HEADER VIRAL PROTEIN 18-NOV-17 6BO3 TITLE STRUCTURE DETERMINATION OF A223, A TURRET PROTEIN IN SULFOLOBUS TITLE 2 TURRETED ICOSAHEDRAL VIRUS, USING AN ITERATIVE HYBRID APPROACH COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS TURRETED ICOSAHEDRAL VIRUS 1; SOURCE 3 ORGANISM_TAXID: 269145; SOURCE 4 GENE: A223; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: CODONPLUS (DE3) RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PDEST14 KEYWDS A223, STIV, C381, TWIN, TWINNING, 3J31, 4IL7, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.K.SENDAMARAI,D.VEESLER,C.Y.FU,C.MARCEAU,E.T.LARSON,J.E.JOHNSON, AUTHOR 2 C.M.LAWRENCE REVDAT 4 04-OCT-23 6BO3 1 REMARK REVDAT 3 27-NOV-19 6BO3 1 REMARK REVDAT 2 20-FEB-19 6BO3 1 REMARK REVDAT 1 21-NOV-18 6BO3 0 JRNL AUTH A.K.SENDAMARAI,C.M.LAWRENCE JRNL TITL STRUCTURAL CHARACTERIZATION OF A223, A STRUCTURAL PROTEIN JRNL TITL 2 FROM SULFOLOBUS TURRETED ICOSAHEDRAL VIRUS (STIV) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.83 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.83 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 44222 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.195 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.300 REMARK 3 FREE R VALUE TEST SET COUNT : 2466 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.83 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.88 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3148 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.67 REMARK 3 BIN R VALUE (WORKING SET) : 0.2170 REMARK 3 BIN FREE R VALUE SET COUNT : 173 REMARK 3 BIN FREE R VALUE : 0.2630 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2966 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 51 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 17.19000 REMARK 3 B22 (A**2) : 17.19000 REMARK 3 B33 (A**2) : -34.37000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.027 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.020 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.047 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.216 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.955 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3046 ; 0.008 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2905 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4164 ; 1.426 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6688 ; 0.721 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 390 ; 6.899 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 121 ;44.511 ;26.446 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 495 ;13.219 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 2 ;34.118 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 513 ; 0.077 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3470 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 652 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 5951 ; 3.706 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 26 ; 8.878 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 5921 ; 3.710 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 3 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 20 A 131 2 REMARK 3 1 B 20 B 131 2 REMARK 3 2 A 140 A 177 6 REMARK 3 2 B 140 B 177 6 REMARK 3 3 A 183 A 223 6 REMARK 3 3 B 183 B 223 6 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 914 ; 0.15 ; 0.50 REMARK 3 LOOSE POSITIONAL 1 A (A): 1130 ; 3.87 ; 5.00 REMARK 3 TIGHT THERMAL 1 A (A**2): 582 ; 1.87 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 914 ; 2.91 ; 2.00 REMARK 3 LOOSE THERMAL 1 A (A**2): 1130 ; 2.56 ; 10.00 REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 2 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.501 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : -H,-K,L REMARK 3 TWIN FRACTION : 0.499 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 17 A 131 REMARK 3 ORIGIN FOR THE GROUP (A): 8.3395 33.4520 29.6663 REMARK 3 T TENSOR REMARK 3 T11: 0.1096 T22: 0.1120 REMARK 3 T33: 0.1903 T12: 0.0059 REMARK 3 T13: -0.0163 T23: -0.0137 REMARK 3 L TENSOR REMARK 3 L11: 2.1248 L22: 1.5101 REMARK 3 L33: 3.0595 L12: 0.0696 REMARK 3 L13: -0.8891 L23: -0.8459 REMARK 3 S TENSOR REMARK 3 S11: -0.0070 S12: 0.0085 S13: -0.0297 REMARK 3 S21: -0.0485 S22: -0.0290 S23: -0.0880 REMARK 3 S31: 0.1022 S32: 0.1438 S33: 0.0360 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 132 A 140 REMARK 3 ORIGIN FOR THE GROUP (A): 4.0461 54.3634 31.7781 REMARK 3 T TENSOR REMARK 3 T11: 0.2347 T22: 0.1896 REMARK 3 T33: 0.2830 T12: 0.0342 REMARK 3 T13: -0.0005 T23: -0.0035 REMARK 3 L TENSOR REMARK 3 L11: 0.4816 L22: 18.4461 REMARK 3 L33: 5.9842 L12: 2.9231 REMARK 3 L13: 1.6663 L23: 10.5041 REMARK 3 S TENSOR REMARK 3 S11: -0.0567 S12: -0.0250 S13: 0.0313 REMARK 3 S21: -0.1504 S22: 0.1098 S23: -0.0844 REMARK 3 S31: -0.1100 S32: 0.0673 S33: -0.0531 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 141 A 223 REMARK 3 ORIGIN FOR THE GROUP (A): -3.8757 72.0250 39.5732 REMARK 3 T TENSOR REMARK 3 T11: 0.1046 T22: 0.1129 REMARK 3 T33: 0.1993 T12: -0.0084 REMARK 3 T13: -0.0120 T23: 0.0023 REMARK 3 L TENSOR REMARK 3 L11: 2.1334 L22: 2.1488 REMARK 3 L33: 3.4219 L12: -0.1823 REMARK 3 L13: -0.1715 L23: -0.7693 REMARK 3 S TENSOR REMARK 3 S11: -0.0216 S12: 0.1430 S13: 0.0053 REMARK 3 S21: -0.0674 S22: 0.0379 S23: 0.0330 REMARK 3 S31: 0.1217 S32: -0.0671 S33: -0.0163 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 19 B 131 REMARK 3 ORIGIN FOR THE GROUP (A): -9.7507 31.8982 16.5832 REMARK 3 T TENSOR REMARK 3 T11: 0.1161 T22: 0.1262 REMARK 3 T33: 0.1792 T12: -0.0081 REMARK 3 T13: -0.0161 T23: 0.0136 REMARK 3 L TENSOR REMARK 3 L11: 2.4571 L22: 1.7955 REMARK 3 L33: 2.4682 L12: -0.2175 REMARK 3 L13: -0.8823 L23: 0.6236 REMARK 3 S TENSOR REMARK 3 S11: 0.0021 S12: 0.0947 S13: -0.0370 REMARK 3 S21: 0.0041 S22: -0.0239 S23: 0.0552 REMARK 3 S31: 0.0969 S32: -0.1084 S33: 0.0218 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 132 B 140 REMARK 3 ORIGIN FOR THE GROUP (A): -7.1713 52.9380 12.7829 REMARK 3 T TENSOR REMARK 3 T11: 0.2933 T22: 0.1570 REMARK 3 T33: 0.2717 T12: -0.0142 REMARK 3 T13: -0.0281 T23: -0.0077 REMARK 3 L TENSOR REMARK 3 L11: 0.3042 L22: 17.1653 REMARK 3 L33: 7.5637 L12: -1.6597 REMARK 3 L13: 1.0994 L23: -11.3943 REMARK 3 S TENSOR REMARK 3 S11: -0.2241 S12: -0.0372 S13: 0.0511 REMARK 3 S21: 0.2636 S22: 0.4684 S23: 0.3582 REMARK 3 S31: -0.1716 S32: -0.3205 S33: -0.2443 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 141 B 223 REMARK 3 ORIGIN FOR THE GROUP (A): 2.9192 68.8735 6.3549 REMARK 3 T TENSOR REMARK 3 T11: 0.1262 T22: 0.1372 REMARK 3 T33: 0.2251 T12: 0.0079 REMARK 3 T13: -0.0070 T23: 0.0035 REMARK 3 L TENSOR REMARK 3 L11: 1.5443 L22: 1.8938 REMARK 3 L33: 3.4466 L12: 0.2103 REMARK 3 L13: -0.0214 L23: 1.0777 REMARK 3 S TENSOR REMARK 3 S11: 0.0235 S12: -0.0644 S13: -0.0243 REMARK 3 S21: -0.0254 S22: 0.0307 S23: -0.0508 REMARK 3 S31: 0.0790 S32: 0.1047 S33: -0.0542 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 6BO3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB. REMARK 100 THE DEPOSITION ID IS D_1000231169. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-APR-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.82653 REMARK 200 MONOCHROMATOR : SI(111) AND SI(220) DOUBLE REMARK 200 CRYSTAL REMARK 200 OPTICS : MIRROR: RH COATED FLAT BENT M0, REMARK 200 TOROIDAL FOCUSING POST- REMARK 200 MONOCHROMATOR M1 REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 47436 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.820 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 5.400 REMARK 200 R MERGE (I) : 0.04300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 16.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.82 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.89 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.53000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 3J31 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.62 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALS OF A223-L208M WERE GROWN BY REMARK 280 HANGING DROP VAPOUR DIFFUSION USING 2 MICRO-L OF THE PROTEIN REMARK 280 SOLUTION AND 2 MICRO-L IN 0.1 M TRI-SODIUM CITRATE DIHYDRATE PH REMARK 280 5.6 AND 35% T-BUTANOL., VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 90.93567 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 181.87133 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 181.87133 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 90.93567 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 GLU A 3 REMARK 465 VAL A 4 REMARK 465 PHE A 5 REMARK 465 LYS A 6 REMARK 465 GLU A 7 REMARK 465 VAL A 8 REMARK 465 LYS A 9 REMARK 465 GLU A 10 REMARK 465 LYS A 11 REMARK 465 PHE A 12 REMARK 465 GLU A 13 REMARK 465 ARG A 14 REMARK 465 TYR A 15 REMARK 465 LYS A 16 REMARK 465 HIS A 66 REMARK 465 GLU A 67 REMARK 465 GLY A 68 REMARK 465 LEU A 69 REMARK 465 SER A 70 REMARK 465 PRO A 71 REMARK 465 ILE A 72 REMARK 465 PRO A 73 REMARK 465 GLY A 74 REMARK 465 GLU A 75 REMARK 465 GLY A 76 REMARK 465 HIS A 224 REMARK 465 HIS A 225 REMARK 465 HIS A 226 REMARK 465 HIS A 227 REMARK 465 HIS A 228 REMARK 465 HIS A 229 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 GLU B 3 REMARK 465 VAL B 4 REMARK 465 PHE B 5 REMARK 465 LYS B 6 REMARK 465 GLU B 7 REMARK 465 VAL B 8 REMARK 465 LYS B 9 REMARK 465 GLU B 10 REMARK 465 LYS B 11 REMARK 465 PHE B 12 REMARK 465 GLU B 13 REMARK 465 ARG B 14 REMARK 465 TYR B 15 REMARK 465 LYS B 16 REMARK 465 PHE B 17 REMARK 465 ASP B 18 REMARK 465 SER B 65 REMARK 465 HIS B 66 REMARK 465 GLU B 67 REMARK 465 GLY B 68 REMARK 465 LEU B 69 REMARK 465 SER B 70 REMARK 465 PRO B 71 REMARK 465 ILE B 72 REMARK 465 PRO B 73 REMARK 465 GLY B 74 REMARK 465 GLU B 75 REMARK 465 HIS B 224 REMARK 465 HIS B 225 REMARK 465 HIS B 226 REMARK 465 HIS B 227 REMARK 465 HIS B 228 REMARK 465 HIS B 229 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 42 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 223 CG1 CG2 CD1 REMARK 470 GLU B 41 CG CD OE1 OE2 REMARK 470 ARG B 42 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 64 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 N PHE A 17 O HOH A 301 1.93 REMARK 500 CD GLN A 176 O HOH A 302 2.04 REMARK 500 NE2 GLN A 176 O HOH A 302 2.15 REMARK 500 OE1 GLN A 176 O HOH A 302 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 29 -167.67 -161.83 REMARK 500 ARG A 42 41.03 -106.51 REMARK 500 GLU B 124 48.63 -83.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3J31 RELATED DB: PDB REMARK 900 STIV1 WHOLE PARTICLE EM DBREF 6BO3 A 1 223 UNP Q6Q0L4 Q6Q0L4_9VIRU 1 223 DBREF 6BO3 B 1 223 UNP Q6Q0L4 Q6Q0L4_9VIRU 1 223 SEQADV 6BO3 MET A 208 UNP Q6Q0L4 LEU 208 ENGINEERED MUTATION SEQADV 6BO3 HIS A 224 UNP Q6Q0L4 EXPRESSION TAG SEQADV 6BO3 HIS A 225 UNP Q6Q0L4 EXPRESSION TAG SEQADV 6BO3 HIS A 226 UNP Q6Q0L4 EXPRESSION TAG SEQADV 6BO3 HIS A 227 UNP Q6Q0L4 EXPRESSION TAG SEQADV 6BO3 HIS A 228 UNP Q6Q0L4 EXPRESSION TAG SEQADV 6BO3 HIS A 229 UNP Q6Q0L4 EXPRESSION TAG SEQADV 6BO3 MET B 208 UNP Q6Q0L4 LEU 208 ENGINEERED MUTATION SEQADV 6BO3 HIS B 224 UNP Q6Q0L4 EXPRESSION TAG SEQADV 6BO3 HIS B 225 UNP Q6Q0L4 EXPRESSION TAG SEQADV 6BO3 HIS B 226 UNP Q6Q0L4 EXPRESSION TAG SEQADV 6BO3 HIS B 227 UNP Q6Q0L4 EXPRESSION TAG SEQADV 6BO3 HIS B 228 UNP Q6Q0L4 EXPRESSION TAG SEQADV 6BO3 HIS B 229 UNP Q6Q0L4 EXPRESSION TAG SEQRES 1 A 229 MET GLY GLU VAL PHE LYS GLU VAL LYS GLU LYS PHE GLU SEQRES 2 A 229 ARG TYR LYS PHE ASP VAL VAL TYR VAL ASP ARG GLU TYR SEQRES 3 A 229 PRO VAL SER SER ASN ASN LEU ASN VAL PHE PHE GLU ILE SEQRES 4 A 229 GLY GLU ARG ASN SER PHE SER GLY LEU LEU ILE ASN GLU SEQRES 5 A 229 GLY GLN ALA VAL ILE ASP VAL LEU LEU LEU LYS LYS SER SEQRES 6 A 229 HIS GLU GLY LEU SER PRO ILE PRO GLY GLU GLY THR GLY SEQRES 7 A 229 ILE GLN LEU SER ALA GLY GLN ILE LEU LYS PHE TYR ASN SEQRES 8 A 229 VAL PRO ILE ALA GLU ILE ILE VAL GLU TYR ASP PRO SER SEQRES 9 A 229 ASN VAL SER GLY VAL SER SER ASN VAL LYS LEU LYS GLY SEQRES 10 A 229 THR ILE HIS PRO LEU PHE GLU VAL PRO SER GLN ILE SER SEQRES 11 A 229 ILE GLU ASN PHE GLN PRO THR GLU ASN TYR LEU ILE TYR SEQRES 12 A 229 SER GLY PHE GLY THR SER LEU PRO GLN THR TYR THR ILE SEQRES 13 A 229 PRO ALA ASN GLY TYR LEU ILE ILE SER ILE THR ASN THR SEQRES 14 A 229 SER THR GLY ASN ILE GLY GLN ILE THR LEU THR ILE GLY SEQRES 15 A 229 SER THR THR MET THR PHE ASN LEU GLN THR GLY GLU ASN SEQRES 16 A 229 LYS ILE PRO VAL ILE ALA GLY THR GLN ILE THR ASN MET SEQRES 17 A 229 THR LEU THR SER SER SER ALA ILE LEU ILE TYR GLU GLU SEQRES 18 A 229 VAL ILE HIS HIS HIS HIS HIS HIS SEQRES 1 B 229 MET GLY GLU VAL PHE LYS GLU VAL LYS GLU LYS PHE GLU SEQRES 2 B 229 ARG TYR LYS PHE ASP VAL VAL TYR VAL ASP ARG GLU TYR SEQRES 3 B 229 PRO VAL SER SER ASN ASN LEU ASN VAL PHE PHE GLU ILE SEQRES 4 B 229 GLY GLU ARG ASN SER PHE SER GLY LEU LEU ILE ASN GLU SEQRES 5 B 229 GLY GLN ALA VAL ILE ASP VAL LEU LEU LEU LYS LYS SER SEQRES 6 B 229 HIS GLU GLY LEU SER PRO ILE PRO GLY GLU GLY THR GLY SEQRES 7 B 229 ILE GLN LEU SER ALA GLY GLN ILE LEU LYS PHE TYR ASN SEQRES 8 B 229 VAL PRO ILE ALA GLU ILE ILE VAL GLU TYR ASP PRO SER SEQRES 9 B 229 ASN VAL SER GLY VAL SER SER ASN VAL LYS LEU LYS GLY SEQRES 10 B 229 THR ILE HIS PRO LEU PHE GLU VAL PRO SER GLN ILE SER SEQRES 11 B 229 ILE GLU ASN PHE GLN PRO THR GLU ASN TYR LEU ILE TYR SEQRES 12 B 229 SER GLY PHE GLY THR SER LEU PRO GLN THR TYR THR ILE SEQRES 13 B 229 PRO ALA ASN GLY TYR LEU ILE ILE SER ILE THR ASN THR SEQRES 14 B 229 SER THR GLY ASN ILE GLY GLN ILE THR LEU THR ILE GLY SEQRES 15 B 229 SER THR THR MET THR PHE ASN LEU GLN THR GLY GLU ASN SEQRES 16 B 229 LYS ILE PRO VAL ILE ALA GLY THR GLN ILE THR ASN MET SEQRES 17 B 229 THR LEU THR SER SER SER ALA ILE LEU ILE TYR GLU GLU SEQRES 18 B 229 VAL ILE HIS HIS HIS HIS HIS HIS FORMUL 3 HOH *51(H2 O) SHEET 1 AA1 9 VAL A 20 VAL A 28 0 SHEET 2 AA1 9 SER A 111 HIS A 120 -1 O VAL A 113 N TYR A 26 SHEET 3 AA1 9 SER A 44 GLY A 53 -1 N ILE A 50 O LYS A 114 SHEET 4 AA1 9 GLN A 85 PRO A 93 -1 O LEU A 87 N LEU A 49 SHEET 5 AA1 9 SER A 127 ASN A 133 -1 O GLU A 132 N ILE A 86 SHEET 6 AA1 9 THR B 77 LEU B 81 1 O GLN B 80 N ILE A 129 SHEET 7 AA1 9 ILE B 57 LEU B 62 -1 N ILE B 57 O LEU B 81 SHEET 8 AA1 9 GLU B 96 TYR B 101 -1 O ILE B 98 N LEU B 60 SHEET 9 AA1 9 ASN B 34 GLU B 38 -1 N PHE B 37 O ILE B 97 SHEET 1 AA2 9 ASN A 34 GLU A 38 0 SHEET 2 AA2 9 GLU A 96 TYR A 101 -1 O ILE A 97 N PHE A 37 SHEET 3 AA2 9 ILE A 57 LEU A 62 -1 N ASP A 58 O GLU A 100 SHEET 4 AA2 9 GLY A 78 LEU A 81 -1 O LEU A 81 N ILE A 57 SHEET 5 AA2 9 GLN B 128 ASN B 133 1 O ILE B 129 N GLN A 80 SHEET 6 AA2 9 GLN B 85 PRO B 93 -1 N LYS B 88 O SER B 130 SHEET 7 AA2 9 ASN B 43 GLY B 53 -1 N LEU B 49 O LEU B 87 SHEET 8 AA2 9 SER B 111 PRO B 121 -1 O LYS B 116 N LEU B 48 SHEET 9 AA2 9 VAL B 20 VAL B 28 -1 N TYR B 26 O VAL B 113 SHEET 1 AA3 4 GLU A 138 SER A 149 0 SHEET 2 AA3 4 GLN A 204 VAL A 222 -1 O ILE A 218 N TYR A 143 SHEET 3 AA3 4 ASN A 173 ILE A 181 -1 N GLN A 176 O THR A 209 SHEET 4 AA3 4 THR A 184 GLN A 191 -1 O MET A 186 N LEU A 179 SHEET 1 AA4 4 TYR A 154 THR A 155 0 SHEET 2 AA4 4 GLN A 204 VAL A 222 -1 O ILE A 205 N TYR A 154 SHEET 3 AA4 4 GLY A 160 THR A 167 -1 N ILE A 163 O TYR A 219 SHEET 4 AA4 4 GLY A 193 VAL A 199 -1 O GLY A 193 N ILE A 166 SHEET 1 AA5 4 GLU B 138 SER B 149 0 SHEET 2 AA5 4 GLN B 204 VAL B 222 -1 O ILE B 218 N TYR B 143 SHEET 3 AA5 4 ASN B 173 ILE B 181 -1 N THR B 178 O ASN B 207 SHEET 4 AA5 4 THR B 184 GLN B 191 -1 O MET B 186 N LEU B 179 SHEET 1 AA6 4 TYR B 154 THR B 155 0 SHEET 2 AA6 4 GLN B 204 VAL B 222 -1 O ILE B 205 N TYR B 154 SHEET 3 AA6 4 GLY B 160 THR B 167 -1 N SER B 165 O LEU B 217 SHEET 4 AA6 4 GLY B 193 VAL B 199 -1 O ILE B 197 N LEU B 162 CRYST1 56.995 56.995 272.807 90.00 90.00 120.00 P 31 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017545 0.010130 0.000000 0.00000 SCALE2 0.000000 0.020260 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003666 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 -0.987803 -0.155460 0.008799 3.62941 1 MTRIX2 2 -0.155699 0.985543 -0.066810 2.06500 1 MTRIX3 2 0.001714 -0.067365 -0.997727 47.83965 1