 798 PHE GLY LYS PHE ILE ARG ILE ASN PHE ASP VAL THR GLY SEQRES 21 H 798 TYR ILE VAL GLY ALA ASN ILE GLU THR TYR LEU LEU GLU SEQRES 22 H 798 LYS SER ARG ALA ILE ARG GLN ALA LYS ASP GLU ARG THR SEQRES 23 H 798 PHE HIS ILE PHE TYR TYR LEU ILE ALA GLY ALA SER GLU SEQRES 24 H 798 GLN MET ARG ASN ASP LEU LEU LEU GLU GLY PHE ASN ASN SEQRES 25 H 798 TYR THR PHE LEU SER ASN GLY HIS VAL PRO ILE PRO ALA SEQRES 26 H 798 GLN GLN ASP ASP GLU MET PHE GLN GLU THR LEU GLU ALA SEQRES 27 H 798 MET THR ILE MET GLY PHE THR GLU GLU GLU GLN THR SER SEQRES 28 H 798 ILE LEU ARG VAL VAL SER SER VAL LEU GLN LEU GLY ASN SEQRES 29 H 798 ILE VAL PHE LYS LYS GLU ARG ASN THR ASP GLN ALA SER SEQRES 30 H 798 MET PRO ASP ASN THR ALA ALA GLN LYS VAL CYS HIS LEU SEQRES 31 H 798 MET GLY ILE ASN VAL THR ASP PHE THR ARG SER ILE LEU SEQRES 32 H 798 THR PRO ARG ILE LYS VAL GLY ARG ASP VAL VAL GLN LYS SEQRES 33 H 798 ALA GLN THR LYS GLU GLN ALA ASP PHE ALA ILE GLU ALA SEQRES 34 H 798 LEU ALA LYS ALA LYS PHE GLU ARG LEU PHE ARG TRP ILE SEQRES 35 H 798 LEU THR ARG VAL ASN LYS ALA LEU ASP LYS THR LYS ARG SEQRES 36 H 798 GLN GLY ALA SER PHE LEU GLY ILE LEU ASP ILE ALA GLY SEQRES 37 H 798 PHE GLU ILE PHE GLU ILE ASN SER PHE GLU GLN LEU CYS SEQRES 38 H 798 ILE ASN TYR THR ASN GLU LYS LEU GLN GLN LEU PHE ASN SEQRES 39 H 798 HIS THR MET PHE ILE LEU GLU GLN GLU GLU TYR GLN ARG SEQRES 40 H 798 GLU GLY ILE GLU TRP ASN PHE ILE ASP PHE GLY LEU ASP SEQRES 41 H 798 LEU GLN PRO CYS ILE GLU LEU ILE GLU ARG PRO THR ASN SEQRES 42 H 798 PRO PRO GLY VAL LEU ALA LEU LEU ASP GLU GLU CYS TRP SEQRES 43 H 798 PHE PRO LYS ALA THR ASP THR SER PHE VAL GLU LYS LEU SEQRES 44 H 798 ILE GLN GLU GLN GLY ASN HIS ALA LYS PHE GLN LYS SER SEQRES 45 H 798 LYS GLN LEU LYS ASP LYS THR GLU PHE CYS ILE LEU HIS SEQRES 46 H 798 TYR ALA GLY LYS VAL THR TYR ASN ALA SER ALA TRP LEU SEQRES 47 H 798 THR LYS ASN MET ASP PRO LEU ASN ASP ASN VAL THR SER SEQRES 48 H 798 LEU LEU ASN GLN SER SER ASP LYS PHE VAL ALA ASP LEU SEQRES 49 H 798 TRP LYS ASP VAL ASP ARG ILE VAL GLY LEU ASP GLN MET SEQRES 50 H 798 ALA LYS MET THR GLU SER SER LEU PRO SER ALA SER LYS SEQRES 51 H 798 THR LYS LYS GLY MET PHE ARG THR VAL GLY GLN LEU TYR SEQRES 52 H 798 LYS GLU GLN LEU THR LYS LEU MET THR THR LEU ARG ASN SEQRES 53 H 798 THR ASN PRO ASN PHE VAL ARG CYS ILE ILE PRO ASN HIS SEQRES 54 H 798 GLU LYS ARG ALA GLY LYS LEU ASP ALA HIS LEU VAL LEU SEQRES 55 H 798 GLU GLN LEU ARG CYS ASN GLY VAL LEU GLU GLY ILE ARG SEQRES 56 H 798 ILE CYS ARG GLN GLY PHE PRO ASN ARG ILE VAL PHE GLN SEQRES 57 H 798 GLU PHE ARG GLN ARG TYR GLU ILE LEU ALA ALA ASN ALA SEQRES 58 H 798 ILE PRO LYS GLY PHE MET ASP GLY LYS GLN ALA CYS ILE SEQRES 59 H 798 LEU MET ILE LYS ALA LEU GLU LEU ASP PRO ASN LEU TYR SEQRES 60 H 798 ARG ILE GLY GLN SER LYS ILE PHE PHE ARG THR GLY VAL SEQRES 61 H 798 LEU ALA HIS LEU GLU GLU GLU ARG ASP LEU ASP TYR LYS SEQRES 62 H 798 ASP ASP ASP ASP LYS SEQRES 1 C 377 MET CYS ASP GLU ASP GLU THR THR ALA LEU VAL CYS ASP SEQRES 2 C 377 ASN GLY SER GLY LEU VAL LYS ALA GLY PHE ALA GLY ASP SEQRES 3 C 377 ASP ALA PRO ARG ALA VAL PHE PRO SER ILE VAL GLY ARG SEQRES 4 C 377 PRO ARG HIS GLN GLY VAL MET VAL GLY MET GLY GLN LYS SEQRES 5 C 377 ASP SER TYR VAL GLY ASP GLU ALA GLN SER LYS ARG GLY SEQRES 6 C 377 ILE LEU THR LEU LYS TYR PRO ILE GLU HIS GLY ILE ILE SEQRES 7 C 377 THR ASN TRP ASP ASP MET GLU LYS ILE TRP HIS HIS THR SEQRES 8 C 377 PHE TYR ASN GLU LEU ARG VAL ALA PRO GLU GLU HIS PRO SEQRES 9 C 377 THR LEU LEU THR GLU ALA PRO LEU ASN PRO LYS ALA ASN SEQRES 10 C 377 ARG GLU LYS MET THR GLN ILE MET PHE GLU THR PHE ASN SEQRES 11 C 377 VAL PRO ALA MET TYR VAL ALA ILE GLN ALA VAL LEU SER SEQRES 12 C 377 LEU TYR ALA SER GLY ARG THR THR GLY ILE VAL LEU ASP SEQRES 13 C 377 SER GLY ASP GLY VAL THR HIS ASN VAL PRO ILE TYR GLU SEQRES 14 C 377 GLY TYR ALA LEU PRO HIS ALA ILE MET ARG LEU ASP LEU SEQRES 15 C 377 ALA GLY ARG ASP LEU THR ASP TYR LEU MET LYS ILE LEU SEQRES 16 C 377 THR GLU ARG GLY TYR SER PHE VAL THR THR ALA GLU ARG SEQRES 17 C 377 GLU ILE VAL ARG ASP ILE LYS GLU LYS LEU CYS TYR VAL SEQRES 18 C 377 ALA LEU ASP PHE GLU ASN GLU MET ALA THR ALA ALA SER SEQRES 19 C 377 SER SER SER LEU GLU LYS SER TYR GLU LEU PRO ASP GLY SEQRES 20 C 377 GLN VAL ILE THR ILE GLY ASN GLU ARG PHE ARG CYS PRO SEQRES 21 C 377 GLU THR LEU PHE GLN PRO SER PHE ILE GLY MET GLU SER SEQRES 22 C 377 ALA GLY ILE HIS GLU THR THR TYR ASN SER ILE MET LYS SEQRES 23 C 377 CYS ASP ILE ASP ILE ARG LYS ASP LEU TYR ALA ASN ASN SEQRES 24 C 377 VAL MET SER GLY GLY THR THR MET TYR PRO GLY ILE ALA SEQRES 25 C 377 ASP ARG MET GLN LYS GLU ILE THR ALA LEU ALA PRO SER SEQRES 26 C 377 THR MET LYS ILE LYS ILE ILE ALA PRO PRO GLU ARG LYS SEQRES 27 C 377 TYR SER VAL TRP ILE GLY GLY SER ILE LEU ALA SER LEU SEQRES 28 C 377 SER THR PHE GLN GLN MET TRP ILE THR LYS GLN GLU TYR SEQRES 29 C 377 ASP GLU ALA GLY PRO SER ILE VAL HIS ARG LYS CYS PHE HET ADP C 401 27 HET MG C 402 1 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 3 ADP C10 H15 N5 O10 P2 FORMUL 4 MG MG 2+ HELIX 1 AA1 SER H 7 PHE H 12 1 6 HELIX 2 AA2 ASP H 73 ILE H 75 5 3 HELIX 3 AA3 PRO H 80 SER H 84 5 5 HELIX 4 AA4 ASP H 88 LEU H 92 5 5 HELIX 5 AA5 ASN H 96 SER H 110 1 15 HELIX 6 AA6 SER H 134 LYS H 142 1 9 HELIX 7 AA7 LYS H 145 MET H 149 5 5 HELIX 8 AA8 HIS H 152 GLN H 166 1 15 HELIX 9 AA9 GLY H 182 ALA H 198 1 17 HELIX 10 AB1 LEU H 220 PHE H 234 1 15 HELIX 11 AB2 GLU H 273 ILE H 278 5 6 HELIX 12 AB3 HIS H 288 ALA H 297 1 10 HELIX 13 AB4 SER H 298 LEU H 306 1 9 HELIX 14 AB5 GLY H 309 TYR H 313 5 5 HELIX 15 AB6 GLN H 327 GLY H 343 1 17 HELIX 16 AB7 THR H 345 ASN H 364 1 20 HELIX 17 AB8 ASN H 381 GLY H 392 1 12 HELIX 18 AB9 ASN H 394 THR H 404 1 11 HELIX 19 AC1 THR H 419 ASP H 451 1 33 HELIX 20 AC2 SER H 476 GLU H 508 1 33 HELIX 21 AC3 ASP H 516 ASP H 520 5 5 HELIX 22 AC4 LEU H 521 ARG H 530 1 10 HELIX 23 AC5 GLY H 536 CYS H 545 1 10 HELIX 24 AC6 THR H 551 GLN H 563 1 13 HELIX 25 AC7 GLY H 564 HIS H 566 5 3 HELIX 26 AC8 LEU H 575 THR H 579 5 5 HELIX 27 AC9 ALA H 596 LYS H 600 5 5 HELIX 28 AD1 ASN H 606 GLN H 615 1 10 HELIX 29 AD2 ASP H 618 TRP H 625 1 8 HELIX 30 AD3 THR H 658 ASN H 676 1 19 HELIX 31 AD4 ASP H 697 ASN H 708 1 12 HELIX 32 AD5 GLY H 709 GLN H 719 1 11 HELIX 33 AD6 PHE H 727 GLU H 735 1 9 HELIX 34 AD7 ASP H 748 GLU H 761 1 14 HELIX 35 AD8 GLY C 55 LYS C 61 1 7 HELIX 36 AD9 ASN C 78 TYR C 91 1 14 HELIX 37 AE1 PRO C 112 PHE C 124 1 13 HELIX 38 AE2 GLN C 137 SER C 145 1 9 HELIX 39 AE3 ALA C 181 GLY C 197 1 17 HELIX 40 AE4 THR C 202 CYS C 217 1 16 HELIX 41 AE5 ASP C 222 ALA C 230 1 9 HELIX 42 AE6 GLY C 251 PHE C 255 5 5 HELIX 43 AE7 ARG C 256 GLN C 263 1 8 HELIX 44 AE8 PRO C 264 ILE C 267 5 4 HELIX 45 AE9 GLY C 273 MET C 283 1 11 HELIX 46 AF1 ASP C 286 ASN C 296 1 11 HELIX 47 AF2 GLY C 301 MET C 305 5 5 HELIX 48 AF3 GLY C 308 LEU C 320 1 13 HELIX 49 AF4 TYR C 337 LEU C 349 1 13 HELIX 50 AF5 SER C 350 MET C 355 5 6 HELIX 51 AF6 LYS C 359 GLY C 366 1 8 HELIX 52 AF7 SER C 368 CYS C 374 1 7 SHEET 1 AA1 4 LEU H 34 VAL H 35 0 SHEET 2 AA1 4 ALA H 47 LYS H 53 -1 O ALA H 47 N VAL H 35 SHEET 3 AA1 4 GLU H 56 LEU H 61 -1 O THR H 58 N GLU H 51 SHEET 4 AA1 4 LYS H 66 SER H 71 -1 O LYS H 66 N LEU H 61 SHEET 1 AA2 7 TYR H 114 SER H 117 0 SHEET 2 AA2 7 PHE H 120 ILE H 124 -1 O VAL H 122 N THR H 115 SHEET 3 AA2 7 ASN H 678 ILE H 685 1 O ARG H 683 N VAL H 123 SHEET 4 AA2 7 GLN H 171 GLY H 177 1 N LEU H 174 O ASN H 680 SHEET 5 AA2 7 SER H 459 ALA H 467 1 O LEU H 464 N ILE H 173 SHEET 6 AA2 7 GLY H 249 ASP H 257 -1 N LYS H 250 O ASP H 465 SHEET 7 AA2 7 TYR H 261 TYR H 270 -1 O TYR H 261 N ASP H 257 SHEET 1 AA3 2 ASN H 236 ALA H 237 0 SHEET 2 AA3 2 SER H 245 SER H 246 -1 O SER H 245 N ALA H 237 SHEET 1 AA4 2 ARG H 406 LYS H 408 0 SHEET 2 AA4 2 VAL H 413 GLN H 415 -1 O VAL H 414 N ILE H 407 SHEET 1 AA5 3 PHE H 569 GLN H 570 0 SHEET 2 AA5 3 PHE H 581 HIS H 585 -1 O CYS H 582 N GLN H 570 SHEET 3 AA5 3 GLY H 588 TYR H 592 -1 O TYR H 592 N PHE H 581 SHEET 1 AA6 3 ILE H 725 VAL H 726 0 SHEET 2 AA6 3 LYS H 773 PHE H 776 -1 O ILE H 774 N ILE H 725 SHEET 3 AA6 3 TYR H 767 ILE H 769 -1 N ARG H 768 O PHE H 775 SHEET 1 AA7 6 ALA C 29 PHE C 31 0 SHEET 2 AA7 6 VAL C 17 PHE C 21 -1 N ALA C 19 O ALA C 29 SHEET 3 AA7 6 LEU C 8 ASP C 11 -1 N ASP C 11 O LYS C 18 SHEET 4 AA7 6 THR C 103 GLU C 107 1 O LEU C 104 N CYS C 10 SHEET 5 AA7 6 ALA C 131 ILE C 136 1 O ALA C 135 N LEU C 105 SHEET 6 AA7 6 ILE C 357 THR C 358 -1 O ILE C 357 N MET C 132 SHEET 1 AA8 3 TYR C 53 VAL C 54 0 SHEET 2 AA8 3 VAL C 35 PRO C 38 -1 N GLY C 36 O TYR C 53 SHEET 3 AA8 3 LEU C 65 LYS C 68 -1 O LYS C 68 N VAL C 35 SHEET 1 AA9 2 ILE C 71 GLU C 72 0 SHEET 2 AA9 2 ILE C 75 ILE C 76 -1 O ILE C 75 N GLU C 72 SHEET 1 AB1 5 MET C 176 LEU C 178 0 SHEET 2 AB1 5 THR C 160 ASN C 162 -1 N THR C 160 O LEU C 178 SHEET 3 AB1 5 VAL C 152 ASP C 154 -1 N ASP C 154 O HIS C 161 SHEET 4 AB1 5 ASN C 297 SER C 300 1 O VAL C 298 N LEU C 153 SHEET 5 AB1 5 ILE C 329 ILE C 330 1 O ILE C 330 N MET C 299 SHEET 1 AB2 2 LYS C 238 GLU C 241 0 SHEET 2 AB2 2 VAL C 247 ILE C 250 -1 O ILE C 248 N TYR C 240 LINK OD1 ASP C 154 MG MG C 402 1555 1555 2.43 LINK OG SER C 300 MG MG C 402 1555 1555 2.57 LINK OG SER C 338 MG MG C 402 1555 1555 2.60 SITE 1 AC1 11 GLY C 15 LEU C 16 LYS C 18 ASP C 157 SITE 2 AC1 11 GLY C 158 GLU C 214 LYS C 215 GLY C 302 SITE 3 AC1 11 MET C 305 TYR C 306 LYS C 336 SITE 1 AC2 5 ASP C 154 SER C 300 GLY C 301 SER C 338 SITE 2 AC2 5 VAL C 339 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000