HEADER UNKNOWN FUNCTION 01-DEC-17 6BS4
TITLE CRYSTAL STRUCTURE OF ATPGAMMAS-BOUND BACTERIAL GET3-LIKE A AND B IN
TITLE 2 MYCOBACTERIUM TUBERCULOSIS
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: PUTATIVE ATPASE RV3679;
COMPND 3 CHAIN: A;
COMPND 4 SYNONYM: BACTERIAL GET3-LIKE A;
COMPND 5 ENGINEERED: YES;
COMPND 6 MOL_ID: 2;
COMPND 7 MOLECULE: ANION TRANSPORTER;
COMPND 8 CHAIN: B;
COMPND 9 SYNONYM: BACTERIAL GET3-LIKE B;
COMPND 10 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS H37RV;
SOURCE 3 ORGANISM_TAXID: 83332;
SOURCE 4 STRAIN: ATCC 25618 / H37RV;
SOURCE 5 GENE: RV3679, MTV025.027;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562;
SOURCE 8 MOL_ID: 2;
SOURCE 9 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS H37RV;
SOURCE 10 ORGANISM_TAXID: 83332;
SOURCE 11 STRAIN: ATCC 25618 / H37RV;
SOURCE 12 GENE: LH57_20055;
SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI;
SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562
KEYWDS COMPLEX, UNKNOWN FUNCTION
EXPDTA X-RAY DIFFRACTION
AUTHOR H.LI,K.HU,A.KOVACH
REVDAT 4 04-OCT-23 6BS4 1 LINK
REVDAT 3 11-DEC-19 6BS4 1 REMARK
REVDAT 2 31-JUL-19 6BS4 1 JRNL
REVDAT 1 15-MAY-19 6BS4 0
JRNL AUTH K.HU,A.T.JORDAN,S.ZHANG,A.DHABARIA,A.KOVACH,M.V.RANGEL,
JRNL AUTH 2 B.UEBERHEIDE,H.LI,K.H.DARWIN
JRNL TITL CHARACTERIZATION OF GUIDED ENTRY OF TAIL-ANCHORED PROTEINS 3
JRNL TITL 2 HOMOLOGUES IN MYCOBACTERIUM TUBERCULOSIS.
JRNL REF J.BACTERIOL. V. 201 2019
JRNL REFN ESSN 1098-5530
JRNL PMID 31036728
JRNL DOI 10.1128/JB.00159-19
REMARK 2
REMARK 2 RESOLUTION. 2.50 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : BUSTER 2.11.7
REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER,
REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN,
REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.23
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0
REMARK 3 NUMBER OF REFLECTIONS : 34860
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.193
REMARK 3 R VALUE (WORKING SET) : 0.191
REMARK 3 FREE R VALUE : 0.227
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.980
REMARK 3 FREE R VALUE TEST SET COUNT : 1737
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 50
REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50
REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.52
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.13
REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 698
REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2294
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 675
REMARK 3 BIN R VALUE (WORKING SET) : 0.2269
REMARK 3 BIN FREE R VALUE : 0.3017
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 3.30
REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 5146
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 60
REMARK 3 SOLVENT ATOMS : 207
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 60.02
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.12
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : 0.96490
REMARK 3 B22 (A**2) : 0.96490
REMARK 3 B33 (A**2) : -1.92980
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.300
REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.313
REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.224
REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.309
REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.226
REMARK 3
REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797
REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.944
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921
REMARK 3
REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15
REMARK 3 TERM COUNT WEIGHT FUNCTION.
REMARK 3 BOND LENGTHS : 5301 ; 2.000 ; HARMONIC
REMARK 3 BOND ANGLES : 7221 ; 2.000 ; HARMONIC
REMARK 3 TORSION ANGLES : 1856 ; 2.000 ; SINUSOIDAL
REMARK 3 TRIGONAL CARBON PLANES : NULL ; NULL ; NULL
REMARK 3 GENERAL PLANES : 925 ; 5.000 ; HARMONIC
REMARK 3 ISOTROPIC THERMAL FACTORS : 5301 ; 20.000 ; HARMONIC
REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC
REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL
REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL
REMARK 3 CHIRAL IMPROPER TORSION : 716 ; 5.000 ; SEMIHARMONIC
REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL
REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL
REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL
REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL
REMARK 3 IDEAL-DIST CONTACT TERM : 6154 ; 4.000 ; SEMIHARMONIC
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : 0.010
REMARK 3 BOND ANGLES (DEGREES) : 1.10
REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.95
REMARK 3 OTHER TORSION ANGLES (DEGREES) : 17.74
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 2
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: { A|* }
REMARK 3 ORIGIN FOR THE GROUP (A): -36.4037 41.4042 13.1643
REMARK 3 T TENSOR
REMARK 3 T11: -0.1696 T22: -0.0897
REMARK 3 T33: -0.1610 T12: -0.0229
REMARK 3 T13: -0.0011 T23: 0.0188
REMARK 3 L TENSOR
REMARK 3 L11: 1.2728 L22: 1.9176
REMARK 3 L33: 1.2127 L12: 0.2686
REMARK 3 L13: 0.0201 L23: 0.4603
REMARK 3 S TENSOR
REMARK 3 S11: -0.0329 S12: -0.0474 S13: 0.0366
REMARK 3 S21: 0.1100 S22: -0.0103 S23: 0.0273
REMARK 3 S31: -0.0347 S32: 0.0932 S33: 0.0432
REMARK 3
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: { B|* }
REMARK 3 ORIGIN FOR THE GROUP (A): -61.5234 40.9495 20.2516
REMARK 3 T TENSOR
REMARK 3 T11: -0.1163 T22: -0.0766
REMARK 3 T33: -0.2028 T12: 0.0254
REMARK 3 T13: 0.0221 T23: 0.0026
REMARK 3 L TENSOR
REMARK 3 L11: 1.2433 L22: 1.9155
REMARK 3 L33: 0.8917 L12: -0.2331
REMARK 3 L13: -0.0501 L23: 0.2984
REMARK 3 S TENSOR
REMARK 3 S11: -0.0238 S12: 0.0480 S13: -0.0021
REMARK 3 S21: -0.2063 S22: -0.0028 S23: -0.1002
REMARK 3 S31: 0.0050 S32: -0.0446 S33: 0.0265
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 6BS4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-DEC-17.
REMARK 100 THE DEPOSITION ID IS D_1000231329.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 20-APR-17
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : NULL
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : APS
REMARK 200 BEAMLINE : 31-ID
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.07822
REMARK 200 MONOCHROMATOR : DIAMOND(111)
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM
REMARK 200 DATA SCALING SOFTWARE : SCALA
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34876
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500
REMARK 200 RESOLUTION RANGE LOW (A) : 48.230
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 97.0
REMARK 200 DATA REDUNDANCY : 20.00
REMARK 200 R MERGE (I) : 0.12400
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 18.6000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59
REMARK 200 COMPLETENESS FOR SHELL (%) : NULL
REMARK 200 DATA REDUNDANCY IN SHELL : NULL
REMARK 200 R MERGE FOR SHELL (I) : 0.80200
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHENIX
REMARK 200 STARTING MODEL: PDB ENTRY 6BS3
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 62.38
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.27
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: PEG8000, CALCIUM ACETATE, VAPOR
REMARK 280 DIFFUSION, TEMPERATURE 293K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -Y,X-Y,Z+2/3
REMARK 290 3555 -X+Y,-X,Z+1/3
REMARK 290 4555 Y,X,-Z
REMARK 290 5555 X-Y,-Y,-Z+1/3
REMARK 290 6555 -X,-X+Y,-Z+2/3
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 80.03867
REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000
REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 40.01933
REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000
REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 40.01933
REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000
REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000
REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 80.03867
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 TOTAL BURIED SURFACE AREA: 6440 ANGSTROM**2
REMARK 350 SURFACE AREA OF THE COMPLEX: 30140 ANGSTROM**2
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -68.0 KCAL/MOL
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET A 1
REMARK 465 VAL A 2
REMARK 465 ALA A 3
REMARK 465 THR A 4
REMARK 465 THR A 5
REMARK 465 SER A 6
REMARK 465 SER A 7
REMARK 465 GLY A 8
REMARK 465 GLY A 9
REMARK 465 SER A 10
REMARK 465 MET B 1
REMARK 465 SER B 2
REMARK 465 VAL B 3
REMARK 465 THR B 4
REMARK 465 PRO B 186
REMARK 465 GLY B 187
REMARK 465 ARG B 188
REMARK 465 GLY B 189
REMARK 465 ILE B 190
REMARK 465 GLY B 191
REMARK 465 ARG B 192
REMARK 465 LEU B 193
REMARK 465 THR B 227
REMARK 465 PHE B 228
REMARK 465 THR B 308
REMARK 465 THR B 309
REMARK 465 ASP B 310
REMARK 465 SER B 311
REMARK 465 ASP B 312
REMARK 465 ALA B 313
REMARK 465 VAL B 376
REMARK 465 GLY B 377
REMARK 465 ASN B 378
REMARK 465 ASP B 379
REMARK 465 ALA B 380
REMARK 465 GLY B 381
REMARK 465 ARG B 382
REMARK 465 ALA B 383
REMARK 465 ALA B 384
REMARK 465 GLY B 385
REMARK 465 ARG B 386
REMARK 465 LEU B 387
REMARK 465 GLU B 388
REMARK 465 HIS B 389
REMARK 465 HIS B 390
REMARK 465 HIS B 391
REMARK 465 HIS B 392
REMARK 465 HIS B 393
REMARK 465 HIS B 394
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 HIS A 200 54.49 -91.36
REMARK 500 HIS A 246 8.80 56.07
REMARK 500 GLN A 309 58.69 -92.57
REMARK 500 ASP B 9 75.06 -108.22
REMARK 500 ILE B 55 -63.89 -100.38
REMARK 500 ASP B 146 63.78 33.40
REMARK 500 SER B 315 -7.43 -153.44
REMARK 500 PRO B 357 46.46 -77.10
REMARK 500
REMARK 500 REMARK: NULL
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 MG A 402 MG
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 SER A 35 OG
REMARK 620 2 AGS A 401 O3G 170.4
REMARK 620 3 AGS A 401 O2B 86.2 85.8
REMARK 620 4 HOH A 532 O 84.9 90.6 95.7
REMARK 620 5 HOH A 545 O 81.8 103.1 87.5 166.1
REMARK 620 6 HOH A 565 O 88.0 100.5 171.2 90.4 85.1
REMARK 620 N 1 2 3 4 5
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 MG B 402 MG
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 THR B 33 OG1
REMARK 620 2 ASP B 56 OD1 90.9
REMARK 620 3 ADP B 401 O3B 90.7 166.4
REMARK 620 4 HOH B 506 O 177.6 89.9 89.1
REMARK 620 5 HOH B 516 O 83.9 93.6 100.1 93.8
REMARK 620 6 HOH B 522 O 83.4 81.3 85.4 98.9 166.3
REMARK 620 N 1 2 3 4 5
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue AGS A 401
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 402
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue ADP B 401
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 402
DBREF 6BS4 A 1 340 UNP P9WKX5 Y3679_MYCTU 1 340
DBREF1 6BS4 B 1 386 UNP A0A089QYG8_MYCTU
DBREF2 6BS4 B A0A089QYG8 1 386
SEQADV 6BS4 LEU B 387 UNP A0A089QYG EXPRESSION TAG
SEQADV 6BS4 GLU B 388 UNP A0A089QYG EXPRESSION TAG
SEQADV 6BS4 HIS B 389 UNP A0A089QYG EXPRESSION TAG
SEQADV 6BS4 HIS B 390 UNP A0A089QYG EXPRESSION TAG
SEQADV 6BS4 HIS B 391 UNP A0A089QYG EXPRESSION TAG
SEQADV 6BS4 HIS B 392 UNP A0A089QYG EXPRESSION TAG
SEQADV 6BS4 HIS B 393 UNP A0A089QYG EXPRESSION TAG
SEQADV 6BS4 HIS B 394 UNP A0A089QYG EXPRESSION TAG
SEQRES 1 A 340 MET VAL ALA THR THR SER SER GLY GLY SER SER VAL GLY
SEQRES 2 A 340 TRP PRO SER ARG LEU SER GLY VAL ARG LEU HIS LEU VAL
SEQRES 3 A 340 THR GLY LYS GLY GLY THR GLY LYS SER THR ILE ALA ALA
SEQRES 4 A 340 ALA LEU ALA LEU THR LEU ALA ALA GLY GLY ARG LYS VAL
SEQRES 5 A 340 LEU LEU VAL GLU VAL GLU GLY ARG GLN GLY ILE ALA GLN
SEQRES 6 A 340 LEU PHE ASP VAL PRO PRO LEU PRO TYR GLN GLU LEU LYS
SEQRES 7 A 340 ILE ALA THR ALA GLU ARG GLY GLY GLN VAL ASN ALA LEU
SEQRES 8 A 340 ALA ILE ASP ILE GLU ALA ALA PHE LEU GLU TYR LEU ASP
SEQRES 9 A 340 MET PHE TYR ASN LEU GLY ILE ALA GLY ARG ALA MET ARG
SEQRES 10 A 340 ARG ILE GLY ALA VAL GLU PHE ALA THR THR ILE ALA PRO
SEQRES 11 A 340 GLY LEU ARG ASP VAL LEU LEU THR GLY LYS ILE LYS GLU
SEQRES 12 A 340 THR VAL VAL ARG LEU ASP LYS ASN LYS LEU PRO VAL TYR
SEQRES 13 A 340 ASP ALA ILE VAL VAL ASP ALA PRO PRO THR GLY ARG ILE
SEQRES 14 A 340 ALA ARG PHE LEU ASP VAL THR LYS ALA VAL SER ASP LEU
SEQRES 15 A 340 ALA LYS GLY GLY PRO VAL HIS ALA GLN SER GLU GLY VAL
SEQRES 16 A 340 VAL LYS LEU LEU HIS SER ASN GLN THR ALA ILE HIS LEU
SEQRES 17 A 340 VAL THR LEU LEU GLU ALA LEU PRO VAL GLN GLU THR LEU
SEQRES 18 A 340 GLU ALA ILE GLU GLU LEU ALA GLN MET GLU LEU PRO ILE
SEQRES 19 A 340 GLY SER VAL ILE VAL ASN ARG ASN ILE PRO ALA HIS LEU
SEQRES 20 A 340 GLU PRO GLN ASP LEU ALA LYS ALA ALA GLU GLY GLU VAL
SEQRES 21 A 340 ASP ALA ASP SER VAL ARG ALA GLY LEU LEU THR ALA GLY
SEQRES 22 A 340 VAL LYS LEU PRO ASP ALA ASP PHE ALA GLY LEU LEU THR
SEQRES 23 A 340 GLU THR ILE GLN HIS ALA THR ARG ILE THR ALA ARG ALA
SEQRES 24 A 340 GLU ILE ALA GLN GLN LEU ASP ALA LEU GLN VAL PRO ARG
SEQRES 25 A 340 LEU GLU LEU PRO THR VAL SER ASP GLY VAL ASP LEU GLY
SEQRES 26 A 340 SER LEU TYR GLU LEU SER GLU SER LEU ALA GLN GLN GLY
SEQRES 27 A 340 VAL ARG
SEQRES 1 B 394 MET SER VAL THR PRO LYS THR LEU ASP MET GLY ALA ILE
SEQRES 2 B 394 LEU ALA ASP THR SER ASN ARG VAL VAL VAL CYS CYS GLY
SEQRES 3 B 394 ALA GLY GLY VAL GLY LYS THR THR THR ALA ALA ALA LEU
SEQRES 4 B 394 ALA LEU ARG ALA ALA GLU TYR GLY ARG THR VAL VAL VAL
SEQRES 5 B 394 LEU THR ILE ASP PRO ALA LYS ARG LEU ALA GLN ALA LEU
SEQRES 6 B 394 GLY ILE ASN ASP LEU GLY ASN THR PRO GLN ARG VAL PRO
SEQRES 7 B 394 LEU ALA PRO GLU VAL PRO GLY GLU LEU HIS ALA MET MET
SEQRES 8 B 394 LEU ASP MET ARG ARG THR PHE ASP GLU MET VAL MET GLN
SEQRES 9 B 394 TYR SER GLY PRO GLU ARG ALA GLN SER ILE LEU ASP ASN
SEQRES 10 B 394 GLN PHE TYR GLN THR VAL ALA THR SER LEU ALA GLY THR
SEQRES 11 B 394 GLN GLU TYR MET ALA MET GLU LYS LEU GLY GLN LEU LEU
SEQRES 12 B 394 SER GLN ASP ARG TRP ASP LEU ILE VAL VAL ASP THR PRO
SEQRES 13 B 394 PRO SER ARG ASN ALA LEU ASP PHE LEU ASP ALA PRO LYS
SEQRES 14 B 394 ARG LEU GLY SER PHE MET ASP SER ARG LEU TRP ARG LEU
SEQRES 15 B 394 LEU LEU ALA PRO GLY ARG GLY ILE GLY ARG LEU ILE THR
SEQRES 16 B 394 GLY VAL MET GLY LEU ALA MET LYS ALA LEU SER THR VAL
SEQRES 17 B 394 LEU GLY SER GLN MET LEU ALA ASP ALA ALA ALA PHE VAL
SEQRES 18 B 394 GLN SER LEU ASP ALA THR PHE GLY GLY PHE ARG GLU LYS
SEQRES 19 B 394 ALA ASP ARG THR TYR ALA LEU LEU LYS ARG ARG GLY THR
SEQRES 20 B 394 GLN PHE VAL VAL VAL SER ALA ALA GLU PRO ASP ALA LEU
SEQRES 21 B 394 ARG GLU ALA SER PHE PHE VAL ASP ARG LEU SER GLN GLU
SEQRES 22 B 394 SER MET PRO LEU ALA GLY LEU VAL PHE ASN ARG THR HIS
SEQRES 23 B 394 PRO MET LEU CYS ALA LEU PRO ILE GLU ARG ALA ILE ASP
SEQRES 24 B 394 ALA ALA GLU THR LEU ASP ALA GLU THR THR ASP SER ASP
SEQRES 25 B 394 ALA THR SER LEU ALA ALA ALA VAL LEU ARG ILE HIS ALA
SEQRES 26 B 394 GLU ARG GLY GLN THR ALA LYS ARG GLU ILE ARG LEU LEU
SEQRES 27 B 394 SER ARG PHE THR GLY ALA ASN PRO THR VAL PRO VAL VAL
SEQRES 28 B 394 GLY VAL PRO SER LEU PRO PHE ASP VAL SER ASP LEU GLU
SEQRES 29 B 394 ALA LEU ARG ALA LEU ALA ASP GLN LEU THR THR VAL GLY
SEQRES 30 B 394 ASN ASP ALA GLY ARG ALA ALA GLY ARG LEU GLU HIS HIS
SEQRES 31 B 394 HIS HIS HIS HIS
HET AGS A 401 31
HET MG A 402 1
HET ADP B 401 39
HET MG B 402 1
HETNAM AGS PHOSPHOTHIOPHOSPHORIC ACID-ADENYLATE ESTER
HETNAM MG MAGNESIUM ION
HETNAM ADP ADENOSINE-5'-DIPHOSPHATE
HETSYN AGS ATP-GAMMA-S; ADENOSINE 5'-(3-THIOTRIPHOSPHATE);
HETSYN 2 AGS ADENOSINE 5'-(GAMMA-THIOTRIPHOSPHATE); ADENOSINE-5'-
HETSYN 3 AGS DIPHOSPHATE MONOTHIOPHOSPHATE
FORMUL 3 AGS C10 H16 N5 O12 P3 S
FORMUL 4 MG 2(MG 2+)
FORMUL 5 ADP C10 H15 N5 O10 P2
FORMUL 7 HOH *207(H2 O)
HELIX 1 AA1 PRO A 15 VAL A 21 5 7
HELIX 2 AA2 GLY A 33 ALA A 47 1 15
HELIX 3 AA3 GLN A 61 ASP A 68 1 8
HELIX 4 AA4 ASP A 94 ASN A 108 1 15
HELIX 5 AA5 LEU A 109 ARG A 118 1 10
HELIX 6 AA6 GLY A 120 ALA A 129 1 10
HELIX 7 AA7 ALA A 129 ARG A 147 1 19
HELIX 8 AA8 ARG A 168 LEU A 173 1 6
HELIX 9 AA9 ASP A 174 ASP A 181 1 8
HELIX 10 AB1 PRO A 187 HIS A 200 1 14
HELIX 11 AB2 GLU A 213 MET A 230 1 18
HELIX 12 AB3 GLU A 248 ALA A 256 1 9
HELIX 13 AB4 ASP A 261 ALA A 272 1 12
HELIX 14 AB5 PRO A 277 GLN A 303 1 27
HELIX 15 AB6 GLN A 304 ASP A 306 5 3
HELIX 16 AB7 ASP A 323 GLN A 337 1 15
HELIX 17 AB8 ASP B 9 ASP B 16 1 8
HELIX 18 AB9 GLY B 31 TYR B 46 1 16
HELIX 19 AC1 ALA B 58 LEU B 65 1 8
HELIX 20 AC2 ASP B 93 GLY B 107 1 15
HELIX 21 AC3 GLY B 107 ASN B 117 1 11
HELIX 22 AC4 ASN B 117 VAL B 123 1 7
HELIX 23 AC5 ALA B 124 LEU B 127 5 4
HELIX 24 AC6 GLY B 129 GLN B 145 1 17
HELIX 25 AC7 LEU B 162 ASP B 176 1 15
HELIX 26 AC8 ARG B 178 LEU B 184 1 7
HELIX 27 AC9 GLY B 196 LEU B 209 1 14
HELIX 28 AD1 GLY B 210 ASP B 225 1 16
HELIX 29 AD2 GLY B 230 LEU B 241 1 12
HELIX 30 AD3 LEU B 242 ARG B 244 5 3
HELIX 31 AD4 GLU B 256 GLU B 273 1 18
HELIX 32 AD5 PRO B 293 ALA B 306 1 14
HELIX 33 AD6 SER B 315 ASN B 345 1 31
HELIX 34 AD7 ASP B 362 THR B 374 1 13
SHEET 1 AA1 8 LEU A 77 ALA A 82 0
SHEET 2 AA1 8 GLY A 86 ALA A 92 -1 O ALA A 90 N LEU A 77
SHEET 3 AA1 8 LYS A 51 GLU A 56 1 N LEU A 54 O ASN A 89
SHEET 4 AA1 8 ALA A 158 ASP A 162 1 O VAL A 160 N LEU A 53
SHEET 5 AA1 8 LEU A 23 GLY A 28 1 N HIS A 24 O VAL A 161
SHEET 6 AA1 8 THR A 204 THR A 210 1 O HIS A 207 N LEU A 25
SHEET 7 AA1 8 ILE A 234 ASN A 242 1 O GLY A 235 N ILE A 206
SHEET 8 AA1 8 ARG A 312 PRO A 316 1 O LEU A 313 N VAL A 239
SHEET 1 AA2 8 GLN B 75 VAL B 77 0
SHEET 2 AA2 8 GLU B 86 MET B 91 -1 O LEU B 87 N VAL B 77
SHEET 3 AA2 8 THR B 49 THR B 54 1 N VAL B 50 O GLU B 86
SHEET 4 AA2 8 LEU B 150 ASP B 154 1 O VAL B 152 N LEU B 53
SHEET 5 AA2 8 VAL B 21 CYS B 25 1 N VAL B 22 O VAL B 153
SHEET 6 AA2 8 THR B 247 ALA B 254 1 O VAL B 252 N CYS B 25
SHEET 7 AA2 8 LEU B 277 THR B 285 1 O ALA B 278 N PHE B 249
SHEET 8 AA2 8 VAL B 350 PRO B 354 1 O VAL B 353 N PHE B 282
LINK OG SER A 35 MG MG A 402 1555 1555 2.23
LINK O3G AGS A 401 MG MG A 402 1555 1555 2.06
LINK O2B AGS A 401 MG MG A 402 1555 1555 2.19
LINK MG MG A 402 O HOH A 532 1555 1555 2.15
LINK MG MG A 402 O HOH A 545 1555 1555 2.10
LINK MG MG A 402 O HOH A 565 1555 1555 2.01
LINK OG1 THR B 33 MG MG B 402 1555 1555 2.19
LINK OD1 ASP B 56 MG MG B 402 1555 1555 2.17
LINK O3B ADP B 401 MG MG B 402 1555 1555 2.00
LINK MG MG B 402 O HOH B 506 1555 1555 1.99
LINK MG MG B 402 O HOH B 516 1555 1555 2.08
LINK MG MG B 402 O HOH B 522 1555 1555 2.37
SITE 1 AC1 21 GLY A 30 GLY A 31 THR A 32 GLY A 33
SITE 2 AC1 21 LYS A 34 SER A 35 THR A 36 ARG A 60
SITE 3 AC1 21 ASN A 240 ARG A 241 PRO A 316 THR A 317
SITE 4 AC1 21 VAL A 318 VAL A 322 MG A 402 HOH A 503
SITE 5 AC1 21 HOH A 532 HOH A 545 HOH A 547 ARG B 159
SITE 6 AC1 21 ASP B 258
SITE 1 AC2 5 SER A 35 AGS A 401 HOH A 532 HOH A 545
SITE 2 AC2 5 HOH A 565
SITE 1 AC3 24 GLY B 29 VAL B 30 GLY B 31 LYS B 32
SITE 2 AC3 24 THR B 33 THR B 34 ASN B 283 ARG B 284
SITE 3 AC3 24 VAL B 353 PRO B 354 SER B 355 LEU B 356
SITE 4 AC3 24 ASP B 359 VAL B 360 LEU B 369 MG B 402
SITE 5 AC3 24 HOH B 506 HOH B 510 HOH B 522 HOH B 528
SITE 6 AC3 24 HOH B 531 HOH B 560 HOH B 568 HOH B 571
SITE 1 AC4 6 THR B 33 ASP B 56 ADP B 401 HOH B 506
SITE 2 AC4 6 HOH B 516 HOH B 522
CRYST1 121.629 121.629 120.058 90.00 90.00 120.00 P 32 2 1 6
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.008222 0.004747 0.000000 0.00000
SCALE2 0.000000 0.009494 0.000000 0.00000
SCALE3 0.000000 0.000000 0.008329 0.00000