HEADER SIGNALING PROTEIN 13-DEC-17 6BVI TITLE RAS:SOS:RAS IN COMPLEX WITH A SMALL MOLECULE ACTIVATOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTPASE HRAS; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: H-RAS-1,HA-RAS,TRANSFORMING PROTEIN P21,C-H-RAS,P21RAS; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: SON OF SEVENLESS HOMOLOG 1; COMPND 9 CHAIN: B; COMPND 10 SYNONYM: SOS-1; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: GTPASE HRAS; COMPND 14 CHAIN: C; COMPND 15 SYNONYM: H-RAS-1,HA-RAS,TRANSFORMING PROTEIN P21,C-H-RAS,P21RAS; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: HRAS, HRAS1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 10 ORGANISM_COMMON: HUMAN; SOURCE 11 ORGANISM_TAXID: 9606; SOURCE 12 GENE: SOS1; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 15 MOL_ID: 3; SOURCE 16 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 17 ORGANISM_COMMON: HUMAN; SOURCE 18 ORGANISM_TAXID: 9606; SOURCE 19 GENE: HRAS, HRAS1; SOURCE 20 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 21 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RAS, SOS, INHIBITOR, ONCOPROTEIN, PROTEIN-PROTEIN COMPLEX, MAPK, KEYWDS 2 SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.PHAN,J.ABBOTT,S.W.FESIK REVDAT 4 15-NOV-23 6BVI 1 REMARK REVDAT 3 04-OCT-23 6BVI 1 LINK REVDAT 2 01-MAY-19 6BVI 1 JRNL REVDAT 1 24-OCT-18 6BVI 0 JRNL AUTH J.R.ABBOTT,T.R.HODGES,R.N.DANIELS,P.A.PATEL,J.P.KENNEDY, JRNL AUTH 2 J.E.HOWES,D.T.AKAN,M.C.BURNS,J.SAI,T.SOBOLIK,Y.BEESETTY, JRNL AUTH 3 T.LEE,O.W.ROSSANESE,J.PHAN,A.G.WATERSON,S.W.FESIK JRNL TITL DISCOVERY OF AMINOPIPERIDINE INDOLES THAT ACTIVATE THE JRNL TITL 2 GUANINE NUCLEOTIDE EXCHANGE FACTOR SOS1 AND MODULATE RAS JRNL TITL 3 SIGNALING. JRNL REF J. MED. CHEM. V. 61 6002 2018 JRNL REFN ISSN 1520-4804 JRNL PMID 29856609 JRNL DOI 10.1021/ACS.JMEDCHEM.8B00360 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH M.C.BURNS,Q.SUN,R.N.DANIELS,D.CAMPER,J.P.KENNEDY,J.PHAN, REMARK 1 AUTH 2 E.T.OLEJNICZAK,T.LEE,A.G.WATERSON,O.W.ROSSANESE,S.W.FESIK REMARK 1 TITL APPROACH FOR TARGETING RAS WITH SMALL MOLECULES THAT REMARK 1 TITL 2 ACTIVATE SOS-MEDIATED NUCLEOTIDE EXCHANGE. REMARK 1 REF PROC. NATL. ACAD. SCI. V. 111 3401 2014 REMARK 1 REF 2 U.S.A. REMARK 1 REFN ESSN 1091-6490 REMARK 1 PMID 24550516 REMARK 1 DOI 10.1073/PNAS.1315798111 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.12RC1_2801: ???) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.82 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 154062 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.169 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 7754 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 42.8283 - 5.4220 0.99 5218 233 0.1671 0.1590 REMARK 3 2 5.4220 - 4.3049 1.00 4990 292 0.1331 0.1384 REMARK 3 3 4.3049 - 3.7611 1.00 4919 295 0.1268 0.1240 REMARK 3 4 3.7611 - 3.4174 1.00 4967 263 0.1361 0.1447 REMARK 3 5 3.4174 - 3.1725 1.00 4930 231 0.1499 0.1681 REMARK 3 6 3.1725 - 2.9855 1.00 4939 249 0.1579 0.1724 REMARK 3 7 2.9855 - 2.8360 1.00 4879 280 0.1579 0.1792 REMARK 3 8 2.8360 - 2.7126 1.00 4890 258 0.1618 0.1750 REMARK 3 9 2.7126 - 2.6082 1.00 4912 244 0.1608 0.1980 REMARK 3 10 2.6082 - 2.5182 1.00 4838 303 0.1532 0.1721 REMARK 3 11 2.5182 - 2.4395 1.00 4876 259 0.1577 0.1661 REMARK 3 12 2.4395 - 2.3697 1.00 4891 254 0.1564 0.1744 REMARK 3 13 2.3697 - 2.3074 1.00 4861 275 0.1561 0.1840 REMARK 3 14 2.3074 - 2.2511 1.00 4855 257 0.1565 0.1774 REMARK 3 15 2.2511 - 2.1999 1.00 4838 278 0.1544 0.1717 REMARK 3 16 2.1999 - 2.1531 1.00 4880 257 0.1488 0.1604 REMARK 3 17 2.1531 - 2.1100 1.00 4829 261 0.1497 0.1684 REMARK 3 18 2.1100 - 2.0702 1.00 4880 249 0.1559 0.1891 REMARK 3 19 2.0702 - 2.0332 1.00 4834 260 0.1641 0.1745 REMARK 3 20 2.0332 - 1.9988 1.00 4915 227 0.1642 0.1912 REMARK 3 21 1.9988 - 1.9665 1.00 4857 245 0.1702 0.1966 REMARK 3 22 1.9665 - 1.9363 1.00 4807 273 0.1806 0.1955 REMARK 3 23 1.9363 - 1.9078 1.00 4829 290 0.1830 0.1954 REMARK 3 24 1.9078 - 1.8809 1.00 4779 288 0.1820 0.2184 REMARK 3 25 1.8809 - 1.8555 1.00 4892 248 0.1892 0.2163 REMARK 3 26 1.8555 - 1.8314 1.00 4863 225 0.1924 0.2076 REMARK 3 27 1.8314 - 1.8085 1.00 4862 238 0.1959 0.2279 REMARK 3 28 1.8085 - 1.7867 1.00 4853 232 0.2103 0.2321 REMARK 3 29 1.7867 - 1.7659 1.00 4862 269 0.2149 0.2396 REMARK 3 30 1.7659 - 1.7461 0.94 4563 221 0.2342 0.2636 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.430 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 7124 REMARK 3 ANGLE : 0.843 9678 REMARK 3 CHIRALITY : 0.053 1048 REMARK 3 PLANARITY : 0.005 1305 REMARK 3 DIHEDRAL : 14.742 4399 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 17 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 36 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.5705 50.3067 62.3869 REMARK 3 T TENSOR REMARK 3 T11: 0.1382 T22: 0.1504 REMARK 3 T33: 0.1403 T12: -0.0271 REMARK 3 T13: 0.0136 T23: -0.0109 REMARK 3 L TENSOR REMARK 3 L11: 0.0642 L22: 0.0755 REMARK 3 L33: 0.0846 L12: 0.0658 REMARK 3 L13: 0.0162 L23: 0.0494 REMARK 3 S TENSOR REMARK 3 S11: 0.0341 S12: 0.0114 S13: -0.0058 REMARK 3 S21: -0.0230 S22: 0.0184 S23: 0.0784 REMARK 3 S31: 0.0789 S32: -0.0347 S33: -0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 37 THROUGH 52 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.2099 45.1622 56.7858 REMARK 3 T TENSOR REMARK 3 T11: 0.1510 T22: 0.1705 REMARK 3 T33: 0.1292 T12: -0.0460 REMARK 3 T13: 0.0180 T23: -0.0115 REMARK 3 L TENSOR REMARK 3 L11: 0.0259 L22: -0.0023 REMARK 3 L33: 0.0510 L12: 0.0092 REMARK 3 L13: 0.0673 L23: 0.0016 REMARK 3 S TENSOR REMARK 3 S11: -0.0096 S12: -0.1093 S13: -0.0074 REMARK 3 S21: 0.0610 S22: 0.0374 S23: -0.0310 REMARK 3 S31: -0.0587 S32: 0.1007 S33: 0.0000 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 53 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.0570 46.1061 73.3857 REMARK 3 T TENSOR REMARK 3 T11: 0.2030 T22: 0.1707 REMARK 3 T33: 0.1284 T12: -0.0377 REMARK 3 T13: 0.0254 T23: 0.0105 REMARK 3 L TENSOR REMARK 3 L11: 0.0323 L22: 0.0107 REMARK 3 L33: 0.0261 L12: 0.0238 REMARK 3 L13: 0.0467 L23: 0.0015 REMARK 3 S TENSOR REMARK 3 S11: -0.0125 S12: -0.0688 S13: -0.1303 REMARK 3 S21: 0.1226 S22: -0.0358 S23: 0.0643 REMARK 3 S31: 0.1640 S32: -0.0536 S33: -0.0000 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 77 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.2248 57.1853 74.6427 REMARK 3 T TENSOR REMARK 3 T11: 0.1567 T22: 0.1659 REMARK 3 T33: 0.1238 T12: -0.0414 REMARK 3 T13: 0.0185 T23: -0.0316 REMARK 3 L TENSOR REMARK 3 L11: 0.0438 L22: 0.0754 REMARK 3 L33: -0.0029 L12: 0.0513 REMARK 3 L13: 0.0276 L23: 0.0168 REMARK 3 S TENSOR REMARK 3 S11: 0.0950 S12: -0.1787 S13: 0.0775 REMARK 3 S21: 0.1070 S22: -0.0281 S23: 0.0264 REMARK 3 S31: -0.0350 S32: 0.0392 S33: 0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 117 THROUGH 151 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.6778 66.1821 65.8379 REMARK 3 T TENSOR REMARK 3 T11: 0.1716 T22: 0.1200 REMARK 3 T33: 0.1889 T12: -0.0254 REMARK 3 T13: 0.0326 T23: -0.0207 REMARK 3 L TENSOR REMARK 3 L11: 0.0382 L22: 0.0855 REMARK 3 L33: 0.0584 L12: 0.1324 REMARK 3 L13: -0.0831 L23: -0.0743 REMARK 3 S TENSOR REMARK 3 S11: 0.0724 S12: -0.0059 S13: 0.1597 REMARK 3 S21: -0.0098 S22: -0.0221 S23: 0.1012 REMARK 3 S31: -0.1092 S32: 0.0782 S33: -0.0000 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 152 THROUGH 166 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.6171 54.1505 60.7577 REMARK 3 T TENSOR REMARK 3 T11: 0.1543 T22: 0.1870 REMARK 3 T33: 0.1341 T12: -0.0483 REMARK 3 T13: 0.0131 T23: -0.0140 REMARK 3 L TENSOR REMARK 3 L11: 0.0147 L22: -0.0066 REMARK 3 L33: 0.0182 L12: -0.0307 REMARK 3 L13: -0.0218 L23: -0.0000 REMARK 3 S TENSOR REMARK 3 S11: 0.0407 S12: 0.0188 S13: 0.0882 REMARK 3 S21: -0.0061 S22: -0.0682 S23: -0.0323 REMARK 3 S31: -0.1231 S32: 0.1808 S33: -0.0000 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 565 THROUGH 699 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.4042 30.6756 80.2422 REMARK 3 T TENSOR REMARK 3 T11: 0.1357 T22: 0.1378 REMARK 3 T33: 0.1018 T12: -0.0156 REMARK 3 T13: 0.0007 T23: 0.0035 REMARK 3 L TENSOR REMARK 3 L11: 0.0515 L22: 0.1249 REMARK 3 L33: 0.2077 L12: -0.1089 REMARK 3 L13: -0.1871 L23: 0.0556 REMARK 3 S TENSOR REMARK 3 S11: -0.0138 S12: -0.0171 S13: 0.0180 REMARK 3 S21: 0.0120 S22: 0.0343 S23: -0.0030 REMARK 3 S31: 0.0054 S32: 0.0851 S33: -0.0000 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 700 THROUGH 818 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.3851 40.2530 49.1384 REMARK 3 T TENSOR REMARK 3 T11: 0.1021 T22: 0.1133 REMARK 3 T33: 0.1151 T12: -0.0053 REMARK 3 T13: 0.0057 T23: 0.0050 REMARK 3 L TENSOR REMARK 3 L11: 0.1067 L22: -0.0319 REMARK 3 L33: 0.3345 L12: 0.1278 REMARK 3 L13: -0.0519 L23: -0.0400 REMARK 3 S TENSOR REMARK 3 S11: 0.0033 S12: 0.0075 S13: 0.0115 REMARK 3 S21: -0.0126 S22: 0.0112 S23: 0.0381 REMARK 3 S31: -0.0439 S32: -0.0721 S33: 0.0000 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 819 THROUGH 1046 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.0510 33.1123 32.0262 REMARK 3 T TENSOR REMARK 3 T11: 0.0663 T22: 0.0693 REMARK 3 T33: 0.0631 T12: -0.0255 REMARK 3 T13: 0.0138 T23: -0.0070 REMARK 3 L TENSOR REMARK 3 L11: 0.1764 L22: 0.2141 REMARK 3 L33: 0.5241 L12: 0.0102 REMARK 3 L13: -0.0807 L23: -0.0571 REMARK 3 S TENSOR REMARK 3 S11: -0.0372 S12: 0.0287 S13: -0.0017 REMARK 3 S21: -0.0268 S22: 0.0225 S23: -0.0257 REMARK 3 S31: 0.0141 S32: 0.0358 S33: -0.0103 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 0 THROUGH 24 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.5623 12.1609 41.7635 REMARK 3 T TENSOR REMARK 3 T11: 0.1168 T22: 0.1211 REMARK 3 T33: 0.2087 T12: 0.0150 REMARK 3 T13: 0.0030 T23: 0.0032 REMARK 3 L TENSOR REMARK 3 L11: 0.0028 L22: 0.0829 REMARK 3 L33: 0.0020 L12: -0.0184 REMARK 3 L13: 0.0265 L23: -0.0467 REMARK 3 S TENSOR REMARK 3 S11: -0.0641 S12: 0.0359 S13: 0.1782 REMARK 3 S21: 0.0774 S22: 0.0285 S23: -0.1290 REMARK 3 S31: 0.0471 S32: 0.0068 S33: -0.0000 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 25 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): 32.2157 12.6716 55.8789 REMARK 3 T TENSOR REMARK 3 T11: 0.2635 T22: 0.1648 REMARK 3 T33: 0.4087 T12: 0.0095 REMARK 3 T13: -0.1055 T23: 0.0661 REMARK 3 L TENSOR REMARK 3 L11: -0.0054 L22: 0.0030 REMARK 3 L33: -0.0001 L12: -0.0073 REMARK 3 L13: -0.0001 L23: -0.0101 REMARK 3 S TENSOR REMARK 3 S11: 0.0604 S12: 0.0805 S13: -0.1168 REMARK 3 S21: 0.0951 S22: 0.0838 S23: 0.0237 REMARK 3 S31: 0.0984 S32: -0.0069 S33: 0.0000 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 35 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.9603 14.3438 46.0613 REMARK 3 T TENSOR REMARK 3 T11: 0.2125 T22: 0.2500 REMARK 3 T33: 0.3990 T12: 0.0622 REMARK 3 T13: -0.0987 T23: 0.0049 REMARK 3 L TENSOR REMARK 3 L11: -0.0058 L22: 0.0115 REMARK 3 L33: 0.0071 L12: 0.0093 REMARK 3 L13: -0.0246 L23: -0.0050 REMARK 3 S TENSOR REMARK 3 S11: 0.0098 S12: -0.0628 S13: 0.0346 REMARK 3 S21: 0.0057 S22: -0.1405 S23: -0.1031 REMARK 3 S31: -0.0705 S32: 0.1595 S33: 0.0046 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 49 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.4083 19.0519 36.2470 REMARK 3 T TENSOR REMARK 3 T11: 0.1103 T22: 0.0922 REMARK 3 T33: 0.1764 T12: -0.0013 REMARK 3 T13: 0.0129 T23: 0.0175 REMARK 3 L TENSOR REMARK 3 L11: 0.0141 L22: 0.1189 REMARK 3 L33: 0.0435 L12: 0.0422 REMARK 3 L13: 0.1016 L23: 0.0833 REMARK 3 S TENSOR REMARK 3 S11: -0.0651 S12: 0.0018 S13: -0.0412 REMARK 3 S21: -0.0182 S22: -0.0302 S23: -0.1724 REMARK 3 S31: -0.0129 S32: -0.0175 S33: -0.0031 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 75 THROUGH 117 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.4273 8.9356 31.5689 REMARK 3 T TENSOR REMARK 3 T11: 0.1320 T22: 0.1153 REMARK 3 T33: 0.1314 T12: 0.0235 REMARK 3 T13: 0.0210 T23: 0.0060 REMARK 3 L TENSOR REMARK 3 L11: -0.0314 L22: 0.1712 REMARK 3 L33: 0.0256 L12: -0.0070 REMARK 3 L13: -0.0907 L23: 0.0004 REMARK 3 S TENSOR REMARK 3 S11: 0.0953 S12: 0.0545 S13: -0.0143 REMARK 3 S21: -0.1197 S22: -0.0416 S23: 0.0139 REMARK 3 S31: 0.0050 S32: 0.0142 S33: -0.0000 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 118 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.0800 -1.8122 36.4687 REMARK 3 T TENSOR REMARK 3 T11: 0.1482 T22: 0.1286 REMARK 3 T33: 0.2070 T12: 0.0098 REMARK 3 T13: 0.0121 T23: -0.0301 REMARK 3 L TENSOR REMARK 3 L11: 0.0246 L22: 0.0185 REMARK 3 L33: 0.0292 L12: -0.0070 REMARK 3 L13: 0.0341 L23: -0.0049 REMARK 3 S TENSOR REMARK 3 S11: 0.1025 S12: -0.0449 S13: 0.0366 REMARK 3 S21: -0.1267 S22: -0.0367 S23: 0.2310 REMARK 3 S31: 0.0601 S32: 0.0420 S33: 0.0000 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 138 THROUGH 151 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.3776 1.1343 43.3065 REMARK 3 T TENSOR REMARK 3 T11: 0.1380 T22: 0.1251 REMARK 3 T33: 0.1385 T12: 0.0218 REMARK 3 T13: 0.0009 T23: -0.0098 REMARK 3 L TENSOR REMARK 3 L11: 0.0146 L22: 0.0333 REMARK 3 L33: 0.0049 L12: -0.0015 REMARK 3 L13: 0.0173 L23: -0.0058 REMARK 3 S TENSOR REMARK 3 S11: -0.0064 S12: -0.0495 S13: 0.0082 REMARK 3 S21: 0.0139 S22: -0.0151 S23: -0.0346 REMARK 3 S31: -0.0622 S32: 0.0273 S33: 0.0000 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 152 THROUGH 166 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.0196 3.4219 37.0246 REMARK 3 T TENSOR REMARK 3 T11: 0.1369 T22: 0.1262 REMARK 3 T33: 0.2146 T12: 0.0362 REMARK 3 T13: 0.0264 T23: -0.0033 REMARK 3 L TENSOR REMARK 3 L11: 0.0166 L22: 0.0253 REMARK 3 L33: 0.0029 L12: -0.0166 REMARK 3 L13: -0.0025 L23: -0.0035 REMARK 3 S TENSOR REMARK 3 S11: 0.0832 S12: -0.0293 S13: 0.0550 REMARK 3 S21: -0.0312 S22: -0.0603 S23: -0.2243 REMARK 3 S31: 0.1673 S32: 0.0432 S33: 0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6BVI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1000231306. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUL-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 154073 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.746 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 11.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.8900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4NYI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM ACETATE, 2.0 M SODIUM REMARK 280 FORMATE, PH 4.0, VAPOR DIFFUSION, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 92.16150 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 92.16150 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 89.54550 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 92.16150 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 92.16150 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 89.54550 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 92.16150 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 92.16150 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 89.54550 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 92.16150 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 92.16150 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 89.54550 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 92.16150 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 92.16150 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 89.54550 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 92.16150 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 92.16150 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 89.54550 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 92.16150 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 92.16150 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 89.54550 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 92.16150 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 92.16150 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 89.54550 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8870 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 35970 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B2832 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 ASN B 591 REMARK 465 MET B 592 REMARK 465 GLN B 593 REMARK 465 PRO B 594 REMARK 465 LYS B 595 REMARK 465 ALA B 596 REMARK 465 ARG B 744 REMARK 465 ASP B 745 REMARK 465 ASN B 746 REMARK 465 GLY B 747 REMARK 465 PRO B 748 REMARK 465 GLY B 749 REMARK 465 HIS B 750 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 2239 O HOH B 2658 1.87 REMARK 500 O HOH B 2282 O HOH B 2732 1.88 REMARK 500 O HOH B 2454 O HOH B 2590 1.88 REMARK 500 O HOH B 2118 O HOH B 2607 1.90 REMARK 500 O HOH B 2320 O HOH B 2646 1.90 REMARK 500 O HOH B 2261 O HOH B 2280 1.90 REMARK 500 O HOH C 301 O HOH C 440 1.92 REMARK 500 O HOH A 306 O HOH A 476 1.94 REMARK 500 O HOH C 395 O HOH C 410 1.96 REMARK 500 O HOH A 413 O HOH A 463 1.99 REMARK 500 O HOH C 326 O HOH C 460 2.00 REMARK 500 OE1 GLN A 129 O HOH A 301 2.02 REMARK 500 O HOH B 2740 O HOH B 2813 2.03 REMARK 500 O HOH C 375 O HOH C 418 2.03 REMARK 500 O HOH B 2199 O HOH B 2636 2.04 REMARK 500 NH2 ARG C 68 O HOH C 301 2.06 REMARK 500 NH1 ARG C 68 O HOH C 302 2.07 REMARK 500 O HOH C 399 O HOH C 521 2.08 REMARK 500 OD1 ASP B 620 O HOH B 2101 2.09 REMARK 500 O HOH B 2708 O HOH B 2758 2.10 REMARK 500 O HOH C 418 O HOH C 467 2.11 REMARK 500 O HOH C 464 O HOH C 505 2.11 REMARK 500 O HOH B 2407 O HOH B 2677 2.11 REMARK 500 O HOH B 2152 O HOH C 467 2.11 REMARK 500 O HOH B 2710 O HOH B 2735 2.12 REMARK 500 O HOH B 2352 O HOH B 2738 2.12 REMARK 500 O HOH C 391 O HOH C 448 2.12 REMARK 500 O HOH B 2145 O HOH B 2747 2.13 REMARK 500 O HOH A 409 O HOH A 476 2.14 REMARK 500 OE2 GLU B 654 O HOH B 2102 2.14 REMARK 500 O HOH B 2256 O HOH B 2649 2.16 REMARK 500 O HOH B 2368 O HOH B 2519 2.17 REMARK 500 O2 FMT C 201 O HOH C 303 2.17 REMARK 500 O HOH B 2482 O HOH B 2688 2.17 REMARK 500 ND1 HIS B 905 O HOH B 2103 2.18 REMARK 500 O HOH B 2299 O HOH B 2329 2.18 REMARK 500 O HOH B 2332 O HOH B 2735 2.18 REMARK 500 O HOH A 315 O HOH A 426 2.18 REMARK 500 O HOH A 393 O HOH A 397 2.18 REMARK 500 O HOH A 471 O HOH B 2218 2.19 REMARK 500 O HOH B 2359 O HOH B 2553 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 2767 O HOH B 2833 7556 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 36 -64.30 -99.40 REMARK 500 ARG A 149 -4.41 82.56 REMARK 500 HIS B 764 -119.19 -127.11 REMARK 500 HIS B 770 62.70 -102.68 REMARK 500 ASN C 26 99.12 -42.78 REMARK 500 GLU C 37 110.75 -24.46 REMARK 500 ASP C 38 45.09 70.40 REMARK 500 ASP C 38 45.20 70.40 REMARK 500 ASP C 119 -169.93 -160.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLN C 25 ASN C 26 143.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 17 OG REMARK 620 2 THR A 35 OG1 84.5 REMARK 620 3 GNP A 201 O1G 173.7 89.8 REMARK 620 4 GNP A 201 O1B 92.9 176.6 92.9 REMARK 620 5 HOH A 318 O 86.9 90.6 90.6 91.5 REMARK 620 6 HOH A 352 O 89.0 89.0 93.5 88.7 175.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA C 202 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR C 87 OG1 REMARK 620 2 HOH C 476 O 131.5 REMARK 620 3 HOH C 477 O 66.7 120.1 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GNP A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EC4 B 2001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 2002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 2003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 2004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 2005 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT B 2006 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 2007 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 2008 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMT C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NA C 202 DBREF 6BVI A 1 166 UNP P01112 RASH_HUMAN 1 166 DBREF 6BVI B 566 1046 UNP Q07889 SOS1_HUMAN 566 1046 DBREF 6BVI C 1 166 UNP P01112 RASH_HUMAN 1 166 SEQADV 6BVI GLY A 0 UNP P01112 EXPRESSION TAG SEQADV 6BVI ALA A 64 UNP P01112 TYR 64 ENGINEERED MUTATION SEQADV 6BVI GLY B 565 UNP Q07889 EXPRESSION TAG SEQADV 6BVI GLY C 0 UNP P01112 EXPRESSION TAG SEQRES 1 A 167 GLY MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA GLY SEQRES 2 A 167 GLY VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN SEQRES 3 A 167 ASN HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SEQRES 4 A 167 SER TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR CSO SEQRES 5 A 167 LEU LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU ALA SEQRES 6 A 167 SER ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY SEQRES 7 A 167 PHE LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SER PHE SEQRES 8 A 167 GLU ASP ILE HIS GLN TYR ARG GLU GLN ILE LYS ARG VAL SEQRES 9 A 167 LYS ASP SER ASP ASP VAL PRO MET VAL LEU VAL GLY ASN SEQRES 10 A 167 LYS CYS ASP LEU ALA ALA ARG THR VAL GLU SER ARG GLN SEQRES 11 A 167 ALA GLN ASP LEU ALA ARG SER TYR GLY ILE PRO TYR ILE SEQRES 12 A 167 GLU THR SER ALA LYS THR ARG GLN GLY VAL GLU ASP ALA SEQRES 13 A 167 PHE TYR THR LEU VAL ARG GLU ILE ARG GLN HIS SEQRES 1 B 482 GLY GLN MET ARG LEU PRO SER ALA ASP VAL TYR ARG PHE SEQRES 2 B 482 ALA GLU PRO ASP SER GLU GLU ASN ILE ILE PHE GLU GLU SEQRES 3 B 482 ASN MET GLN PRO LYS ALA GLY ILE PRO ILE ILE LYS ALA SEQRES 4 B 482 GLY THR VAL ILE LYS LEU ILE GLU ARG LEU THR TYR HIS SEQRES 5 B 482 MET TYR ALA ASP PRO ASN PHE VAL ARG THR PHE LEU THR SEQRES 6 B 482 THR TYR ARG SER PHE CYS LYS PRO GLN GLU LEU LEU SER SEQRES 7 B 482 LEU ILE ILE GLU ARG PHE GLU ILE PRO GLU PRO GLU PRO SEQRES 8 B 482 THR GLU ALA ASP ARG ILE ALA ILE GLU ASN GLY ASP GLN SEQRES 9 B 482 PRO LEU SER ALA GLU LEU LYS ARG PHE ARG LYS GLU TYR SEQRES 10 B 482 ILE GLN PRO VAL GLN LEU ARG VAL LEU ASN VAL CYS ARG SEQRES 11 B 482 HIS TRP VAL GLU HIS HIS PHE TYR ASP PHE GLU ARG ASP SEQRES 12 B 482 ALA TYR LEU LEU GLN ARG MET GLU GLU PHE ILE GLY THR SEQRES 13 B 482 VAL ARG GLY LYS ALA MET LYS LYS TRP VAL GLU SER ILE SEQRES 14 B 482 THR LYS ILE ILE GLN ARG LYS LYS ILE ALA ARG ASP ASN SEQRES 15 B 482 GLY PRO GLY HIS ASN ILE THR PHE GLN SER SER PRO PRO SEQRES 16 B 482 THR VAL GLU TRP HIS ILE SER ARG PRO GLY HIS ILE GLU SEQRES 17 B 482 THR PHE ASP LEU LEU THR LEU HIS PRO ILE GLU ILE ALA SEQRES 18 B 482 ARG GLN LEU THR LEU LEU GLU SER ASP LEU TYR ARG ALA SEQRES 19 B 482 VAL GLN PRO SER GLU LEU VAL GLY SER VAL TRP THR LYS SEQRES 20 B 482 GLU ASP LYS GLU ILE ASN SER PRO ASN LEU LEU LYS MET SEQRES 21 B 482 ILE ARG HIS THR THR ASN LEU THR LEU TRP PHE GLU LYS SEQRES 22 B 482 CYS ILE VAL GLU THR GLU ASN LEU GLU GLU ARG VAL ALA SEQRES 23 B 482 VAL VAL SER ARG ILE ILE GLU ILE LEU GLN VAL PHE GLN SEQRES 24 B 482 GLU LEU ASN ASN PHE ASN GLY VAL LEU GLU VAL VAL SER SEQRES 25 B 482 ALA MET ASN SER SER PRO VAL TYR ARG LEU ASP HIS THR SEQRES 26 B 482 PHE GLU GLN ILE PRO SER ARG GLN LYS LYS ILE LEU GLU SEQRES 27 B 482 GLU ALA HIS GLU LEU SER GLU ASP HIS TYR LYS LYS TYR SEQRES 28 B 482 LEU ALA LYS LEU ARG SER ILE ASN PRO PRO CYS VAL PRO SEQRES 29 B 482 PHE PHE GLY ILE TYR LEU THR ASN ILE LEU LYS THR GLU SEQRES 30 B 482 GLU GLY ASN PRO GLU VAL LEU LYS ARG HIS GLY LYS GLU SEQRES 31 B 482 LEU ILE ASN PHE SER LYS ARG ARG LYS VAL ALA GLU ILE SEQRES 32 B 482 THR GLY GLU ILE GLN GLN TYR GLN ASN GLN PRO TYR CYS SEQRES 33 B 482 LEU ARG VAL GLU SER ASP ILE LYS ARG PHE PHE GLU ASN SEQRES 34 B 482 LEU ASN PRO MET GLY ASN SER MET GLU LYS GLU PHE THR SEQRES 35 B 482 ASP TYR LEU PHE ASN LYS SER LEU GLU ILE GLU PRO ARG SEQRES 36 B 482 ASN PRO LYS PRO LEU PRO ARG PHE PRO LYS LYS TYR SER SEQRES 37 B 482 TYR PRO LEU LYS SER PRO GLY VAL ARG PRO SER ASN PRO SEQRES 38 B 482 ARG SEQRES 1 C 167 GLY MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA GLY SEQRES 2 C 167 GLY VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN SEQRES 3 C 167 ASN HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SEQRES 4 C 167 SER TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR CYS SEQRES 5 C 167 LEU LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU TYR SEQRES 6 C 167 SER ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY SEQRES 7 C 167 PHE LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SER PHE SEQRES 8 C 167 GLU ASP ILE HIS GLN TYR ARG GLU GLN ILE LYS ARG VAL SEQRES 9 C 167 LYS ASP SER ASP ASP VAL PRO MET VAL LEU VAL GLY ASN SEQRES 10 C 167 LYS CYS ASP LEU ALA ALA ARG THR VAL GLU SER ARG GLN SEQRES 11 C 167 ALA GLN ASP LEU ALA ARG SER TYR GLY ILE PRO TYR ILE SEQRES 12 C 167 GLU THR SER ALA LYS THR ARG GLN GLY VAL GLU ASP ALA SEQRES 13 C 167 PHE TYR THR LEU VAL ARG GLU ILE ARG GLN HIS MODRES 6BVI CSO A 51 CYS MODIFIED RESIDUE HET CSO A 51 7 HET GNP A 201 32 HET MG A 202 1 HET EC4 B2001 33 HET FMT B2002 3 HET FMT B2003 3 HET FMT B2004 3 HET FMT B2005 3 HET FMT B2006 3 HET GOL B2007 6 HET GOL B2008 6 HET FMT C 201 3 HET NA C 202 1 HETNAM CSO S-HYDROXYCYSTEINE HETNAM GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER HETNAM MG MAGNESIUM ION HETNAM EC4 6-CHLORO-N-{1-[(5-CHLORO-1H-INDOL-3-YL) HETNAM 2 EC4 METHYL]PIPERIDIN-4-YL}-L-TRYPTOPHANAMIDE HETNAM FMT FORMIC ACID HETNAM GOL GLYCEROL HETNAM NA SODIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 CSO C3 H7 N O3 S FORMUL 4 GNP C10 H17 N6 O13 P3 FORMUL 5 MG MG 2+ FORMUL 6 EC4 C25 H27 CL2 N5 O FORMUL 7 FMT 6(C H2 O2) FORMUL 12 GOL 2(C3 H8 O3) FORMUL 15 NA NA 1+ FORMUL 16 HOH *1161(H2 O) HELIX 1 AA1 GLY A 15 ASN A 26 1 12 HELIX 2 AA2 GLN A 61 SER A 65 5 5 HELIX 3 AA3 ARG A 68 GLY A 75 1 8 HELIX 4 AA4 ASN A 86 ASP A 92 1 7 HELIX 5 AA5 ASP A 92 ASP A 105 1 14 HELIX 6 AA6 GLU A 126 GLY A 138 1 13 HELIX 7 AA7 GLY A 151 GLN A 165 1 15 HELIX 8 AA8 TYR B 575 GLU B 579 5 5 HELIX 9 AA9 THR B 605 THR B 614 1 10 HELIX 10 AB1 ASP B 620 TYR B 631 1 12 HELIX 11 AB2 ARG B 632 PHE B 634 5 3 HELIX 12 AB3 LYS B 636 GLU B 649 1 14 HELIX 13 AB4 THR B 656 ASN B 665 1 10 HELIX 14 AB5 SER B 671 TYR B 681 1 11 HELIX 15 AB6 TYR B 681 HIS B 700 1 20 HELIX 16 AB7 PHE B 701 ASP B 707 1 7 HELIX 17 AB8 ASP B 707 THR B 720 1 14 HELIX 18 AB9 MET B 726 ALA B 743 1 18 HELIX 19 AC1 HIS B 770 PHE B 774 5 5 HELIX 20 AC2 HIS B 780 ALA B 798 1 19 HELIX 21 AC3 GLN B 800 LYS B 811 5 12 HELIX 22 AC4 ASP B 813 SER B 818 1 6 HELIX 23 AC5 SER B 818 GLU B 841 1 24 HELIX 24 AC6 ASN B 844 LEU B 865 1 22 HELIX 25 AC7 ASN B 867 ASN B 879 1 13 HELIX 26 AC8 SER B 880 ARG B 885 1 6 HELIX 27 AC9 LEU B 886 GLU B 891 1 6 HELIX 28 AD1 PRO B 894 LEU B 907 1 14 HELIX 29 AD2 SER B 908 ARG B 920 1 13 HELIX 30 AD3 PHE B 930 GLY B 943 1 14 HELIX 31 AD4 PHE B 958 GLN B 975 1 18 HELIX 32 AD5 GLU B 984 ASN B 993 1 10 HELIX 33 AD6 MET B 1001 GLU B 1017 1 17 HELIX 34 AD7 SER C 17 GLN C 25 1 9 HELIX 35 AD8 TYR C 64 ALA C 66 5 3 HELIX 36 AD9 MET C 67 THR C 74 1 8 HELIX 37 AE1 ASN C 86 ASP C 92 1 7 HELIX 38 AE2 ASP C 92 ASP C 105 1 14 HELIX 39 AE3 GLU C 126 GLY C 138 1 13 HELIX 40 AE4 GLY C 151 GLN C 165 1 15 SHEET 1 AA1 6 GLU A 37 ILE A 46 0 SHEET 2 AA1 6 GLU A 49 THR A 58 -1 O LEU A 53 N LYS A 42 SHEET 3 AA1 6 THR A 2 GLY A 10 1 N TYR A 4 O ASP A 54 SHEET 4 AA1 6 GLY A 77 ALA A 83 1 O VAL A 81 N VAL A 9 SHEET 5 AA1 6 MET A 111 ASN A 116 1 O ASN A 116 N PHE A 82 SHEET 6 AA1 6 TYR A 141 GLU A 143 1 O ILE A 142 N LEU A 113 SHEET 1 AA2 4 ILE B 586 PHE B 588 0 SHEET 2 AA2 4 ILE B 601 GLY B 604 -1 O ALA B 603 N ILE B 587 SHEET 3 AA2 4 LYS B 953 ASN B 957 -1 O ILE B 956 N GLY B 604 SHEET 4 AA2 4 VAL B 947 ARG B 950 -1 N LEU B 948 O LEU B 955 SHEET 1 AA3 6 ARG C 41 ILE C 46 0 SHEET 2 AA3 6 GLU C 49 ASP C 57 -1 O LEU C 53 N LYS C 42 SHEET 3 AA3 6 THR C 2 GLY C 10 1 N LEU C 6 O LEU C 56 SHEET 4 AA3 6 GLY C 77 ALA C 83 1 O VAL C 81 N VAL C 9 SHEET 5 AA3 6 MET C 111 LYS C 117 1 O ASN C 116 N PHE C 82 SHEET 6 AA3 6 TYR C 141 SER C 145 1 O THR C 144 N LYS C 117 LINK C THR A 50 N CSO A 51 1555 1555 1.32 LINK C CSO A 51 N LEU A 52 1555 1555 1.32 LINK OG SER A 17 MG MG A 202 1555 1555 2.08 LINK OG1 THR A 35 MG MG A 202 1555 1555 2.08 LINK O1G GNP A 201 MG MG A 202 1555 1555 2.02 LINK O1B GNP A 201 MG MG A 202 1555 1555 2.08 LINK MG MG A 202 O HOH A 318 1555 1555 2.12 LINK MG MG A 202 O HOH A 352 1555 1555 2.10 LINK OG1BTHR C 87 NA NA C 202 1555 1555 3.17 LINK NA NA C 202 O HOH C 476 1555 1555 2.30 LINK NA NA C 202 O HOH C 477 1555 1555 2.74 CISPEP 1 PRO B 924 PRO B 925 0 11.30 CISPEP 2 ASN B 1020 PRO B 1021 0 6.87 SITE 1 AC1 31 GLY A 12 GLY A 13 VAL A 14 GLY A 15 SITE 2 AC1 31 LYS A 16 SER A 17 ALA A 18 PHE A 28 SITE 3 AC1 31 VAL A 29 ASP A 30 GLU A 31 TYR A 32 SITE 4 AC1 31 PRO A 34 THR A 35 GLY A 60 GLN A 61 SITE 5 AC1 31 ASN A 116 LYS A 117 ASP A 119 LEU A 120 SITE 6 AC1 31 SER A 145 ALA A 146 LYS A 147 MG A 202 SITE 7 AC1 31 HOH A 318 HOH A 347 HOH A 352 HOH A 371 SITE 8 AC1 31 HOH A 386 HOH A 398 HOH A 427 SITE 1 AC2 5 SER A 17 THR A 35 GNP A 201 HOH A 318 SITE 2 AC2 5 HOH A 352 SITE 1 AC3 10 MET B 878 ASN B 879 TYR B 884 PHE B 890 SITE 2 AC3 10 LYS B 898 LEU B 901 GLU B 902 HOH B2227 SITE 3 AC3 10 HOH B2502 HOH B2560 SITE 1 AC4 7 GLN B 566 MET B 567 HIS B 616 MET B 617 SITE 2 AC4 7 HOH B2169 HOH B2322 HOH B2336 SITE 1 AC5 3 ARG A 128 ARG B 767 PRO B 768 SITE 1 AC6 7 GLU A 37 MET A 67 GLN A 70 ALA B 619 SITE 2 AC6 7 ARG B 688 HOH B2148 HOH B2260 SITE 1 AC7 6 GLU B 611 TYR B 615 HIS B 616 ARG B 647 SITE 2 AC7 6 TYR B 681 HOH B2273 SITE 1 AC8 1 TYR B1031 SITE 1 AC9 5 SER B 793 ASP B 794 PRO B 978 TYR B 979 SITE 2 AC9 5 HOH B2275 SITE 1 AD1 5 ARG B 786 GLU B 864 VAL B1040 HOH B2113 SITE 2 AD1 5 HOH B2215 SITE 1 AD2 6 LEU B 938 LYS C 16 SER C 17 ALA C 59 SITE 2 AD2 6 HOH C 303 HOH C 400 SITE 1 AD3 6 ASN C 85 ASN C 86 THR C 87 THR C 124 SITE 2 AD3 6 HOH C 476 HOH C 477 CRYST1 184.323 184.323 179.091 90.00 90.00 90.00 I 4 2 2 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005425 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005425 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005584 0.00000