HEADER CELL ADHESION 18-DEC-17 6BXJ TITLE STRUCTURE OF A SINGLE-CHAIN BETA3 INTEGRIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHIMERA PROTEIN OF INTEGRIN BETA-3 AND INTEGRIN ALPHA-L; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PLATELET MEMBRANE GLYCOPROTEIN IIIA,GPIIIA,CD11 ANTIGEN-LIKE COMPND 5 FAMILY MEMBER A,LEUKOCYTE ADHESION GLYCOPROTEIN LFA-1 ALPHA CHAIN, COMPND 6 LFA-1A,LEUKOCYTE FUNCTION-ASSOCIATED MOLECULE 1 ALPHA CHAIN; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ITGB3, GP3A, ITGAL, CD11A; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606 KEYWDS INTEGRIN, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR A.M.M.THINN,Z.WANG,D.ZHOU,Y.ZHAO,B.R.CURTIS,J.ZHU REVDAT 5 29-JUL-20 6BXJ 1 COMPND REMARK HETNAM LINK REVDAT 5 2 1 SITE REVDAT 4 04-DEC-19 6BXJ 1 REMARK REVDAT 3 20-FEB-19 6BXJ 1 COMPND REVDAT 2 10-OCT-18 6BXJ 1 COMPND JRNL REVDAT 1 03-OCT-18 6BXJ 0 JRNL AUTH A.M.M.THINN,Z.WANG,D.ZHOU,Y.ZHAO,B.R.CURTIS,J.ZHU JRNL TITL AUTONOMOUS CONFORMATIONAL REGULATION OF BETA3INTEGRIN AND JRNL TITL 2 THE CONFORMATION-DEPENDENT PROPERTY OF HPA-1A JRNL TITL 3 ALLOANTIBODIES. JRNL REF PROC. NATL. ACAD. SCI. V. 115 E9105 2018 JRNL REF 2 U.S.A. JRNL REFN ESSN 1091-6490 JRNL PMID 30209215 JRNL DOI 10.1073/PNAS.1806205115 REMARK 2 REMARK 2 RESOLUTION. 2.09 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.12_2829 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.09 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.29 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 50811 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.234 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 2556 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.3042 - 5.4799 0.99 2748 163 0.1637 0.2072 REMARK 3 2 5.4799 - 4.3505 0.99 2717 171 0.1349 0.1730 REMARK 3 3 4.3505 - 3.8009 0.99 2715 164 0.1473 0.1748 REMARK 3 4 3.8009 - 3.4535 0.99 2712 147 0.1589 0.2141 REMARK 3 5 3.4535 - 3.2060 0.99 2707 131 0.1782 0.2557 REMARK 3 6 3.2060 - 3.0170 0.99 2732 138 0.1861 0.2511 REMARK 3 7 3.0170 - 2.8659 0.99 2699 134 0.1896 0.2649 REMARK 3 8 2.8659 - 2.7412 0.98 2702 137 0.1893 0.2629 REMARK 3 9 2.7412 - 2.6357 0.98 2646 152 0.2058 0.2408 REMARK 3 10 2.6357 - 2.5447 0.98 2677 161 0.2097 0.2511 REMARK 3 11 2.5447 - 2.4652 0.98 2716 132 0.2103 0.2657 REMARK 3 12 2.4652 - 2.3947 0.98 2617 148 0.2237 0.2958 REMARK 3 13 2.3947 - 2.3317 0.97 2668 136 0.2412 0.3151 REMARK 3 14 2.3317 - 2.2748 0.98 2679 132 0.2657 0.3129 REMARK 3 15 2.2748 - 2.2231 0.97 2684 122 0.2869 0.3550 REMARK 3 16 2.2231 - 2.1758 0.96 2647 131 0.2939 0.3746 REMARK 3 17 2.1758 - 2.1322 0.96 2613 130 0.3049 0.3698 REMARK 3 18 2.1322 - 2.0920 0.93 2576 127 0.3230 0.3405 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.630 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.23 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 57.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 4958 REMARK 3 ANGLE : 0.551 6710 REMARK 3 CHIRALITY : 0.044 738 REMARK 3 PLANARITY : 0.003 880 REMARK 3 DIHEDRAL : 14.928 3098 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 59 ) REMARK 3 ORIGIN FOR THE GROUP (A): 50.5861 36.2360 85.6662 REMARK 3 T TENSOR REMARK 3 T11: 0.7136 T22: 1.0146 REMARK 3 T33: 1.6186 T12: -0.1668 REMARK 3 T13: -0.2835 T23: -0.4973 REMARK 3 L TENSOR REMARK 3 L11: 1.2039 L22: 0.0069 REMARK 3 L33: 0.9807 L12: -0.0892 REMARK 3 L13: 1.0872 L23: -0.0818 REMARK 3 S TENSOR REMARK 3 S11: -0.0567 S12: 0.1039 S13: 0.4344 REMARK 3 S21: 0.0293 S22: 0.6473 S23: -1.2693 REMARK 3 S31: -0.4927 S32: 1.3832 S33: 0.3262 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 60 THROUGH 86 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.3679 3.3966 68.8311 REMARK 3 T TENSOR REMARK 3 T11: 0.2313 T22: 0.3308 REMARK 3 T33: 0.6910 T12: 0.0156 REMARK 3 T13: 0.0201 T23: -0.0612 REMARK 3 L TENSOR REMARK 3 L11: 4.5062 L22: 3.1301 REMARK 3 L33: 9.3979 L12: -2.6858 REMARK 3 L13: -0.4979 L23: -3.4816 REMARK 3 S TENSOR REMARK 3 S11: -0.0472 S12: 0.3041 S13: -1.1229 REMARK 3 S21: -0.0294 S22: 0.0498 S23: -0.2247 REMARK 3 S31: 0.7258 S32: -0.3888 S33: -0.2152 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 87 THROUGH 125 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.8721 9.2389 71.5587 REMARK 3 T TENSOR REMARK 3 T11: 0.2344 T22: 0.2312 REMARK 3 T33: 0.3858 T12: 0.0372 REMARK 3 T13: -0.0535 T23: 0.0132 REMARK 3 L TENSOR REMARK 3 L11: 5.6400 L22: 2.8082 REMARK 3 L33: 0.4459 L12: 2.8634 REMARK 3 L13: 0.6700 L23: 0.3893 REMARK 3 S TENSOR REMARK 3 S11: -0.1742 S12: -0.0131 S13: 0.0833 REMARK 3 S21: 0.0668 S22: 0.1120 S23: -0.2652 REMARK 3 S31: -0.0283 S32: 0.0599 S33: 0.0171 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 126 THROUGH 271 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.1685 0.2449 69.6828 REMARK 3 T TENSOR REMARK 3 T11: 0.1707 T22: 0.1950 REMARK 3 T33: 0.2813 T12: -0.0157 REMARK 3 T13: 0.0031 T23: 0.0121 REMARK 3 L TENSOR REMARK 3 L11: 3.6062 L22: 3.4912 REMARK 3 L33: 1.2792 L12: -0.2278 REMARK 3 L13: -0.1747 L23: -0.1120 REMARK 3 S TENSOR REMARK 3 S11: -0.0429 S12: -0.0451 S13: -0.0559 REMARK 3 S21: -0.0158 S22: 0.0781 S23: 0.0329 REMARK 3 S31: 0.0329 S32: 0.0046 S33: -0.0330 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 272 THROUGH 348 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.3176 15.0678 68.4262 REMARK 3 T TENSOR REMARK 3 T11: 0.2218 T22: 0.2280 REMARK 3 T33: 0.3396 T12: 0.0650 REMARK 3 T13: 0.0115 T23: 0.0125 REMARK 3 L TENSOR REMARK 3 L11: 5.6323 L22: 4.3667 REMARK 3 L33: 2.5057 L12: 3.6174 REMARK 3 L13: 2.9009 L23: 2.0597 REMARK 3 S TENSOR REMARK 3 S11: -0.0934 S12: -0.0775 S13: 0.0123 REMARK 3 S21: 0.0187 S22: 0.0904 S23: -0.1647 REMARK 3 S31: -0.0334 S32: -0.0314 S33: -0.0601 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 349 THROUGH 377 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.1602 15.5614 83.1232 REMARK 3 T TENSOR REMARK 3 T11: 0.4563 T22: 0.3408 REMARK 3 T33: 0.6892 T12: 0.1387 REMARK 3 T13: -0.1749 T23: -0.0360 REMARK 3 L TENSOR REMARK 3 L11: 7.5203 L22: 2.3548 REMARK 3 L33: 5.2898 L12: 2.3035 REMARK 3 L13: 2.2086 L23: 1.0715 REMARK 3 S TENSOR REMARK 3 S11: -0.3990 S12: -0.7626 S13: 0.3869 REMARK 3 S21: 0.4836 S22: -0.0044 S23: -0.4952 REMARK 3 S31: -0.4835 S32: -0.1113 S33: 0.3158 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 378 THROUGH 413 ) REMARK 3 ORIGIN FOR THE GROUP (A): 53.9673 36.5459 105.6550 REMARK 3 T TENSOR REMARK 3 T11: 1.2056 T22: 1.2392 REMARK 3 T33: 1.6599 T12: 0.0142 REMARK 3 T13: -0.9432 T23: -0.3299 REMARK 3 L TENSOR REMARK 3 L11: 1.6494 L22: 0.1155 REMARK 3 L33: 1.6794 L12: 0.3574 REMARK 3 L13: 1.0902 L23: 0.4286 REMARK 3 S TENSOR REMARK 3 S11: 0.2493 S12: -0.3737 S13: -0.2916 REMARK 3 S21: 0.2166 S22: -0.0236 S23: -0.1771 REMARK 3 S31: 0.2400 S32: 0.0261 S33: 0.7382 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 420 THROUGH 430 ) REMARK 3 ORIGIN FOR THE GROUP (A): 44.1597 57.8043 96.9907 REMARK 3 T TENSOR REMARK 3 T11: 1.3512 T22: 1.0335 REMARK 3 T33: 1.4494 T12: -0.3531 REMARK 3 T13: -0.1704 T23: 0.0655 REMARK 3 L TENSOR REMARK 3 L11: 6.6762 L22: 2.5735 REMARK 3 L33: 5.3442 L12: 3.0388 REMARK 3 L13: 4.2702 L23: 3.7073 REMARK 3 S TENSOR REMARK 3 S11: -0.4425 S12: 0.9109 S13: 3.1476 REMARK 3 S21: 0.4936 S22: -0.0763 S23: -1.5387 REMARK 3 S31: -2.7723 S32: 1.9440 S33: 0.5256 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 431 THROUGH 465 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.5914 46.5485 99.1668 REMARK 3 T TENSOR REMARK 3 T11: 0.7874 T22: 0.5599 REMARK 3 T33: 0.7353 T12: -0.1061 REMARK 3 T13: -0.2209 T23: -0.0172 REMARK 3 L TENSOR REMARK 3 L11: 2.5373 L22: 6.5412 REMARK 3 L33: 7.4727 L12: 3.8392 REMARK 3 L13: 1.8811 L23: 1.1400 REMARK 3 S TENSOR REMARK 3 S11: 0.0505 S12: -0.1099 S13: 0.1867 REMARK 3 S21: 0.6766 S22: 0.0906 S23: -0.8281 REMARK 3 S31: -0.5402 S32: 0.5265 S33: -0.0153 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 466 THROUGH 501 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.1568 36.7792 82.0849 REMARK 3 T TENSOR REMARK 3 T11: 0.5197 T22: 0.4752 REMARK 3 T33: 0.4741 T12: 0.0170 REMARK 3 T13: -0.0641 T23: -0.0805 REMARK 3 L TENSOR REMARK 3 L11: 3.0886 L22: 8.6495 REMARK 3 L33: 2.8617 L12: 0.5520 REMARK 3 L13: 1.1644 L23: 3.3489 REMARK 3 S TENSOR REMARK 3 S11: -0.1438 S12: -0.4436 S13: 0.4110 REMARK 3 S21: 0.3670 S22: -0.4133 S23: 0.2558 REMARK 3 S31: -0.8029 S32: -0.1484 S33: 0.5402 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 502 THROUGH 588 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.6498 28.5848 53.5072 REMARK 3 T TENSOR REMARK 3 T11: 0.2380 T22: 0.2863 REMARK 3 T33: 0.3274 T12: -0.0200 REMARK 3 T13: 0.0590 T23: 0.0099 REMARK 3 L TENSOR REMARK 3 L11: 4.6960 L22: 4.9625 REMARK 3 L33: 4.2347 L12: -0.9113 REMARK 3 L13: 2.9392 L23: 0.1457 REMARK 3 S TENSOR REMARK 3 S11: -0.0576 S12: 0.0757 S13: -0.2204 REMARK 3 S21: -0.0873 S22: 0.0868 S23: -0.1099 REMARK 3 S31: 0.0800 S32: 0.0803 S33: -0.0318 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 589 THROUGH 625 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.3839 28.3121 44.0409 REMARK 3 T TENSOR REMARK 3 T11: 0.4021 T22: 0.2926 REMARK 3 T33: 0.3587 T12: -0.0524 REMARK 3 T13: -0.0578 T23: -0.0445 REMARK 3 L TENSOR REMARK 3 L11: 6.1618 L22: 6.8466 REMARK 3 L33: 7.8335 L12: 1.1347 REMARK 3 L13: 1.6744 L23: 3.3624 REMARK 3 S TENSOR REMARK 3 S11: -0.2136 S12: 0.6142 S13: -0.5774 REMARK 3 S21: -0.6494 S22: -0.0576 S23: 0.3613 REMARK 3 S31: 0.5857 S32: -0.1442 S33: 0.3501 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6BXJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-DEC-17. REMARK 100 THE DEPOSITION ID IS D_1000231752. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-AUG-16 REMARK 200 TEMPERATURE (KELVIN) : 80 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : TRUNCATE REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50880 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.090 REMARK 200 RESOLUTION RANGE LOW (A) : 64.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.09 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.15 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.22 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% PEG 8000, 20% 1,5-PENTANEDIOL, 4 REMARK 280 MM ALKALIS, 66 MM GLY-GLY, 33 MM AMPD, PH 8.5., VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 62.64500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 414 REMARK 465 TYR A 415 REMARK 465 ARG A 416 REMARK 465 PRO A 417 REMARK 465 SER A 418 REMARK 465 GLN A 419 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 245 O HOH A 801 2.05 REMARK 500 OD2 ASP A 609 OG SER A 611 2.15 REMARK 500 O HOH A 1099 O HOH A 1202 2.17 REMARK 500 O HOH A 1339 O HOH A 1357 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 7 31.80 -98.16 REMARK 500 PHE A 56 88.66 -151.90 REMARK 500 ASP A 71 -105.70 -82.66 REMARK 500 GLN A 79 156.67 66.56 REMARK 500 SER A 156 -99.74 -142.47 REMARK 500 LYS A 172 -28.54 68.24 REMARK 500 LEU A 186 -133.43 -131.80 REMARK 500 LEU A 187 -159.15 -89.87 REMARK 500 GLN A 377 48.65 -109.63 REMARK 500 ASN A 386 -139.36 64.39 REMARK 500 LEU A 404 -167.14 -128.68 REMARK 500 SER A 411 -99.40 -115.79 REMARK 500 SER A 474 15.77 57.97 REMARK 500 CYS A 538 76.64 -159.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1394 DISTANCE = 6.92 ANGSTROMS REMARK 525 HOH A1395 DISTANCE = 7.26 ANGSTROMS REMARK 525 HOH A1396 DISTANCE = 8.75 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 701 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 121 OG REMARK 620 2 SER A 123 OG 95.0 REMARK 620 3 ASP A 221 OD2 93.1 97.8 REMARK 620 4 HOH A 835 O 160.7 85.9 105.9 REMARK 620 5 HOH A 897 O 84.9 179.8 82.4 94.2 REMARK 620 6 HOH A 941 O 86.3 86.8 175.4 74.5 93.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 702 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A1244 O REMARK 620 2 HOH A1362 O 89.6 REMARK 620 3 HOH A1391 O 105.2 161.4 REMARK 620 N 1 2 DBREF 6BXJ A 1 109 UNP P05106 ITB3_HUMAN 27 135 DBREF 6BXJ A 110 286 UNP P20701 ITAL_HUMAN 153 329 DBREF 6BXJ A 287 625 UNP P05106 ITB3_HUMAN 376 714 SEQADV 6BXJ TRP A 171 UNP P20701 ARG 214 CONFLICT SEQRES 1 A 625 GLY PRO ASN ILE CYS THR THR ARG GLY VAL SER SER CYS SEQRES 2 A 625 GLN GLN CYS LEU ALA VAL SER PRO MET CYS ALA TRP CYS SEQRES 3 A 625 SER ASP GLU ALA LEU PRO LEU GLY SER PRO ARG CYS ASP SEQRES 4 A 625 LEU LYS GLU ASN LEU LEU LYS ASP ASN CYS ALA PRO GLU SEQRES 5 A 625 SER ILE GLU PHE PRO VAL SER GLU ALA ARG VAL LEU GLU SEQRES 6 A 625 ASP ARG PRO LEU SER ASP LYS GLY SER GLY ASP SER SER SEQRES 7 A 625 GLN VAL THR GLN VAL SER PRO GLN ARG ILE ALA LEU ARG SEQRES 8 A 625 LEU ARG PRO ASP ASP SER LYS ASN PHE SER ILE GLN VAL SEQRES 9 A 625 ARG GLN VAL GLU ASP GLY ASN VAL ASP LEU VAL PHE LEU SEQRES 10 A 625 PHE ASP GLY SER MET SER LEU GLN PRO ASP GLU PHE GLN SEQRES 11 A 625 LYS ILE LEU ASP PHE MET LYS ASP VAL MET LYS LYS LEU SEQRES 12 A 625 SER ASN THR SER TYR GLN PHE ALA ALA VAL GLN PHE SER SEQRES 13 A 625 THR SER TYR LYS THR GLU PHE ASP PHE SER ASP TYR VAL SEQRES 14 A 625 LYS TRP LYS ASP PRO ASP ALA LEU LEU LYS HIS VAL LYS SEQRES 15 A 625 HIS MET LEU LEU LEU THR ASN THR PHE GLY ALA ILE ASN SEQRES 16 A 625 TYR VAL ALA THR GLU VAL PHE ARG GLU GLU LEU GLY ALA SEQRES 17 A 625 ARG PRO ASP ALA THR LYS VAL LEU ILE ILE ILE THR ASP SEQRES 18 A 625 GLY GLU ALA THR ASP SER GLY ASN ILE ASP ALA ALA LYS SEQRES 19 A 625 ASP ILE ILE ARG TYR ILE ILE GLY ILE GLY LYS HIS PHE SEQRES 20 A 625 GLN THR LYS GLU SER GLN GLU THR LEU HIS LYS PHE ALA SEQRES 21 A 625 SER LYS PRO ALA SER GLU PHE VAL LYS ILE LEU ASP THR SEQRES 22 A 625 PHE GLU LYS LEU LYS ASP LEU PHE THR GLU LEU GLN LYS SEQRES 23 A 625 LYS ILE ARG SER LYS VAL GLU LEU GLU VAL ARG ASP LEU SEQRES 24 A 625 PRO GLU GLU LEU SER LEU SER PHE ASN ALA THR CYS LEU SEQRES 25 A 625 ASN ASN GLU VAL ILE PRO GLY LEU LYS SER CYS MET GLY SEQRES 26 A 625 LEU LYS ILE GLY ASP THR VAL SER PHE SER ILE GLU ALA SEQRES 27 A 625 LYS VAL ARG GLY CYS PRO GLN GLU LYS GLU LYS SER PHE SEQRES 28 A 625 THR ILE LYS PRO VAL GLY PHE LYS ASP SER LEU ILE VAL SEQRES 29 A 625 GLN VAL THR PHE ASP CYS ASP CYS ALA CYS GLN ALA GLN SEQRES 30 A 625 ALA GLU PRO ASN SER HIS ARG CYS ASN ASN GLY ASN GLY SEQRES 31 A 625 THR PHE GLU CYS GLY VAL CYS ARG CYS GLY PRO GLY TRP SEQRES 32 A 625 LEU GLY SER GLN CYS GLU CYS SER GLU GLU ASP TYR ARG SEQRES 33 A 625 PRO SER GLN GLN ASP GLU CYS SER PRO ARG GLU GLY GLN SEQRES 34 A 625 PRO VAL CYS SER GLN ARG GLY GLU CYS LEU CYS GLY GLN SEQRES 35 A 625 CYS VAL CYS HIS SER SER ASP PHE GLY LYS ILE THR GLY SEQRES 36 A 625 LYS TYR CYS GLU CYS ASP ASP PHE SER CYS VAL ARG TYR SEQRES 37 A 625 LYS GLY GLU MET CYS SER GLY HIS GLY GLN CYS SER CYS SEQRES 38 A 625 GLY ASP CYS LEU CYS ASP SER ASP TRP THR GLY TYR TYR SEQRES 39 A 625 CYS ASN CYS THR THR ARG THR ASP THR CYS MET SER SER SEQRES 40 A 625 ASN GLY LEU LEU CYS SER GLY ARG GLY LYS CYS GLU CYS SEQRES 41 A 625 GLY SER CYS VAL CYS ILE GLN PRO GLY SER TYR GLY ASP SEQRES 42 A 625 THR CYS GLU LYS CYS PRO THR CYS PRO ASP ALA CYS THR SEQRES 43 A 625 PHE LYS LYS GLU CYS VAL GLU CYS LYS LYS PHE ASP ARG SEQRES 44 A 625 GLY ALA LEU HIS ASP GLU ASN THR CYS ASN ARG TYR CYS SEQRES 45 A 625 ARG ASP GLU ILE GLU SER VAL LYS GLU LEU LYS ASP THR SEQRES 46 A 625 GLY LYS ASP ALA VAL ASN CYS THR TYR LYS ASN GLU ASP SEQRES 47 A 625 ASP CYS VAL VAL ARG PHE GLN TYR TYR GLU ASP SER SER SEQRES 48 A 625 GLY LYS SER ILE LEU TYR VAL VAL GLU GLU PRO GLU CYS SEQRES 49 A 625 PRO HET MG A 701 1 HET MG A 702 1 HET NAG A 703 14 HET NAG A 704 14 HET NAG A 705 14 HET NAG A 706 14 HETNAM MG MAGNESIUM ION HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE FORMUL 2 MG 2(MG 2+) FORMUL 4 NAG 4(C8 H15 N O6) FORMUL 8 HOH *596(H2 O) HELIX 1 AA1 SER A 12 SER A 20 1 9 HELIX 2 AA2 LEU A 40 ASP A 47 1 8 HELIX 3 AA3 GLN A 125 LEU A 143 1 19 HELIX 4 AA4 ASP A 164 LYS A 172 1 9 HELIX 5 AA5 ASP A 173 LEU A 178 1 6 HELIX 6 AA6 ASN A 189 VAL A 201 1 13 HELIX 7 AA7 ARG A 203 GLY A 207 5 5 HELIX 8 AA8 ILE A 230 LYS A 234 5 5 HELIX 9 AA9 LYS A 245 GLN A 248 5 4 HELIX 10 AB1 THR A 249 THR A 255 1 7 HELIX 11 AB2 LEU A 256 ALA A 260 5 5 HELIX 12 AB3 PRO A 263 PHE A 267 1 5 HELIX 13 AB4 THR A 273 ASP A 279 5 7 HELIX 14 AB5 LEU A 280 ILE A 288 1 9 HELIX 15 AB6 CYS A 372 ALA A 378 5 7 HELIX 16 AB7 PRO A 430 GLN A 434 5 5 HELIX 17 AB8 THR A 501 MET A 505 5 5 HELIX 18 AB9 LEU A 510 GLY A 514 5 5 HELIX 19 AC1 ASP A 543 PHE A 557 1 15 HELIX 20 AC2 GLY A 560 GLU A 565 1 6 HELIX 21 AC3 THR A 567 CYS A 572 1 6 SHEET 1 AA1 2 ALA A 24 TRP A 25 0 SHEET 2 AA1 2 CYS A 38 ASP A 39 -1 O ASP A 39 N ALA A 24 SHEET 1 AA2 6 GLU A 60 GLU A 65 0 SHEET 2 AA2 6 ARG A 87 LEU A 92 -1 O ALA A 89 N ARG A 62 SHEET 3 AA2 6 LEU A 362 PHE A 368 1 O GLN A 365 N LEU A 90 SHEET 4 AA2 6 LYS A 349 PRO A 355 -1 N LYS A 349 O VAL A 366 SHEET 5 AA2 6 VAL A 292 ARG A 297 -1 N ARG A 297 O THR A 352 SHEET 6 AA2 6 SER A 322 CYS A 323 -1 O CYS A 323 N VAL A 292 SHEET 1 AA3 5 VAL A 83 SER A 84 0 SHEET 2 AA3 5 SER A 97 ARG A 105 -1 O GLN A 103 N SER A 84 SHEET 3 AA3 5 THR A 331 VAL A 340 -1 O ILE A 336 N PHE A 100 SHEET 4 AA3 5 LEU A 303 THR A 310 -1 N THR A 310 O SER A 333 SHEET 5 AA3 5 VAL A 316 PRO A 318 -1 O ILE A 317 N ALA A 309 SHEET 1 AA4 6 TYR A 159 PHE A 163 0 SHEET 2 AA4 6 TYR A 148 PHE A 155 -1 N GLN A 154 O LYS A 160 SHEET 3 AA4 6 VAL A 112 ASP A 119 1 N PHE A 116 O VAL A 153 SHEET 4 AA4 6 THR A 213 THR A 220 1 O ILE A 217 N LEU A 117 SHEET 5 AA4 6 ILE A 237 ILE A 243 1 O ILE A 241 N ILE A 218 SHEET 6 AA4 6 VAL A 268 LEU A 271 1 O LEU A 271 N GLY A 242 SHEET 1 AA5 3 GLU A 379 PRO A 380 0 SHEET 2 AA5 3 THR A 391 GLU A 393 -1 O PHE A 392 N GLU A 379 SHEET 3 AA5 3 VAL A 396 ARG A 398 -1 O ARG A 398 N THR A 391 SHEET 1 AA6 2 GLY A 436 LEU A 439 0 SHEET 2 AA6 2 GLN A 442 CYS A 445 -1 O GLN A 442 N LEU A 439 SHEET 1 AA7 2 ILE A 453 THR A 454 0 SHEET 2 AA7 2 CYS A 460 ASP A 461 -1 O CYS A 460 N THR A 454 SHEET 1 AA8 2 ARG A 467 TYR A 468 0 SHEET 2 AA8 2 GLU A 471 MET A 472 -1 O GLU A 471 N TYR A 468 SHEET 1 AA9 2 GLY A 477 SER A 480 0 SHEET 2 AA9 2 ASP A 483 CYS A 486 -1 O LEU A 485 N GLN A 478 SHEET 1 AB1 2 TRP A 490 THR A 491 0 SHEET 2 AB1 2 CYS A 497 THR A 498 -1 O CYS A 497 N THR A 491 SHEET 1 AB2 2 GLY A 516 GLU A 519 0 SHEET 2 AB2 2 SER A 522 CYS A 525 -1 O VAL A 524 N LYS A 517 SHEET 1 AB3 4 GLU A 575 VAL A 579 0 SHEET 2 AB3 4 SER A 614 VAL A 619 1 O LEU A 616 N GLU A 577 SHEET 3 AB3 4 VAL A 601 GLU A 608 -1 N TYR A 607 O ILE A 615 SHEET 4 AB3 4 ALA A 589 LYS A 595 -1 N TYR A 594 O VAL A 602 SSBOND 1 CYS A 5 CYS A 23 1555 1555 2.03 SSBOND 2 CYS A 13 CYS A 372 1555 1555 2.03 SSBOND 3 CYS A 16 CYS A 38 1555 1555 2.03 SSBOND 4 CYS A 26 CYS A 49 1555 1555 2.03 SSBOND 5 CYS A 311 CYS A 323 1555 1555 2.04 SSBOND 6 CYS A 343 CYS A 370 1555 1555 2.03 SSBOND 7 CYS A 374 CYS A 394 1555 1555 2.03 SSBOND 8 CYS A 385 CYS A 397 1555 1555 2.03 SSBOND 9 CYS A 399 CYS A 408 1555 1555 2.03 SSBOND 10 CYS A 410 CYS A 440 1555 1555 2.03 SSBOND 11 CYS A 423 CYS A 438 1555 1555 2.03 SSBOND 12 CYS A 432 CYS A 443 1555 1555 2.03 SSBOND 13 CYS A 445 CYS A 458 1555 1555 2.04 SSBOND 14 CYS A 460 CYS A 481 1555 1555 2.04 SSBOND 15 CYS A 465 CYS A 479 1555 1555 2.03 SSBOND 16 CYS A 473 CYS A 484 1555 1555 2.04 SSBOND 17 CYS A 486 CYS A 495 1555 1555 2.04 SSBOND 18 CYS A 497 CYS A 520 1555 1555 2.05 SSBOND 19 CYS A 504 CYS A 518 1555 1555 2.04 SSBOND 20 CYS A 512 CYS A 523 1555 1555 2.05 SSBOND 21 CYS A 525 CYS A 535 1555 1555 2.05 SSBOND 22 CYS A 538 CYS A 541 1555 1555 2.03 SSBOND 23 CYS A 545 CYS A 592 1555 1555 2.03 SSBOND 24 CYS A 551 CYS A 572 1555 1555 2.04 SSBOND 25 CYS A 554 CYS A 568 1555 1555 2.03 SSBOND 26 CYS A 600 CYS A 624 1555 1555 2.03 LINK ND2 ASN A 99 C1 NAG A 706 1555 1555 1.43 LINK ND2 ASN A 308 C1 NAG A 703 1555 1555 1.44 LINK ND2 ASN A 496 C1 NAG A 704 1555 1555 1.44 LINK ND2 ASN A 591 C1 NAG A 705 1555 1555 1.44 LINK OG SER A 121 MG MG A 701 1555 1555 2.16 LINK OG SER A 123 MG MG A 701 1555 1555 2.00 LINK OD2 ASP A 221 MG MG A 701 1555 1555 1.97 LINK MG MG A 701 O HOH A 835 1555 1455 2.06 LINK MG MG A 701 O HOH A 897 1555 1555 2.15 LINK MG MG A 701 O HOH A 941 1555 1455 2.07 LINK MG MG A 702 O HOH A1244 1555 1555 3.00 LINK MG MG A 702 O HOH A1362 1555 2647 2.52 LINK MG MG A 702 O HOH A1391 1555 1555 2.65 CISPEP 1 SER A 84 PRO A 85 0 -2.44 CISPEP 2 LYS A 262 PRO A 263 0 -2.57 CRYST1 55.460 125.290 70.020 90.00 112.95 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018031 0.000000 0.007635 0.00000 SCALE2 0.000000 0.007981 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015509 0.00000