HEADER TRANSPORT PROTEIN 14-NOV-17 6BMF TITLE VPS4P-VTA1P COMPLEX WITH PEPTIDE BINDING TO THE CENTRAL PORE OF VPS4P COMPND MOL_ID: 1; COMPND 2 MOLECULE: VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 4; COMPND 3 CHAIN: A, B, C, D, E; COMPND 4 FRAGMENT: UNP RESIDUES 101-437; COMPND 5 SYNONYM: VPS4, DOA4-INDEPENDENT DEGRADATION PROTEIN 6, PROTEIN END13, COMPND 6 VACUOLAR PROTEIN-TARGETING PROTEIN 10; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: VPS2P; COMPND 10 CHAIN: G; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: VPS4, CSC1, DID6, END13, GRD13, VPL4, VPT10, YPR173C, SOURCE 6 P9705.10; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 12 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 13 ORGANISM_TAXID: 4932 KEYWDS VPS4, ESCRT, VTA1, AAA ATPASE, TRANSPORT PROTEIN EXPDTA ELECTRON MICROSCOPY AUTHOR H.HAN,N.MONROE,P.SHEN,W.I.SUNDQUIST,C.P.HILL REVDAT 1 06-DEC-17 6BMF 0 JRNL AUTH H.HAN,N.MONROE,W.I.SUNDQUIST,P.S.SHEN,C.P.HILL JRNL TITL THE AAA ATPASE VPS4 BINDS ESCRT-III SUBSTRATES THROUGH A JRNL TITL 2 REPEATING ARRAY OF DIPEPTIDE-BINDING POCKETS. JRNL REF ELIFE V. 6 2017 JRNL REFN ESSN 2050-084X JRNL PMID 29165244 JRNL DOI 10.7554/ELIFE.31324 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 SOFTWARE PACKAGES : RELION, RELION, RELION REMARK 3 RECONSTRUCTION SCHEMA : NULL REMARK 3 REMARK 3 EM MAP-MODEL FITTING AND REFINEMENT REMARK 3 PDB ENTRY : NULL REMARK 3 REFINEMENT SPACE : NULL REMARK 3 REFINEMENT PROTOCOL : NULL REMARK 3 REFINEMENT TARGET : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE : NULL REMARK 3 REMARK 3 FITTING PROCEDURE : NULL REMARK 3 REMARK 3 EM IMAGE RECONSTRUCTION STATISTICS REMARK 3 NOMINAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 ACTUAL PIXEL SIZE (ANGSTROMS) : NULL REMARK 3 EFFECTIVE RESOLUTION (ANGSTROMS) : 3.200 REMARK 3 NUMBER OF PARTICLES : 82225 REMARK 3 CTF CORRECTION METHOD : PHASE FLIPPING AND AMPLITUDE REMARK 3 CORRECTION REMARK 3 REMARK 3 EM RECONSTRUCTION MAGNIFICATION CALIBRATION: NULL REMARK 3 REMARK 3 OTHER DETAILS: NULL REMARK 4 REMARK 4 6BMF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-NOV-17. REMARK 100 THE DEPOSITION ID IS D_1000231104. REMARK 245 REMARK 245 EXPERIMENTAL DETAILS REMARK 245 RECONSTRUCTION METHOD : SINGLE PARTICLE REMARK 245 SPECIMEN TYPE : NULL REMARK 245 REMARK 245 ELECTRON MICROSCOPE SAMPLE REMARK 245 SAMPLE TYPE : PARTICLE REMARK 245 PARTICLE TYPE : POINT REMARK 245 NAME OF SAMPLE : VPS4P-VPS2P COMPLEX REMARK 245 SAMPLE CONCENTRATION (MG ML-1) : NULL REMARK 245 SAMPLE SUPPORT DETAILS : NULL REMARK 245 SAMPLE VITRIFICATION DETAILS : NULL REMARK 245 SAMPLE BUFFER : NULL REMARK 245 PH : 7.40 REMARK 245 SAMPLE DETAILS : NULL REMARK 245 REMARK 245 DATA ACQUISITION REMARK 245 DATE OF EXPERIMENT : NULL REMARK 245 NUMBER OF MICROGRAPHS-IMAGES : NULL REMARK 245 TEMPERATURE (KELVIN) : NULL REMARK 245 MICROSCOPE MODEL : FEI TITAN KRIOS REMARK 245 DETECTOR TYPE : GATAN K2 SUMMIT (4K X 4K) REMARK 245 MINIMUM DEFOCUS (NM) : NULL REMARK 245 MAXIMUM DEFOCUS (NM) : NULL REMARK 245 MINIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 MAXIMUM TILT ANGLE (DEGREES) : NULL REMARK 245 NOMINAL CS : NULL REMARK 245 IMAGING MODE : BRIGHT FIELD REMARK 245 ELECTRON DOSE (ELECTRONS NM**-2) : 1.55 REMARK 245 ILLUMINATION MODE : FLOOD BEAM REMARK 245 NOMINAL MAGNIFICATION : NULL REMARK 245 CALIBRATED MAGNIFICATION : NULL REMARK 245 SOURCE : FIELD EMISSION GUN REMARK 245 ACCELERATION VOLTAGE (KV) : 300 REMARK 245 IMAGING DETAILS : NULL REMARK 247 REMARK 247 ELECTRON MICROSCOPY REMARK 247 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM ELECTRON REMARK 247 MICROSCOPY DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE REMARK 247 THAT CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES REMARK 247 ON THESE RECORDS ARE MEANINGLESS EXCEPT FOR THE CALCULATION REMARK 247 OF THE STRUCTURE FACTORS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, G REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 101 REMARK 465 GLU A 102 REMARK 465 GLU A 103 REMARK 465 GLY A 104 REMARK 465 GLU A 105 REMARK 465 ASP A 106 REMARK 465 ASN A 107 REMARK 465 GLY A 108 REMARK 465 GLY A 109 REMARK 465 GLU A 110 REMARK 465 ASP A 111 REMARK 465 ASN A 112 REMARK 465 LYS A 113 REMARK 465 LYS A 114 REMARK 465 LEU A 115 REMARK 465 THR A 358 REMARK 465 HIS A 359 REMARK 465 PHE A 360 REMARK 465 LYS A 361 REMARK 465 ASP A 362 REMARK 465 VAL A 363 REMARK 465 SER A 364 REMARK 465 THR A 365 REMARK 465 GLU A 366 REMARK 465 ASP A 367 REMARK 465 ASP A 368 REMARK 465 GLU A 369 REMARK 465 THR A 370 REMARK 465 ARG A 371 REMARK 465 LYS A 372 REMARK 465 LEU A 373 REMARK 465 THR A 374 REMARK 465 PRO A 375 REMARK 465 CYS A 376 REMARK 465 SER A 377 REMARK 465 PRO A 378 REMARK 465 GLY A 379 REMARK 465 ASP A 380 REMARK 465 ASP A 381 REMARK 465 GLY A 382 REMARK 465 ALA A 383 REMARK 465 ILE A 384 REMARK 465 GLU A 385 REMARK 465 MET A 386 REMARK 465 SER A 387 REMARK 465 TRP A 388 REMARK 465 THR A 389 REMARK 465 ASP A 390 REMARK 465 ILE A 391 REMARK 465 GLU A 392 REMARK 465 ALA A 393 REMARK 465 ASP A 394 REMARK 465 GLU A 395 REMARK 465 LEU A 396 REMARK 465 LYS A 397 REMARK 465 GLU A 398 REMARK 465 GLN A 434 REMARK 465 GLU A 435 REMARK 465 GLY A 436 REMARK 465 ASN A 437 REMARK 465 GLN B 101 REMARK 465 GLU B 102 REMARK 465 GLU B 103 REMARK 465 GLY B 104 REMARK 465 GLU B 105 REMARK 465 ASP B 106 REMARK 465 ASN B 107 REMARK 465 GLY B 108 REMARK 465 GLY B 109 REMARK 465 GLU B 110 REMARK 465 ASP B 111 REMARK 465 THR B 358 REMARK 465 HIS B 359 REMARK 465 PHE B 360 REMARK 465 LYS B 361 REMARK 465 ASP B 362 REMARK 465 VAL B 363 REMARK 465 SER B 364 REMARK 465 THR B 365 REMARK 465 GLU B 366 REMARK 465 ASP B 367 REMARK 465 ASP B 368 REMARK 465 GLU B 369 REMARK 465 THR B 370 REMARK 465 ARG B 371 REMARK 465 LYS B 372 REMARK 465 LEU B 373 REMARK 465 THR B 374 REMARK 465 PRO B 375 REMARK 465 CYS B 376 REMARK 465 SER B 377 REMARK 465 PRO B 378 REMARK 465 GLY B 379 REMARK 465 ASP B 380 REMARK 465 ASP B 381 REMARK 465 GLY B 382 REMARK 465 ALA B 383 REMARK 465 ILE B 384 REMARK 465 GLU B 385 REMARK 465 MET B 386 REMARK 465 SER B 387 REMARK 465 TRP B 388 REMARK 465 THR B 389 REMARK 465 ASP B 390 REMARK 465 ILE B 391 REMARK 465 GLU B 392 REMARK 465 ALA B 393 REMARK 465 ASP B 394 REMARK 465 GLU B 395 REMARK 465 LEU B 396 REMARK 465 LYS B 397 REMARK 465 GLU B 398 REMARK 465 GLN C 101 REMARK 465 GLU C 102 REMARK 465 GLU C 103 REMARK 465 GLY C 104 REMARK 465 GLU C 105 REMARK 465 ASP C 106 REMARK 465 ASN C 107 REMARK 465 GLY C 108 REMARK 465 GLY C 109 REMARK 465 GLU C 110 REMARK 465 ASP C 111 REMARK 465 THR C 358 REMARK 465 HIS C 359 REMARK 465 PHE C 360 REMARK 465 LYS C 361 REMARK 465 ASP C 362 REMARK 465 VAL C 363 REMARK 465 SER C 364 REMARK 465 THR C 365 REMARK 465 GLU C 366 REMARK 465 ASP C 367 REMARK 465 ASP C 368 REMARK 465 GLU C 369 REMARK 465 THR C 370 REMARK 465 ARG C 371 REMARK 465 LYS C 372 REMARK 465 LEU C 373 REMARK 465 THR C 374 REMARK 465 PRO C 375 REMARK 465 CYS C 376 REMARK 465 SER C 377 REMARK 465 PRO C 378 REMARK 465 GLY C 379 REMARK 465 ASP C 380 REMARK 465 ASP C 381 REMARK 465 GLY C 382 REMARK 465 ALA C 383 REMARK 465 ILE C 384 REMARK 465 GLU C 385 REMARK 465 MET C 386 REMARK 465 SER C 387 REMARK 465 TRP C 388 REMARK 465 THR C 389 REMARK 465 ASP C 390 REMARK 465 ILE C 391 REMARK 465 GLU C 392 REMARK 465 ALA C 393 REMARK 465 ASP C 394 REMARK 465 GLU C 395 REMARK 465 LEU C 396 REMARK 465 LYS C 397 REMARK 465 GLU C 398 REMARK 465 GLN D 101 REMARK 465 GLU D 102 REMARK 465 GLU D 103 REMARK 465 GLY D 104 REMARK 465 GLU D 105 REMARK 465 ASP D 106 REMARK 465 ASN D 107 REMARK 465 GLY D 108 REMARK 465 GLY D 109 REMARK 465 GLU D 110 REMARK 465 ASP D 111 REMARK 465 THR D 358 REMARK 465 HIS D 359 REMARK 465 PHE D 360 REMARK 465 LYS D 361 REMARK 465 ASP D 362 REMARK 465 VAL D 363 REMARK 465 SER D 364 REMARK 465 THR D 365 REMARK 465 GLU D 366 REMARK 465 ASP D 367 REMARK 465 ASP D 368 REMARK 465 GLU D 369 REMARK 465 THR D 370 REMARK 465 ARG D 371 REMARK 465 LYS D 372 REMARK 465 LEU D 373 REMARK 465 THR D 374 REMARK 465 PRO D 375 REMARK 465 CYS D 376 REMARK 465 SER D 377 REMARK 465 PRO D 378 REMARK 465 GLY D 379 REMARK 465 ASP D 380 REMARK 465 ASP D 381 REMARK 465 GLY D 382 REMARK 465 ALA D 383 REMARK 465 ILE D 384 REMARK 465 GLU D 385 REMARK 465 MET D 386 REMARK 465 SER D 387 REMARK 465 TRP D 388 REMARK 465 THR D 389 REMARK 465 ASP D 390 REMARK 465 ILE D 391 REMARK 465 GLU D 392 REMARK 465 ALA D 393 REMARK 465 ASP D 394 REMARK 465 GLU D 395 REMARK 465 LEU D 396 REMARK 465 LYS D 397 REMARK 465 GLU D 398 REMARK 465 GLN E 101 REMARK 465 GLU E 102 REMARK 465 GLU E 103 REMARK 465 GLY E 104 REMARK 465 GLU E 105 REMARK 465 ASP E 106 REMARK 465 ASN E 107 REMARK 465 GLY E 108 REMARK 465 GLY E 109 REMARK 465 GLU E 110 REMARK 465 ASP E 111 REMARK 465 ASN E 112 REMARK 465 LYS E 113 REMARK 465 LYS E 114 REMARK 465 LEU E 115 REMARK 465 ARG E 116 REMARK 465 GLY E 117 REMARK 465 ALA E 118 REMARK 465 LEU E 119 REMARK 465 SER E 120 REMARK 465 SER E 121 REMARK 465 ALA E 122 REMARK 465 ILE E 123 REMARK 465 LEU E 124 REMARK 465 SER E 125 REMARK 465 THR E 358 REMARK 465 HIS E 359 REMARK 465 PHE E 360 REMARK 465 LYS E 361 REMARK 465 ASP E 362 REMARK 465 VAL E 363 REMARK 465 SER E 364 REMARK 465 THR E 365 REMARK 465 GLU E 366 REMARK 465 ASP E 367 REMARK 465 ASP E 368 REMARK 465 GLU E 369 REMARK 465 THR E 370 REMARK 465 ARG E 371 REMARK 465 LYS E 372 REMARK 465 LEU E 373 REMARK 465 THR E 374 REMARK 465 PRO E 375 REMARK 465 CYS E 376 REMARK 465 SER E 377 REMARK 465 PRO E 378 REMARK 465 GLY E 379 REMARK 465 ASP E 380 REMARK 465 ASP E 381 REMARK 465 GLY E 382 REMARK 465 ALA E 383 REMARK 465 ILE E 384 REMARK 465 GLU E 385 REMARK 465 MET E 386 REMARK 465 SER E 387 REMARK 465 TRP E 388 REMARK 465 THR E 389 REMARK 465 ASP E 390 REMARK 465 ILE E 391 REMARK 465 GLU E 392 REMARK 465 ALA E 393 REMARK 465 ASP E 394 REMARK 465 GLU E 395 REMARK 465 LEU E 396 REMARK 465 LYS E 397 REMARK 465 GLU E 398 REMARK 465 GLN E 434 REMARK 465 GLU E 435 REMARK 465 GLY E 436 REMARK 465 ASN E 437 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ALA A 357 N REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O2B ADP B 501 F1 BEF B 502 2.13 REMARK 500 O3B ADP C 501 F2 BEF C 502 2.13 REMARK 500 O3B ADP B 501 F2 BEF B 502 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 250 NE - CZ - NH1 ANGL. DEV. = -3.4 DEGREES REMARK 500 LEU C 138 CB - CG - CD2 ANGL. DEV. = -10.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 127 78.68 53.19 REMARK 500 VAL A 149 -51.13 -120.66 REMARK 500 SER A 196 56.85 -99.77 REMARK 500 SER A 210 30.58 -90.09 REMARK 500 THR A 240 -7.44 68.61 REMARK 500 ARG A 241 60.79 39.52 REMARK 500 ASN A 261 34.43 -92.48 REMARK 500 ASP A 266 66.55 -100.19 REMARK 500 ILE A 278 77.02 -117.67 REMARK 500 GLN A 281 36.76 -98.32 REMARK 500 THR A 331 42.89 -102.52 REMARK 500 LYS B 127 78.68 53.25 REMARK 500 LEU B 138 69.86 60.02 REMARK 500 VAL B 149 -51.13 -120.62 REMARK 500 MET B 207 74.48 60.05 REMARK 500 GLU B 233 70.13 56.38 REMARK 500 THR B 240 -7.51 68.74 REMARK 500 ARG B 241 60.83 39.54 REMARK 500 VAL B 263 -63.18 -108.51 REMARK 500 ASP B 266 73.28 61.53 REMARK 500 ILE B 278 76.99 -117.61 REMARK 500 GLN B 281 36.78 -98.32 REMARK 500 THR B 331 42.88 -102.54 REMARK 500 PRO B 415 163.36 -49.19 REMARK 500 LYS C 127 78.71 53.28 REMARK 500 VAL C 149 -51.14 -120.65 REMARK 500 MET C 207 76.32 57.38 REMARK 500 GLU C 211 -14.67 -140.37 REMARK 500 GLU C 233 77.51 56.32 REMARK 500 THR C 240 -7.41 68.61 REMARK 500 ARG C 241 60.85 39.49 REMARK 500 VAL C 263 -63.15 -108.52 REMARK 500 ASP C 266 73.27 61.51 REMARK 500 ILE C 278 77.01 -117.61 REMARK 500 GLN C 281 36.84 -98.29 REMARK 500 THR C 331 42.94 -102.54 REMARK 500 SER C 356 60.77 -100.62 REMARK 500 LYS D 127 78.71 53.24 REMARK 500 VAL D 149 -51.08 -120.64 REMARK 500 SER D 196 71.49 -100.93 REMARK 500 TRP D 206 47.59 -106.87 REMARK 500 MET D 207 74.56 60.03 REMARK 500 THR D 240 -7.49 68.65 REMARK 500 ARG D 241 60.79 39.57 REMARK 500 VAL D 263 -63.09 -108.53 REMARK 500 ASP D 266 73.20 61.53 REMARK 500 ILE D 278 76.99 -117.62 REMARK 500 GLN D 281 36.77 -98.35 REMARK 500 THR D 331 42.85 -102.50 REMARK 500 PRO D 415 -173.94 -66.73 REMARK 500 REMARK 500 THIS ENTRY HAS 65 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 269 VAL A 270 -145.99 REMARK 500 LYS B 205 TRP B 206 -142.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 SER C 125 11.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 503 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 180 OG REMARK 620 2 ADP A 501 O2B 85.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 503 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 180 OG REMARK 620 2 ADP B 501 O2B 78.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 503 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER C 180 OG REMARK 620 2 ADP C 501 O2B 77.2 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER D 180 OG REMARK 620 2 ADP D 501 O2B 91.6 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 BEF A 502 BE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ADP A 501 O3B REMARK 620 2 BEF A 502 F1 111.1 REMARK 620 3 BEF A 502 F2 100.2 113.7 REMARK 620 4 BEF A 502 F3 102.3 114.6 113.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 BEF B 502 BE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ADP B 501 O1B REMARK 620 2 BEF B 502 F1 106.1 REMARK 620 3 BEF B 502 F2 98.8 113.1 REMARK 620 4 BEF B 502 F3 104.8 114.2 117.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 BEF C 502 BE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ADP C 501 O1B REMARK 620 2 BEF C 502 F1 112.3 REMARK 620 3 BEF C 502 F2 96.9 114.3 REMARK 620 4 BEF C 502 F3 105.7 111.1 115.4 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BEF A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BEF B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP C 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BEF C 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP D 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG D 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ADP E 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EMD-8887 RELATED DB: EMDB DBREF 6BMF A 101 437 UNP P52917 VPS4_YEAST 101 437 DBREF 6BMF B 101 437 UNP P52917 VPS4_YEAST 101 437 DBREF 6BMF C 101 437 UNP P52917 VPS4_YEAST 101 437 DBREF 6BMF D 101 437 UNP P52917 VPS4_YEAST 101 437 DBREF 6BMF E 101 437 UNP P52917 VPS4_YEAST 101 437 DBREF 6BMF G 0 173 PDB 6BMF 6BMF 0 173 SEQRES 1 A 337 GLN GLU GLU GLY GLU ASP ASN GLY GLY GLU ASP ASN LYS SEQRES 2 A 337 LYS LEU ARG GLY ALA LEU SER SER ALA ILE LEU SER GLU SEQRES 3 A 337 LYS PRO ASN VAL LYS TRP GLU ASP VAL ALA GLY LEU GLU SEQRES 4 A 337 GLY ALA LYS GLU ALA LEU LYS GLU ALA VAL ILE LEU PRO SEQRES 5 A 337 VAL LYS PHE PRO HIS LEU PHE LYS GLY ASN ARG LYS PRO SEQRES 6 A 337 THR SER GLY ILE LEU LEU TYR GLY PRO PRO GLY THR GLY SEQRES 7 A 337 LYS SER TYR LEU ALA LYS ALA VAL ALA THR GLU ALA ASN SEQRES 8 A 337 SER THR PHE PHE SER VAL SER SER SER ASP LEU VAL SER SEQRES 9 A 337 LYS TRP MET GLY GLU SER GLU LYS LEU VAL LYS GLN LEU SEQRES 10 A 337 PHE ALA MET ALA ARG GLU ASN LYS PRO SER ILE ILE PHE SEQRES 11 A 337 ILE ASP GLU VAL ASP ALA LEU THR GLY THR ARG GLY GLU SEQRES 12 A 337 GLY GLU SER GLU ALA SER ARG ARG ILE LYS THR GLU LEU SEQRES 13 A 337 LEU VAL GLN MET ASN GLY VAL GLY ASN ASP SER GLN GLY SEQRES 14 A 337 VAL LEU VAL LEU GLY ALA THR ASN ILE PRO TRP GLN LEU SEQRES 15 A 337 ASP SER ALA ILE ARG ARG ARG PHE GLU ARG ARG ILE TYR SEQRES 16 A 337 ILE PRO LEU PRO ASP LEU ALA ALA ARG THR THR MET PHE SEQRES 17 A 337 GLU ILE ASN VAL GLY ASP THR PRO CYS VAL LEU THR LYS SEQRES 18 A 337 GLU ASP TYR ARG THR LEU GLY ALA MET THR GLU GLY TYR SEQRES 19 A 337 SER GLY SER ASP ILE ALA VAL VAL VAL LYS ASP ALA LEU SEQRES 20 A 337 MET GLN PRO ILE ARG LYS ILE GLN SER ALA THR HIS PHE SEQRES 21 A 337 LYS ASP VAL SER THR GLU ASP ASP GLU THR ARG LYS LEU SEQRES 22 A 337 THR PRO CYS SER PRO GLY ASP ASP GLY ALA ILE GLU MET SEQRES 23 A 337 SER TRP THR ASP ILE GLU ALA ASP GLU LEU LYS GLU PRO SEQRES 24 A 337 ASP LEU THR ILE LYS ASP PHE LEU LYS ALA ILE LYS SER SEQRES 25 A 337 THR ARG PRO THR VAL ASN GLU ASP ASP LEU LEU LYS GLN SEQRES 26 A 337 GLU GLN PHE THR ARG ASP PHE GLY GLN GLU GLY ASN SEQRES 1 B 337 GLN GLU GLU GLY GLU ASP ASN GLY GLY GLU ASP ASN LYS SEQRES 2 B 337 LYS LEU ARG GLY ALA LEU SER SER ALA ILE LEU SER GLU SEQRES 3 B 337 LYS PRO ASN VAL LYS TRP GLU ASP VAL ALA GLY LEU GLU SEQRES 4 B 337 GLY ALA LYS GLU ALA LEU LYS GLU ALA VAL ILE LEU PRO SEQRES 5 B 337 VAL LYS PHE PRO HIS LEU PHE LYS GLY ASN ARG LYS PRO SEQRES 6 B 337 THR SER GLY ILE LEU LEU TYR GLY PRO PRO GLY THR GLY SEQRES 7 B 337 LYS SER TYR LEU ALA LYS ALA VAL ALA THR GLU ALA ASN SEQRES 8 B 337 SER THR PHE PHE SER VAL SER SER SER ASP LEU VAL SER SEQRES 9 B 337 LYS TRP MET GLY GLU SER GLU LYS LEU VAL LYS GLN LEU SEQRES 10 B 337 PHE ALA MET ALA ARG GLU ASN LYS PRO SER ILE ILE PHE SEQRES 11 B 337 ILE ASP GLU VAL ASP ALA LEU THR GLY THR ARG GLY GLU SEQRES 12 B 337 GLY GLU SER GLU ALA SER ARG ARG ILE LYS THR GLU LEU SEQRES 13 B 337 LEU VAL GLN MET ASN GLY VAL GLY ASN ASP SER GLN GLY SEQRES 14 B 337 VAL LEU VAL LEU GLY ALA THR ASN ILE PRO TRP GLN LEU SEQRES 15 B 337 ASP SER ALA ILE ARG ARG ARG PHE GLU ARG ARG ILE TYR SEQRES 16 B 337 ILE PRO LEU PRO ASP LEU ALA ALA ARG THR THR MET PHE SEQRES 17 B 337 GLU ILE ASN VAL GLY ASP THR PRO CYS VAL LEU THR LYS SEQRES 18 B 337 GLU ASP TYR ARG THR LEU GLY ALA MET THR GLU GLY TYR SEQRES 19 B 337 SER GLY SER ASP ILE ALA VAL VAL VAL LYS ASP ALA LEU SEQRES 20 B 337 MET GLN PRO ILE ARG LYS ILE GLN SER ALA THR HIS PHE SEQRES 21 B 337 LYS ASP VAL SER THR GLU ASP ASP GLU THR ARG LYS LEU SEQRES 22 B 337 THR PRO CYS SER PRO GLY ASP ASP GLY ALA ILE GLU MET SEQRES 23 B 337 SER TRP THR ASP ILE GLU ALA ASP GLU LEU LYS GLU PRO SEQRES 24 B 337 ASP LEU THR ILE LYS ASP PHE LEU LYS ALA ILE LYS SER SEQRES 25 B 337 THR ARG PRO THR VAL ASN GLU ASP ASP LEU LEU LYS GLN SEQRES 26 B 337 GLU GLN PHE THR ARG ASP PHE GLY GLN GLU GLY ASN SEQRES 1 C 337 GLN GLU GLU GLY GLU ASP ASN GLY GLY GLU ASP ASN LYS SEQRES 2 C 337 LYS LEU ARG GLY ALA LEU SER SER ALA ILE LEU SER GLU SEQRES 3 C 337 LYS PRO ASN VAL LYS TRP GLU ASP VAL ALA GLY LEU GLU SEQRES 4 C 337 GLY ALA LYS GLU ALA LEU LYS GLU ALA VAL ILE LEU PRO SEQRES 5 C 337 VAL LYS PHE PRO HIS LEU PHE LYS GLY ASN ARG LYS PRO SEQRES 6 C 337 THR SER GLY ILE LEU LEU TYR GLY PRO PRO GLY THR GLY SEQRES 7 C 337 LYS SER TYR LEU ALA LYS ALA VAL ALA THR GLU ALA ASN SEQRES 8 C 337 SER THR PHE PHE SER VAL SER SER SER ASP LEU VAL SER SEQRES 9 C 337 LYS TRP MET GLY GLU SER GLU LYS LEU VAL LYS GLN LEU SEQRES 10 C 337 PHE ALA MET ALA ARG GLU ASN LYS PRO SER ILE ILE PHE SEQRES 11 C 337 ILE ASP GLU VAL ASP ALA LEU THR GLY THR ARG GLY GLU SEQRES 12 C 337 GLY GLU SER GLU ALA SER ARG ARG ILE LYS THR GLU LEU SEQRES 13 C 337 LEU VAL GLN MET ASN GLY VAL GLY ASN ASP SER GLN GLY SEQRES 14 C 337 VAL LEU VAL LEU GLY ALA THR ASN ILE PRO TRP GLN LEU SEQRES 15 C 337 ASP SER ALA ILE ARG ARG ARG PHE GLU ARG ARG ILE TYR SEQRES 16 C 337 ILE PRO LEU PRO ASP LEU ALA ALA ARG THR THR MET PHE SEQRES 17 C 337 GLU ILE ASN VAL GLY ASP THR PRO CYS VAL LEU THR LYS SEQRES 18 C 337 GLU ASP TYR ARG THR LEU GLY ALA MET THR GLU GLY TYR SEQRES 19 C 337 SER GLY SER ASP ILE ALA VAL VAL VAL LYS ASP ALA LEU SEQRES 20 C 337 MET GLN PRO ILE ARG LYS ILE GLN SER ALA THR HIS PHE SEQRES 21 C 337 LYS ASP VAL SER THR GLU ASP ASP GLU THR ARG LYS LEU SEQRES 22 C 337 THR PRO CYS SER PRO GLY ASP ASP GLY ALA ILE GLU MET SEQRES 23 C 337 SER TRP THR ASP ILE GLU ALA ASP GLU LEU LYS GLU PRO SEQRES 24 C 337 ASP LEU THR ILE LYS ASP PHE LEU LYS ALA ILE LYS SER SEQRES 25 C 337 THR ARG PRO THR VAL ASN GLU ASP ASP LEU LEU LYS GLN SEQRES 26 C 337 GLU GLN PHE THR ARG ASP PHE GLY GLN GLU GLY ASN SEQRES 1 D 337 GLN GLU GLU GLY GLU ASP ASN GLY GLY GLU ASP ASN LYS SEQRES 2 D 337 LYS LEU ARG GLY ALA LEU SER SER ALA ILE LEU SER GLU SEQRES 3 D 337 LYS PRO ASN VAL LYS TRP GLU ASP VAL ALA GLY LEU GLU SEQRES 4 D 337 GLY ALA LYS GLU ALA LEU LYS GLU ALA VAL ILE LEU PRO SEQRES 5 D 337 VAL LYS PHE PRO HIS LEU PHE LYS GLY ASN ARG LYS PRO SEQRES 6 D 337 THR SER GLY ILE LEU LEU TYR GLY PRO PRO GLY THR GLY SEQRES 7 D 337 LYS SER TYR LEU ALA LYS ALA VAL ALA THR GLU ALA ASN SEQRES 8 D 337 SER THR PHE PHE SER VAL SER SER SER ASP LEU VAL SER SEQRES 9 D 337 LYS TRP MET GLY GLU SER GLU LYS LEU VAL LYS GLN LEU SEQRES 10 D 337 PHE ALA MET ALA ARG GLU ASN LYS PRO SER ILE ILE PHE SEQRES 11 D 337 ILE ASP GLU VAL ASP ALA LEU THR GLY THR ARG GLY GLU SEQRES 12 D 337 GLY GLU SER GLU ALA SER ARG ARG ILE LYS THR GLU LEU SEQRES 13 D 337 LEU VAL GLN MET ASN GLY VAL GLY ASN ASP SER GLN GLY SEQRES 14 D 337 VAL LEU VAL LEU GLY ALA THR ASN ILE PRO TRP GLN LEU SEQRES 15 D 337 ASP SER ALA ILE ARG ARG ARG PHE GLU ARG ARG ILE TYR SEQRES 16 D 337 ILE PRO LEU PRO ASP LEU ALA ALA ARG THR THR MET PHE SEQRES 17 D 337 GLU ILE ASN VAL GLY ASP THR PRO CYS VAL LEU THR LYS SEQRES 18 D 337 GLU ASP TYR ARG THR LEU GLY ALA MET THR GLU GLY TYR SEQRES 19 D 337 SER GLY SER ASP ILE ALA VAL VAL VAL LYS ASP ALA LEU SEQRES 20 D 337 MET GLN PRO ILE ARG LYS ILE GLN SER ALA THR HIS PHE SEQRES 21 D 337 LYS ASP VAL SER THR GLU ASP ASP GLU THR ARG LYS LEU SEQRES 22 D 337 THR PRO CYS SER PRO GLY ASP ASP GLY ALA ILE GLU MET SEQRES 23 D 337 SER TRP THR ASP ILE GLU ALA ASP GLU LEU LYS GLU PRO SEQRES 24 D 337 ASP LEU THR ILE LYS ASP PHE LEU LYS ALA ILE LYS SER SEQRES 25 D 337 THR ARG PRO THR VAL ASN GLU ASP ASP LEU LEU LYS GLN SEQRES 26 D 337 GLU GLN PHE THR ARG ASP PHE GLY GLN GLU GLY ASN SEQRES 1 E 337 GLN GLU GLU GLY GLU ASP ASN GLY GLY GLU ASP ASN LYS SEQRES 2 E 337 LYS LEU ARG GLY ALA LEU SER SER ALA ILE LEU SER GLU SEQRES 3 E 337 LYS PRO ASN VAL LYS TRP GLU ASP VAL ALA GLY LEU GLU SEQRES 4 E 337 GLY ALA LYS GLU ALA LEU LYS GLU ALA VAL ILE LEU PRO SEQRES 5 E 337 VAL LYS PHE PRO HIS LEU PHE LYS GLY ASN ARG LYS PRO SEQRES 6 E 337 THR SER GLY ILE LEU LEU TYR GLY PRO PRO GLY THR GLY SEQRES 7 E 337 LYS SER TYR LEU ALA LYS ALA VAL ALA THR GLU ALA ASN SEQRES 8 E 337 SER THR PHE PHE SER VAL SER SER SER ASP LEU VAL SER SEQRES 9 E 337 LYS TRP MET GLY GLU SER GLU LYS LEU VAL LYS GLN LEU SEQRES 10 E 337 PHE ALA MET ALA ARG GLU ASN LYS PRO SER ILE ILE PHE SEQRES 11 E 337 ILE ASP GLU VAL ASP ALA LEU THR GLY THR ARG GLY GLU SEQRES 12 E 337 GLY GLU SER GLU ALA SER ARG ARG ILE LYS THR GLU LEU SEQRES 13 E 337 LEU VAL GLN MET ASN GLY VAL GLY ASN ASP SER GLN GLY SEQRES 14 E 337 VAL LEU VAL LEU GLY ALA THR ASN ILE PRO TRP GLN LEU SEQRES 15 E 337 ASP SER ALA ILE ARG ARG ARG PHE GLU ARG ARG ILE TYR SEQRES 16 E 337 ILE PRO LEU PRO ASP LEU ALA ALA ARG THR THR MET PHE SEQRES 17 E 337 GLU ILE ASN VAL GLY ASP THR PRO CYS VAL LEU THR LYS SEQRES 18 E 337 GLU ASP TYR ARG THR LEU GLY ALA MET THR GLU GLY TYR SEQRES 19 E 337 SER GLY SER ASP ILE ALA VAL VAL VAL LYS ASP ALA LEU SEQRES 20 E 337 MET GLN PRO ILE ARG LYS ILE GLN SER ALA THR HIS PHE SEQRES 21 E 337 LYS ASP VAL SER THR GLU ASP ASP GLU THR ARG LYS LEU SEQRES 22 E 337 THR PRO CYS SER PRO GLY ASP ASP GLY ALA ILE GLU MET SEQRES 23 E 337 SER TRP THR ASP ILE GLU ALA ASP GLU LEU LYS GLU PRO SEQRES 24 E 337 ASP LEU THR ILE LYS ASP PHE LEU LYS ALA ILE LYS SER SEQRES 25 E 337 THR ARG PRO THR VAL ASN GLU ASP ASP LEU LEU LYS GLN SEQRES 26 E 337 GLU GLN PHE THR ARG ASP PHE GLY GLN GLU GLY ASN SEQRES 1 G 10 ACE ASP GLU ILE VAL ASN LYS VAL LEU NH2 HET ACE G 0 3 HET NH2 G 173 1 HET ADP A 501 27 HET BEF A 502 4 HET MG A 503 1 HET ADP B 501 27 HET BEF B 502 4 HET MG B 503 1 HET ADP C 501 27 HET BEF C 502 4 HET MG C 503 1 HET ADP D 501 27 HET MG D 502 1 HET ADP E 501 27 HETNAM ACE ACETYL GROUP HETNAM NH2 AMINO GROUP HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM BEF BERYLLIUM TRIFLUORIDE ION HETNAM MG MAGNESIUM ION FORMUL 6 ACE C2 H4 O FORMUL 6 NH2 H2 N FORMUL 7 ADP 5(C10 H15 N5 O10 P2) FORMUL 8 BEF 3(BE F3 1-) FORMUL 9 MG 4(MG 2+) HELIX 1 AA1 LEU A 138 PHE A 155 1 18 HELIX 2 AA2 GLY A 178 ALA A 190 1 13 HELIX 3 AA3 GLY A 208 ASN A 224 1 17 HELIX 4 AA4 GLU A 233 LEU A 237 5 5 HELIX 5 AA5 GLU A 245 MET A 260 1 16 HELIX 6 AA6 ILE A 278 LEU A 282 5 5 HELIX 7 AA7 ASP A 283 PHE A 290 1 8 HELIX 8 AA8 ASP A 300 VAL A 312 1 13 HELIX 9 AA9 THR A 320 THR A 331 1 12 HELIX 10 AB1 SER A 335 SER A 356 1 22 HELIX 11 AB2 ILE A 403 THR A 413 1 11 HELIX 12 AB3 ASP A 420 GLY A 433 1 14 HELIX 13 AB4 LYS B 113 LEU B 119 1 7 HELIX 14 AB5 SER B 120 ALA B 122 5 3 HELIX 15 AB6 LEU B 138 PHE B 155 1 18 HELIX 16 AB7 GLY B 178 ALA B 190 1 13 HELIX 17 AB8 GLY B 208 ASN B 224 1 17 HELIX 18 AB9 VAL B 234 LEU B 237 5 4 HELIX 19 AC1 GLU B 245 ASN B 261 1 17 HELIX 20 AC2 ILE B 278 LEU B 282 5 5 HELIX 21 AC3 ASP B 283 PHE B 290 1 8 HELIX 22 AC4 ASP B 300 VAL B 312 1 13 HELIX 23 AC5 THR B 320 THR B 331 1 12 HELIX 24 AC6 SER B 335 SER B 356 1 22 HELIX 25 AC7 ILE B 403 THR B 413 1 11 HELIX 26 AC8 ASP B 420 GLY B 433 1 14 HELIX 27 AC9 LYS C 113 LEU C 119 1 7 HELIX 28 AD1 SER C 120 ALA C 122 5 3 HELIX 29 AD2 LYS C 131 VAL C 135 5 5 HELIX 30 AD3 LEU C 138 PHE C 155 1 18 HELIX 31 AD4 GLY C 178 ALA C 190 1 13 HELIX 32 AD5 GLU C 211 ASN C 224 1 14 HELIX 33 AD6 GLU C 233 LEU C 237 5 5 HELIX 34 AD7 GLU C 245 ASN C 261 1 17 HELIX 35 AD8 ILE C 278 LEU C 282 5 5 HELIX 36 AD9 ASP C 283 PHE C 290 1 8 HELIX 37 AE1 ASP C 300 VAL C 312 1 13 HELIX 38 AE2 THR C 320 THR C 331 1 12 HELIX 39 AE3 SER C 335 MET C 348 1 14 HELIX 40 AE4 MET C 348 SER C 356 1 9 HELIX 41 AE5 THR C 402 THR C 413 1 12 HELIX 42 AE6 ASP C 420 GLY C 433 1 14 HELIX 43 AE7 LYS D 113 LEU D 119 1 7 HELIX 44 AE8 SER D 120 ALA D 122 5 3 HELIX 45 AE9 LEU D 138 PHE D 155 1 18 HELIX 46 AF1 GLY D 178 ALA D 190 1 13 HELIX 47 AF2 SER D 210 ARG D 222 1 13 HELIX 48 AF3 VAL D 234 LEU D 237 5 4 HELIX 49 AF4 GLU D 245 ASN D 261 1 17 HELIX 50 AF5 ILE D 278 LEU D 282 5 5 HELIX 51 AF6 ASP D 283 PHE D 290 1 8 HELIX 52 AF7 ASP D 300 VAL D 312 1 13 HELIX 53 AF8 THR D 320 THR D 331 1 12 HELIX 54 AF9 SER D 335 MET D 348 1 14 HELIX 55 AG1 MET D 348 SER D 356 1 9 HELIX 56 AG2 ILE D 403 THR D 413 1 11 HELIX 57 AG3 ASP D 420 GLY D 433 1 14 HELIX 58 AG4 LEU E 138 LYS E 154 1 17 HELIX 59 AG5 GLY E 178 GLU E 189 1 12 HELIX 60 AG6 GLU E 211 GLU E 223 1 13 HELIX 61 AG7 GLU E 233 LEU E 237 5 5 HELIX 62 AG8 GLU E 245 ASN E 261 1 17 HELIX 63 AG9 ILE E 278 LEU E 282 5 5 HELIX 64 AH1 ASP E 283 PHE E 290 1 8 HELIX 65 AH2 ASP E 300 VAL E 312 1 13 HELIX 66 AH3 THR E 320 THR E 331 1 12 HELIX 67 AH4 SER E 335 SER E 356 1 22 HELIX 68 AH5 THR E 402 THR E 413 1 12 HELIX 69 AH6 ASP E 420 GLY E 433 1 14 SHEET 1 AA1 3 ALA A 275 THR A 276 0 SHEET 2 AA1 3 LEU A 170 TYR A 172 1 N LEU A 171 O THR A 276 SHEET 3 AA1 3 ARG A 293 TYR A 295 1 O ILE A 294 N TYR A 172 SHEET 1 AA2 3 THR A 193 PHE A 195 0 SHEET 2 AA2 3 SER A 227 PHE A 230 1 O PHE A 230 N PHE A 195 SHEET 3 AA2 3 LEU A 271 LEU A 273 1 O LEU A 273 N ILE A 229 SHEET 1 AA3 5 THR B 193 VAL B 197 0 SHEET 2 AA3 5 SER B 227 ASP B 232 1 O PHE B 230 N PHE B 195 SHEET 3 AA3 5 VAL B 270 THR B 276 1 O LEU B 271 N ILE B 229 SHEET 4 AA3 5 LEU B 170 TYR B 172 1 N LEU B 171 O GLY B 274 SHEET 5 AA3 5 ARG B 293 TYR B 295 1 O ILE B 294 N LEU B 170 SHEET 1 AA4 5 THR C 193 PHE C 194 0 SHEET 2 AA4 5 SER C 227 ILE C 231 1 O ILE C 228 N THR C 193 SHEET 3 AA4 5 VAL C 270 THR C 276 1 O LEU C 273 N ILE C 229 SHEET 4 AA4 5 LEU C 170 TYR C 172 1 N LEU C 171 O GLY C 274 SHEET 5 AA4 5 ARG C 293 TYR C 295 1 O ILE C 294 N LEU C 170 SHEET 1 AA5 5 THR D 193 PHE D 195 0 SHEET 2 AA5 5 SER D 227 ASP D 232 1 O ILE D 228 N PHE D 195 SHEET 3 AA5 5 VAL D 270 THR D 276 1 O LEU D 271 N ILE D 229 SHEET 4 AA5 5 LEU D 170 TYR D 172 1 N LEU D 171 O GLY D 274 SHEET 5 AA5 5 ARG D 293 TYR D 295 1 O ILE D 294 N LEU D 170 SHEET 1 AA6 2 LEU E 170 TYR E 172 0 SHEET 2 AA6 2 ARG E 293 TYR E 295 1 O ILE E 294 N LEU E 170 SHEET 1 AA7 3 THR E 193 PHE E 195 0 SHEET 2 AA7 3 SER E 227 ILE E 229 1 O ILE E 228 N PHE E 195 SHEET 3 AA7 3 VAL E 270 VAL E 272 1 O LEU E 271 N ILE E 229 LINK OG SER A 180 MG MG A 503 1555 1555 2.04 LINK OG SER B 180 MG MG B 503 1555 1555 2.03 LINK OG SER C 180 MG MG C 503 1555 1555 2.03 LINK OG SER D 180 MG MG D 502 1555 1555 1.87 LINK C ACE G 0 N ASP G 165 1555 1555 1.33 LINK C LEU G 172 N NH2 G 173 1555 1555 1.33 LINK O2B ADP A 501 MG MG A 503 1555 1555 2.04 LINK O3B ADP A 501 BE BEF A 502 1555 1555 1.55 LINK O1B ADP B 501 BE BEF B 502 1555 1555 1.54 LINK O2B ADP B 501 MG MG B 503 1555 1555 2.04 LINK O1B ADP C 501 BE BEF C 502 1555 1555 1.55 LINK O2B ADP C 501 MG MG C 503 1555 1555 2.04 LINK O2B ADP D 501 MG MG D 502 1555 1555 2.14 CISPEP 1 LYS A 225 PRO A 226 0 0.43 CISPEP 2 LYS B 225 PRO B 226 0 -2.10 CISPEP 3 LYS C 225 PRO C 226 0 -6.20 CISPEP 4 LYS D 225 PRO D 226 0 -6.34 CISPEP 5 LYS E 225 PRO E 226 0 -14.64 SITE 1 AC1 15 ASP A 134 VAL A 135 ALA A 136 GLY A 176 SITE 2 AC1 15 THR A 177 GLY A 178 LYS A 179 SER A 180 SITE 3 AC1 15 TYR A 181 GLY A 336 SER A 337 BEF A 502 SITE 4 AC1 15 MG A 503 ASN B 261 ARG B 288 SITE 1 AC2 8 PRO A 174 PRO A 175 GLY A 176 LYS A 179 SITE 2 AC2 8 ASN A 277 ADP A 501 MG A 503 ARG B 288 SITE 1 AC3 3 SER A 180 ADP A 501 BEF A 502 SITE 1 AC4 15 ASP B 134 ALA B 136 GLY B 176 THR B 177 SITE 2 AC4 15 GLY B 178 LYS B 179 SER B 180 TYR B 181 SITE 3 AC4 15 MET B 307 GLY B 336 SER B 337 BEF B 502 SITE 4 AC4 15 MG B 503 ASN C 261 ARG C 288 SITE 1 AC5 9 PRO B 174 PRO B 175 GLY B 176 LYS B 179 SITE 2 AC5 9 SER B 180 ADP B 501 MG B 503 ARG C 288 SITE 3 AC5 9 ARG C 289 SITE 1 AC6 3 SER B 180 ADP B 501 BEF B 502 SITE 1 AC7 13 ASP C 134 VAL C 135 ALA C 136 GLY C 176 SITE 2 AC7 13 THR C 177 GLY C 178 LYS C 179 SER C 180 SITE 3 AC7 13 TYR C 181 BEF C 502 MG C 503 ASN D 261 SITE 4 AC7 13 ARG D 288 SITE 1 AC8 8 PRO C 174 GLY C 176 LYS C 179 SER C 180 SITE 2 AC8 8 ADP C 501 MG C 503 ARG D 288 ARG D 289 SITE 1 AC9 3 SER C 180 ADP C 501 BEF C 502 SITE 1 AD1 10 ASP D 134 ALA D 136 GLY D 176 THR D 177 SITE 2 AD1 10 GLY D 178 LYS D 179 SER D 180 TYR D 181 SITE 3 AD1 10 GLY D 336 MG D 502 SITE 1 AD2 2 SER D 180 ADP D 501 SITE 1 AD3 8 PRO E 175 GLY E 176 THR E 177 GLY E 178 SITE 2 AD3 8 LYS E 179 SER E 180 TYR E 181 GLY E 336 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000