HEADER VIRAL PROTEIN 02-FEB-18 6CB7 TITLE CRYSTAL STRUCTURE OF VACCINIA VIRUS A6 N-TERMINUS (SPACE GROUP C2) COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN A6; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VACCINIA VIRUS (STRAIN COPENHAGEN); SOURCE 3 ORGANISM_COMMON: VACV; SOURCE 4 ORGANISM_TAXID: 10249; SOURCE 5 STRAIN: COPENHAGEN; SOURCE 6 GENE: A6L; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21 GOLD KEYWDS VACCINIA VIRUS, A6, POXVIRUSES, VIRION CORE PROTEIN, VIRION KEYWDS 2 MORPHOGENESIS, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.HAN,B.ZHANG,J.DENG REVDAT 2 04-OCT-23 6CB7 1 REMARK LINK REVDAT 1 12-DEC-18 6CB7 0 JRNL AUTH P.K.PATHAK,S.PENG,X.MENG,Y.HAN,B.ZHANG,F.ZHANG,Y.XIANG, JRNL AUTH 2 J.DENG JRNL TITL STRUCTURE OF A LIPID-BOUND VIRAL MEMBRANE ASSEMBLY PROTEIN JRNL TITL 2 REVEALS A MODALITY FOR ENCLOSING THE LIPID BILAYER. JRNL REF PROC. NATL. ACAD. SCI. V. 115 7028 2018 JRNL REF 2 U.S.A. JRNL REFN ESSN 1091-6490 JRNL PMID 29915071 JRNL DOI 10.1073/PNAS.1805855115 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.6_289 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.29 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.100 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 3 NUMBER OF REFLECTIONS : 33073 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.190 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.020 REMARK 3 FREE R VALUE TEST SET COUNT : 3314 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.2944 - 3.4395 0.99 3109 364 0.1562 0.1691 REMARK 3 2 3.4395 - 2.7306 1.00 3142 346 0.1780 0.2044 REMARK 3 3 2.7306 - 2.3856 0.99 3101 352 0.1645 0.1691 REMARK 3 4 2.3856 - 2.1675 0.99 3113 341 0.1545 0.2001 REMARK 3 5 2.1675 - 2.0122 0.99 3109 353 0.1492 0.1695 REMARK 3 6 2.0122 - 1.8936 0.98 3070 332 0.1584 0.1925 REMARK 3 7 1.8936 - 1.7988 0.97 3048 339 0.1643 0.2141 REMARK 3 8 1.7988 - 1.7205 0.96 3008 322 0.1655 0.2220 REMARK 3 9 1.7205 - 1.6542 0.91 2848 316 0.1695 0.1946 REMARK 3 10 1.6542 - 1.5972 0.71 2211 249 0.1807 0.2120 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 40.73 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.680 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.67440 REMARK 3 B22 (A**2) : 1.67440 REMARK 3 B33 (A**2) : -3.34870 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 991 REMARK 3 ANGLE : 0.904 1346 REMARK 3 CHIRALITY : 0.064 161 REMARK 3 PLANARITY : 0.005 166 REMARK 3 DIHEDRAL : 14.352 363 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 17 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 1:5) REMARK 3 ORIGIN FOR THE GROUP (A): 3.2865 -27.8708 16.2637 REMARK 3 T TENSOR REMARK 3 T11: 0.1596 T22: 0.1012 REMARK 3 T33: 0.1373 T12: 0.0033 REMARK 3 T13: 0.0150 T23: 0.0039 REMARK 3 L TENSOR REMARK 3 L11: 5.8942 L22: 1.4419 REMARK 3 L33: 9.7638 L12: -1.1586 REMARK 3 L13: -1.9533 L23: -2.9507 REMARK 3 S TENSOR REMARK 3 S11: -0.3070 S12: -0.1209 S13: -0.2076 REMARK 3 S21: -0.4088 S22: 0.1906 S23: 0.2064 REMARK 3 S31: 1.0983 S32: 0.0270 S33: 0.1288 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 6:13) REMARK 3 ORIGIN FOR THE GROUP (A): 2.0810 -20.1952 11.0411 REMARK 3 T TENSOR REMARK 3 T11: 0.1508 T22: 0.1332 REMARK 3 T33: 0.1810 T12: 0.0018 REMARK 3 T13: -0.0066 T23: -0.0023 REMARK 3 L TENSOR REMARK 3 L11: 0.2675 L22: 3.3465 REMARK 3 L33: 1.1576 L12: 0.0435 REMARK 3 L13: -0.1054 L23: -1.6103 REMARK 3 S TENSOR REMARK 3 S11: -0.0071 S12: -0.0303 S13: 0.1574 REMARK 3 S21: 0.1675 S22: -0.0056 S23: 0.4682 REMARK 3 S31: -0.2075 S32: -0.1140 S33: 0.0166 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 14:19) REMARK 3 ORIGIN FOR THE GROUP (A): 0.0806 -13.3805 3.8681 REMARK 3 T TENSOR REMARK 3 T11: 0.1804 T22: 0.1708 REMARK 3 T33: 0.1834 T12: 0.0404 REMARK 3 T13: -0.0133 T23: -0.0051 REMARK 3 L TENSOR REMARK 3 L11: 3.1470 L22: 0.7763 REMARK 3 L33: 6.4938 L12: -1.1288 REMARK 3 L13: 1.7881 L23: -0.6621 REMARK 3 S TENSOR REMARK 3 S11: 0.0231 S12: 0.0127 S13: 0.5329 REMARK 3 S21: 0.0945 S22: -0.2329 S23: 0.1538 REMARK 3 S31: -0.3164 S32: -0.5065 S33: 0.1622 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 20:27) REMARK 3 ORIGIN FOR THE GROUP (A): -2.6885 -11.8037 -2.9457 REMARK 3 T TENSOR REMARK 3 T11: 0.2930 T22: 0.2213 REMARK 3 T33: 0.2339 T12: 0.0853 REMARK 3 T13: -0.0631 T23: 0.0405 REMARK 3 L TENSOR REMARK 3 L11: 3.2328 L22: 2.1791 REMARK 3 L33: 8.7128 L12: -1.1648 REMARK 3 L13: 1.7864 L23: -4.3076 REMARK 3 S TENSOR REMARK 3 S11: -0.0350 S12: 0.2503 S13: 0.6715 REMARK 3 S21: -0.1700 S22: -0.2107 S23: 0.2843 REMARK 3 S31: -0.7961 S32: -0.3900 S33: 0.1312 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 28:36) REMARK 3 ORIGIN FOR THE GROUP (A): 1.1085 -28.2745 3.5366 REMARK 3 T TENSOR REMARK 3 T11: 0.1410 T22: 0.1645 REMARK 3 T33: 0.2099 T12: -0.0158 REMARK 3 T13: -0.0129 T23: -0.0220 REMARK 3 L TENSOR REMARK 3 L11: 0.0330 L22: 3.7638 REMARK 3 L33: 3.8908 L12: -0.0342 REMARK 3 L13: -0.2325 L23: -1.1238 REMARK 3 S TENSOR REMARK 3 S11: -0.0278 S12: -0.0418 S13: -0.3647 REMARK 3 S21: 0.0756 S22: 0.0917 S23: 0.5038 REMARK 3 S31: 0.1853 S32: -0.4715 S33: -0.0283 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 37:44) REMARK 3 ORIGIN FOR THE GROUP (A): 13.3639 -28.5467 4.8902 REMARK 3 T TENSOR REMARK 3 T11: 0.1371 T22: 0.0961 REMARK 3 T33: 0.1521 T12: 0.0075 REMARK 3 T13: -0.0288 T23: -0.0039 REMARK 3 L TENSOR REMARK 3 L11: 5.0205 L22: 0.4317 REMARK 3 L33: 2.5931 L12: -0.3830 REMARK 3 L13: -0.0211 L23: 0.9675 REMARK 3 S TENSOR REMARK 3 S11: -0.2102 S12: -0.1163 S13: -0.3130 REMARK 3 S21: -0.0343 S22: 0.0458 S23: 0.2612 REMARK 3 S31: 0.2562 S32: -0.1262 S33: 0.0727 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 45:55) REMARK 3 ORIGIN FOR THE GROUP (A): 22.0925 -21.7198 9.2889 REMARK 3 T TENSOR REMARK 3 T11: 0.1365 T22: 0.1588 REMARK 3 T33: 0.1444 T12: -0.0133 REMARK 3 T13: 0.0177 T23: -0.0121 REMARK 3 L TENSOR REMARK 3 L11: 0.4982 L22: 2.2873 REMARK 3 L33: 1.1682 L12: 0.6565 REMARK 3 L13: 0.6093 L23: -0.0340 REMARK 3 S TENSOR REMARK 3 S11: 0.0535 S12: -0.0687 S13: 0.0288 REMARK 3 S21: 0.0954 S22: 0.0455 S23: -0.2120 REMARK 3 S31: -0.1915 S32: 0.2214 S33: -0.0457 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 56:61) REMARK 3 ORIGIN FOR THE GROUP (A): 21.3287 -13.4708 13.4024 REMARK 3 T TENSOR REMARK 3 T11: 0.2026 T22: 0.1133 REMARK 3 T33: 0.1689 T12: -0.0627 REMARK 3 T13: 0.0022 T23: -0.0019 REMARK 3 L TENSOR REMARK 3 L11: 3.3161 L22: 0.9953 REMARK 3 L33: 4.0298 L12: -0.4844 REMARK 3 L13: -0.4134 L23: -1.8015 REMARK 3 S TENSOR REMARK 3 S11: -0.0288 S12: 0.0937 S13: 0.5298 REMARK 3 S21: 0.1690 S22: -0.1292 S23: -0.4878 REMARK 3 S31: -0.9098 S32: 0.5138 S33: 0.0548 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN A AND RESID 62:67) REMARK 3 ORIGIN FOR THE GROUP (A): 16.9004 -14.4770 5.5050 REMARK 3 T TENSOR REMARK 3 T11: 0.1638 T22: 0.1387 REMARK 3 T33: 0.1451 T12: -0.0129 REMARK 3 T13: 0.0231 T23: -0.0030 REMARK 3 L TENSOR REMARK 3 L11: 2.1707 L22: 1.2774 REMARK 3 L33: 0.4935 L12: 0.5024 REMARK 3 L13: -0.5445 L23: -0.3344 REMARK 3 S TENSOR REMARK 3 S11: 0.1347 S12: 0.2601 S13: 0.0373 REMARK 3 S21: -0.1173 S22: -0.0492 S23: -0.0082 REMARK 3 S31: -0.0534 S32: 0.0480 S33: -0.0711 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN A AND RESID 68:73) REMARK 3 ORIGIN FOR THE GROUP (A): 11.1480 -19.5432 -0.9932 REMARK 3 T TENSOR REMARK 3 T11: 0.1705 T22: 0.1255 REMARK 3 T33: 0.1233 T12: 0.0151 REMARK 3 T13: -0.0045 T23: -0.0182 REMARK 3 L TENSOR REMARK 3 L11: 1.4222 L22: 0.1020 REMARK 3 L33: 1.1292 L12: -0.1119 REMARK 3 L13: 0.2028 L23: 0.3150 REMARK 3 S TENSOR REMARK 3 S11: 0.1147 S12: -0.0242 S13: -0.0727 REMARK 3 S21: -0.0984 S22: -0.0791 S23: 0.0033 REMARK 3 S31: -0.2538 S32: -0.0871 S33: -0.0303 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN A AND RESID 74:77) REMARK 3 ORIGIN FOR THE GROUP (A): 2.4852 -21.6003 -0.5358 REMARK 3 T TENSOR REMARK 3 T11: 0.1627 T22: 0.1825 REMARK 3 T33: 0.1958 T12: 0.0088 REMARK 3 T13: -0.0278 T23: -0.0259 REMARK 3 L TENSOR REMARK 3 L11: 2.7500 L22: 0.1767 REMARK 3 L33: 1.9377 L12: -0.5776 REMARK 3 L13: 1.7288 L23: -0.3787 REMARK 3 S TENSOR REMARK 3 S11: 0.0381 S12: 0.2397 S13: -0.1623 REMARK 3 S21: 0.0240 S22: -0.0959 S23: 0.2221 REMARK 3 S31: -0.3797 S32: -0.1604 S33: 0.0563 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN A AND RESID 78:83) REMARK 3 ORIGIN FOR THE GROUP (A): 4.1570 -20.2006 -6.6778 REMARK 3 T TENSOR REMARK 3 T11: 0.2587 T22: 0.2288 REMARK 3 T33: 0.1147 T12: 0.0304 REMARK 3 T13: -0.0590 T23: -0.0514 REMARK 3 L TENSOR REMARK 3 L11: 1.4417 L22: 1.7229 REMARK 3 L33: 1.5906 L12: -0.6113 REMARK 3 L13: -1.1589 L23: 1.4755 REMARK 3 S TENSOR REMARK 3 S11: 0.2768 S12: 0.5272 S13: -0.0910 REMARK 3 S21: -0.0281 S22: -0.2031 S23: -0.1643 REMARK 3 S31: -0.3721 S32: -0.2809 S33: 0.0185 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: (CHAIN A AND RESID 84:94) REMARK 3 ORIGIN FOR THE GROUP (A): 8.7310 -7.7743 5.4912 REMARK 3 T TENSOR REMARK 3 T11: 0.2401 T22: 0.0718 REMARK 3 T33: 0.1094 T12: 0.0177 REMARK 3 T13: 0.0151 T23: 0.0065 REMARK 3 L TENSOR REMARK 3 L11: 0.3091 L22: 5.6292 REMARK 3 L33: 1.9487 L12: -0.6208 REMARK 3 L13: -0.0788 L23: 3.0827 REMARK 3 S TENSOR REMARK 3 S11: 0.1098 S12: 0.0512 S13: 0.0668 REMARK 3 S21: -0.6861 S22: 0.0222 S23: -0.2922 REMARK 3 S31: -0.6858 S32: -0.0338 S33: -0.1183 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: (CHAIN A AND RESID 95:99) REMARK 3 ORIGIN FOR THE GROUP (A): 7.9669 -7.7230 13.8771 REMARK 3 T TENSOR REMARK 3 T11: 0.1547 T22: 0.0787 REMARK 3 T33: 0.1289 T12: 0.0107 REMARK 3 T13: 0.0031 T23: -0.0186 REMARK 3 L TENSOR REMARK 3 L11: 0.3774 L22: 1.4967 REMARK 3 L33: 0.6153 L12: -0.1959 REMARK 3 L13: 0.0369 L23: 0.8582 REMARK 3 S TENSOR REMARK 3 S11: 0.0753 S12: -0.2176 S13: 0.2110 REMARK 3 S21: 0.3266 S22: -0.1135 S23: 0.1903 REMARK 3 S31: -0.0201 S32: 0.1114 S33: -0.0124 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: (CHAIN A AND RESID 100:106) REMARK 3 ORIGIN FOR THE GROUP (A): 11.1142 -16.6285 13.1770 REMARK 3 T TENSOR REMARK 3 T11: 0.1481 T22: 0.0852 REMARK 3 T33: 0.1085 T12: 0.0038 REMARK 3 T13: -0.0014 T23: 0.0047 REMARK 3 L TENSOR REMARK 3 L11: 1.5476 L22: 0.7718 REMARK 3 L33: 2.0765 L12: -0.2196 REMARK 3 L13: 0.6633 L23: -0.8619 REMARK 3 S TENSOR REMARK 3 S11: 0.0459 S12: -0.1740 S13: 0.1403 REMARK 3 S21: -0.0431 S22: -0.1609 S23: 0.0689 REMARK 3 S31: -0.1764 S32: -0.1382 S33: 0.0927 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: (CHAIN A AND RESID 107:112) REMARK 3 ORIGIN FOR THE GROUP (A): 12.8542 -25.7297 13.5303 REMARK 3 T TENSOR REMARK 3 T11: 0.1476 T22: 0.0993 REMARK 3 T33: 0.1159 T12: -0.0013 REMARK 3 T13: -0.0036 T23: -0.0016 REMARK 3 L TENSOR REMARK 3 L11: 0.5252 L22: 0.7386 REMARK 3 L33: 1.9821 L12: 0.4749 REMARK 3 L13: -0.4570 L23: -1.0036 REMARK 3 S TENSOR REMARK 3 S11: 0.0123 S12: 0.0301 S13: 0.0756 REMARK 3 S21: 0.1142 S22: 0.0742 S23: 0.3305 REMARK 3 S31: -0.0150 S32: -0.2330 S33: -0.0637 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: (CHAIN A AND RESID 113:117) REMARK 3 ORIGIN FOR THE GROUP (A): 17.1679 -33.9668 13.2570 REMARK 3 T TENSOR REMARK 3 T11: 0.2527 T22: 0.1693 REMARK 3 T33: 0.1339 T12: 0.0398 REMARK 3 T13: 0.0303 T23: 0.0275 REMARK 3 L TENSOR REMARK 3 L11: 4.6235 L22: 8.3743 REMARK 3 L33: 0.9415 L12: -4.4902 REMARK 3 L13: -0.3500 L23: 0.5154 REMARK 3 S TENSOR REMARK 3 S11: 0.0638 S12: -0.0990 S13: -0.6635 REMARK 3 S21: -0.1122 S22: -0.1761 S23: 0.2247 REMARK 3 S31: 0.1648 S32: 0.6282 S33: 0.0516 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6CB7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-FEB-18. REMARK 100 THE DEPOSITION ID IS D_1000232471. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-AUG-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97918 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33647 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 200 DATA REDUNDANCY : 11.70 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06900 REMARK 200 FOR THE DATA SET : 34.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 78.4 REMARK 200 DATA REDUNDANCY IN SHELL : 7.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.58000 REMARK 200 FOR SHELL : 6.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: 6CB6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.01M NICL2, 0.1M TRIS PH8.5 20% REMARK 280 PEG2000, EVAPORATION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 73.97500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 21.41750 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 21.41750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 36.98750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 21.41750 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 21.41750 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 110.96250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 21.41750 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 21.41750 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 36.98750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 21.41750 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 21.41750 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 110.96250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 73.97500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 346 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 412 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 428 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 429 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 119 REMARK 465 MET A 120 REMARK 465 TYR A 121 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 16 NZ REMARK 480 ASN A 18 CG REMARK 480 ARG A 21 NE REMARK 480 ASP A 33 CG REMARK 480 GLU A 58 CD OE2 REMARK 480 ASP A 60 OD1 OD2 REMARK 480 LYS A 91 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 50 -74.36 -116.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 201 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 0 N REMARK 620 2 HIS A 0 O 78.3 REMARK 620 3 HIS A 0 ND1 87.4 87.2 REMARK 620 4 HOH A 304 O 95.6 98.6 173.9 REMARK 620 5 HOH A 337 O 96.6 173.9 89.3 85.0 REMARK 620 6 HOH A 404 O 170.4 92.1 91.5 86.6 93.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue NI A 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6CB6 RELATED DB: PDB DBREF 6CB7 A 1 121 UNP P20985 A6_VACCC 1 121 SEQADV 6CB7 HIS A 0 UNP P20985 EXPRESSION TAG SEQADV 6CB7 ALA A 47 UNP P20985 GLU 47 ENGINEERED MUTATION SEQADV 6CB7 ALA A 48 UNP P20985 LYS 48 ENGINEERED MUTATION SEQADV 6CB7 ALA A 49 UNP P20985 LYS 49 ENGINEERED MUTATION SEQADV 6CB7 TYR A 94 UNP P20985 ASP 94 CONFLICT SEQADV 6CB7 LYS A 96 UNP P20985 GLU 96 CONFLICT SEQRES 1 A 122 HIS MET ASP LYS LEU ARG VAL LEU TYR ASP GLU PHE VAL SEQRES 2 A 122 THR ILE SER LYS ASP ASN LEU GLU ARG GLU THR GLY LEU SEQRES 3 A 122 SER ALA SER ASP VAL ASP MET ASP PHE ASP LEU ASN ILE SEQRES 4 A 122 PHE MET THR LEU VAL PRO VAL LEU ALA ALA ALA VAL CYS SEQRES 5 A 122 ALA ILE THR PRO THR ILE GLU ASP ASP LYS ILE VAL THR SEQRES 6 A 122 MET MET LYS TYR CYS SER TYR GLN SER PHE SER PHE TRP SEQRES 7 A 122 PHE LEU LYS SER GLY ALA VAL VAL LYS SER VAL TYR ASN SEQRES 8 A 122 LYS LEU ASP TYR VAL LYS LYS GLU LYS PHE VAL ALA THR SEQRES 9 A 122 PHE ARG ASP MET LEU LEU ASN VAL GLN THR LEU ILE SER SEQRES 10 A 122 LEU ASN SER MET TYR HET NI A 201 1 HETNAM NI NICKEL (II) ION FORMUL 2 NI NI 2+ FORMUL 3 HOH *147(H2 O) HELIX 1 AA1 MET A 1 GLY A 24 1 24 HELIX 2 AA2 ASP A 31 VAL A 50 1 20 HELIX 3 AA3 GLU A 58 TYR A 68 1 11 HELIX 4 AA4 CYS A 69 PHE A 78 5 10 HELIX 5 AA5 VAL A 84 LEU A 92 1 9 HELIX 6 AA6 ASP A 93 THR A 113 1 21 LINK N HIS A 0 NI NI A 201 1555 1555 2.11 LINK O HIS A 0 NI NI A 201 1555 1555 2.19 LINK ND1 HIS A 0 NI NI A 201 1555 1555 2.19 LINK NI NI A 201 O HOH A 304 1555 1555 2.23 LINK NI NI A 201 O HOH A 337 1555 5545 2.25 LINK NI NI A 201 O HOH A 404 1555 1555 2.22 SITE 1 AC1 4 HIS A 0 HOH A 304 HOH A 337 HOH A 404 CRYST1 42.835 42.835 147.950 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023345 0.000000 0.000000 0.00000 SCALE2 0.000000 0.023345 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006759 0.00000