HEADER TRANSFERASE 19-NOV-17 6BOD TITLE TBK1 IN COMPLEX WITH ETHYL ESTER ANALOG OF AMLEXANOX COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE TBK1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: NF-KAPPA-B-ACTIVATING KINASE,T2K,TANK-BINDING KINASE 1; COMPND 5 EC: 2.7.11.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: TBK1, NAK; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PH7PFB KEYWDS TBK1, KINASE, AMLEXANOX, OBESITY, DIABETES, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR T.S.BEYETT,J.J.G.TESMER REVDAT 4 04-OCT-23 6BOD 1 REMARK REVDAT 3 25-DEC-19 6BOD 1 REMARK REVDAT 2 20-FEB-19 6BOD 1 REMARK REVDAT 1 26-SEP-18 6BOD 0 JRNL AUTH T.S.BEYETT,X.GAN,S.M.REILLY,L.CHANG,A.V.GOMEZ,A.R.SALTIEL, JRNL AUTH 2 H.D.SHOWALTER,J.J.G.TESMER JRNL TITL CARBOXYLIC ACID DERIVATIVES OF AMLEXANOX DISPLAY ENHANCED JRNL TITL 2 POTENCY TOWARD TBK1 AND IKKEPSILONAND REVEAL MECHANISMS FOR JRNL TITL 3 SELECTIVE INHIBITION. JRNL REF MOL. PHARMACOL. V. 94 1210 2018 JRNL REFN ESSN 1521-0111 JRNL PMID 30082428 JRNL DOI 10.1124/MOL.118.112185 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.11.1_2575 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.05 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 14927 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.228 REMARK 3 R VALUE (WORKING SET) : 0.223 REMARK 3 FREE R VALUE : 0.271 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.970 REMARK 3 FREE R VALUE TEST SET COUNT : 1497 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.0539 - 8.6630 0.95 1229 132 0.1561 0.1721 REMARK 3 2 8.6630 - 6.8825 1.00 1272 140 0.1776 0.2950 REMARK 3 3 6.8825 - 6.0144 1.00 1301 134 0.2443 0.2944 REMARK 3 4 6.0144 - 5.4654 1.00 1263 148 0.2488 0.2684 REMARK 3 5 5.4654 - 5.0741 1.00 1283 148 0.2267 0.3047 REMARK 3 6 5.0741 - 4.7752 1.00 1282 140 0.1988 0.2338 REMARK 3 7 4.7752 - 4.5362 1.00 1284 136 0.2105 0.2502 REMARK 3 8 4.5362 - 4.3389 1.00 1269 145 0.2227 0.2963 REMARK 3 9 4.3389 - 4.1720 1.00 1277 146 0.2193 0.2528 REMARK 3 10 4.1720 - 4.0281 1.00 1297 150 0.2276 0.2364 REMARK 3 11 4.0281 - 3.9022 1.00 1273 134 0.2341 0.2971 REMARK 3 12 3.9022 - 3.7907 1.00 1277 142 0.2569 0.3068 REMARK 3 13 3.7907 - 3.6909 1.00 1277 143 0.2654 0.3058 REMARK 3 14 3.6909 - 3.6009 1.00 1274 149 0.2964 0.3407 REMARK 3 15 3.6009 - 3.5191 1.00 1273 140 0.2972 0.3626 REMARK 3 16 3.5191 - 3.4442 1.00 1268 140 0.2950 0.3104 REMARK 3 17 3.4442 - 3.3753 1.00 1317 142 0.3224 0.3541 REMARK 3 18 3.3753 - 3.3117 1.00 1265 142 0.3609 0.4055 REMARK 3 19 3.3117 - 3.2525 1.00 1297 144 0.3930 0.4356 REMARK 3 20 3.2525 - 3.1974 0.98 1235 130 0.4354 0.4738 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.450 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 30.980 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 121.7 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 141.9 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.001 5062 REMARK 3 ANGLE : 0.396 6835 REMARK 3 CHIRALITY : 0.038 759 REMARK 3 PLANARITY : 0.003 868 REMARK 3 DIHEDRAL : 8.490 3051 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 0 THROUGH 160 ) REMARK 3 ORIGIN FOR THE GROUP (A): -28.2411 -14.7400 -4.4680 REMARK 3 T TENSOR REMARK 3 T11: 1.0155 T22: 1.2553 REMARK 3 T33: 1.3491 T12: 0.1495 REMARK 3 T13: 0.0188 T23: 0.0025 REMARK 3 L TENSOR REMARK 3 L11: 4.8506 L22: 3.3754 REMARK 3 L33: 1.2525 L12: 2.1133 REMARK 3 L13: -2.2981 L23: -0.1905 REMARK 3 S TENSOR REMARK 3 S11: -0.2918 S12: 0.4097 S13: -0.3711 REMARK 3 S21: -0.5638 S22: 0.1046 S23: -0.7493 REMARK 3 S31: 0.2387 S32: 0.1286 S33: 0.1656 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 161 THROUGH 230 ) REMARK 3 ORIGIN FOR THE GROUP (A): -33.6573 -32.6788 7.7608 REMARK 3 T TENSOR REMARK 3 T11: 1.1708 T22: 1.0238 REMARK 3 T33: 1.5995 T12: -0.0058 REMARK 3 T13: -0.0519 T23: -0.0657 REMARK 3 L TENSOR REMARK 3 L11: 5.9911 L22: 5.0314 REMARK 3 L33: 2.5920 L12: -0.4468 REMARK 3 L13: -1.5912 L23: -3.1676 REMARK 3 S TENSOR REMARK 3 S11: 0.1027 S12: 0.2659 S13: -1.2653 REMARK 3 S21: -0.4314 S22: -0.2007 S23: 0.2041 REMARK 3 S31: 1.1582 S32: 0.4290 S33: -0.1053 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 231 THROUGH 284 ) REMARK 3 ORIGIN FOR THE GROUP (A): -44.0544 -34.3041 13.6519 REMARK 3 T TENSOR REMARK 3 T11: 0.9745 T22: 1.1013 REMARK 3 T33: 1.5075 T12: -0.0833 REMARK 3 T13: 0.0723 T23: 0.0981 REMARK 3 L TENSOR REMARK 3 L11: 2.8343 L22: 3.2421 REMARK 3 L33: 4.4665 L12: 0.0984 REMARK 3 L13: 0.2317 L23: -0.0330 REMARK 3 S TENSOR REMARK 3 S11: 0.1662 S12: 0.0048 S13: -1.2845 REMARK 3 S21: 0.2170 S22: -0.2123 S23: -0.3129 REMARK 3 S31: 0.8957 S32: -0.1309 S33: 0.0225 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 285 THROUGH 407 ) REMARK 3 ORIGIN FOR THE GROUP (A): -60.5277 -19.5858 10.5798 REMARK 3 T TENSOR REMARK 3 T11: 0.7524 T22: 1.1783 REMARK 3 T33: 1.0563 T12: -0.0968 REMARK 3 T13: 0.0008 T23: -0.1610 REMARK 3 L TENSOR REMARK 3 L11: 2.4654 L22: 3.0908 REMARK 3 L33: 2.6447 L12: -0.1648 REMARK 3 L13: -0.4703 L23: 0.2273 REMARK 3 S TENSOR REMARK 3 S11: 0.1628 S12: 0.5496 S13: -0.8609 REMARK 3 S21: -0.1746 S22: -0.2277 S23: 0.2810 REMARK 3 S31: 0.3209 S32: -0.7032 S33: 0.0650 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 408 THROUGH 479 ) REMARK 3 ORIGIN FOR THE GROUP (A): -73.5074 -7.4109 22.0399 REMARK 3 T TENSOR REMARK 3 T11: 0.6692 T22: 1.2583 REMARK 3 T33: 0.6960 T12: -0.0270 REMARK 3 T13: -0.0048 T23: 0.1751 REMARK 3 L TENSOR REMARK 3 L11: 9.5616 L22: 2.6625 REMARK 3 L33: 0.4633 L12: 0.4137 REMARK 3 L13: 1.9652 L23: 0.6100 REMARK 3 S TENSOR REMARK 3 S11: 0.5005 S12: -0.2965 S13: 0.6831 REMARK 3 S21: -0.2364 S22: -0.5221 S23: 0.4274 REMARK 3 S31: 0.1177 S32: -0.1496 S33: -0.0571 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 480 THROUGH 526 ) REMARK 3 ORIGIN FOR THE GROUP (A):-104.1543 -8.2716 28.0957 REMARK 3 T TENSOR REMARK 3 T11: 0.9892 T22: 2.3741 REMARK 3 T33: 1.5774 T12: -0.1376 REMARK 3 T13: 0.1848 T23: -0.2972 REMARK 3 L TENSOR REMARK 3 L11: 7.0791 L22: 0.0538 REMARK 3 L33: 0.4526 L12: 0.6507 REMARK 3 L13: 0.1689 L23: -0.3437 REMARK 3 S TENSOR REMARK 3 S11: 1.5003 S12: -0.3120 S13: 1.2167 REMARK 3 S21: 0.4631 S22: -1.2449 S23: -0.0420 REMARK 3 S31: -0.1088 S32: 0.5288 S33: -0.1618 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 527 THROUGH 604 ) REMARK 3 ORIGIN FOR THE GROUP (A): -38.6716 -7.7974 29.3436 REMARK 3 T TENSOR REMARK 3 T11: 0.8136 T22: 1.0779 REMARK 3 T33: 1.0646 T12: -0.1595 REMARK 3 T13: -0.1051 T23: 0.1445 REMARK 3 L TENSOR REMARK 3 L11: 5.7344 L22: 2.9403 REMARK 3 L33: 1.1233 L12: 0.5454 REMARK 3 L13: 0.8383 L23: -0.1591 REMARK 3 S TENSOR REMARK 3 S11: 0.6643 S12: -0.1935 S13: 0.6826 REMARK 3 S21: 0.1491 S22: -0.4860 S23: -0.7501 REMARK 3 S31: 0.1104 S32: 0.1878 S33: -0.1750 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 605 THROUGH 657 ) REMARK 3 ORIGIN FOR THE GROUP (A): -89.6131 -12.5657 23.3535 REMARK 3 T TENSOR REMARK 3 T11: 0.9322 T22: 1.8095 REMARK 3 T33: 1.3276 T12: -0.1296 REMARK 3 T13: 0.0257 T23: -0.1067 REMARK 3 L TENSOR REMARK 3 L11: 9.1876 L22: 0.2205 REMARK 3 L33: 1.6348 L12: -1.1581 REMARK 3 L13: 5.1082 L23: -0.2712 REMARK 3 S TENSOR REMARK 3 S11: 0.6161 S12: -0.7757 S13: -0.2854 REMARK 3 S21: -0.0323 S22: -0.4635 S23: 0.5473 REMARK 3 S31: 0.3552 S32: -0.5153 S33: -0.0537 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6BOD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-NOV-17. REMARK 100 THE DEPOSITION ID IS D_1000231189. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-APR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0-8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97857 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE 0.5.26 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14973 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 48.048 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 16.40 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.1700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.39 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 16.74 REMARK 200 R MERGE FOR SHELL (I) : 1.71700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.980 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.6.0 REMARK 200 STARTING MODEL: 4IM0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES PH 7.5, 4% PEG 8000, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.85000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 28.42500 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 28.42500 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 56.85000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ASN A 42 REMARK 465 ILE A 43 REMARK 465 SER A 44 REMARK 465 PHE A 45 REMARK 465 LEU A 46 REMARK 465 ARG A 47 REMARK 465 PRO A 48 REMARK 465 VAL A 49 REMARK 465 ASP A 50 REMARK 465 LEU A 164 REMARK 465 GLU A 165 REMARK 465 ASP A 166 REMARK 465 ASP A 167 REMARK 465 GLU A 168 REMARK 465 GLN A 169 REMARK 465 PHE A 170 REMARK 465 VAL A 171 REMARK 465 SER A 172 REMARK 465 LEU A 173 REMARK 465 TYR A 174 REMARK 465 GLY A 175 REMARK 465 ALA A 188 REMARK 465 VAL A 189 REMARK 465 LEU A 190 REMARK 465 ARG A 191 REMARK 465 LYS A 192 REMARK 465 ASP A 193 REMARK 465 HIS A 194 REMARK 465 GLN A 195 REMARK 465 LYS A 196 REMARK 465 LYS A 197 REMARK 465 TYR A 198 REMARK 465 GLY A 199 REMARK 465 TYR A 482 REMARK 465 GLU A 483 REMARK 465 LYS A 484 REMARK 465 LEU A 485 REMARK 465 MET A 486 REMARK 465 LYS A 487 REMARK 465 ILE A 488 REMARK 465 ASN A 489 REMARK 465 LEU A 490 REMARK 465 GLU A 491 REMARK 465 ALA A 492 REMARK 465 ALA A 493 REMARK 465 GLU A 494 REMARK 465 LEU A 495 REMARK 465 GLY A 496 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 4 -154.50 -116.38 REMARK 500 LEU A 10 -166.97 -77.28 REMARK 500 ASN A 63 96.14 -161.19 REMARK 500 PHE A 71 -79.52 -72.78 REMARK 500 THR A 78 -72.83 -58.44 REMARK 500 ARG A 80 40.55 -77.56 REMARK 500 ARG A 162 -155.83 -120.50 REMARK 500 GLU A 225 -153.88 59.25 REMARK 500 ALA A 287 -70.18 -59.62 REMARK 500 ILE A 390 -55.83 -122.14 REMARK 500 LEU A 532 59.58 -105.68 REMARK 500 GLU A 572 86.94 -68.50 REMARK 500 GLU A 604 -60.20 -157.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue E0P A 801 DBREF 6BOD A 1 657 UNP Q9UHD2 TBK1_HUMAN 1 657 SEQADV 6BOD SER A -2 UNP Q9UHD2 EXPRESSION TAG SEQADV 6BOD ASN A -1 UNP Q9UHD2 EXPRESSION TAG SEQADV 6BOD ALA A 0 UNP Q9UHD2 EXPRESSION TAG SEQRES 1 A 660 SER ASN ALA MET GLN SER THR SER ASN HIS LEU TRP LEU SEQRES 2 A 660 LEU SER ASP ILE LEU GLY GLN GLY ALA THR ALA ASN VAL SEQRES 3 A 660 PHE ARG GLY ARG HIS LYS LYS THR GLY ASP LEU PHE ALA SEQRES 4 A 660 ILE LYS VAL PHE ASN ASN ILE SER PHE LEU ARG PRO VAL SEQRES 5 A 660 ASP VAL GLN MET ARG GLU PHE GLU VAL LEU LYS LYS LEU SEQRES 6 A 660 ASN HIS LYS ASN ILE VAL LYS LEU PHE ALA ILE GLU GLU SEQRES 7 A 660 GLU THR THR THR ARG HIS LYS VAL LEU ILE MET GLU PHE SEQRES 8 A 660 CYS PRO CYS GLY SER LEU TYR THR VAL LEU GLU GLU PRO SEQRES 9 A 660 SER ASN ALA TYR GLY LEU PRO GLU SER GLU PHE LEU ILE SEQRES 10 A 660 VAL LEU ARG ASP VAL VAL GLY GLY MET ASN HIS LEU ARG SEQRES 11 A 660 GLU ASN GLY ILE VAL HIS ARG ASP ILE LYS PRO GLY ASN SEQRES 12 A 660 ILE MET ARG VAL ILE GLY GLU ASP GLY GLN SER VAL TYR SEQRES 13 A 660 LYS LEU THR ASP PHE GLY ALA ALA ARG GLU LEU GLU ASP SEQRES 14 A 660 ASP GLU GLN PHE VAL SER LEU TYR GLY THR GLU GLU TYR SEQRES 15 A 660 LEU HIS PRO ASP MET TYR GLU ARG ALA VAL LEU ARG LYS SEQRES 16 A 660 ASP HIS GLN LYS LYS TYR GLY ALA THR VAL ASP LEU TRP SEQRES 17 A 660 SER ILE GLY VAL THR PHE TYR HIS ALA ALA THR GLY SER SEQRES 18 A 660 LEU PRO PHE ARG PRO PHE GLU GLY PRO ARG ARG ASN LYS SEQRES 19 A 660 GLU VAL MET TYR LYS ILE ILE THR GLY LYS PRO SER GLY SEQRES 20 A 660 ALA ILE SER GLY VAL GLN LYS ALA GLU ASN GLY PRO ILE SEQRES 21 A 660 ASP TRP SER GLY ASP MET PRO VAL SER CYS SER LEU SER SEQRES 22 A 660 ARG GLY LEU GLN VAL LEU LEU THR PRO VAL LEU ALA ASN SEQRES 23 A 660 ILE LEU GLU ALA ASP GLN GLU LYS CYS TRP GLY PHE ASP SEQRES 24 A 660 GLN PHE PHE ALA GLU THR SER ASP ILE LEU HIS ARG MET SEQRES 25 A 660 VAL ILE HIS VAL PHE SER LEU GLN GLN MET THR ALA HIS SEQRES 26 A 660 LYS ILE TYR ILE HIS SER TYR ASN THR ALA THR ILE PHE SEQRES 27 A 660 HIS GLU LEU VAL TYR LYS GLN THR LYS ILE ILE SER SER SEQRES 28 A 660 ASN GLN GLU LEU ILE TYR GLU GLY ARG ARG LEU VAL LEU SEQRES 29 A 660 GLU PRO GLY ARG LEU ALA GLN HIS PHE PRO LYS THR THR SEQRES 30 A 660 GLU GLU ASN PRO ILE PHE VAL VAL SER ARG GLU PRO LEU SEQRES 31 A 660 ASN THR ILE GLY LEU ILE TYR GLU LYS ILE SER LEU PRO SEQRES 32 A 660 LYS VAL HIS PRO ARG TYR ASP LEU ASP GLY ASP ALA SER SEQRES 33 A 660 MET ALA LYS ALA ILE THR GLY VAL VAL CYS TYR ALA CYS SEQRES 34 A 660 ARG ILE ALA SER THR LEU LEU LEU TYR GLN GLU LEU MET SEQRES 35 A 660 ARG LYS GLY ILE ARG TRP LEU ILE GLU LEU ILE LYS ASP SEQRES 36 A 660 ASP TYR ASN GLU THR VAL HIS LYS LYS THR GLU VAL VAL SEQRES 37 A 660 ILE THR LEU ASP PHE CYS ILE ARG ASN ILE GLU LYS THR SEQRES 38 A 660 VAL LYS VAL TYR GLU LYS LEU MET LYS ILE ASN LEU GLU SEQRES 39 A 660 ALA ALA GLU LEU GLY GLU ILE SER ASP ILE HIS THR LYS SEQRES 40 A 660 LEU LEU ARG LEU SER SER SER GLN GLY THR ILE GLU THR SEQRES 41 A 660 SER LEU GLN ASP ILE ASP SER ARG LEU SER PRO GLY GLY SEQRES 42 A 660 SER LEU ALA ASP ALA TRP ALA HIS GLN GLU GLY THR HIS SEQRES 43 A 660 PRO LYS ASP ARG ASN VAL GLU LYS LEU GLN VAL LEU LEU SEQRES 44 A 660 ASN CYS MET THR GLU ILE TYR TYR GLN PHE LYS LYS ASP SEQRES 45 A 660 LYS ALA GLU ARG ARG LEU ALA TYR ASN GLU GLU GLN ILE SEQRES 46 A 660 HIS LYS PHE ASP LYS GLN LYS LEU TYR TYR HIS ALA THR SEQRES 47 A 660 LYS ALA MET THR HIS PHE THR ASP GLU CYS VAL LYS LYS SEQRES 48 A 660 TYR GLU ALA PHE LEU ASN LYS SER GLU GLU TRP ILE ARG SEQRES 49 A 660 LYS MET LEU HIS LEU ARG LYS GLN LEU LEU SER LEU THR SEQRES 50 A 660 ASN GLN CYS PHE ASP ILE GLU GLU GLU VAL SER LYS TYR SEQRES 51 A 660 GLN GLU TYR THR ASN GLU LEU GLN GLU THR HET E0P A 801 24 HETNAM E0P ETHYL 2-AMINO-5-OXO-7-(PROPAN-2-YL)-5H- HETNAM 2 E0P [1]BENZOPYRANO[2,3-B]PYRIDINE-3-CARBOXYLATE FORMUL 2 E0P C18 H18 N2 O4 HELIX 1 AA1 GLN A 52 LYS A 61 1 10 HELIX 2 AA2 SER A 93 LEU A 98 1 6 HELIX 3 AA3 GLU A 99 ALA A 104 5 6 HELIX 4 AA4 PRO A 108 GLY A 130 1 23 HELIX 5 AA5 THR A 201 GLY A 217 1 17 HELIX 6 AA6 ASN A 230 GLY A 240 1 11 HELIX 7 AA7 SER A 270 LEU A 285 1 16 HELIX 8 AA8 ASP A 288 CYS A 292 5 5 HELIX 9 AA9 GLY A 294 HIS A 307 1 14 HELIX 10 AB1 THR A 331 LYS A 344 1 14 HELIX 11 AB2 ILE A 346 GLN A 350 5 5 HELIX 12 AB3 LEU A 366 PHE A 370 5 5 HELIX 13 AB4 ASP A 407 LYS A 480 1 74 HELIX 14 AB5 ILE A 498 SER A 527 1 30 HELIX 15 AB6 ALA A 535 GLN A 539 5 5 HELIX 16 AB7 HIS A 543 ASP A 546 5 4 HELIX 17 AB8 ARG A 547 GLU A 572 1 26 HELIX 18 AB9 ALA A 576 ASP A 603 1 28 HELIX 19 AC1 GLU A 604 THR A 651 1 48 SHEET 1 AA1 4 MET A 1 SER A 3 0 SHEET 2 AA1 4 HIS A 7 LEU A 10 -1 O TRP A 9 N GLN A 2 SHEET 3 AA1 4 ALA A 21 HIS A 28 -1 O ARG A 27 N LEU A 8 SHEET 4 AA1 4 ILE A 14 GLN A 17 -1 N GLY A 16 O VAL A 23 SHEET 1 AA2 6 MET A 1 SER A 3 0 SHEET 2 AA2 6 HIS A 7 LEU A 10 -1 O TRP A 9 N GLN A 2 SHEET 3 AA2 6 ALA A 21 HIS A 28 -1 O ARG A 27 N LEU A 8 SHEET 4 AA2 6 PHE A 35 PHE A 40 -1 O VAL A 39 N ASN A 22 SHEET 5 AA2 6 LYS A 82 GLU A 87 -1 O MET A 86 N ALA A 36 SHEET 6 AA2 6 LEU A 70 GLU A 75 -1 N GLU A 74 O VAL A 83 SHEET 1 AA3 2 ILE A 141 ILE A 145 0 SHEET 2 AA3 2 SER A 151 LEU A 155 -1 O LYS A 154 N MET A 142 SHEET 1 AA4 3 PHE A 221 ARG A 222 0 SHEET 2 AA4 3 SER A 247 VAL A 249 1 O GLY A 248 N ARG A 222 SHEET 3 AA4 3 ASP A 258 SER A 260 -1 O ASP A 258 N VAL A 249 SHEET 1 AA5 5 THR A 320 HIS A 327 0 SHEET 2 AA5 5 ARG A 308 SER A 315 -1 N MET A 309 O ILE A 326 SHEET 3 AA5 5 ILE A 379 VAL A 382 1 O ILE A 379 N PHE A 314 SHEET 4 AA5 5 GLU A 351 TYR A 354 -1 N ILE A 353 O PHE A 380 SHEET 5 AA5 5 ARG A 357 LEU A 359 -1 O ARG A 357 N TYR A 354 SITE 1 AC1 9 LEU A 15 ALA A 36 MET A 86 GLU A 87 SITE 2 AC1 9 PHE A 88 CYS A 89 MET A 142 THR A 156 SITE 3 AC1 9 ASP A 157 CRYST1 134.314 134.314 85.275 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007445 0.004299 0.000000 0.00000 SCALE2 0.000000 0.008597 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011727 0.00000