HEADER UNKNOWN FUNCTION 20-DEC-17 6BYA TITLE CRYSTAL STRUCTURE OF LDBPK_091320 WITH INHIBITOR BOUND COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEISHMANIA DONOVANI (STRAIN BPK282A1); SOURCE 3 ORGANISM_TAXID: 981087; SOURCE 4 STRAIN: BPK282A1; SOURCE 5 GENE: LDBPK_091320; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS-RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15-MHL KEYWDS LEISHMANIA, BROMODOMAIN, PARASITOLOGY, STRUCTURAL GENOMICS KEYWDS 2 CONSORTIUM, SGC, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR A.DONG,Y.H.LIN,P.LOPPNAU,C.BOUNTRA,C.H.ARROWSMITH,A.M.EDWARDS,R.HUI, AUTHOR 2 STRUCTURAL GENOMICS CONSORTIUM (SGC) REVDAT 3 04-OCT-23 6BYA 1 REMARK REVDAT 2 24-JAN-18 6BYA 1 AUTHOR JRNL REVDAT 1 17-JAN-18 6BYA 0 JRNL AUTH Y.H.LIN,A.DONG,P.LOPPNAU,C.BOUNTRA,C.H.ARROWSMITH, JRNL AUTH 2 A.M.EDWARDS,R.HUI,STRUCTURAL GENOMICS CONSORTIUM (SGC) JRNL TITL CRYSTAL STRUCTURE OF LDBPK_091320.1 WITH WITH INHIBITOR JRNL TITL 2 BOUND JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.26 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.26 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.37 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 29356 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.239 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.960 REMARK 3 FREE R VALUE TEST SET COUNT : 868 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.000 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 15 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.26 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.34 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.96 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2786 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2200 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2695 REMARK 3 BIN R VALUE (WORKING SET) : 0.2190 REMARK 3 BIN FREE R VALUE : 0.2370 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 3.27 REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.000 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3541 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 142 REMARK 3 SOLVENT ATOMS : 129 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 46.42 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.83660 REMARK 3 B22 (A**2) : -3.83660 REMARK 3 B33 (A**2) : 7.67310 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.280 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.236 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.196 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.229 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.195 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.940 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.920 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3782 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 5166 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1204 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 83 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 687 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3782 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 489 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4476 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 0.96 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.88 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 16.52 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): -37.0038 2.7636 -17.2638 REMARK 3 T TENSOR REMARK 3 T11: -0.0670 T22: -0.0051 REMARK 3 T33: -0.1103 T12: -0.0194 REMARK 3 T13: 0.0092 T23: 0.0144 REMARK 3 L TENSOR REMARK 3 L11: 1.6461 L22: 1.5598 REMARK 3 L33: 2.2374 L12: -0.7383 REMARK 3 L13: -0.1785 L23: 0.7295 REMARK 3 S TENSOR REMARK 3 S11: 0.0428 S12: 0.0190 S13: -0.1292 REMARK 3 S21: 0.0436 S22: -0.0905 S23: 0.0491 REMARK 3 S31: 0.2801 S32: -0.1878 S33: 0.0477 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): -12.7981 10.1999 -16.4403 REMARK 3 T TENSOR REMARK 3 T11: -0.0633 T22: 0.0040 REMARK 3 T33: -0.0952 T12: 0.0032 REMARK 3 T13: -0.0294 T23: 0.0092 REMARK 3 L TENSOR REMARK 3 L11: 1.6684 L22: 2.1228 REMARK 3 L33: 2.3275 L12: 0.8009 REMARK 3 L13: -0.8848 L23: -0.6365 REMARK 3 S TENSOR REMARK 3 S11: -0.0112 S12: -0.0344 S13: -0.0758 REMARK 3 S21: 0.0466 S22: 0.0095 S23: -0.0673 REMARK 3 S31: 0.0597 S32: 0.1732 S33: 0.0017 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { C|* } REMARK 3 ORIGIN FOR THE GROUP (A): -19.7265 -10.4718 -30.5060 REMARK 3 T TENSOR REMARK 3 T11: 0.0209 T22: -0.1161 REMARK 3 T33: -0.0925 T12: 0.0604 REMARK 3 T13: -0.0131 T23: -0.0082 REMARK 3 L TENSOR REMARK 3 L11: 1.7242 L22: 1.2898 REMARK 3 L33: 3.6740 L12: 0.0954 REMARK 3 L13: 0.4645 L23: 0.3624 REMARK 3 S TENSOR REMARK 3 S11: 0.0530 S12: -0.0115 S13: -0.2038 REMARK 3 S21: 0.0885 S22: 0.0221 S23: -0.0928 REMARK 3 S31: 0.3859 S32: 0.1567 S33: -0.0751 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { D|* } REMARK 3 ORIGIN FOR THE GROUP (A): -21.5606 -40.8343 -12.3739 REMARK 3 T TENSOR REMARK 3 T11: -0.0160 T22: -0.2040 REMARK 3 T33: 0.0260 T12: 0.0264 REMARK 3 T13: 0.0542 T23: -0.0245 REMARK 3 L TENSOR REMARK 3 L11: 0.4356 L22: 3.9385 REMARK 3 L33: 2.9844 L12: 1.3293 REMARK 3 L13: -0.1506 L23: -1.2841 REMARK 3 S TENSOR REMARK 3 S11: 0.0579 S12: -0.0509 S13: 0.3886 REMARK 3 S21: 0.0536 S22: -0.1505 S23: 0.3587 REMARK 3 S31: -0.1805 S32: 0.0210 S33: 0.0926 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6BYA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-JAN-18. REMARK 100 THE DEPOSITION ID IS D_1000231390. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-OCT-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97860 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29431 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.260 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : 0.11200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.26 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.90200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 5TCM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.51 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.64 M NAFORMATE AND 0.1M TRIS 8.0, PH REMARK 280 6.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 88.61750 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 41.30750 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 41.30750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 44.30875 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 41.30750 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 41.30750 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 132.92625 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 41.30750 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 41.30750 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 44.30875 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 41.30750 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 41.30750 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 132.92625 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 88.61750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -10 REMARK 465 HIS A -9 REMARK 465 HIS A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 SER A -3 REMARK 465 SER A -2 REMARK 465 GLY A -1 REMARK 465 ARG A 0 REMARK 465 GLU A 1 REMARK 465 GLY A 120 REMARK 465 GLY A 121 REMARK 465 CYS A 122 REMARK 465 MET B -10 REMARK 465 HIS B -9 REMARK 465 SER B -3 REMARK 465 SER B -2 REMARK 465 GLY B -1 REMARK 465 ARG B 0 REMARK 465 GLU B 1 REMARK 465 ASN B 2 REMARK 465 LEU B 3 REMARK 465 TYR B 4 REMARK 465 GLY B 120 REMARK 465 GLY B 121 REMARK 465 CYS B 122 REMARK 465 MET C -10 REMARK 465 HIS C -9 REMARK 465 HIS C -8 REMARK 465 HIS C -7 REMARK 465 HIS C -6 REMARK 465 HIS C -5 REMARK 465 HIS C -4 REMARK 465 SER C -3 REMARK 465 SER C -2 REMARK 465 GLY C -1 REMARK 465 ARG C 0 REMARK 465 GLU C 1 REMARK 465 ASN C 2 REMARK 465 GLY C 120 REMARK 465 GLY C 121 REMARK 465 CYS C 122 REMARK 465 MET D -10 REMARK 465 HIS D -9 REMARK 465 HIS D -8 REMARK 465 HIS D -7 REMARK 465 HIS D -6 REMARK 465 HIS D -5 REMARK 465 HIS D -4 REMARK 465 SER D -3 REMARK 465 SER D -2 REMARK 465 GLY D -1 REMARK 465 ARG D 0 REMARK 465 GLU D 1 REMARK 465 ASN D 119 REMARK 465 GLY D 120 REMARK 465 GLY D 121 REMARK 465 CYS D 122 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 2 CG OD1 ND2 REMARK 470 LYS A 46 CE NZ REMARK 470 LEU A 70 CD1 CD2 REMARK 470 ARG A 71 NE CZ NH1 NH2 REMARK 470 ARG A 105 CD NE CZ NH1 NH2 REMARK 470 LEU A 116 CG CD1 CD2 REMARK 470 GLU A 117 CD OE1 OE2 REMARK 470 ASN A 119 C O CB CG OD1 ND2 REMARK 470 GLN B 6 CG CD OE1 NE2 REMARK 470 GLU B 42 CG CD OE1 OE2 REMARK 470 LYS B 46 CD CE NZ REMARK 470 LEU B 70 CD1 CD2 REMARK 470 GLU B 98 CD OE1 OE2 REMARK 470 LYS B 102 NZ REMARK 470 ARG B 105 CD NE CZ NH1 NH2 REMARK 470 LEU B 116 CG CD1 CD2 REMARK 470 TYR C 4 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLN C 6 CG CD OE1 NE2 REMARK 470 LYS C 46 CD CE NZ REMARK 470 GLU C 98 CD OE1 OE2 REMARK 470 LYS C 102 NZ REMARK 470 ARG C 105 NE CZ NH1 NH2 REMARK 470 GLU C 109 CD OE1 OE2 REMARK 470 LEU C 116 CG CD1 CD2 REMARK 470 GLU C 117 OE1 OE2 REMARK 470 ASN D 9 CG OD1 ND2 REMARK 470 GLU D 10 CD OE1 OE2 REMARK 470 ARG D 18 CD NE CZ NH1 NH2 REMARK 470 ARG D 22 NE CZ NH1 NH2 REMARK 470 VAL D 33 CG1 CG2 REMARK 470 LEU D 34 CG CD1 CD2 REMARK 470 GLU D 35 CG CD OE1 OE2 REMARK 470 THR D 36 CG2 REMARK 470 TYR D 37 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU D 42 CG CD OE1 OE2 REMARK 470 SER D 43 OG REMARK 470 THR D 45 CG2 REMARK 470 LYS D 46 CG CD CE NZ REMARK 470 VAL D 47 CG1 CG2 REMARK 470 ARG D 50 CG CD NE CZ NH1 NH2 REMARK 470 GLN D 59 CG CD OE1 NE2 REMARK 470 LYS D 60 NZ REMARK 470 GLU D 63 CG CD OE1 OE2 REMARK 470 LEU D 70 CD1 CD2 REMARK 470 ARG D 71 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 73 CG CD OE1 OE2 REMARK 470 SER D 84 OG REMARK 470 VAL D 87 CG1 CG2 REMARK 470 THR D 93 OG1 CG2 REMARK 470 GLU D 98 CG CD OE1 OE2 REMARK 470 LYS D 102 CG CD CE NZ REMARK 470 LEU D 108 CD1 CD2 REMARK 470 GLU D 117 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 118 37.17 -94.61 REMARK 500 HIS B 26 19.40 58.22 REMARK 500 CYS C 48 78.81 -119.24 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 2LO D 1000 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 2LO A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 2LO B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 2LO C 1000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 2LO D 1000 DBREF 6BYA A 8 122 UNP E9BA17 E9BA17_LEIDB 8 122 DBREF 6BYA B 8 122 UNP E9BA17 E9BA17_LEIDB 8 122 DBREF 6BYA C 8 122 UNP E9BA17 E9BA17_LEIDB 8 122 DBREF 6BYA D 8 122 UNP E9BA17 E9BA17_LEIDB 8 122 SEQADV 6BYA MET A -10 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA HIS A -9 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA HIS A -8 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA HIS A -7 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA HIS A -6 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA HIS A -5 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA HIS A -4 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA SER A -3 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA SER A -2 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA GLY A -1 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA ARG A 0 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA GLU A 1 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA ASN A 2 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA LEU A 3 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA TYR A 4 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA PHE A 5 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA GLN A 6 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA GLY A 7 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA MET B -10 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA HIS B -9 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA HIS B -8 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA HIS B -7 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA HIS B -6 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA HIS B -5 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA HIS B -4 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA SER B -3 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA SER B -2 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA GLY B -1 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA ARG B 0 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA GLU B 1 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA ASN B 2 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA LEU B 3 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA TYR B 4 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA PHE B 5 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA GLN B 6 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA GLY B 7 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA MET C -10 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA HIS C -9 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA HIS C -8 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA HIS C -7 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA HIS C -6 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA HIS C -5 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA HIS C -4 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA SER C -3 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA SER C -2 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA GLY C -1 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA ARG C 0 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA GLU C 1 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA ASN C 2 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA LEU C 3 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA TYR C 4 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA PHE C 5 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA GLN C 6 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA GLY C 7 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA MET D -10 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA HIS D -9 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA HIS D -8 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA HIS D -7 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA HIS D -6 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA HIS D -5 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA HIS D -4 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA SER D -3 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA SER D -2 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA GLY D -1 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA ARG D 0 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA GLU D 1 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA ASN D 2 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA LEU D 3 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA TYR D 4 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA PHE D 5 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA GLN D 6 UNP E9BA17 EXPRESSION TAG SEQADV 6BYA GLY D 7 UNP E9BA17 EXPRESSION TAG SEQRES 1 A 133 MET HIS HIS HIS HIS HIS HIS SER SER GLY ARG GLU ASN SEQRES 2 A 133 LEU TYR PHE GLN GLY TYR ASN GLU ALA ASP VAL ALA ALA SEQRES 3 A 133 LEU VAL ARG SER LEU ASP ARG ALA GLU ASP HIS HIS ILE SEQRES 4 A 133 PHE ALA VAL ASP VAL LEU GLU THR TYR PRO TYR LEU ALA SEQRES 5 A 133 GLU SER TYR THR LYS VAL CYS PRO ARG ARG CYS ASP LEU SEQRES 6 A 133 ALA THR ALA ALA GLN LYS ALA LEU GLU GLY ALA TYR SER SEQRES 7 A 133 TYR ASP LEU ARG LEU GLU GLY LEU LYS ALA ASP ILE ALA SEQRES 8 A 133 LEU MET ALA SER ASN CYS VAL ALA TYR ASN GLY PRO THR SEQRES 9 A 133 SER ALA TYR ALA GLU THR ALA ALA LYS PHE GLU ARG TYR SEQRES 10 A 133 ALA LEU GLU GLN ILE ASP ALA PHE VAL LEU GLU HIS ASN SEQRES 11 A 133 GLY GLY CYS SEQRES 1 B 133 MET HIS HIS HIS HIS HIS HIS SER SER GLY ARG GLU ASN SEQRES 2 B 133 LEU TYR PHE GLN GLY TYR ASN GLU ALA ASP VAL ALA ALA SEQRES 3 B 133 LEU VAL ARG SER LEU ASP ARG ALA GLU ASP HIS HIS ILE SEQRES 4 B 133 PHE ALA VAL ASP VAL LEU GLU THR TYR PRO TYR LEU ALA SEQRES 5 B 133 GLU SER TYR THR LYS VAL CYS PRO ARG ARG CYS ASP LEU SEQRES 6 B 133 ALA THR ALA ALA GLN LYS ALA LEU GLU GLY ALA TYR SER SEQRES 7 B 133 TYR ASP LEU ARG LEU GLU GLY LEU LYS ALA ASP ILE ALA SEQRES 8 B 133 LEU MET ALA SER ASN CYS VAL ALA TYR ASN GLY PRO THR SEQRES 9 B 133 SER ALA TYR ALA GLU THR ALA ALA LYS PHE GLU ARG TYR SEQRES 10 B 133 ALA LEU GLU GLN ILE ASP ALA PHE VAL LEU GLU HIS ASN SEQRES 11 B 133 GLY GLY CYS SEQRES 1 C 133 MET HIS HIS HIS HIS HIS HIS SER SER GLY ARG GLU ASN SEQRES 2 C 133 LEU TYR PHE GLN GLY TYR ASN GLU ALA ASP VAL ALA ALA SEQRES 3 C 133 LEU VAL ARG SER LEU ASP ARG ALA GLU ASP HIS HIS ILE SEQRES 4 C 133 PHE ALA VAL ASP VAL LEU GLU THR TYR PRO TYR LEU ALA SEQRES 5 C 133 GLU SER TYR THR LYS VAL CYS PRO ARG ARG CYS ASP LEU SEQRES 6 C 133 ALA THR ALA ALA GLN LYS ALA LEU GLU GLY ALA TYR SER SEQRES 7 C 133 TYR ASP LEU ARG LEU GLU GLY LEU LYS ALA ASP ILE ALA SEQRES 8 C 133 LEU MET ALA SER ASN CYS VAL ALA TYR ASN GLY PRO THR SEQRES 9 C 133 SER ALA TYR ALA GLU THR ALA ALA LYS PHE GLU ARG TYR SEQRES 10 C 133 ALA LEU GLU GLN ILE ASP ALA PHE VAL LEU GLU HIS ASN SEQRES 11 C 133 GLY GLY CYS SEQRES 1 D 133 MET HIS HIS HIS HIS HIS HIS SER SER GLY ARG GLU ASN SEQRES 2 D 133 LEU TYR PHE GLN GLY TYR ASN GLU ALA ASP VAL ALA ALA SEQRES 3 D 133 LEU VAL ARG SER LEU ASP ARG ALA GLU ASP HIS HIS ILE SEQRES 4 D 133 PHE ALA VAL ASP VAL LEU GLU THR TYR PRO TYR LEU ALA SEQRES 5 D 133 GLU SER TYR THR LYS VAL CYS PRO ARG ARG CYS ASP LEU SEQRES 6 D 133 ALA THR ALA ALA GLN LYS ALA LEU GLU GLY ALA TYR SER SEQRES 7 D 133 TYR ASP LEU ARG LEU GLU GLY LEU LYS ALA ASP ILE ALA SEQRES 8 D 133 LEU MET ALA SER ASN CYS VAL ALA TYR ASN GLY PRO THR SEQRES 9 D 133 SER ALA TYR ALA GLU THR ALA ALA LYS PHE GLU ARG TYR SEQRES 10 D 133 ALA LEU GLU GLN ILE ASP ALA PHE VAL LEU GLU HIS ASN SEQRES 11 D 133 GLY GLY CYS HET 2LO A 201 36 HET UNX A 202 1 HET 2LO B 201 36 HET UNX B 202 1 HET 2LO C1000 36 HET UNX C1001 1 HET 2LO D1000 31 HETNAM 2LO 2-[2-(3-CHLORO-4-METHOXYPHENYL)ETHYL]-5-(3,5-DIMETHYL- HETNAM 2 2LO 1,2-OXAZOL-4-YL)-1-[(2S)-2-(MORPHOLIN-4-YL)PROPYL]-1H- HETNAM 3 2LO BENZIMIDAZOLE HETNAM UNX UNKNOWN ATOM OR ION FORMUL 5 2LO 4(C28 H33 CL N4 O3) FORMUL 6 UNX 3(X) FORMUL 12 HOH *129(H2 O) HELIX 1 AA1 ASN A 9 SER A 19 1 11 HELIX 2 AA2 LEU A 20 ASP A 21 5 2 HELIX 3 AA3 ARG A 22 HIS A 26 5 5 HELIX 4 AA4 ASP A 32 TYR A 37 1 6 HELIX 5 AA5 LEU A 40 CYS A 48 1 9 HELIX 6 AA6 ASP A 53 GLU A 63 1 11 HELIX 7 AA7 LEU A 72 GLY A 91 1 20 HELIX 8 AA8 SER A 94 HIS A 118 1 25 HELIX 9 AA9 ASN B 9 SER B 19 1 11 HELIX 10 AB1 LEU B 20 ASP B 21 5 2 HELIX 11 AB2 ARG B 22 HIS B 26 5 5 HELIX 12 AB3 ASP B 32 TYR B 37 1 6 HELIX 13 AB4 LEU B 40 CYS B 48 1 9 HELIX 14 AB5 ASP B 53 GLY B 64 1 12 HELIX 15 AB6 LEU B 72 GLY B 91 1 20 HELIX 16 AB7 SER B 94 HIS B 118 1 25 HELIX 17 AB8 ASN C 9 LEU C 20 1 12 HELIX 18 AB9 ASP C 21 HIS C 26 5 6 HELIX 19 AC1 ASP C 32 TYR C 37 1 6 HELIX 20 AC2 LEU C 40 CYS C 48 1 9 HELIX 21 AC3 ASP C 53 LEU C 62 1 10 HELIX 22 AC4 LEU C 72 GLY C 91 1 20 HELIX 23 AC5 SER C 94 HIS C 118 1 25 HELIX 24 AC6 ASN D 9 SER D 19 1 11 HELIX 25 AC7 ASP D 32 TYR D 37 1 6 HELIX 26 AC8 LEU D 40 CYS D 48 1 9 HELIX 27 AC9 ASP D 53 GLY D 64 1 12 HELIX 28 AD1 LEU D 72 GLY D 91 1 20 HELIX 29 AD2 SER D 94 HIS D 118 1 25 SITE 1 AC1 10 ILE A 28 VAL A 33 TYR A 37 ASN A 90 SITE 2 AC1 10 ALA A 95 TYR A 96 THR A 99 TYR B 39 SITE 3 AC1 10 2LO B 201 GLU D 109 SITE 1 AC2 13 TYR A 37 TYR A 89 2LO A 201 HIS B 26 SITE 2 AC2 13 HIS B 27 ILE B 28 VAL B 33 THR B 36 SITE 3 AC2 13 TYR B 37 ASN B 90 ALA B 95 TYR B 96 SITE 4 AC2 13 LEU D 116 SITE 1 AC3 18 HIS B -7 ALA B 11 ASP B 12 HIS C 26 SITE 2 AC3 18 HIS C 27 ILE C 28 VAL C 33 THR C 36 SITE 3 AC3 18 TYR C 37 TYR C 89 ASN C 90 ALA C 95 SITE 4 AC3 18 TYR C 96 THR C 99 LEU D 3 PHE D 5 SITE 5 AC3 18 GLN D 6 TYR D 68 SITE 1 AC4 8 TYR A 4 GLU C 109 HIS D 26 HIS D 27 SITE 2 AC4 8 ILE D 28 TYR D 89 ASN D 90 TYR D 96 CRYST1 82.615 82.615 177.235 90.00 90.00 90.00 P 41 21 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012104 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012104 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005642 0.00000