HEADER IMMUNE SYSTEM 18-DEC-17 6BXE TITLE CRYSTAL STRUCTURE OF VARIABLE LYMPHOCYTE RECEPTOR 9 (VLR9) COMPND MOL_ID: 1; COMPND 2 MOLECULE: VARIABLE LYMPHOCYTE RECEPTOR DIVERSITY REGION; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PETROMYZON MARINUS; SOURCE 3 ORGANISM_COMMON: SEA LAMPREY; SOURCE 4 ORGANISM_TAXID: 7757; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108 KEYWDS VLR, LEUCINE-RICH REPEAT, LAMPREY ANTIBODY, IMMUNE RECEPTOR, IMMUNE KEYWDS 2 SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR R.J.GUNN,I.A.WILSON,M.D.COOPER,B.R.HERRIN REVDAT 6 04-OCT-23 6BXE 1 REMARK REVDAT 5 30-MAR-22 6BXE 1 REMARK REVDAT 4 23-MAR-22 6BXE 1 REMARK REVDAT 3 18-DEC-19 6BXE 1 REMARK REVDAT 2 20-FEB-19 6BXE 1 REMARK REVDAT 1 09-MAY-18 6BXE 0 JRNL AUTH R.J.GUNN,B.R.HERRIN,S.ACHARYA,M.D.COOPER,I.A.WILSON JRNL TITL VLR RECOGNITION OF TLR5 EXPANDS THE MOLECULAR JRNL TITL 2 CHARACTERIZATION OF PROTEIN ANTIGEN BINDING BY NON-IG-BASED JRNL TITL 3 ANTIBODIES. JRNL REF J. MOL. BIOL. V. 430 1350 2018 JRNL REFN ESSN 1089-8638 JRNL PMID 29596914 JRNL DOI 10.1016/J.JMB.2018.03.016 REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (1.12_2829) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.29 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.400 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 38071 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.154 REMARK 3 R VALUE (WORKING SET) : 0.153 REMARK 3 FREE R VALUE : 0.174 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.870 REMARK 3 FREE R VALUE TEST SET COUNT : 1854 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.2990 - 3.8816 1.00 2873 133 0.1414 0.1593 REMARK 3 2 3.8816 - 3.0815 1.00 2832 150 0.1427 0.1515 REMARK 3 3 3.0815 - 2.6921 1.00 2803 141 0.1621 0.1898 REMARK 3 4 2.6921 - 2.4461 1.00 2779 179 0.1549 0.1676 REMARK 3 5 2.4461 - 2.2708 1.00 2840 128 0.1450 0.1792 REMARK 3 6 2.2708 - 2.1369 1.00 2856 106 0.1469 0.1819 REMARK 3 7 2.1369 - 2.0299 1.00 2801 146 0.1469 0.1556 REMARK 3 8 2.0299 - 1.9415 1.00 2767 182 0.1466 0.1726 REMARK 3 9 1.9415 - 1.8668 1.00 2799 154 0.1623 0.1806 REMARK 3 10 1.8668 - 1.8024 1.00 2765 171 0.1758 0.2064 REMARK 3 11 1.8024 - 1.7460 1.00 2824 132 0.1920 0.2598 REMARK 3 12 1.7460 - 1.6961 0.98 2766 120 0.2045 0.2665 REMARK 3 13 1.6961 - 1.6515 0.89 2512 112 0.2286 0.2330 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.180 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 2493 REMARK 3 ANGLE : 0.915 3418 REMARK 3 CHIRALITY : 0.061 403 REMARK 3 PLANARITY : 0.006 439 REMARK 3 DIHEDRAL : 11.785 1501 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 21 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.7750 -28.2778 9.0120 REMARK 3 T TENSOR REMARK 3 T11: 0.3056 T22: 0.4735 REMARK 3 T33: 0.2198 T12: 0.0417 REMARK 3 T13: -0.0030 T23: -0.0885 REMARK 3 L TENSOR REMARK 3 L11: 4.6342 L22: 6.5580 REMARK 3 L33: 4.9041 L12: -1.2764 REMARK 3 L13: 0.3072 L23: -0.0129 REMARK 3 S TENSOR REMARK 3 S11: -0.1885 S12: -0.9889 S13: 0.4151 REMARK 3 S21: 0.6086 S22: 0.2526 S23: 0.1969 REMARK 3 S31: -0.5321 S32: -0.3621 S33: -0.1315 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 35 THROUGH 65 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.7467 -22.3553 2.1668 REMARK 3 T TENSOR REMARK 3 T11: 0.2194 T22: 0.2891 REMARK 3 T33: 0.2291 T12: 0.0287 REMARK 3 T13: 0.0040 T23: -0.0875 REMARK 3 L TENSOR REMARK 3 L11: 2.5083 L22: 2.9651 REMARK 3 L33: 1.9536 L12: 0.8470 REMARK 3 L13: 0.4365 L23: -0.6657 REMARK 3 S TENSOR REMARK 3 S11: 0.0009 S12: -0.4403 S13: 0.4514 REMARK 3 S21: 0.3428 S22: 0.0107 S23: 0.1406 REMARK 3 S31: -0.2619 S32: -0.2104 S33: -0.0222 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 66 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.3422 -25.2726 2.8319 REMARK 3 T TENSOR REMARK 3 T11: 0.1853 T22: 0.2013 REMARK 3 T33: 0.2264 T12: 0.0082 REMARK 3 T13: -0.0385 T23: -0.0777 REMARK 3 L TENSOR REMARK 3 L11: 1.8838 L22: 2.2815 REMARK 3 L33: 2.5258 L12: 0.0662 REMARK 3 L13: 0.1853 L23: -2.0044 REMARK 3 S TENSOR REMARK 3 S11: -0.0801 S12: -0.3778 S13: 0.3762 REMARK 3 S21: 0.6455 S22: 0.1314 S23: -0.2621 REMARK 3 S31: -0.2516 S32: 0.1030 S33: -0.1354 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 76 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.3147 -23.8983 -10.2992 REMARK 3 T TENSOR REMARK 3 T11: 0.1560 T22: 0.1529 REMARK 3 T33: 0.2001 T12: 0.0027 REMARK 3 T13: -0.0136 T23: -0.0240 REMARK 3 L TENSOR REMARK 3 L11: 2.4287 L22: 0.6112 REMARK 3 L33: 1.8478 L12: -0.0008 REMARK 3 L13: 0.2209 L23: -0.4212 REMARK 3 S TENSOR REMARK 3 S11: 0.0396 S12: 0.0001 S13: 0.1830 REMARK 3 S21: -0.0120 S22: -0.0012 S23: -0.0320 REMARK 3 S31: -0.0723 S32: -0.0012 S33: -0.0745 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 138 THROUGH 153 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.8328 -25.6012 -20.0757 REMARK 3 T TENSOR REMARK 3 T11: 0.2116 T22: 0.2917 REMARK 3 T33: 0.2133 T12: 0.0457 REMARK 3 T13: 0.0325 T23: 0.0006 REMARK 3 L TENSOR REMARK 3 L11: 5.8235 L22: 5.3863 REMARK 3 L33: 5.6892 L12: 0.5800 REMARK 3 L13: 0.2375 L23: -3.0428 REMARK 3 S TENSOR REMARK 3 S11: 0.0174 S12: 0.3615 S13: 0.1633 REMARK 3 S21: -0.4048 S22: -0.2240 S23: -0.5501 REMARK 3 S31: 0.3511 S32: 0.4566 S33: 0.1396 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 154 THROUGH 166 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.2756 -23.2787 -23.9527 REMARK 3 T TENSOR REMARK 3 T11: 0.2851 T22: 0.2521 REMARK 3 T33: 0.2313 T12: 0.0252 REMARK 3 T13: -0.0145 T23: -0.0004 REMARK 3 L TENSOR REMARK 3 L11: 3.3674 L22: 0.7041 REMARK 3 L33: 2.4375 L12: -1.3893 REMARK 3 L13: 2.0630 L23: -0.5685 REMARK 3 S TENSOR REMARK 3 S11: 0.0046 S12: 0.3483 S13: 0.1964 REMARK 3 S21: -0.2126 S22: -0.1094 S23: 0.1736 REMARK 3 S31: 0.0890 S32: 0.0846 S33: 0.2114 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 167 THROUGH 181 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.8562 -15.2918 -26.5287 REMARK 3 T TENSOR REMARK 3 T11: 0.2804 T22: 0.3832 REMARK 3 T33: 0.5327 T12: 0.0682 REMARK 3 T13: 0.0263 T23: 0.1447 REMARK 3 L TENSOR REMARK 3 L11: 5.4730 L22: 8.1438 REMARK 3 L33: 5.3226 L12: 3.0821 REMARK 3 L13: 0.6080 L23: -0.5059 REMARK 3 S TENSOR REMARK 3 S11: 0.0243 S12: 0.5748 S13: 0.9981 REMARK 3 S21: -0.7501 S22: -0.4435 S23: -0.7707 REMARK 3 S31: -0.4417 S32: 0.5680 S33: 0.5138 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 17 THROUGH 26 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.1403 -49.8606 2.7558 REMARK 3 T TENSOR REMARK 3 T11: 0.3885 T22: 0.3515 REMARK 3 T33: 0.3958 T12: 0.0478 REMARK 3 T13: -0.0178 T23: 0.1039 REMARK 3 L TENSOR REMARK 3 L11: 1.6952 L22: 2.3598 REMARK 3 L33: 3.5853 L12: 1.9224 REMARK 3 L13: 2.4178 L23: 2.8639 REMARK 3 S TENSOR REMARK 3 S11: 0.3361 S12: 0.0413 S13: 0.0421 REMARK 3 S21: -0.0833 S22: -0.2937 S23: -0.4924 REMARK 3 S31: 0.2663 S32: 0.6800 S33: -0.0544 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 27 THROUGH 55 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.6513 -47.2662 -2.0364 REMARK 3 T TENSOR REMARK 3 T11: 0.2414 T22: 0.2732 REMARK 3 T33: 0.2640 T12: 0.0504 REMARK 3 T13: 0.0102 T23: 0.0775 REMARK 3 L TENSOR REMARK 3 L11: 2.2796 L22: 2.7447 REMARK 3 L33: 3.2326 L12: 0.2773 REMARK 3 L13: 1.2459 L23: 0.5787 REMARK 3 S TENSOR REMARK 3 S11: 0.1403 S12: 0.0813 S13: 0.0021 REMARK 3 S21: -0.0983 S22: -0.1927 S23: -0.4586 REMARK 3 S31: 0.2346 S32: 0.3561 S33: 0.0347 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 56 THROUGH 94 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.2964 -48.4560 -7.4059 REMARK 3 T TENSOR REMARK 3 T11: 0.2754 T22: 0.2085 REMARK 3 T33: 0.2159 T12: 0.0191 REMARK 3 T13: 0.0144 T23: 0.0360 REMARK 3 L TENSOR REMARK 3 L11: 2.8145 L22: 2.8942 REMARK 3 L33: 3.1573 L12: 0.3333 REMARK 3 L13: -0.3041 L23: -0.2170 REMARK 3 S TENSOR REMARK 3 S11: -0.0708 S12: 0.0752 S13: -0.1652 REMARK 3 S21: -0.1194 S22: -0.0851 S23: -0.0588 REMARK 3 S31: 0.4624 S32: 0.0252 S33: 0.1269 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 95 THROUGH 127 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.4726 -41.7513 -7.7925 REMARK 3 T TENSOR REMARK 3 T11: 0.1788 T22: 0.1920 REMARK 3 T33: 0.2084 T12: 0.0077 REMARK 3 T13: -0.0044 T23: 0.0329 REMARK 3 L TENSOR REMARK 3 L11: 2.6267 L22: 2.9332 REMARK 3 L33: 2.7842 L12: 0.8697 REMARK 3 L13: -0.3363 L23: -0.7358 REMARK 3 S TENSOR REMARK 3 S11: -0.0262 S12: -0.1150 S13: 0.0749 REMARK 3 S21: -0.0622 S22: -0.0352 S23: 0.2436 REMARK 3 S31: 0.1551 S32: 0.0277 S33: 0.0714 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 128 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.8832 -42.8882 -21.3232 REMARK 3 T TENSOR REMARK 3 T11: 0.2970 T22: 0.2212 REMARK 3 T33: 0.2717 T12: -0.0136 REMARK 3 T13: -0.0342 T23: 0.0159 REMARK 3 L TENSOR REMARK 3 L11: 2.9551 L22: 2.8781 REMARK 3 L33: 5.1247 L12: -2.5357 REMARK 3 L13: -0.5185 L23: -0.1467 REMARK 3 S TENSOR REMARK 3 S11: 0.0590 S12: 0.2200 S13: -0.1857 REMARK 3 S21: -0.4431 S22: -0.0697 S23: 0.4579 REMARK 3 S31: 0.2531 S32: -0.0517 S33: 0.0162 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 138 THROUGH 153 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.6299 -38.8695 -12.7385 REMARK 3 T TENSOR REMARK 3 T11: 0.1895 T22: 0.3035 REMARK 3 T33: 0.2507 T12: -0.0150 REMARK 3 T13: -0.0184 T23: 0.0493 REMARK 3 L TENSOR REMARK 3 L11: 5.4705 L22: 5.9366 REMARK 3 L33: 5.0337 L12: 2.5309 REMARK 3 L13: 2.1231 L23: 0.7122 REMARK 3 S TENSOR REMARK 3 S11: -0.0487 S12: -0.1178 S13: -0.1248 REMARK 3 S21: -0.1418 S22: 0.0653 S23: 0.5002 REMARK 3 S31: 0.1973 S32: -0.7403 S33: -0.0529 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 154 THROUGH 166 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.0142 -35.0905 -22.1003 REMARK 3 T TENSOR REMARK 3 T11: 0.2507 T22: 0.2167 REMARK 3 T33: 0.1937 T12: 0.0183 REMARK 3 T13: -0.0178 T23: 0.0429 REMARK 3 L TENSOR REMARK 3 L11: 5.2447 L22: 8.0788 REMARK 3 L33: 0.7535 L12: 0.8577 REMARK 3 L13: -0.4630 L23: 1.3078 REMARK 3 S TENSOR REMARK 3 S11: 0.0362 S12: 0.3501 S13: -0.0223 REMARK 3 S21: -0.6698 S22: -0.1120 S23: 0.0707 REMARK 3 S31: 0.0282 S32: -0.2043 S33: 0.0012 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 167 THROUGH 181 ) REMARK 3 ORIGIN FOR THE GROUP (A): -26.7513 -43.1873 -22.9310 REMARK 3 T TENSOR REMARK 3 T11: 0.4696 T22: 0.4148 REMARK 3 T33: 0.5310 T12: -0.1553 REMARK 3 T13: -0.1492 T23: -0.0292 REMARK 3 L TENSOR REMARK 3 L11: 4.9130 L22: 5.6462 REMARK 3 L33: 3.1413 L12: 1.9739 REMARK 3 L13: 0.8616 L23: 1.1368 REMARK 3 S TENSOR REMARK 3 S11: -0.0174 S12: 0.5254 S13: -0.6789 REMARK 3 S21: -0.4329 S22: 0.1561 S23: 1.0496 REMARK 3 S31: 0.7980 S32: -0.7314 S33: -0.1003 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6BXE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1000231653. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-MAR-16 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38111 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 200 DATA REDUNDANCY : 18.30 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 38.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.6 REMARK 200 DATA REDUNDANCY IN SHELL : 10.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3TWI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.77 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0 M (NH4)2SO4, 0.1 M CITRATE PH 5.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.10233 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 66.20467 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 49.65350 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 82.75583 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 16.55117 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 4 REMARK 465 GLY A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 HIS A 8 REMARK 465 HIS A 9 REMARK 465 HIS A 10 REMARK 465 HIS A 11 REMARK 465 GLY A 12 REMARK 465 SER A 13 REMARK 465 GLU A 14 REMARK 465 ASN A 15 REMARK 465 LEU A 16 REMARK 465 TYR A 17 REMARK 465 PHE A 18 REMARK 465 GLN A 19 REMARK 465 GLY A 20 REMARK 465 GLY B 4 REMARK 465 GLY B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 HIS B 8 REMARK 465 HIS B 9 REMARK 465 HIS B 10 REMARK 465 HIS B 11 REMARK 465 GLY B 12 REMARK 465 SER B 13 REMARK 465 GLU B 14 REMARK 465 ASN B 15 REMARK 465 LEU B 16 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 121 NZ REMARK 470 GLU A 172 CG CD OE1 OE2 REMARK 470 TYR B 17 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG B 71 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 110 CE NZ REMARK 470 ARG B 114 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 121 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 82 64.04 61.54 REMARK 500 LYS A 179 32.28 -92.15 REMARK 500 ILE B 82 63.74 61.66 REMARK 500 LEU B 96 55.17 -97.18 REMARK 500 LYS B 179 33.92 -93.04 REMARK 500 REMARK 500 REMARK: NULL DBREF 6BXE A 4 90 PDB 6BXE 6BXE 4 90 DBREF 6BXE A 91 181 UNP A5HBR7 A5HBR7_PETMA 71 161 DBREF 6BXE B 4 90 PDB 6BXE 6BXE 4 90 DBREF 6BXE B 91 181 UNP A5HBR7 A5HBR7_PETMA 71 161 SEQRES 1 A 178 GLY GLY HIS HIS HIS HIS HIS HIS GLY SER GLU ASN LEU SEQRES 2 A 178 TYR PHE GLN GLY ALA CYS PRO SER GLN CYS SER CYS SER SEQRES 3 A 178 GLY THR THR VAL ASP CYS SER GLY LYS SER LEU ALA SER SEQRES 4 A 178 VAL PRO GLY GLY ILE PRO THR THR THR GLN VAL LEU TYR SEQRES 5 A 178 LEU TYR ASP ASN GLN ILE THR LYS LEU GLU PRO GLY VAL SEQRES 6 A 178 PHE ASP ARG LEU VAL ASN LEU GLN GLN LEU TRP LEU GLU SEQRES 7 A 178 ILE ASN GLN LEU THR SER LEU PRO ALA GLY VAL PHE ASP SEQRES 8 A 178 ASN LEU THR GLN LEU SER ILE LEU ASN MET HIS THR ASN SEQRES 9 A 178 GLN LEU LYS SER ILE PRO ARG GLY ALA PHE ASP ASN LEU SEQRES 10 A 178 LYS SER LEU THR HIS ILE TRP LEU LEU ASN ASN PRO TRP SEQRES 11 A 178 ASP CYS ALA CYS SER ASP ILE LEU TYR LEU SER GLY TRP SEQRES 12 A 178 LEU GLY GLN HIS ALA GLY LYS GLU GLN GLY GLN ALA VAL SEQRES 13 A 178 CYS SER GLY THR ASN THR PRO VAL ARG ALA VAL THR GLU SEQRES 14 A 178 ALA SER THR SER PRO SER LYS CYS PRO SEQRES 1 B 178 GLY GLY HIS HIS HIS HIS HIS HIS GLY SER GLU ASN LEU SEQRES 2 B 178 TYR PHE GLN GLY ALA CYS PRO SER GLN CYS SER CYS SER SEQRES 3 B 178 GLY THR THR VAL ASP CYS SER GLY LYS SER LEU ALA SER SEQRES 4 B 178 VAL PRO GLY GLY ILE PRO THR THR THR GLN VAL LEU TYR SEQRES 5 B 178 LEU TYR ASP ASN GLN ILE THR LYS LEU GLU PRO GLY VAL SEQRES 6 B 178 PHE ASP ARG LEU VAL ASN LEU GLN GLN LEU TRP LEU GLU SEQRES 7 B 178 ILE ASN GLN LEU THR SER LEU PRO ALA GLY VAL PHE ASP SEQRES 8 B 178 ASN LEU THR GLN LEU SER ILE LEU ASN MET HIS THR ASN SEQRES 9 B 178 GLN LEU LYS SER ILE PRO ARG GLY ALA PHE ASP ASN LEU SEQRES 10 B 178 LYS SER LEU THR HIS ILE TRP LEU LEU ASN ASN PRO TRP SEQRES 11 B 178 ASP CYS ALA CYS SER ASP ILE LEU TYR LEU SER GLY TRP SEQRES 12 B 178 LEU GLY GLN HIS ALA GLY LYS GLU GLN GLY GLN ALA VAL SEQRES 13 B 178 CYS SER GLY THR ASN THR PRO VAL ARG ALA VAL THR GLU SEQRES 14 B 178 ALA SER THR SER PRO SER LYS CYS PRO FORMUL 3 HOH *294(H2 O) HELIX 1 AA1 CYS A 137 ASP A 139 5 3 HELIX 2 AA2 ILE A 140 HIS A 150 1 11 HELIX 3 AA3 PRO A 166 VAL A 170 5 5 HELIX 4 AA4 THR A 171 THR A 175 5 5 HELIX 5 AA5 SER A 176 CYS A 180 5 5 HELIX 6 AA6 CYS B 137 ASP B 139 5 3 HELIX 7 AA7 ILE B 140 HIS B 150 1 11 HELIX 8 AA8 ALA B 151 GLU B 154 5 4 HELIX 9 AA9 PRO B 166 VAL B 170 5 5 HELIX 10 AB1 THR B 171 THR B 175 5 5 HELIX 11 AB2 SER B 176 CYS B 180 5 5 SHEET 1 AA1 7 SER A 27 SER A 29 0 SHEET 2 AA1 7 THR A 32 ASP A 34 -1 O ASP A 34 N SER A 27 SHEET 3 AA1 7 VAL A 53 TYR A 55 1 O VAL A 53 N VAL A 33 SHEET 4 AA1 7 GLN A 77 TRP A 79 1 O TRP A 79 N LEU A 54 SHEET 5 AA1 7 ILE A 101 ASN A 103 1 O ASN A 103 N LEU A 78 SHEET 6 AA1 7 HIS A 125 TRP A 127 1 O HIS A 125 N LEU A 102 SHEET 7 AA1 7 GLU A 154 GLN A 155 1 O GLN A 155 N ILE A 126 SHEET 1 AA2 6 SER B 27 SER B 29 0 SHEET 2 AA2 6 THR B 32 ASP B 34 -1 O ASP B 34 N SER B 27 SHEET 3 AA2 6 VAL B 53 TYR B 55 1 O VAL B 53 N VAL B 33 SHEET 4 AA2 6 GLN B 77 TRP B 79 1 O TRP B 79 N LEU B 54 SHEET 5 AA2 6 ILE B 101 ASN B 103 1 O ILE B 101 N LEU B 78 SHEET 6 AA2 6 HIS B 125 TRP B 127 1 O HIS B 125 N LEU B 102 SSBOND 1 CYS A 22 CYS A 28 1555 1555 2.03 SSBOND 2 CYS A 26 CYS A 35 1555 1555 2.02 SSBOND 3 CYS A 135 CYS A 160 1555 1555 2.04 SSBOND 4 CYS A 137 CYS A 180 1555 1555 2.04 SSBOND 5 CYS B 22 CYS B 28 1555 1555 2.03 SSBOND 6 CYS B 26 CYS B 35 1555 1555 2.02 SSBOND 7 CYS B 135 CYS B 160 1555 1555 2.03 SSBOND 8 CYS B 137 CYS B 180 1555 1555 2.03 CRYST1 75.511 75.511 99.307 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013243 0.007646 0.000000 0.00000 SCALE2 0.000000 0.015292 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010070 0.00000