HEADER SIGNALING PROTEIN 04-DEC-17 6BSZ TITLE HUMAN MGLU8 RECEPTOR COMPLEXED WITH GLUTAMATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: METABOTROPIC GLUTAMATE RECEPTOR 8; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: MGLUR8; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GRM8, GPRC1H, MGLUR8; SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS MGLUR8, GRM8, GLUTAMATE, GENE ID: 2918, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.M.SCHKERYANTZ,Q.CHEN,J.D.HO,S.ATWELL,A.ZHANG,M.C.VARGAS,J.WANG, AUTHOR 2 J.A.MONN,J.HAO REVDAT 6 25-OCT-23 6BSZ 1 REMARK REVDAT 5 15-FEB-23 6BSZ 1 COMPND HET HETNAM HETSYN REVDAT 5 2 1 FORMUL ATOM REVDAT 4 29-JUL-20 6BSZ 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE REVDAT 3 28-FEB-18 6BSZ 1 JRNL REVDAT 2 21-FEB-18 6BSZ 1 JRNL REVDAT 1 07-FEB-18 6BSZ 0 JRNL AUTH J.M.SCHKERYANTZ,Q.CHEN,J.D.HO,S.ATWELL,A.ZHANG,M.C.VARGAS, JRNL AUTH 2 J.WANG,J.A.MONN,J.HAO JRNL TITL DETERMINATION OF L-AP4-BOUND HUMAN MGLU8 RECEPTOR AMINO JRNL TITL 2 TERMINAL DOMAIN STRUCTURE AND THE MOLECULAR BASIS FOR JRNL TITL 3 L-AP4'S GROUP III MGLU RECEPTOR FUNCTIONAL POTENCY AND JRNL TITL 4 SELECTIVITY. JRNL REF BIOORG. MED. CHEM. LETT. V. 28 612 2018 JRNL REFN ESSN 1464-3405 JRNL PMID 29402739 JRNL DOI 10.1016/J.BMCL.2018.01.037 REMARK 2 REMARK 2 RESOLUTION. 2.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.91 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 51038 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.252 REMARK 3 R VALUE (WORKING SET) : 0.250 REMARK 3 FREE R VALUE : 0.275 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2658 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.65 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.72 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3656 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.17 REMARK 3 BIN R VALUE (WORKING SET) : 0.3430 REMARK 3 BIN FREE R VALUE SET COUNT : 206 REMARK 3 BIN FREE R VALUE : 0.3960 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6772 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 68 REMARK 3 SOLVENT ATOMS : 121 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.76 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.01000 REMARK 3 B22 (A**2) : 0.88000 REMARK 3 B33 (A**2) : -0.87000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.371 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.274 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.218 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 10.296 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.897 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.875 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6993 ; 0.005 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9481 ; 0.790 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 874 ; 3.889 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 303 ;31.102 ;24.059 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1147 ;13.745 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 39 ;11.850 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1050 ; 0.051 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5281 ; 0.003 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6BSZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1000231398. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-OCT-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 51038 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.650 REMARK 200 RESOLUTION RANGE LOW (A) : 19.940 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.79 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: RAT MGLU7 (RMGLU) ATD (PDB: 2D4Z) REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.66 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.67 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM SODIUM CITRATE PH 6, 1.6 M REMARK 280 AMMONIUM SULFATE, 0.2 M SODIUM POTASSIUM TARTRATE, AND 5 MM L- REMARK 280 GLUTAMATE., VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 56.26950 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 83.31150 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 99.33050 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 56.26950 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 83.31150 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 99.33050 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 56.26950 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 83.31150 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 99.33050 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 56.26950 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 83.31150 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 99.33050 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 123 REMARK 465 ILE A 124 REMARK 465 GLU A 125 REMARK 465 LYS A 126 REMARK 465 ASP A 127 REMARK 465 ALA A 128 REMARK 465 SER A 129 REMARK 465 ASP A 130 REMARK 465 VAL A 131 REMARK 465 LYS A 132 REMARK 465 CYS A 133 REMARK 465 ALA A 134 REMARK 465 ASN A 135 REMARK 465 GLY A 136 REMARK 465 ASP A 137 REMARK 465 PRO A 138 REMARK 465 PRO A 139 REMARK 465 ILE A 140 REMARK 465 PHE A 141 REMARK 465 THR A 142 REMARK 465 LYS A 143 REMARK 465 PRO A 144 REMARK 465 ASP A 145 REMARK 465 GLY A 372 REMARK 465 SER A 373 REMARK 465 HIS A 374 REMARK 465 GLY A 375 REMARK 465 LYS A 376 REMARK 465 ARG A 377 REMARK 465 ASN A 378 REMARK 465 SER A 379 REMARK 465 HIS A 380 REMARK 465 ILE A 381 REMARK 465 LYS A 382 REMARK 465 ALA B 37 REMARK 465 LEU B 123 REMARK 465 ILE B 124 REMARK 465 GLU B 125 REMARK 465 LYS B 126 REMARK 465 ASP B 127 REMARK 465 ALA B 128 REMARK 465 SER B 129 REMARK 465 ASP B 130 REMARK 465 VAL B 131 REMARK 465 LYS B 132 REMARK 465 CYS B 133 REMARK 465 ALA B 134 REMARK 465 ASN B 135 REMARK 465 GLY B 136 REMARK 465 ASP B 137 REMARK 465 PRO B 138 REMARK 465 PRO B 139 REMARK 465 ILE B 140 REMARK 465 PHE B 141 REMARK 465 THR B 142 REMARK 465 LYS B 143 REMARK 465 PRO B 144 REMARK 465 ASP B 145 REMARK 465 GLY B 372 REMARK 465 SER B 373 REMARK 465 HIS B 374 REMARK 465 GLY B 375 REMARK 465 LYS B 376 REMARK 465 ARG B 377 REMARK 465 ASN B 378 REMARK 465 SER B 379 REMARK 465 HIS B 380 REMARK 465 ILE B 381 REMARK 465 LYS B 382 REMARK 465 ALA B 505 REMARK 465 HIS B 506 REMARK 465 ARG B 507 REMARK 465 GLU B 508 REMARK 465 HIS B 509 REMARK 465 THR B 510 REMARK 465 HIS B 511 REMARK 465 PRO B 512 REMARK 465 ALA B 513 REMARK 465 SER B 514 REMARK 465 GLU B 515 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 57 CE NZ REMARK 470 GLU A 59 OE1 OE2 REMARK 470 ARG A 60 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 66 CG CD OE1 OE2 REMARK 470 LYS A 68 CE NZ REMARK 470 LYS A 146 CD CE NZ REMARK 470 ILE A 165 CD1 REMARK 470 ARG A 240 NE CZ NH1 NH2 REMARK 470 LYS A 252 CE NZ REMARK 470 ARG A 258 NE CZ NH1 NH2 REMARK 470 GLU A 263 OE1 OE2 REMARK 470 GLU A 284 OE1 OE2 REMARK 470 ASP A 285 OD1 OD2 REMARK 470 GLU A 323 CD OE1 OE2 REMARK 470 ARG A 354 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 389 NE CZ NH1 NH2 REMARK 470 ARG A 392 CD NE CZ NH1 NH2 REMARK 470 TYR A 427 CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG A 433 NE CZ NH1 NH2 REMARK 470 GLU A 441 CD OE1 OE2 REMARK 470 GLU A 463 CD OE1 OE2 REMARK 470 ASN A 480 CG OD1 ND2 REMARK 470 LYS A 481 CG CD CE NZ REMARK 470 GLU A 500 OE1 OE2 REMARK 470 GLU A 508 CG CD OE1 OE2 REMARK 470 GLU A 515 CG CD OE1 OE2 REMARK 470 ASP B 43 OD1 OD2 REMARK 470 GLU B 59 CG CD OE1 OE2 REMARK 470 ARG B 60 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 66 CG CD OE1 OE2 REMARK 470 LYS B 146 CD CE NZ REMARK 470 ASP B 190 OD1 OD2 REMARK 470 GLN B 237 CD OE1 NE2 REMARK 470 GLU B 241 CG CD OE1 OE2 REMARK 470 ARG B 255 CD NE CZ NH1 NH2 REMARK 470 ARG B 258 NE CZ NH1 NH2 REMARK 470 GLU B 323 CG CD OE1 OE2 REMARK 470 ARG B 346 NE CZ NH1 NH2 REMARK 470 ARG B 354 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 370 CD CE NZ REMARK 470 ARG B 389 NE CZ NH1 NH2 REMARK 470 ARG B 392 NE CZ NH1 NH2 REMARK 470 GLU B 441 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 60 74.40 48.61 REMARK 500 SER A 107 15.89 57.92 REMARK 500 GLN A 121 -45.06 -149.08 REMARK 500 ALA A 153 -152.92 -94.02 REMARK 500 GLN A 298 73.00 50.38 REMARK 500 ASN A 353 53.53 -105.19 REMARK 500 ALA A 391 -11.05 72.69 REMARK 500 ASN A 480 -60.66 -150.68 REMARK 500 ASN A 493 -37.14 69.39 REMARK 500 ARG B 60 -85.26 58.24 REMARK 500 GLN B 121 -30.02 -153.44 REMARK 500 ALA B 153 -152.90 -93.88 REMARK 500 ALA B 177 -31.96 -139.37 REMARK 500 PHE B 281 77.41 -107.04 REMARK 500 ASN B 353 59.27 -108.62 REMARK 500 MET B 434 42.36 -96.37 REMARK 500 THR B 479 -66.48 -96.56 REMARK 500 ASN B 480 -79.52 -111.36 REMARK 500 ASN B 493 -38.82 68.22 REMARK 500 REMARK 500 REMARK: NULL DBREF 6BSZ A 37 514 UNP O00222 GRM8_HUMAN 37 514 DBREF 6BSZ B 37 514 UNP O00222 GRM8_HUMAN 37 514 SEQADV 6BSZ SER A 246 UNP O00222 CYS 246 CONFLICT SEQADV 6BSZ GLN A 298 UNP O00222 ASN 298 CONFLICT SEQADV 6BSZ GLU A 515 UNP O00222 EXPRESSION TAG SEQADV 6BSZ SER B 246 UNP O00222 CYS 246 CONFLICT SEQADV 6BSZ GLN B 298 UNP O00222 ASN 298 CONFLICT SEQADV 6BSZ GLU B 515 UNP O00222 EXPRESSION TAG SEQRES 1 A 479 ALA HIS SER ILE ARG VAL ASP GLY ASP ILE ILE LEU GLY SEQRES 2 A 479 GLY LEU PHE PRO VAL HIS ALA LYS GLY GLU ARG GLY VAL SEQRES 3 A 479 PRO CYS GLY GLU LEU LYS LYS GLU LYS GLY ILE HIS ARG SEQRES 4 A 479 LEU GLU ALA MET LEU TYR ALA ILE ASP GLN ILE ASN LYS SEQRES 5 A 479 ASP PRO ASP LEU LEU SER ASN ILE THR LEU GLY VAL ARG SEQRES 6 A 479 ILE LEU ASP THR CYS SER ARG ASP THR TYR ALA LEU GLU SEQRES 7 A 479 GLN SER LEU THR PHE VAL GLN ALA LEU ILE GLU LYS ASP SEQRES 8 A 479 ALA SER ASP VAL LYS CYS ALA ASN GLY ASP PRO PRO ILE SEQRES 9 A 479 PHE THR LYS PRO ASP LYS ILE SER GLY VAL ILE GLY ALA SEQRES 10 A 479 ALA ALA SER SER VAL SER ILE MET VAL ALA ASN ILE LEU SEQRES 11 A 479 ARG LEU PHE LYS ILE PRO GLN ILE SER TYR ALA SER THR SEQRES 12 A 479 ALA PRO GLU LEU SER ASP ASN THR ARG TYR ASP PHE PHE SEQRES 13 A 479 SER ARG VAL VAL PRO PRO ASP SER TYR GLN ALA GLN ALA SEQRES 14 A 479 MET VAL ASP ILE VAL THR ALA LEU GLY TRP ASN TYR VAL SEQRES 15 A 479 SER THR LEU ALA SER GLU GLY ASN TYR GLY GLU SER GLY SEQRES 16 A 479 VAL GLU ALA PHE THR GLN ILE SER ARG GLU ILE GLY GLY SEQRES 17 A 479 VAL SER ILE ALA GLN SER GLN LYS ILE PRO ARG GLU PRO SEQRES 18 A 479 ARG PRO GLY GLU PHE GLU LYS ILE ILE LYS ARG LEU LEU SEQRES 19 A 479 GLU THR PRO ASN ALA ARG ALA VAL ILE MET PHE ALA ASN SEQRES 20 A 479 GLU ASP ASP ILE ARG ARG ILE LEU GLU ALA ALA LYS LYS SEQRES 21 A 479 LEU GLN GLN SER GLY HIS PHE LEU TRP ILE GLY SER ASP SEQRES 22 A 479 SER TRP GLY SER LYS ILE ALA PRO VAL TYR GLN GLN GLU SEQRES 23 A 479 GLU ILE ALA GLU GLY ALA VAL THR ILE LEU PRO LYS ARG SEQRES 24 A 479 ALA SER ILE ASP GLY PHE ASP ARG TYR PHE ARG SER ARG SEQRES 25 A 479 THR LEU ALA ASN ASN ARG ARG ASN VAL TRP PHE ALA GLU SEQRES 26 A 479 PHE TRP GLU GLU ASN PHE GLY CYS LYS LEU GLY SER HIS SEQRES 27 A 479 GLY LYS ARG ASN SER HIS ILE LYS LYS CYS THR GLY LEU SEQRES 28 A 479 GLU ARG ILE ALA ARG ASP SER SER TYR GLU GLN GLU GLY SEQRES 29 A 479 LYS VAL GLN PHE VAL ILE ASP ALA VAL TYR SER MET ALA SEQRES 30 A 479 TYR ALA LEU HIS ASN MET HIS LYS ASP LEU CYS PRO GLY SEQRES 31 A 479 TYR ILE GLY LEU CYS PRO ARG MET SER THR ILE ASP GLY SEQRES 32 A 479 LYS GLU LEU LEU GLY TYR ILE ARG ALA VAL ASN PHE ASN SEQRES 33 A 479 GLY SER ALA GLY THR PRO VAL THR PHE ASN GLU ASN GLY SEQRES 34 A 479 ASP ALA PRO GLY ARG TYR ASP ILE PHE GLN TYR GLN ILE SEQRES 35 A 479 THR ASN LYS SER THR GLU TYR LYS VAL ILE GLY HIS TRP SEQRES 36 A 479 THR ASN GLN LEU HIS LEU LYS VAL GLU ASP MET GLN TRP SEQRES 37 A 479 ALA HIS ARG GLU HIS THR HIS PRO ALA SER GLU SEQRES 1 B 479 ALA HIS SER ILE ARG VAL ASP GLY ASP ILE ILE LEU GLY SEQRES 2 B 479 GLY LEU PHE PRO VAL HIS ALA LYS GLY GLU ARG GLY VAL SEQRES 3 B 479 PRO CYS GLY GLU LEU LYS LYS GLU LYS GLY ILE HIS ARG SEQRES 4 B 479 LEU GLU ALA MET LEU TYR ALA ILE ASP GLN ILE ASN LYS SEQRES 5 B 479 ASP PRO ASP LEU LEU SER ASN ILE THR LEU GLY VAL ARG SEQRES 6 B 479 ILE LEU ASP THR CYS SER ARG ASP THR TYR ALA LEU GLU SEQRES 7 B 479 GLN SER LEU THR PHE VAL GLN ALA LEU ILE GLU LYS ASP SEQRES 8 B 479 ALA SER ASP VAL LYS CYS ALA ASN GLY ASP PRO PRO ILE SEQRES 9 B 479 PHE THR LYS PRO ASP LYS ILE SER GLY VAL ILE GLY ALA SEQRES 10 B 479 ALA ALA SER SER VAL SER ILE MET VAL ALA ASN ILE LEU SEQRES 11 B 479 ARG LEU PHE LYS ILE PRO GLN ILE SER TYR ALA SER THR SEQRES 12 B 479 ALA PRO GLU LEU SER ASP ASN THR ARG TYR ASP PHE PHE SEQRES 13 B 479 SER ARG VAL VAL PRO PRO ASP SER TYR GLN ALA GLN ALA SEQRES 14 B 479 MET VAL ASP ILE VAL THR ALA LEU GLY TRP ASN TYR VAL SEQRES 15 B 479 SER THR LEU ALA SER GLU GLY ASN TYR GLY GLU SER GLY SEQRES 16 B 479 VAL GLU ALA PHE THR GLN ILE SER ARG GLU ILE GLY GLY SEQRES 17 B 479 VAL SER ILE ALA GLN SER GLN LYS ILE PRO ARG GLU PRO SEQRES 18 B 479 ARG PRO GLY GLU PHE GLU LYS ILE ILE LYS ARG LEU LEU SEQRES 19 B 479 GLU THR PRO ASN ALA ARG ALA VAL ILE MET PHE ALA ASN SEQRES 20 B 479 GLU ASP ASP ILE ARG ARG ILE LEU GLU ALA ALA LYS LYS SEQRES 21 B 479 LEU GLN GLN SER GLY HIS PHE LEU TRP ILE GLY SER ASP SEQRES 22 B 479 SER TRP GLY SER LYS ILE ALA PRO VAL TYR GLN GLN GLU SEQRES 23 B 479 GLU ILE ALA GLU GLY ALA VAL THR ILE LEU PRO LYS ARG SEQRES 24 B 479 ALA SER ILE ASP GLY PHE ASP ARG TYR PHE ARG SER ARG SEQRES 25 B 479 THR LEU ALA ASN ASN ARG ARG ASN VAL TRP PHE ALA GLU SEQRES 26 B 479 PHE TRP GLU GLU ASN PHE GLY CYS LYS LEU GLY SER HIS SEQRES 27 B 479 GLY LYS ARG ASN SER HIS ILE LYS LYS CYS THR GLY LEU SEQRES 28 B 479 GLU ARG ILE ALA ARG ASP SER SER TYR GLU GLN GLU GLY SEQRES 29 B 479 LYS VAL GLN PHE VAL ILE ASP ALA VAL TYR SER MET ALA SEQRES 30 B 479 TYR ALA LEU HIS ASN MET HIS LYS ASP LEU CYS PRO GLY SEQRES 31 B 479 TYR ILE GLY LEU CYS PRO ARG MET SER THR ILE ASP GLY SEQRES 32 B 479 LYS GLU LEU LEU GLY TYR ILE ARG ALA VAL ASN PHE ASN SEQRES 33 B 479 GLY SER ALA GLY THR PRO VAL THR PHE ASN GLU ASN GLY SEQRES 34 B 479 ASP ALA PRO GLY ARG TYR ASP ILE PHE GLN TYR GLN ILE SEQRES 35 B 479 THR ASN LYS SER THR GLU TYR LYS VAL ILE GLY HIS TRP SEQRES 36 B 479 THR ASN GLN LEU HIS LEU LYS VAL GLU ASP MET GLN TRP SEQRES 37 B 479 ALA HIS ARG GLU HIS THR HIS PRO ALA SER GLU HET GLU A 601 10 HET NAG A 602 14 HET SO4 A 603 5 HET GLU B 601 10 HET NAG B 602 14 HET SO4 B 603 5 HET SO4 B 604 5 HET SO4 B 605 5 HETNAM GLU GLUTAMIC ACID HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM SO4 SULFATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 GLU 2(C5 H9 N O4) FORMUL 4 NAG 2(C8 H15 N O6) FORMUL 5 SO4 4(O4 S 2-) FORMUL 11 HOH *121(H2 O) HELIX 1 AA1 GLY A 72 ASP A 89 1 18 HELIX 2 AA2 ARG A 108 LEU A 117 1 10 HELIX 3 AA3 THR A 118 VAL A 120 5 3 HELIX 4 AA4 ALA A 155 ARG A 167 1 13 HELIX 5 AA5 ALA A 180 ASP A 185 5 6 HELIX 6 AA6 PRO A 198 GLY A 214 1 17 HELIX 7 AA7 GLY A 225 ILE A 242 1 18 HELIX 8 AA8 GLY A 260 LEU A 270 1 11 HELIX 9 AA9 ASN A 283 LEU A 297 1 15 HELIX 10 AB1 ILE A 338 SER A 347 1 10 HELIX 11 AB2 TRP A 358 GLY A 368 1 11 HELIX 12 AB3 LYS A 401 CYS A 424 1 24 HELIX 13 AB4 CYS A 431 SER A 435 5 5 HELIX 14 AB5 ASP A 438 VAL A 449 1 12 HELIX 15 AB6 VAL A 499 MET A 502 5 4 HELIX 16 AB7 GLY B 72 ASP B 89 1 18 HELIX 17 AB8 ARG B 108 LEU B 117 1 10 HELIX 18 AB9 THR B 118 VAL B 120 5 3 HELIX 19 AC1 ALA B 155 ARG B 167 1 13 HELIX 20 AC2 ALA B 180 ASP B 185 5 6 HELIX 21 AC3 PRO B 198 GLY B 214 1 17 HELIX 22 AC4 GLY B 225 ILE B 242 1 18 HELIX 23 AC5 GLY B 260 LEU B 270 1 11 HELIX 24 AC6 ASN B 283 LEU B 297 1 15 HELIX 25 AC7 ILE B 338 SER B 347 1 10 HELIX 26 AC8 TRP B 358 GLY B 368 1 11 HELIX 27 AC9 LYS B 401 CYS B 424 1 24 HELIX 28 AD1 CYS B 431 SER B 435 5 5 HELIX 29 AD2 ASP B 438 ARG B 447 1 10 HELIX 30 AD3 VAL B 499 MET B 502 5 4 SHEET 1 AA1 6 ILE A 40 VAL A 42 0 SHEET 2 AA1 6 LEU A 98 ASP A 104 -1 O VAL A 100 N VAL A 42 SHEET 3 AA1 6 ILE A 46 PHE A 52 1 N GLY A 50 O LEU A 103 SHEET 4 AA1 6 ILE A 147 ILE A 151 1 O GLY A 149 N GLY A 49 SHEET 5 AA1 6 GLN A 173 SER A 175 1 O ILE A 174 N VAL A 150 SHEET 6 AA1 6 PHE A 192 ARG A 194 1 O SER A 193 N GLN A 173 SHEET 1 AA2 2 HIS A 55 LYS A 57 0 SHEET 2 AA2 2 CYS A 64 LEU A 67 -1 O GLY A 65 N ALA A 56 SHEET 1 AA3 8 SER A 246 ILE A 253 0 SHEET 2 AA3 8 TYR A 217 SER A 223 1 N ALA A 222 O ILE A 253 SHEET 3 AA3 8 ALA A 277 PHE A 281 1 O ILE A 279 N LEU A 221 SHEET 4 AA3 8 LEU A 304 GLY A 307 1 O ILE A 306 N MET A 280 SHEET 5 AA3 8 VAL A 329 PRO A 333 1 O VAL A 329 N GLY A 307 SHEET 6 AA3 8 ARG A 470 ILE A 478 -1 O ASP A 472 N LEU A 332 SHEET 7 AA3 8 THR A 483 THR A 492 -1 O GLY A 489 N ILE A 473 SHEET 8 AA3 8 LEU A 495 LEU A 497 -1 O HIS A 496 N HIS A 490 SHEET 1 AA4 2 PHE A 451 ASN A 452 0 SHEET 2 AA4 2 PRO A 458 VAL A 459 -1 O VAL A 459 N PHE A 451 SHEET 1 AA5 6 ILE B 40 VAL B 42 0 SHEET 2 AA5 6 LEU B 98 ASP B 104 -1 O VAL B 100 N VAL B 42 SHEET 3 AA5 6 ILE B 46 PHE B 52 1 N ILE B 46 O GLY B 99 SHEET 4 AA5 6 ILE B 147 ILE B 151 1 O GLY B 149 N GLY B 49 SHEET 5 AA5 6 GLN B 173 SER B 175 1 O ILE B 174 N VAL B 150 SHEET 6 AA5 6 PHE B 192 ARG B 194 1 O SER B 193 N SER B 175 SHEET 1 AA6 2 HIS B 55 LYS B 57 0 SHEET 2 AA6 2 CYS B 64 LEU B 67 -1 O GLY B 65 N ALA B 56 SHEET 1 AA7 8 SER B 246 ILE B 253 0 SHEET 2 AA7 8 TYR B 217 SER B 223 1 N ALA B 222 O ILE B 253 SHEET 3 AA7 8 ALA B 277 PHE B 281 1 O ILE B 279 N SER B 219 SHEET 4 AA7 8 LEU B 304 GLY B 307 1 O ILE B 306 N MET B 280 SHEET 5 AA7 8 VAL B 329 PRO B 333 1 O VAL B 329 N TRP B 305 SHEET 6 AA7 8 ARG B 470 ILE B 478 -1 O ASP B 472 N LEU B 332 SHEET 7 AA7 8 THR B 483 THR B 492 -1 O GLY B 489 N ILE B 473 SHEET 8 AA7 8 LEU B 495 LEU B 497 -1 O HIS B 496 N HIS B 490 SHEET 1 AA8 2 PHE B 451 ASN B 452 0 SHEET 2 AA8 2 PRO B 458 VAL B 459 -1 O VAL B 459 N PHE B 451 SSBOND 1 CYS A 64 CYS A 106 1555 1555 2.03 SSBOND 2 CYS A 369 CYS A 384 1555 1555 2.03 SSBOND 3 CYS A 424 CYS A 431 1555 1555 2.04 SSBOND 4 CYS B 64 CYS B 106 1555 1555 2.03 SSBOND 5 CYS B 369 CYS B 384 1555 1555 2.03 SSBOND 6 CYS B 424 CYS B 431 1555 1555 2.04 LINK ND2 ASN A 95 C1 NAG A 602 1555 1555 1.45 LINK ND2 ASN B 95 C1 NAG B 602 1555 1555 1.44 CISPEP 1 GLY A 152 ALA A 153 0 -2.77 CISPEP 2 GLY B 152 ALA B 153 0 -2.45 CRYST1 112.539 166.623 198.661 90.00 90.00 90.00 I 2 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008886 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006002 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005034 0.00000