data_6CCG # _entry.id 6CCG # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 6CCG pdb_00006ccg 10.2210/pdb6ccg/pdb WWPDB D_1000232535 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2018-05-09 2 'Structure model' 1 1 2019-05-22 3 'Structure model' 1 2 2019-09-04 4 'Structure model' 1 3 2024-03-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 4 'Structure model' 'Data collection' 6 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' citation 4 4 'Structure model' chem_comp_atom 5 4 'Structure model' chem_comp_bond 6 4 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_CSD' 4 2 'Structure model' '_citation.journal_id_ISSN' 5 2 'Structure model' '_citation.pdbx_database_id_DOI' 6 2 'Structure model' '_citation.pdbx_database_id_PubMed' 7 2 'Structure model' '_citation.title' 8 2 'Structure model' '_citation.year' 9 2 'Structure model' '_citation_author.name' 10 3 'Structure model' '_citation.journal_volume' 11 3 'Structure model' '_citation.page_first' 12 3 'Structure model' '_citation.page_last' 13 4 'Structure model' '_database_2.pdbx_DOI' 14 4 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 6CCG _pdbx_database_status.recvd_initial_deposition_date 2018-02-07 _pdbx_database_status.SG_entry Y _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Liu, K.' 1 ? 'Tempel, W.' 2 ? 'Bountra, C.' 3 ? 'Arrowsmith, C.H.' 4 ? 'Edwards, A.M.' 5 ? 'Min, J.' 6 ? 'Structural Genomics Consortium (SGC)' 7 ? # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Febs J.' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1742-464X _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 286 _citation.language ? _citation.page_first 3240 _citation.page_last 3254 _citation.title 'Structural analyses reveal that MBD3 is a methylated CG binder.' _citation.year 2019 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1111/febs.14850 _citation.pdbx_database_id_PubMed 30980593 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Liu, K.' 1 ? primary 'Lei, M.' 2 ? primary 'Wu, Z.' 3 ? primary 'Gan, B.' 4 ? primary 'Cheng, H.' 5 ? primary 'Li, Y.' 6 ? primary 'Min, J.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Methyl-CpG-binding domain protein 3' 8473.716 2 ? ? 'residues 1-71' ? 2 polymer syn DNA 3678.407 4 ? ? ? ? 3 non-polymer syn 'UNKNOWN ATOM OR ION' ? 10 ? ? ? ? 4 water nat water 18.015 88 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Methyl-CpG-binding protein MBD3' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no GSMERKRWECPALPQGWEREEVPRRSGLSAGHRDVFYYSPSGKKFRSKPQLARYLGGSMDLSTFDFRTGKMLM GSMERKRWECPALPQGWEREEVPRRSGLSAGHRDVFYYSPSGKKFRSKPQLARYLGGSMDLSTFDFRTGKMLM A,B ? 2 polydeoxyribonucleotide no yes '(DG)(DC)(DC)(DA)(DG)(5CM)(DG)(DC)(DT)(DG)(DG)(DC)' GCCAGCGCTGGC C,D,E,F ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'UNKNOWN ATOM OR ION' UNX 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 MET n 1 4 GLU n 1 5 ARG n 1 6 LYS n 1 7 ARG n 1 8 TRP n 1 9 GLU n 1 10 CYS n 1 11 PRO n 1 12 ALA n 1 13 LEU n 1 14 PRO n 1 15 GLN n 1 16 GLY n 1 17 TRP n 1 18 GLU n 1 19 ARG n 1 20 GLU n 1 21 GLU n 1 22 VAL n 1 23 PRO n 1 24 ARG n 1 25 ARG n 1 26 SER n 1 27 GLY n 1 28 LEU n 1 29 SER n 1 30 ALA n 1 31 GLY n 1 32 HIS n 1 33 ARG n 1 34 ASP n 1 35 VAL n 1 36 PHE n 1 37 TYR n 1 38 TYR n 1 39 SER n 1 40 PRO n 1 41 SER n 1 42 GLY n 1 43 LYS n 1 44 LYS n 1 45 PHE n 1 46 ARG n 1 47 SER n 1 48 LYS n 1 49 PRO n 1 50 GLN n 1 51 LEU n 1 52 ALA n 1 53 ARG n 1 54 TYR n 1 55 LEU n 1 56 GLY n 1 57 GLY n 1 58 SER n 1 59 MET n 1 60 ASP n 1 61 LEU n 1 62 SER n 1 63 THR n 1 64 PHE n 1 65 ASP n 1 66 PHE n 1 67 ARG n 1 68 THR n 1 69 GLY n 1 70 LYS n 1 71 MET n 1 72 LEU n 1 73 MET n 2 1 DG n 2 2 DC n 2 3 DC n 2 4 DA n 2 5 DG n 2 6 5CM n 2 7 DG n 2 8 DC n 2 9 DT n 2 10 DG n 2 11 DG n 2 12 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 73 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene MBD3 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21-V2R-pRARE2 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET28-GSTLIC _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 12 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details 'synthetic DNA construct' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 5CM 'DNA linking' n "5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE" ? 'C10 H16 N3 O7 P' 321.224 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNX non-polymer . 'UNKNOWN ATOM OR ION' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 ? ? ? A . n A 1 2 SER 2 0 0 SER SER A . n A 1 3 MET 3 1 1 MET MET A . n A 1 4 GLU 4 2 2 GLU GLU A . n A 1 5 ARG 5 3 3 ARG ARG A . n A 1 6 LYS 6 4 4 LYS LYS A . n A 1 7 ARG 7 5 5 ARG ARG A . n A 1 8 TRP 8 6 6 TRP TRP A . n A 1 9 GLU 9 7 7 GLU GLU A . n A 1 10 CYS 10 8 8 CYS CYS A . n A 1 11 PRO 11 9 9 PRO PRO A . n A 1 12 ALA 12 10 10 ALA ALA A . n A 1 13 LEU 13 11 11 LEU LEU A . n A 1 14 PRO 14 12 12 PRO PRO A . n A 1 15 GLN 15 13 13 GLN GLN A . n A 1 16 GLY 16 14 14 GLY GLY A . n A 1 17 TRP 17 15 15 TRP TRP A . n A 1 18 GLU 18 16 16 GLU GLU A . n A 1 19 ARG 19 17 17 ARG ARG A . n A 1 20 GLU 20 18 18 GLU GLU A . n A 1 21 GLU 21 19 19 GLU GLU A . n A 1 22 VAL 22 20 20 VAL VAL A . n A 1 23 PRO 23 21 21 PRO PRO A . n A 1 24 ARG 24 22 22 ARG ARG A . n A 1 25 ARG 25 23 23 ARG ARG A . n A 1 26 SER 26 24 24 SER SER A . n A 1 27 GLY 27 25 25 GLY GLY A . n A 1 28 LEU 28 26 26 LEU LEU A . n A 1 29 SER 29 27 27 SER SER A . n A 1 30 ALA 30 28 28 ALA ALA A . n A 1 31 GLY 31 29 29 GLY GLY A . n A 1 32 HIS 32 30 30 HIS HIS A . n A 1 33 ARG 33 31 31 ARG ARG A . n A 1 34 ASP 34 32 32 ASP ASP A . n A 1 35 VAL 35 33 33 VAL VAL A . n A 1 36 PHE 36 34 34 PHE PHE A . n A 1 37 TYR 37 35 35 TYR TYR A . n A 1 38 TYR 38 36 36 TYR TYR A . n A 1 39 SER 39 37 37 SER SER A . n A 1 40 PRO 40 38 38 PRO PRO A . n A 1 41 SER 41 39 39 SER SER A . n A 1 42 GLY 42 40 40 GLY GLY A . n A 1 43 LYS 43 41 41 LYS LYS A . n A 1 44 LYS 44 42 42 LYS LYS A . n A 1 45 PHE 45 43 43 PHE PHE A . n A 1 46 ARG 46 44 44 ARG ARG A . n A 1 47 SER 47 45 45 SER SER A . n A 1 48 LYS 48 46 46 LYS LYS A . n A 1 49 PRO 49 47 47 PRO PRO A . n A 1 50 GLN 50 48 48 GLN GLN A . n A 1 51 LEU 51 49 49 LEU LEU A . n A 1 52 ALA 52 50 50 ALA ALA A . n A 1 53 ARG 53 51 51 ARG ARG A . n A 1 54 TYR 54 52 52 TYR TYR A . n A 1 55 LEU 55 53 53 LEU LEU A . n A 1 56 GLY 56 54 54 GLY GLY A . n A 1 57 GLY 57 55 55 GLY GLY A . n A 1 58 SER 58 56 56 SER SER A . n A 1 59 MET 59 57 57 MET MET A . n A 1 60 ASP 60 58 58 ASP ASP A . n A 1 61 LEU 61 59 59 LEU LEU A . n A 1 62 SER 62 60 60 SER SER A . n A 1 63 THR 63 61 61 THR THR A . n A 1 64 PHE 64 62 62 PHE PHE A . n A 1 65 ASP 65 63 63 ASP ASP A . n A 1 66 PHE 66 64 64 PHE PHE A . n A 1 67 ARG 67 65 65 ARG ARG A . n A 1 68 THR 68 66 66 THR THR A . n A 1 69 GLY 69 67 67 GLY GLY A . n A 1 70 LYS 70 68 68 LYS LYS A . n A 1 71 MET 71 69 69 MET MET A . n A 1 72 LEU 72 70 70 LEU LEU A . n A 1 73 MET 73 71 71 MET MET A . n B 1 1 GLY 1 -1 ? ? ? B . n B 1 2 SER 2 0 ? ? ? B . n B 1 3 MET 3 1 1 MET MET B . n B 1 4 GLU 4 2 2 GLU GLU B . n B 1 5 ARG 5 3 3 ARG ARG B . n B 1 6 LYS 6 4 4 LYS LYS B . n B 1 7 ARG 7 5 5 ARG ARG B . n B 1 8 TRP 8 6 6 TRP TRP B . n B 1 9 GLU 9 7 7 GLU GLU B . n B 1 10 CYS 10 8 8 CYS CYS B . n B 1 11 PRO 11 9 9 PRO PRO B . n B 1 12 ALA 12 10 10 ALA ALA B . n B 1 13 LEU 13 11 11 LEU LEU B . n B 1 14 PRO 14 12 12 PRO PRO B . n B 1 15 GLN 15 13 13 GLN GLN B . n B 1 16 GLY 16 14 14 GLY GLY B . n B 1 17 TRP 17 15 15 TRP TRP B . n B 1 18 GLU 18 16 16 GLU GLU B . n B 1 19 ARG 19 17 17 ARG ARG B . n B 1 20 GLU 20 18 18 GLU GLU B . n B 1 21 GLU 21 19 19 GLU GLU B . n B 1 22 VAL 22 20 20 VAL VAL B . n B 1 23 PRO 23 21 21 PRO PRO B . n B 1 24 ARG 24 22 22 ARG ARG B . n B 1 25 ARG 25 23 23 ARG ARG B . n B 1 26 SER 26 24 24 SER SER B . n B 1 27 GLY 27 25 25 GLY GLY B . n B 1 28 LEU 28 26 26 LEU LEU B . n B 1 29 SER 29 27 27 SER SER B . n B 1 30 ALA 30 28 28 ALA ALA B . n B 1 31 GLY 31 29 29 GLY GLY B . n B 1 32 HIS 32 30 30 HIS HIS B . n B 1 33 ARG 33 31 31 ARG ARG B . n B 1 34 ASP 34 32 32 ASP ASP B . n B 1 35 VAL 35 33 33 VAL VAL B . n B 1 36 PHE 36 34 34 PHE PHE B . n B 1 37 TYR 37 35 35 TYR TYR B . n B 1 38 TYR 38 36 36 TYR TYR B . n B 1 39 SER 39 37 37 SER SER B . n B 1 40 PRO 40 38 38 PRO PRO B . n B 1 41 SER 41 39 39 SER SER B . n B 1 42 GLY 42 40 40 GLY GLY B . n B 1 43 LYS 43 41 41 LYS LYS B . n B 1 44 LYS 44 42 42 LYS LYS B . n B 1 45 PHE 45 43 43 PHE PHE B . n B 1 46 ARG 46 44 44 ARG ARG B . n B 1 47 SER 47 45 45 SER SER B . n B 1 48 LYS 48 46 46 LYS LYS B . n B 1 49 PRO 49 47 47 PRO PRO B . n B 1 50 GLN 50 48 48 GLN GLN B . n B 1 51 LEU 51 49 49 LEU LEU B . n B 1 52 ALA 52 50 50 ALA ALA B . n B 1 53 ARG 53 51 51 ARG ARG B . n B 1 54 TYR 54 52 52 TYR TYR B . n B 1 55 LEU 55 53 53 LEU LEU B . n B 1 56 GLY 56 54 54 GLY GLY B . n B 1 57 GLY 57 55 55 GLY GLY B . n B 1 58 SER 58 56 56 SER SER B . n B 1 59 MET 59 57 57 MET MET B . n B 1 60 ASP 60 58 58 ASP ASP B . n B 1 61 LEU 61 59 59 LEU LEU B . n B 1 62 SER 62 60 60 SER SER B . n B 1 63 THR 63 61 61 THR THR B . n B 1 64 PHE 64 62 62 PHE PHE B . n B 1 65 ASP 65 63 63 ASP ASP B . n B 1 66 PHE 66 64 64 PHE PHE B . n B 1 67 ARG 67 65 65 ARG ARG B . n B 1 68 THR 68 66 66 THR THR B . n B 1 69 GLY 69 67 67 GLY GLY B . n B 1 70 LYS 70 68 68 LYS LYS B . n B 1 71 MET 71 69 69 MET MET B . n B 1 72 LEU 72 70 70 LEU LEU B . n B 1 73 MET 73 71 71 MET MET B . n C 2 1 DG 1 1 1 DG DG C . n C 2 2 DC 2 2 2 DC DC C . n C 2 3 DC 3 3 3 DC DC C . n C 2 4 DA 4 4 4 DA DA C . n C 2 5 DG 5 5 5 DG DG C . n C 2 6 5CM 6 6 6 5CM 5CM C . n C 2 7 DG 7 7 7 DG DG C . n C 2 8 DC 8 8 8 DC DC C . n C 2 9 DT 9 9 9 DT DT C . n C 2 10 DG 10 10 10 DG DG C . n C 2 11 DG 11 11 11 DG DG C . n C 2 12 DC 12 12 12 DC DC C . n D 2 1 DG 1 1 1 DG DG D . n D 2 2 DC 2 2 2 DC DC D . n D 2 3 DC 3 3 3 DC DC D . n D 2 4 DA 4 4 4 DA DA D . n D 2 5 DG 5 5 5 DG DG D . n D 2 6 5CM 6 6 6 5CM 5CM D . n D 2 7 DG 7 7 7 DG DG D . n D 2 8 DC 8 8 8 DC DC D . n D 2 9 DT 9 9 9 DT DT D . n D 2 10 DG 10 10 10 DG DG D . n D 2 11 DG 11 11 11 DG DG D . n D 2 12 DC 12 12 12 DC DC D . n E 2 1 DG 1 1 1 DG DG E . n E 2 2 DC 2 2 2 DC DC E . n E 2 3 DC 3 3 3 DC DC E . n E 2 4 DA 4 4 4 DA DA E . n E 2 5 DG 5 5 5 DG DG E . n E 2 6 5CM 6 6 6 5CM 5CM E . n E 2 7 DG 7 7 7 DG DG E . n E 2 8 DC 8 8 8 DC DC E . n E 2 9 DT 9 9 9 DT DT E . n E 2 10 DG 10 10 10 DG DG E . n E 2 11 DG 11 11 11 DG DG E . n E 2 12 DC 12 12 12 DC DC E . n F 2 1 DG 1 1 1 DG DG F . n F 2 2 DC 2 2 2 DC DC F . n F 2 3 DC 3 3 3 DC DC F . n F 2 4 DA 4 4 4 DA DA F . n F 2 5 DG 5 5 5 DG DG F . n F 2 6 5CM 6 6 6 5CM 5CM F . n F 2 7 DG 7 7 7 DG DG F . n F 2 8 DC 8 8 8 DC DC F . n F 2 9 DT 9 9 9 DT DT F . n F 2 10 DG 10 10 10 DG DG F . n F 2 11 DG 11 11 11 DG DG F . n F 2 12 DC 12 12 12 DC DC F . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 UNX 1 101 1 UNX UNX A . H 3 UNX 1 102 4 UNX UNX A . I 3 UNX 1 103 5 UNX UNX A . J 3 UNX 1 104 11 UNX UNX A . K 3 UNX 1 101 2 UNX UNX B . L 3 UNX 1 102 3 UNX UNX B . M 3 UNX 1 101 9 UNX UNX D . N 3 UNX 1 101 6 UNX UNX F . O 3 UNX 1 102 7 UNX UNX F . P 3 UNX 1 103 8 UNX UNX F . Q 4 HOH 1 201 40 HOH HOH A . Q 4 HOH 2 202 37 HOH HOH A . Q 4 HOH 3 203 64 HOH HOH A . Q 4 HOH 4 204 63 HOH HOH A . Q 4 HOH 5 205 67 HOH HOH A . Q 4 HOH 6 206 42 HOH HOH A . Q 4 HOH 7 207 56 HOH HOH A . Q 4 HOH 8 208 41 HOH HOH A . Q 4 HOH 9 209 43 HOH HOH A . Q 4 HOH 10 210 62 HOH HOH A . Q 4 HOH 11 211 46 HOH HOH A . Q 4 HOH 12 212 61 HOH HOH A . Q 4 HOH 13 213 47 HOH HOH A . Q 4 HOH 14 214 86 HOH HOH A . Q 4 HOH 15 215 68 HOH HOH A . Q 4 HOH 16 216 55 HOH HOH A . R 4 HOH 1 201 10 HOH HOH B . R 4 HOH 2 202 21 HOH HOH B . R 4 HOH 3 203 30 HOH HOH B . R 4 HOH 4 204 72 HOH HOH B . R 4 HOH 5 205 88 HOH HOH B . R 4 HOH 6 206 14 HOH HOH B . R 4 HOH 7 207 74 HOH HOH B . R 4 HOH 8 208 75 HOH HOH B . R 4 HOH 9 209 36 HOH HOH B . R 4 HOH 10 210 33 HOH HOH B . R 4 HOH 11 211 29 HOH HOH B . R 4 HOH 12 212 35 HOH HOH B . R 4 HOH 13 213 76 HOH HOH B . R 4 HOH 14 214 70 HOH HOH B . R 4 HOH 15 215 71 HOH HOH B . R 4 HOH 16 216 15 HOH HOH B . R 4 HOH 17 217 2 HOH HOH B . R 4 HOH 18 218 13 HOH HOH B . R 4 HOH 19 219 18 HOH HOH B . R 4 HOH 20 220 34 HOH HOH B . S 4 HOH 1 101 7 HOH HOH C . S 4 HOH 2 102 90 HOH HOH C . S 4 HOH 3 103 54 HOH HOH C . S 4 HOH 4 104 60 HOH HOH C . S 4 HOH 5 105 91 HOH HOH C . S 4 HOH 6 106 89 HOH HOH C . S 4 HOH 7 107 5 HOH HOH C . S 4 HOH 8 108 78 HOH HOH C . S 4 HOH 9 109 38 HOH HOH C . S 4 HOH 10 110 52 HOH HOH C . S 4 HOH 11 111 39 HOH HOH C . S 4 HOH 12 112 53 HOH HOH C . S 4 HOH 13 113 92 HOH HOH C . T 4 HOH 1 201 44 HOH HOH D . T 4 HOH 2 202 80 HOH HOH D . T 4 HOH 3 203 87 HOH HOH D . T 4 HOH 4 204 6 HOH HOH D . T 4 HOH 5 205 48 HOH HOH D . T 4 HOH 6 206 59 HOH HOH D . T 4 HOH 7 207 51 HOH HOH D . T 4 HOH 8 208 50 HOH HOH D . T 4 HOH 9 209 4 HOH HOH D . T 4 HOH 10 210 77 HOH HOH D . T 4 HOH 11 211 79 HOH HOH D . T 4 HOH 12 212 45 HOH HOH D . T 4 HOH 13 213 49 HOH HOH D . U 4 HOH 1 101 24 HOH HOH E . U 4 HOH 2 102 69 HOH HOH E . U 4 HOH 3 103 23 HOH HOH E . U 4 HOH 4 104 81 HOH HOH E . U 4 HOH 5 105 65 HOH HOH E . U 4 HOH 6 106 28 HOH HOH E . U 4 HOH 7 107 94 HOH HOH E . U 4 HOH 8 108 25 HOH HOH E . U 4 HOH 9 109 93 HOH HOH E . U 4 HOH 10 110 26 HOH HOH E . U 4 HOH 11 111 9 HOH HOH E . U 4 HOH 12 112 12 HOH HOH E . U 4 HOH 13 113 85 HOH HOH E . U 4 HOH 14 114 27 HOH HOH E . U 4 HOH 15 115 84 HOH HOH E . U 4 HOH 16 116 83 HOH HOH E . U 4 HOH 17 117 11 HOH HOH E . V 4 HOH 1 201 3 HOH HOH F . V 4 HOH 2 202 19 HOH HOH F . V 4 HOH 3 203 20 HOH HOH F . V 4 HOH 4 204 82 HOH HOH F . V 4 HOH 5 205 1 HOH HOH F . V 4 HOH 6 206 17 HOH HOH F . V 4 HOH 7 207 95 HOH HOH F . V 4 HOH 8 208 32 HOH HOH F . V 4 HOH 9 209 16 HOH HOH F . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A SER 0 ? N ? A SER 2 N 2 1 Y 1 A SER 0 ? CB ? A SER 2 CB 3 1 Y 1 A SER 0 ? OG ? A SER 2 OG 4 1 Y 1 A GLU 2 ? CG ? A GLU 4 CG 5 1 Y 1 A GLU 2 ? CD ? A GLU 4 CD 6 1 Y 1 A GLU 2 ? OE1 ? A GLU 4 OE1 7 1 Y 1 A GLU 2 ? OE2 ? A GLU 4 OE2 8 1 Y 1 A ARG 3 ? NH1 ? A ARG 5 NH1 9 1 Y 1 A ARG 3 ? NH2 ? A ARG 5 NH2 10 1 Y 1 A GLN 13 ? CG ? A GLN 15 CG 11 1 Y 1 A GLN 13 ? CD ? A GLN 15 CD 12 1 Y 1 A GLN 13 ? OE1 ? A GLN 15 OE1 13 1 Y 1 A GLN 13 ? NE2 ? A GLN 15 NE2 14 1 Y 1 A LYS 41 ? NZ ? A LYS 43 NZ 15 1 Y 1 A MET 71 ? SD ? A MET 73 SD 16 1 Y 1 A MET 71 ? CE ? A MET 73 CE 17 1 Y 1 B GLU 2 ? CG ? B GLU 4 CG 18 1 Y 1 B GLU 2 ? CD ? B GLU 4 CD 19 1 Y 1 B GLU 2 ? OE1 ? B GLU 4 OE1 20 1 Y 1 B GLU 2 ? OE2 ? B GLU 4 OE2 21 1 Y 1 B GLU 7 ? CG ? B GLU 9 CG 22 1 Y 1 B GLU 7 ? CD ? B GLU 9 CD 23 1 Y 1 B GLU 7 ? OE1 ? B GLU 9 OE1 24 1 Y 1 B GLU 7 ? OE2 ? B GLU 9 OE2 25 1 Y 1 B ARG 23 ? CG ? B ARG 25 CG 26 1 Y 1 B ARG 23 ? CD ? B ARG 25 CD 27 1 Y 1 B ARG 23 ? NE ? B ARG 25 NE 28 1 Y 1 B ARG 23 ? CZ ? B ARG 25 CZ 29 1 Y 1 B ARG 23 ? NH1 ? B ARG 25 NH1 30 1 Y 1 B ARG 23 ? NH2 ? B ARG 25 NH2 # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.8.0189 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.5.27 2 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.22 3 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? . 5 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 92.420 _cell.angle_beta_esd ? _cell.angle_gamma 90.000 _cell.angle_gamma_esd ? _cell.entry_id 6CCG _cell.details ? _cell.formula_units_Z ? _cell.length_a 72.270 _cell.length_a_esd ? _cell.length_b 36.460 _cell.length_b_esd ? _cell.length_c 130.840 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 16 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6CCG _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 6CCG _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.8 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 55.1 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '15% PEG 8000,0.2M magnesium chloride, 0.1M Tris' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2012-12-14 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97911 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.97911 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_synchrotron_site APS # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 6CCG _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.900 _reflns.d_resolution_low 35.180 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 27299 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 99.900 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 5.700 _reflns.pdbx_Rmerge_I_obs 0.068 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 16.700 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects 12 _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all 0.074 _reflns.pdbx_Rpim_I_all 0.029 _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all 155271 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half 0.999 _reflns.pdbx_R_split ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 1.900 1.940 ? ? 6491 ? ? 1749 ? 99.800 ? ? ? ? 1.098 ? ? ? ? ? ? ? ? 3.700 ? ? ? 1.200 1.285 0.662 ? 1 1 0.615 ? 9.110 35.180 ? ? 1551 ? ? 272 ? 97.500 ? ? ? ? 0.029 ? ? ? ? ? ? ? ? 5.700 ? ? ? 54.100 0.033 0.014 ? 2 1 0.999 ? # _refine.aniso_B[1][1] -1.1400 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.3300 _refine.aniso_B[2][2] 1.3900 _refine.aniso_B[2][3] -0.0000 _refine.aniso_B[3][3] -0.2800 _refine.B_iso_max 81.670 _refine.B_iso_mean 43.0180 _refine.B_iso_min 26.410 _refine.correlation_coeff_Fo_to_Fc 0.9520 _refine.correlation_coeff_Fo_to_Fc_free 0.9470 _refine.details 'coot was used for interactive model building. Model geometry was assessed on the molprobity server.' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 6CCG _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.9000 _refine.ls_d_res_low 35.1000 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 25763 _refine.ls_number_reflns_R_free 1536 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.8400 _refine.ls_percent_reflns_R_free 5.6000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2247 _refine.ls_R_factor_R_free 0.2501 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2232 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details MASK _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details 'thin shells (sftools)' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.1590 _refine.pdbx_overall_ESU_R_Free 0.1440 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 9.2170 _refine.overall_SU_ML 0.1290 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.cycle_id final _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.d_res_high 1.9000 _refine_hist.d_res_low 35.1000 _refine_hist.pdbx_number_atoms_ligand 10 _refine_hist.number_atoms_solvent 88 _refine_hist.number_atoms_total 2218 _refine_hist.pdbx_number_residues_total 191 _refine_hist.pdbx_B_iso_mean_ligand 41.16 _refine_hist.pdbx_B_iso_mean_solvent 43.70 _refine_hist.pdbx_number_atoms_protein 1144 _refine_hist.pdbx_number_atoms_nucleic_acid 976 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.015 0.016 2322 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 0.004 0.020 1659 ? r_bond_other_d ? ? 'X-RAY DIFFRACTION' ? 1.543 1.633 3348 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 1.190 3.000 3872 ? r_angle_other_deg ? ? 'X-RAY DIFFRACTION' ? 5.368 5.000 147 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 25.590 20.189 53 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 10.306 15.000 212 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 16.751 15.000 18 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.088 0.200 305 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.010 0.021 1921 ? r_gen_planes_refined ? ? 'X-RAY DIFFRACTION' ? 0.002 0.020 533 ? r_gen_planes_other ? ? 'X-RAY DIFFRACTION' ? 1.361 2.425 578 ? r_mcbond_it ? ? 'X-RAY DIFFRACTION' ? 1.362 2.422 577 ? r_mcbond_other ? ? 'X-RAY DIFFRACTION' ? 2.202 3.622 722 ? r_mcangle_it ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.9000 _refine_ls_shell.d_res_low 1.9490 _refine_ls_shell.number_reflns_all 1980 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 102 _refine_ls_shell.number_reflns_R_work 1878 _refine_ls_shell.percent_reflns_obs 99.9000 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3810 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.3180 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 6CCG _struct.title 'Crystal structure MBD3 MBD domain in complex with methylated CpG DNA' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag N # _struct_keywords.entry_id 6CCG _struct_keywords.text 'Structural Genomics Consortium, SGC, TRANSCRIPTION' _struct_keywords.pdbx_keywords TRANSCRIPTION # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 3 ? N N N 3 ? O N N 3 ? P N N 3 ? Q N N 4 ? R N N 4 ? S N N 4 ? T N N 4 ? U N N 4 ? V N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP MBD3_HUMAN O95983 ? 1 MERKRWECPALPQGWEREEVPRRSGLSAGHRDVFYYSPSGKKFRSKPQLARYLGGSMDLSTFDFRTGKMLM 1 2 PDB 6CCG 6CCG ? 2 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 6CCG A 3 ? 73 ? O95983 1 ? 71 ? 1 71 2 1 6CCG B 3 ? 73 ? O95983 1 ? 71 ? 1 71 3 2 6CCG C 1 ? 12 ? 6CCG 1 ? 12 ? 1 12 4 2 6CCG D 1 ? 12 ? 6CCG 1 ? 12 ? 1 12 5 2 6CCG E 1 ? 12 ? 6CCG 1 ? 12 ? 1 12 6 2 6CCG F 1 ? 12 ? 6CCG 1 ? 12 ? 1 12 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 6CCG GLY A 1 ? UNP O95983 ? ? 'expression tag' -1 1 1 6CCG SER A 2 ? UNP O95983 ? ? 'expression tag' 0 2 2 6CCG GLY B 1 ? UNP O95983 ? ? 'expression tag' -1 3 2 6CCG SER B 2 ? UNP O95983 ? ? 'expression tag' 0 4 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA trimeric 3 2 software_defined_assembly PISA trimeric 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3820 ? 1 MORE -8 ? 1 'SSA (A^2)' 7700 ? 2 'ABSA (A^2)' 3840 ? 2 MORE -8 ? 2 'SSA (A^2)' 7830 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,G,H,I,J,M,Q,S,T 2 1 B,E,F,K,L,N,O,P,R,U,V # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support homology _pdbx_struct_assembly_auth_evidence.details 'see PDB entry 2KY8' # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 47 ? GLY A 56 ? SER A 45 GLY A 54 1 ? 10 HELX_P HELX_P2 AA2 SER B 47 ? GLY B 56 ? SER B 45 GLY B 54 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? C DG 5 "O3'" A ? ? 1_555 C 5CM 6 P A ? C DG 5 C 5CM 6 1_555 ? ? ? ? ? ? ? 1.559 ? ? covale2 covale both ? C DG 5 "O3'" B ? ? 1_555 C 5CM 6 P B ? C DG 5 C 5CM 6 1_555 ? ? ? ? ? ? ? 1.610 ? ? covale3 covale both ? C 5CM 6 "O3'" A ? ? 1_555 C DG 7 P ? ? C 5CM 6 C DG 7 1_555 ? ? ? ? ? ? ? 1.597 ? ? covale4 covale both ? C 5CM 6 "O3'" B ? ? 1_555 C DG 7 P ? ? C 5CM 6 C DG 7 1_555 ? ? ? ? ? ? ? 1.584 ? ? covale5 covale both ? D DG 5 "O3'" ? ? ? 1_555 D 5CM 6 P ? ? D DG 5 D 5CM 6 1_555 ? ? ? ? ? ? ? 1.548 ? ? covale6 covale both ? D 5CM 6 "O3'" ? ? ? 1_555 D DG 7 P ? ? D 5CM 6 D DG 7 1_555 ? ? ? ? ? ? ? 1.574 ? ? covale7 covale both ? E DG 5 "O3'" A ? ? 1_555 E 5CM 6 P A ? E DG 5 E 5CM 6 1_555 ? ? ? ? ? ? ? 1.626 ? ? covale8 covale both ? E DG 5 "O3'" B ? ? 1_555 E 5CM 6 P B ? E DG 5 E 5CM 6 1_555 ? ? ? ? ? ? ? 1.573 ? ? covale9 covale both ? E 5CM 6 "O3'" ? ? ? 1_555 E DG 7 P ? ? E 5CM 6 E DG 7 1_555 ? ? ? ? ? ? ? 1.587 ? ? covale10 covale both ? F DG 5 "O3'" ? ? ? 1_555 F 5CM 6 P ? ? F DG 5 F 5CM 6 1_555 ? ? ? ? ? ? ? 1.561 ? ? covale11 covale both ? F 5CM 6 "O3'" ? ? ? 1_555 F DG 7 P ? ? F 5CM 6 F DG 7 1_555 ? ? ? ? ? ? ? 1.580 ? ? hydrog1 hydrog ? ? C DG 1 N1 ? ? ? 1_555 D DC 12 N3 ? ? C DG 1 D DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DG 1 N2 ? ? ? 1_555 D DC 12 O2 ? ? C DG 1 D DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DG 1 O6 ? ? ? 1_555 D DC 12 N4 ? ? C DG 1 D DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DC 2 N3 ? ? ? 1_555 D DG 11 N1 ? ? C DC 2 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DC 2 N4 ? ? ? 1_555 D DG 11 O6 ? ? C DC 2 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DC 2 O2 ? ? ? 1_555 D DG 11 N2 ? ? C DC 2 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DC 3 N3 ? ? ? 1_555 D DG 10 N1 ? ? C DC 3 D DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DC 3 N4 ? ? ? 1_555 D DG 10 O6 ? ? C DC 3 D DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DC 3 O2 ? ? ? 1_555 D DG 10 N2 ? ? C DC 3 D DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DA 4 N1 ? ? ? 1_555 D DT 9 N3 ? ? C DA 4 D DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DA 4 N6 ? ? ? 1_555 D DT 9 O4 ? ? C DA 4 D DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DG 5 N1 ? ? ? 1_555 D DC 8 N3 ? ? C DG 5 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DG 5 N2 ? ? ? 1_555 D DC 8 O2 ? ? C DG 5 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DG 5 O6 ? ? ? 1_555 D DC 8 N4 ? ? C DG 5 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C 5CM 6 N3 ? ? ? 1_555 D DG 7 N1 ? ? C 5CM 6 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C 5CM 6 N4 ? ? ? 1_555 D DG 7 O6 ? ? C 5CM 6 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C 5CM 6 O2 ? ? ? 1_555 D DG 7 N2 ? ? C 5CM 6 D DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DG 7 N1 ? ? ? 1_555 D 5CM 6 N3 ? ? C DG 7 D 5CM 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DG 7 N2 ? ? ? 1_555 D 5CM 6 O2 ? ? C DG 7 D 5CM 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DG 7 O6 ? ? ? 1_555 D 5CM 6 N4 ? ? C DG 7 D 5CM 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DC 8 N3 ? ? ? 1_555 D DG 5 N1 ? ? C DC 8 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DC 8 N4 ? ? ? 1_555 D DG 5 O6 ? ? C DC 8 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DC 8 O2 ? ? ? 1_555 D DG 5 N2 ? ? C DC 8 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DT 9 N3 ? ? ? 1_555 D DA 4 N1 ? ? C DT 9 D DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DT 9 O4 ? ? ? 1_555 D DA 4 N6 ? ? C DT 9 D DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DG 10 N1 ? ? ? 1_555 D DC 3 N3 ? ? C DG 10 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DG 10 N2 ? ? ? 1_555 D DC 3 O2 ? ? C DG 10 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DG 10 O6 ? ? ? 1_555 D DC 3 N4 ? ? C DG 10 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DG 11 N1 ? ? ? 1_555 D DC 2 N3 ? ? C DG 11 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DG 11 N2 ? ? ? 1_555 D DC 2 O2 ? ? C DG 11 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DG 11 O6 ? ? ? 1_555 D DC 2 N4 ? ? C DG 11 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DC 12 N3 ? ? ? 1_555 D DG 1 N1 ? ? C DC 12 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DC 12 N4 ? ? ? 1_555 D DG 1 O6 ? ? C DC 12 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DC 12 O2 ? ? ? 1_555 D DG 1 N2 ? ? C DC 12 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? E DG 1 N1 ? ? ? 1_555 F DC 12 N3 ? ? E DG 1 F DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? E DG 1 N2 ? ? ? 1_555 F DC 12 O2 ? ? E DG 1 F DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? E DG 1 O6 ? ? ? 1_555 F DC 12 N4 ? ? E DG 1 F DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? E DC 2 N3 ? ? ? 1_555 F DG 11 N1 ? ? E DC 2 F DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? E DC 2 N4 ? ? ? 1_555 F DG 11 O6 ? ? E DC 2 F DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? E DC 2 O2 ? ? ? 1_555 F DG 11 N2 ? ? E DC 2 F DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? E DC 3 N3 ? ? ? 1_555 F DG 10 N1 ? ? E DC 3 F DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? E DC 3 N4 ? ? ? 1_555 F DG 10 O6 ? ? E DC 3 F DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? E DC 3 O2 ? ? ? 1_555 F DG 10 N2 ? ? E DC 3 F DG 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? E DA 4 N1 ? ? ? 1_555 F DT 9 N3 ? ? E DA 4 F DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? E DA 4 N6 ? ? ? 1_555 F DT 9 O4 ? ? E DA 4 F DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? E DG 5 N1 ? ? ? 1_555 F DC 8 N3 ? ? E DG 5 F DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? E DG 5 N2 ? ? ? 1_555 F DC 8 O2 ? ? E DG 5 F DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? E DG 5 O6 ? ? ? 1_555 F DC 8 N4 ? ? E DG 5 F DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? E 5CM 6 N3 ? ? ? 1_555 F DG 7 N1 ? ? E 5CM 6 F DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? E 5CM 6 N4 ? ? ? 1_555 F DG 7 O6 ? ? E 5CM 6 F DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? E 5CM 6 O2 ? ? ? 1_555 F DG 7 N2 ? ? E 5CM 6 F DG 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? E DG 7 N1 ? ? ? 1_555 F 5CM 6 N3 ? ? E DG 7 F 5CM 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? E DG 7 N2 ? ? ? 1_555 F 5CM 6 O2 ? ? E DG 7 F 5CM 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? E DG 7 O6 ? ? ? 1_555 F 5CM 6 N4 ? ? E DG 7 F 5CM 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? E DC 8 N3 ? ? ? 1_555 F DG 5 N1 ? ? E DC 8 F DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? E DC 8 N4 ? ? ? 1_555 F DG 5 O6 ? ? E DC 8 F DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? E DC 8 O2 ? ? ? 1_555 F DG 5 N2 ? ? E DC 8 F DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? E DT 9 N3 ? ? ? 1_555 F DA 4 N1 ? ? E DT 9 F DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? E DT 9 O4 ? ? ? 1_555 F DA 4 N6 ? ? E DT 9 F DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? E DG 10 N1 ? ? ? 1_555 F DC 3 N3 ? ? E DG 10 F DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? E DG 10 N2 ? ? ? 1_555 F DC 3 O2 ? ? E DG 10 F DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? E DG 10 O6 ? ? ? 1_555 F DC 3 N4 ? ? E DG 10 F DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? E DG 11 N1 ? ? ? 1_555 F DC 2 N3 ? ? E DG 11 F DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? E DG 11 N2 ? ? ? 1_555 F DC 2 O2 ? ? E DG 11 F DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? E DG 11 O6 ? ? ? 1_555 F DC 2 N4 ? ? E DG 11 F DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? E DC 12 N3 ? ? ? 1_555 F DG 1 N1 ? ? E DC 12 F DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? E DC 12 N4 ? ? ? 1_555 F DG 1 O6 ? ? E DC 12 F DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? E DC 12 O2 ? ? ? 1_555 F DG 1 N2 ? ? E DC 12 F DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 2 ? AA3 ? 4 ? AA4 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA3 3 4 ? anti-parallel AA4 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 LYS A 6 ? GLU A 9 ? LYS A 4 GLU A 7 AA1 2 GLU A 18 ? PRO A 23 ? GLU A 16 PRO A 21 AA1 3 ARG A 33 ? TYR A 38 ? ARG A 31 TYR A 36 AA1 4 LYS A 44 ? PHE A 45 ? LYS A 42 PHE A 43 AA2 1 PHE A 64 ? ASP A 65 ? PHE A 62 ASP A 63 AA2 2 LYS A 70 ? MET A 71 ? LYS A 68 MET A 69 AA3 1 LYS B 6 ? GLU B 9 ? LYS B 4 GLU B 7 AA3 2 GLU B 18 ? PRO B 23 ? GLU B 16 PRO B 21 AA3 3 ARG B 33 ? TYR B 38 ? ARG B 31 TYR B 36 AA3 4 LYS B 44 ? PHE B 45 ? LYS B 42 PHE B 43 AA4 1 PHE B 64 ? ASP B 65 ? PHE B 62 ASP B 63 AA4 2 LYS B 70 ? MET B 71 ? LYS B 68 MET B 69 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N TRP A 8 ? N TRP A 6 O ARG A 19 ? O ARG A 17 AA1 2 3 N GLU A 20 ? N GLU A 18 O PHE A 36 ? O PHE A 34 AA1 3 4 N TYR A 37 ? N TYR A 35 O PHE A 45 ? O PHE A 43 AA2 1 2 N ASP A 65 ? N ASP A 63 O LYS A 70 ? O LYS A 68 AA3 1 2 N TRP B 8 ? N TRP B 6 O ARG B 19 ? O ARG B 17 AA3 2 3 N GLU B 20 ? N GLU B 18 O PHE B 36 ? O PHE B 34 AA3 3 4 N TYR B 37 ? N TYR B 35 O PHE B 45 ? O PHE B 43 AA4 1 2 N ASP B 65 ? N ASP B 63 O LYS B 70 ? O LYS B 68 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id SER _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 56 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -38.70 _pdbx_validate_torsion.psi -37.79 # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -23.1226 -4.6033 54.5264 0.2576 0.1425 0.0152 0.0317 0.0134 0.0066 2.6557 3.6366 4.0551 0.6015 -0.3977 -2.3473 0.0026 0.0396 -0.0421 -0.1839 -0.1634 0.0573 0.0333 0.3074 -0.2993 'X-RAY DIFFRACTION' 2 ? refined -20.3238 6.7182 10.5204 0.2295 0.1279 0.0164 -0.0311 0.0022 -0.0020 2.6219 3.2960 5.0865 -0.7989 0.4391 -2.2057 0.0132 0.0007 -0.0139 0.2102 0.1530 0.0739 -0.1348 -0.2646 -0.2219 'X-RAY DIFFRACTION' 3 ? refined -18.5431 8.3830 46.3019 0.2312 0.1529 0.2028 0.0844 0.0295 -0.0479 4.1799 4.3210 2.1503 -4.1819 0.9748 -0.7407 0.1031 -0.1117 0.0086 0.0417 0.3944 -0.2834 -0.1403 0.0733 0.0835 'X-RAY DIFFRACTION' 4 ? refined -18.6668 7.7648 44.9913 0.2174 0.1841 0.0843 0.0835 0.0683 0.0023 6.1548 2.2912 0.6381 -2.1147 1.3276 0.2322 0.1116 -0.1887 0.0771 0.3847 0.3274 -0.1300 -0.1850 0.0057 0.0257 'X-RAY DIFFRACTION' 5 ? refined -15.8571 -6.2955 19.0526 0.1716 0.1208 0.1220 -0.0611 -0.0376 -0.0522 4.6458 3.1698 1.8201 3.2847 -0.3931 -0.6285 -0.0067 -0.0242 0.0309 0.0720 -0.3844 -0.1687 0.0589 0.0082 0.0477 'X-RAY DIFFRACTION' 6 ? refined -15.9606 -5.6777 20.3715 0.1608 0.1577 0.0926 -0.0808 -0.0555 -0.0111 6.4441 2.7586 1.3685 2.2223 -1.1958 -0.2301 0.0993 -0.1448 0.0456 -0.3761 -0.2477 -0.1035 0.1225 -0.0099 0.0386 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 0 A 80 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 0 B 80 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 C 1 C 12 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 4 4 D 1 D 12 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 5 5 E 1 E 12 ? ? ? ? ? ? 'X-RAY DIFFRACTION' 6 6 F 1 F 12 ? ? ? ? ? ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -1 ? A GLY 1 2 1 Y 1 B GLY -1 ? B GLY 1 3 1 Y 1 B SER 0 ? B SER 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 5CM N1 N N N 1 5CM C2 C N N 2 5CM N3 N N N 3 5CM C4 C N N 4 5CM C5 C N N 5 5CM C5A C N N 6 5CM C6 C N N 7 5CM O2 O N N 8 5CM N4 N N N 9 5CM "C1'" C N R 10 5CM "C2'" C N N 11 5CM "C3'" C N S 12 5CM "C4'" C N R 13 5CM "O4'" O N N 14 5CM "O3'" O N N 15 5CM "C5'" C N N 16 5CM "O5'" O N N 17 5CM P P N N 18 5CM OP1 O N N 19 5CM OP2 O N N 20 5CM OP3 O N N 21 5CM H5A1 H N N 22 5CM H5A2 H N N 23 5CM H5A3 H N N 24 5CM H6 H N N 25 5CM HN41 H N N 26 5CM HN42 H N N 27 5CM "H1'" H N N 28 5CM "H2'" H N N 29 5CM "H2''" H N N 30 5CM "H3'" H N N 31 5CM "H4'" H N N 32 5CM "HO3'" H N N 33 5CM "H5'" H N N 34 5CM "H5''" H N N 35 5CM HOP2 H N N 36 5CM HOP3 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASP N N N N 78 ASP CA C N S 79 ASP C C N N 80 ASP O O N N 81 ASP CB C N N 82 ASP CG C N N 83 ASP OD1 O N N 84 ASP OD2 O N N 85 ASP OXT O N N 86 ASP H H N N 87 ASP H2 H N N 88 ASP HA H N N 89 ASP HB2 H N N 90 ASP HB3 H N N 91 ASP HD2 H N N 92 ASP HXT H N N 93 CYS N N N N 94 CYS CA C N R 95 CYS C C N N 96 CYS O O N N 97 CYS CB C N N 98 CYS SG S N N 99 CYS OXT O N N 100 CYS H H N N 101 CYS H2 H N N 102 CYS HA H N N 103 CYS HB2 H N N 104 CYS HB3 H N N 105 CYS HG H N N 106 CYS HXT H N N 107 DA OP3 O N N 108 DA P P N N 109 DA OP1 O N N 110 DA OP2 O N N 111 DA "O5'" O N N 112 DA "C5'" C N N 113 DA "C4'" C N R 114 DA "O4'" O N N 115 DA "C3'" C N S 116 DA "O3'" O N N 117 DA "C2'" C N N 118 DA "C1'" C N R 119 DA N9 N Y N 120 DA C8 C Y N 121 DA N7 N Y N 122 DA C5 C Y N 123 DA C6 C Y N 124 DA N6 N N N 125 DA N1 N Y N 126 DA C2 C Y N 127 DA N3 N Y N 128 DA C4 C Y N 129 DA HOP3 H N N 130 DA HOP2 H N N 131 DA "H5'" H N N 132 DA "H5''" H N N 133 DA "H4'" H N N 134 DA "H3'" H N N 135 DA "HO3'" H N N 136 DA "H2'" H N N 137 DA "H2''" H N N 138 DA "H1'" H N N 139 DA H8 H N N 140 DA H61 H N N 141 DA H62 H N N 142 DA H2 H N N 143 DC OP3 O N N 144 DC P P N N 145 DC OP1 O N N 146 DC OP2 O N N 147 DC "O5'" O N N 148 DC "C5'" C N N 149 DC "C4'" C N R 150 DC "O4'" O N N 151 DC "C3'" C N S 152 DC "O3'" O N N 153 DC "C2'" C N N 154 DC "C1'" C N R 155 DC N1 N N N 156 DC C2 C N N 157 DC O2 O N N 158 DC N3 N N N 159 DC C4 C N N 160 DC N4 N N N 161 DC C5 C N N 162 DC C6 C N N 163 DC HOP3 H N N 164 DC HOP2 H N N 165 DC "H5'" H N N 166 DC "H5''" H N N 167 DC "H4'" H N N 168 DC "H3'" H N N 169 DC "HO3'" H N N 170 DC "H2'" H N N 171 DC "H2''" H N N 172 DC "H1'" H N N 173 DC H41 H N N 174 DC H42 H N N 175 DC H5 H N N 176 DC H6 H N N 177 DG OP3 O N N 178 DG P P N N 179 DG OP1 O N N 180 DG OP2 O N N 181 DG "O5'" O N N 182 DG "C5'" C N N 183 DG "C4'" C N R 184 DG "O4'" O N N 185 DG "C3'" C N S 186 DG "O3'" O N N 187 DG "C2'" C N N 188 DG "C1'" C N R 189 DG N9 N Y N 190 DG C8 C Y N 191 DG N7 N Y N 192 DG C5 C Y N 193 DG C6 C N N 194 DG O6 O N N 195 DG N1 N N N 196 DG C2 C N N 197 DG N2 N N N 198 DG N3 N N N 199 DG C4 C Y N 200 DG HOP3 H N N 201 DG HOP2 H N N 202 DG "H5'" H N N 203 DG "H5''" H N N 204 DG "H4'" H N N 205 DG "H3'" H N N 206 DG "HO3'" H N N 207 DG "H2'" H N N 208 DG "H2''" H N N 209 DG "H1'" H N N 210 DG H8 H N N 211 DG H1 H N N 212 DG H21 H N N 213 DG H22 H N N 214 DT OP3 O N N 215 DT P P N N 216 DT OP1 O N N 217 DT OP2 O N N 218 DT "O5'" O N N 219 DT "C5'" C N N 220 DT "C4'" C N R 221 DT "O4'" O N N 222 DT "C3'" C N S 223 DT "O3'" O N N 224 DT "C2'" C N N 225 DT "C1'" C N R 226 DT N1 N N N 227 DT C2 C N N 228 DT O2 O N N 229 DT N3 N N N 230 DT C4 C N N 231 DT O4 O N N 232 DT C5 C N N 233 DT C7 C N N 234 DT C6 C N N 235 DT HOP3 H N N 236 DT HOP2 H N N 237 DT "H5'" H N N 238 DT "H5''" H N N 239 DT "H4'" H N N 240 DT "H3'" H N N 241 DT "HO3'" H N N 242 DT "H2'" H N N 243 DT "H2''" H N N 244 DT "H1'" H N N 245 DT H3 H N N 246 DT H71 H N N 247 DT H72 H N N 248 DT H73 H N N 249 DT H6 H N N 250 GLN N N N N 251 GLN CA C N S 252 GLN C C N N 253 GLN O O N N 254 GLN CB C N N 255 GLN CG C N N 256 GLN CD C N N 257 GLN OE1 O N N 258 GLN NE2 N N N 259 GLN OXT O N N 260 GLN H H N N 261 GLN H2 H N N 262 GLN HA H N N 263 GLN HB2 H N N 264 GLN HB3 H N N 265 GLN HG2 H N N 266 GLN HG3 H N N 267 GLN HE21 H N N 268 GLN HE22 H N N 269 GLN HXT H N N 270 GLU N N N N 271 GLU CA C N S 272 GLU C C N N 273 GLU O O N N 274 GLU CB C N N 275 GLU CG C N N 276 GLU CD C N N 277 GLU OE1 O N N 278 GLU OE2 O N N 279 GLU OXT O N N 280 GLU H H N N 281 GLU H2 H N N 282 GLU HA H N N 283 GLU HB2 H N N 284 GLU HB3 H N N 285 GLU HG2 H N N 286 GLU HG3 H N N 287 GLU HE2 H N N 288 GLU HXT H N N 289 GLY N N N N 290 GLY CA C N N 291 GLY C C N N 292 GLY O O N N 293 GLY OXT O N N 294 GLY H H N N 295 GLY H2 H N N 296 GLY HA2 H N N 297 GLY HA3 H N N 298 GLY HXT H N N 299 HIS N N N N 300 HIS CA C N S 301 HIS C C N N 302 HIS O O N N 303 HIS CB C N N 304 HIS CG C Y N 305 HIS ND1 N Y N 306 HIS CD2 C Y N 307 HIS CE1 C Y N 308 HIS NE2 N Y N 309 HIS OXT O N N 310 HIS H H N N 311 HIS H2 H N N 312 HIS HA H N N 313 HIS HB2 H N N 314 HIS HB3 H N N 315 HIS HD1 H N N 316 HIS HD2 H N N 317 HIS HE1 H N N 318 HIS HE2 H N N 319 HIS HXT H N N 320 HOH O O N N 321 HOH H1 H N N 322 HOH H2 H N N 323 LEU N N N N 324 LEU CA C N S 325 LEU C C N N 326 LEU O O N N 327 LEU CB C N N 328 LEU CG C N N 329 LEU CD1 C N N 330 LEU CD2 C N N 331 LEU OXT O N N 332 LEU H H N N 333 LEU H2 H N N 334 LEU HA H N N 335 LEU HB2 H N N 336 LEU HB3 H N N 337 LEU HG H N N 338 LEU HD11 H N N 339 LEU HD12 H N N 340 LEU HD13 H N N 341 LEU HD21 H N N 342 LEU HD22 H N N 343 LEU HD23 H N N 344 LEU HXT H N N 345 LYS N N N N 346 LYS CA C N S 347 LYS C C N N 348 LYS O O N N 349 LYS CB C N N 350 LYS CG C N N 351 LYS CD C N N 352 LYS CE C N N 353 LYS NZ N N N 354 LYS OXT O N N 355 LYS H H N N 356 LYS H2 H N N 357 LYS HA H N N 358 LYS HB2 H N N 359 LYS HB3 H N N 360 LYS HG2 H N N 361 LYS HG3 H N N 362 LYS HD2 H N N 363 LYS HD3 H N N 364 LYS HE2 H N N 365 LYS HE3 H N N 366 LYS HZ1 H N N 367 LYS HZ2 H N N 368 LYS HZ3 H N N 369 LYS HXT H N N 370 MET N N N N 371 MET CA C N S 372 MET C C N N 373 MET O O N N 374 MET CB C N N 375 MET CG C N N 376 MET SD S N N 377 MET CE C N N 378 MET OXT O N N 379 MET H H N N 380 MET H2 H N N 381 MET HA H N N 382 MET HB2 H N N 383 MET HB3 H N N 384 MET HG2 H N N 385 MET HG3 H N N 386 MET HE1 H N N 387 MET HE2 H N N 388 MET HE3 H N N 389 MET HXT H N N 390 PHE N N N N 391 PHE CA C N S 392 PHE C C N N 393 PHE O O N N 394 PHE CB C N N 395 PHE CG C Y N 396 PHE CD1 C Y N 397 PHE CD2 C Y N 398 PHE CE1 C Y N 399 PHE CE2 C Y N 400 PHE CZ C Y N 401 PHE OXT O N N 402 PHE H H N N 403 PHE H2 H N N 404 PHE HA H N N 405 PHE HB2 H N N 406 PHE HB3 H N N 407 PHE HD1 H N N 408 PHE HD2 H N N 409 PHE HE1 H N N 410 PHE HE2 H N N 411 PHE HZ H N N 412 PHE HXT H N N 413 PRO N N N N 414 PRO CA C N S 415 PRO C C N N 416 PRO O O N N 417 PRO CB C N N 418 PRO CG C N N 419 PRO CD C N N 420 PRO OXT O N N 421 PRO H H N N 422 PRO HA H N N 423 PRO HB2 H N N 424 PRO HB3 H N N 425 PRO HG2 H N N 426 PRO HG3 H N N 427 PRO HD2 H N N 428 PRO HD3 H N N 429 PRO HXT H N N 430 SER N N N N 431 SER CA C N S 432 SER C C N N 433 SER O O N N 434 SER CB C N N 435 SER OG O N N 436 SER OXT O N N 437 SER H H N N 438 SER H2 H N N 439 SER HA H N N 440 SER HB2 H N N 441 SER HB3 H N N 442 SER HG H N N 443 SER HXT H N N 444 THR N N N N 445 THR CA C N S 446 THR C C N N 447 THR O O N N 448 THR CB C N R 449 THR OG1 O N N 450 THR CG2 C N N 451 THR OXT O N N 452 THR H H N N 453 THR H2 H N N 454 THR HA H N N 455 THR HB H N N 456 THR HG1 H N N 457 THR HG21 H N N 458 THR HG22 H N N 459 THR HG23 H N N 460 THR HXT H N N 461 TRP N N N N 462 TRP CA C N S 463 TRP C C N N 464 TRP O O N N 465 TRP CB C N N 466 TRP CG C Y N 467 TRP CD1 C Y N 468 TRP CD2 C Y N 469 TRP NE1 N Y N 470 TRP CE2 C Y N 471 TRP CE3 C Y N 472 TRP CZ2 C Y N 473 TRP CZ3 C Y N 474 TRP CH2 C Y N 475 TRP OXT O N N 476 TRP H H N N 477 TRP H2 H N N 478 TRP HA H N N 479 TRP HB2 H N N 480 TRP HB3 H N N 481 TRP HD1 H N N 482 TRP HE1 H N N 483 TRP HE3 H N N 484 TRP HZ2 H N N 485 TRP HZ3 H N N 486 TRP HH2 H N N 487 TRP HXT H N N 488 TYR N N N N 489 TYR CA C N S 490 TYR C C N N 491 TYR O O N N 492 TYR CB C N N 493 TYR CG C Y N 494 TYR CD1 C Y N 495 TYR CD2 C Y N 496 TYR CE1 C Y N 497 TYR CE2 C Y N 498 TYR CZ C Y N 499 TYR OH O N N 500 TYR OXT O N N 501 TYR H H N N 502 TYR H2 H N N 503 TYR HA H N N 504 TYR HB2 H N N 505 TYR HB3 H N N 506 TYR HD1 H N N 507 TYR HD2 H N N 508 TYR HE1 H N N 509 TYR HE2 H N N 510 TYR HH H N N 511 TYR HXT H N N 512 VAL N N N N 513 VAL CA C N S 514 VAL C C N N 515 VAL O O N N 516 VAL CB C N N 517 VAL CG1 C N N 518 VAL CG2 C N N 519 VAL OXT O N N 520 VAL H H N N 521 VAL H2 H N N 522 VAL HA H N N 523 VAL HB H N N 524 VAL HG11 H N N 525 VAL HG12 H N N 526 VAL HG13 H N N 527 VAL HG21 H N N 528 VAL HG22 H N N 529 VAL HG23 H N N 530 VAL HXT H N N 531 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 5CM N1 C2 sing N N 1 5CM N1 C6 sing N N 2 5CM N1 "C1'" sing N N 3 5CM C2 N3 sing N N 4 5CM C2 O2 doub N N 5 5CM N3 C4 doub N N 6 5CM C4 C5 sing N N 7 5CM C4 N4 sing N N 8 5CM C5 C5A sing N N 9 5CM C5 C6 doub N N 10 5CM C5A H5A1 sing N N 11 5CM C5A H5A2 sing N N 12 5CM C5A H5A3 sing N N 13 5CM C6 H6 sing N N 14 5CM N4 HN41 sing N N 15 5CM N4 HN42 sing N N 16 5CM "C1'" "C2'" sing N N 17 5CM "C1'" "O4'" sing N N 18 5CM "C1'" "H1'" sing N N 19 5CM "C2'" "C3'" sing N N 20 5CM "C2'" "H2'" sing N N 21 5CM "C2'" "H2''" sing N N 22 5CM "C3'" "C4'" sing N N 23 5CM "C3'" "O3'" sing N N 24 5CM "C3'" "H3'" sing N N 25 5CM "C4'" "O4'" sing N N 26 5CM "C4'" "C5'" sing N N 27 5CM "C4'" "H4'" sing N N 28 5CM "O3'" "HO3'" sing N N 29 5CM "C5'" "O5'" sing N N 30 5CM "C5'" "H5'" sing N N 31 5CM "C5'" "H5''" sing N N 32 5CM "O5'" P sing N N 33 5CM P OP1 doub N N 34 5CM P OP2 sing N N 35 5CM P OP3 sing N N 36 5CM OP2 HOP2 sing N N 37 5CM OP3 HOP3 sing N N 38 ALA N CA sing N N 39 ALA N H sing N N 40 ALA N H2 sing N N 41 ALA CA C sing N N 42 ALA CA CB sing N N 43 ALA CA HA sing N N 44 ALA C O doub N N 45 ALA C OXT sing N N 46 ALA CB HB1 sing N N 47 ALA CB HB2 sing N N 48 ALA CB HB3 sing N N 49 ALA OXT HXT sing N N 50 ARG N CA sing N N 51 ARG N H sing N N 52 ARG N H2 sing N N 53 ARG CA C sing N N 54 ARG CA CB sing N N 55 ARG CA HA sing N N 56 ARG C O doub N N 57 ARG C OXT sing N N 58 ARG CB CG sing N N 59 ARG CB HB2 sing N N 60 ARG CB HB3 sing N N 61 ARG CG CD sing N N 62 ARG CG HG2 sing N N 63 ARG CG HG3 sing N N 64 ARG CD NE sing N N 65 ARG CD HD2 sing N N 66 ARG CD HD3 sing N N 67 ARG NE CZ sing N N 68 ARG NE HE sing N N 69 ARG CZ NH1 sing N N 70 ARG CZ NH2 doub N N 71 ARG NH1 HH11 sing N N 72 ARG NH1 HH12 sing N N 73 ARG NH2 HH21 sing N N 74 ARG NH2 HH22 sing N N 75 ARG OXT HXT sing N N 76 ASP N CA sing N N 77 ASP N H sing N N 78 ASP N H2 sing N N 79 ASP CA C sing N N 80 ASP CA CB sing N N 81 ASP CA HA sing N N 82 ASP C O doub N N 83 ASP C OXT sing N N 84 ASP CB CG sing N N 85 ASP CB HB2 sing N N 86 ASP CB HB3 sing N N 87 ASP CG OD1 doub N N 88 ASP CG OD2 sing N N 89 ASP OD2 HD2 sing N N 90 ASP OXT HXT sing N N 91 CYS N CA sing N N 92 CYS N H sing N N 93 CYS N H2 sing N N 94 CYS CA C sing N N 95 CYS CA CB sing N N 96 CYS CA HA sing N N 97 CYS C O doub N N 98 CYS C OXT sing N N 99 CYS CB SG sing N N 100 CYS CB HB2 sing N N 101 CYS CB HB3 sing N N 102 CYS SG HG sing N N 103 CYS OXT HXT sing N N 104 DA OP3 P sing N N 105 DA OP3 HOP3 sing N N 106 DA P OP1 doub N N 107 DA P OP2 sing N N 108 DA P "O5'" sing N N 109 DA OP2 HOP2 sing N N 110 DA "O5'" "C5'" sing N N 111 DA "C5'" "C4'" sing N N 112 DA "C5'" "H5'" sing N N 113 DA "C5'" "H5''" sing N N 114 DA "C4'" "O4'" sing N N 115 DA "C4'" "C3'" sing N N 116 DA "C4'" "H4'" sing N N 117 DA "O4'" "C1'" sing N N 118 DA "C3'" "O3'" sing N N 119 DA "C3'" "C2'" sing N N 120 DA "C3'" "H3'" sing N N 121 DA "O3'" "HO3'" sing N N 122 DA "C2'" "C1'" sing N N 123 DA "C2'" "H2'" sing N N 124 DA "C2'" "H2''" sing N N 125 DA "C1'" N9 sing N N 126 DA "C1'" "H1'" sing N N 127 DA N9 C8 sing Y N 128 DA N9 C4 sing Y N 129 DA C8 N7 doub Y N 130 DA C8 H8 sing N N 131 DA N7 C5 sing Y N 132 DA C5 C6 sing Y N 133 DA C5 C4 doub Y N 134 DA C6 N6 sing N N 135 DA C6 N1 doub Y N 136 DA N6 H61 sing N N 137 DA N6 H62 sing N N 138 DA N1 C2 sing Y N 139 DA C2 N3 doub Y N 140 DA C2 H2 sing N N 141 DA N3 C4 sing Y N 142 DC OP3 P sing N N 143 DC OP3 HOP3 sing N N 144 DC P OP1 doub N N 145 DC P OP2 sing N N 146 DC P "O5'" sing N N 147 DC OP2 HOP2 sing N N 148 DC "O5'" "C5'" sing N N 149 DC "C5'" "C4'" sing N N 150 DC "C5'" "H5'" sing N N 151 DC "C5'" "H5''" sing N N 152 DC "C4'" "O4'" sing N N 153 DC "C4'" "C3'" sing N N 154 DC "C4'" "H4'" sing N N 155 DC "O4'" "C1'" sing N N 156 DC "C3'" "O3'" sing N N 157 DC "C3'" "C2'" sing N N 158 DC "C3'" "H3'" sing N N 159 DC "O3'" "HO3'" sing N N 160 DC "C2'" "C1'" sing N N 161 DC "C2'" "H2'" sing N N 162 DC "C2'" "H2''" sing N N 163 DC "C1'" N1 sing N N 164 DC "C1'" "H1'" sing N N 165 DC N1 C2 sing N N 166 DC N1 C6 sing N N 167 DC C2 O2 doub N N 168 DC C2 N3 sing N N 169 DC N3 C4 doub N N 170 DC C4 N4 sing N N 171 DC C4 C5 sing N N 172 DC N4 H41 sing N N 173 DC N4 H42 sing N N 174 DC C5 C6 doub N N 175 DC C5 H5 sing N N 176 DC C6 H6 sing N N 177 DG OP3 P sing N N 178 DG OP3 HOP3 sing N N 179 DG P OP1 doub N N 180 DG P OP2 sing N N 181 DG P "O5'" sing N N 182 DG OP2 HOP2 sing N N 183 DG "O5'" "C5'" sing N N 184 DG "C5'" "C4'" sing N N 185 DG "C5'" "H5'" sing N N 186 DG "C5'" "H5''" sing N N 187 DG "C4'" "O4'" sing N N 188 DG "C4'" "C3'" sing N N 189 DG "C4'" "H4'" sing N N 190 DG "O4'" "C1'" sing N N 191 DG "C3'" "O3'" sing N N 192 DG "C3'" "C2'" sing N N 193 DG "C3'" "H3'" sing N N 194 DG "O3'" "HO3'" sing N N 195 DG "C2'" "C1'" sing N N 196 DG "C2'" "H2'" sing N N 197 DG "C2'" "H2''" sing N N 198 DG "C1'" N9 sing N N 199 DG "C1'" "H1'" sing N N 200 DG N9 C8 sing Y N 201 DG N9 C4 sing Y N 202 DG C8 N7 doub Y N 203 DG C8 H8 sing N N 204 DG N7 C5 sing Y N 205 DG C5 C6 sing N N 206 DG C5 C4 doub Y N 207 DG C6 O6 doub N N 208 DG C6 N1 sing N N 209 DG N1 C2 sing N N 210 DG N1 H1 sing N N 211 DG C2 N2 sing N N 212 DG C2 N3 doub N N 213 DG N2 H21 sing N N 214 DG N2 H22 sing N N 215 DG N3 C4 sing N N 216 DT OP3 P sing N N 217 DT OP3 HOP3 sing N N 218 DT P OP1 doub N N 219 DT P OP2 sing N N 220 DT P "O5'" sing N N 221 DT OP2 HOP2 sing N N 222 DT "O5'" "C5'" sing N N 223 DT "C5'" "C4'" sing N N 224 DT "C5'" "H5'" sing N N 225 DT "C5'" "H5''" sing N N 226 DT "C4'" "O4'" sing N N 227 DT "C4'" "C3'" sing N N 228 DT "C4'" "H4'" sing N N 229 DT "O4'" "C1'" sing N N 230 DT "C3'" "O3'" sing N N 231 DT "C3'" "C2'" sing N N 232 DT "C3'" "H3'" sing N N 233 DT "O3'" "HO3'" sing N N 234 DT "C2'" "C1'" sing N N 235 DT "C2'" "H2'" sing N N 236 DT "C2'" "H2''" sing N N 237 DT "C1'" N1 sing N N 238 DT "C1'" "H1'" sing N N 239 DT N1 C2 sing N N 240 DT N1 C6 sing N N 241 DT C2 O2 doub N N 242 DT C2 N3 sing N N 243 DT N3 C4 sing N N 244 DT N3 H3 sing N N 245 DT C4 O4 doub N N 246 DT C4 C5 sing N N 247 DT C5 C7 sing N N 248 DT C5 C6 doub N N 249 DT C7 H71 sing N N 250 DT C7 H72 sing N N 251 DT C7 H73 sing N N 252 DT C6 H6 sing N N 253 GLN N CA sing N N 254 GLN N H sing N N 255 GLN N H2 sing N N 256 GLN CA C sing N N 257 GLN CA CB sing N N 258 GLN CA HA sing N N 259 GLN C O doub N N 260 GLN C OXT sing N N 261 GLN CB CG sing N N 262 GLN CB HB2 sing N N 263 GLN CB HB3 sing N N 264 GLN CG CD sing N N 265 GLN CG HG2 sing N N 266 GLN CG HG3 sing N N 267 GLN CD OE1 doub N N 268 GLN CD NE2 sing N N 269 GLN NE2 HE21 sing N N 270 GLN NE2 HE22 sing N N 271 GLN OXT HXT sing N N 272 GLU N CA sing N N 273 GLU N H sing N N 274 GLU N H2 sing N N 275 GLU CA C sing N N 276 GLU CA CB sing N N 277 GLU CA HA sing N N 278 GLU C O doub N N 279 GLU C OXT sing N N 280 GLU CB CG sing N N 281 GLU CB HB2 sing N N 282 GLU CB HB3 sing N N 283 GLU CG CD sing N N 284 GLU CG HG2 sing N N 285 GLU CG HG3 sing N N 286 GLU CD OE1 doub N N 287 GLU CD OE2 sing N N 288 GLU OE2 HE2 sing N N 289 GLU OXT HXT sing N N 290 GLY N CA sing N N 291 GLY N H sing N N 292 GLY N H2 sing N N 293 GLY CA C sing N N 294 GLY CA HA2 sing N N 295 GLY CA HA3 sing N N 296 GLY C O doub N N 297 GLY C OXT sing N N 298 GLY OXT HXT sing N N 299 HIS N CA sing N N 300 HIS N H sing N N 301 HIS N H2 sing N N 302 HIS CA C sing N N 303 HIS CA CB sing N N 304 HIS CA HA sing N N 305 HIS C O doub N N 306 HIS C OXT sing N N 307 HIS CB CG sing N N 308 HIS CB HB2 sing N N 309 HIS CB HB3 sing N N 310 HIS CG ND1 sing Y N 311 HIS CG CD2 doub Y N 312 HIS ND1 CE1 doub Y N 313 HIS ND1 HD1 sing N N 314 HIS CD2 NE2 sing Y N 315 HIS CD2 HD2 sing N N 316 HIS CE1 NE2 sing Y N 317 HIS CE1 HE1 sing N N 318 HIS NE2 HE2 sing N N 319 HIS OXT HXT sing N N 320 HOH O H1 sing N N 321 HOH O H2 sing N N 322 LEU N CA sing N N 323 LEU N H sing N N 324 LEU N H2 sing N N 325 LEU CA C sing N N 326 LEU CA CB sing N N 327 LEU CA HA sing N N 328 LEU C O doub N N 329 LEU C OXT sing N N 330 LEU CB CG sing N N 331 LEU CB HB2 sing N N 332 LEU CB HB3 sing N N 333 LEU CG CD1 sing N N 334 LEU CG CD2 sing N N 335 LEU CG HG sing N N 336 LEU CD1 HD11 sing N N 337 LEU CD1 HD12 sing N N 338 LEU CD1 HD13 sing N N 339 LEU CD2 HD21 sing N N 340 LEU CD2 HD22 sing N N 341 LEU CD2 HD23 sing N N 342 LEU OXT HXT sing N N 343 LYS N CA sing N N 344 LYS N H sing N N 345 LYS N H2 sing N N 346 LYS CA C sing N N 347 LYS CA CB sing N N 348 LYS CA HA sing N N 349 LYS C O doub N N 350 LYS C OXT sing N N 351 LYS CB CG sing N N 352 LYS CB HB2 sing N N 353 LYS CB HB3 sing N N 354 LYS CG CD sing N N 355 LYS CG HG2 sing N N 356 LYS CG HG3 sing N N 357 LYS CD CE sing N N 358 LYS CD HD2 sing N N 359 LYS CD HD3 sing N N 360 LYS CE NZ sing N N 361 LYS CE HE2 sing N N 362 LYS CE HE3 sing N N 363 LYS NZ HZ1 sing N N 364 LYS NZ HZ2 sing N N 365 LYS NZ HZ3 sing N N 366 LYS OXT HXT sing N N 367 MET N CA sing N N 368 MET N H sing N N 369 MET N H2 sing N N 370 MET CA C sing N N 371 MET CA CB sing N N 372 MET CA HA sing N N 373 MET C O doub N N 374 MET C OXT sing N N 375 MET CB CG sing N N 376 MET CB HB2 sing N N 377 MET CB HB3 sing N N 378 MET CG SD sing N N 379 MET CG HG2 sing N N 380 MET CG HG3 sing N N 381 MET SD CE sing N N 382 MET CE HE1 sing N N 383 MET CE HE2 sing N N 384 MET CE HE3 sing N N 385 MET OXT HXT sing N N 386 PHE N CA sing N N 387 PHE N H sing N N 388 PHE N H2 sing N N 389 PHE CA C sing N N 390 PHE CA CB sing N N 391 PHE CA HA sing N N 392 PHE C O doub N N 393 PHE C OXT sing N N 394 PHE CB CG sing N N 395 PHE CB HB2 sing N N 396 PHE CB HB3 sing N N 397 PHE CG CD1 doub Y N 398 PHE CG CD2 sing Y N 399 PHE CD1 CE1 sing Y N 400 PHE CD1 HD1 sing N N 401 PHE CD2 CE2 doub Y N 402 PHE CD2 HD2 sing N N 403 PHE CE1 CZ doub Y N 404 PHE CE1 HE1 sing N N 405 PHE CE2 CZ sing Y N 406 PHE CE2 HE2 sing N N 407 PHE CZ HZ sing N N 408 PHE OXT HXT sing N N 409 PRO N CA sing N N 410 PRO N CD sing N N 411 PRO N H sing N N 412 PRO CA C sing N N 413 PRO CA CB sing N N 414 PRO CA HA sing N N 415 PRO C O doub N N 416 PRO C OXT sing N N 417 PRO CB CG sing N N 418 PRO CB HB2 sing N N 419 PRO CB HB3 sing N N 420 PRO CG CD sing N N 421 PRO CG HG2 sing N N 422 PRO CG HG3 sing N N 423 PRO CD HD2 sing N N 424 PRO CD HD3 sing N N 425 PRO OXT HXT sing N N 426 SER N CA sing N N 427 SER N H sing N N 428 SER N H2 sing N N 429 SER CA C sing N N 430 SER CA CB sing N N 431 SER CA HA sing N N 432 SER C O doub N N 433 SER C OXT sing N N 434 SER CB OG sing N N 435 SER CB HB2 sing N N 436 SER CB HB3 sing N N 437 SER OG HG sing N N 438 SER OXT HXT sing N N 439 THR N CA sing N N 440 THR N H sing N N 441 THR N H2 sing N N 442 THR CA C sing N N 443 THR CA CB sing N N 444 THR CA HA sing N N 445 THR C O doub N N 446 THR C OXT sing N N 447 THR CB OG1 sing N N 448 THR CB CG2 sing N N 449 THR CB HB sing N N 450 THR OG1 HG1 sing N N 451 THR CG2 HG21 sing N N 452 THR CG2 HG22 sing N N 453 THR CG2 HG23 sing N N 454 THR OXT HXT sing N N 455 TRP N CA sing N N 456 TRP N H sing N N 457 TRP N H2 sing N N 458 TRP CA C sing N N 459 TRP CA CB sing N N 460 TRP CA HA sing N N 461 TRP C O doub N N 462 TRP C OXT sing N N 463 TRP CB CG sing N N 464 TRP CB HB2 sing N N 465 TRP CB HB3 sing N N 466 TRP CG CD1 doub Y N 467 TRP CG CD2 sing Y N 468 TRP CD1 NE1 sing Y N 469 TRP CD1 HD1 sing N N 470 TRP CD2 CE2 doub Y N 471 TRP CD2 CE3 sing Y N 472 TRP NE1 CE2 sing Y N 473 TRP NE1 HE1 sing N N 474 TRP CE2 CZ2 sing Y N 475 TRP CE3 CZ3 doub Y N 476 TRP CE3 HE3 sing N N 477 TRP CZ2 CH2 doub Y N 478 TRP CZ2 HZ2 sing N N 479 TRP CZ3 CH2 sing Y N 480 TRP CZ3 HZ3 sing N N 481 TRP CH2 HH2 sing N N 482 TRP OXT HXT sing N N 483 TYR N CA sing N N 484 TYR N H sing N N 485 TYR N H2 sing N N 486 TYR CA C sing N N 487 TYR CA CB sing N N 488 TYR CA HA sing N N 489 TYR C O doub N N 490 TYR C OXT sing N N 491 TYR CB CG sing N N 492 TYR CB HB2 sing N N 493 TYR CB HB3 sing N N 494 TYR CG CD1 doub Y N 495 TYR CG CD2 sing Y N 496 TYR CD1 CE1 sing Y N 497 TYR CD1 HD1 sing N N 498 TYR CD2 CE2 doub Y N 499 TYR CD2 HD2 sing N N 500 TYR CE1 CZ doub Y N 501 TYR CE1 HE1 sing N N 502 TYR CE2 CZ sing Y N 503 TYR CE2 HE2 sing N N 504 TYR CZ OH sing N N 505 TYR OH HH sing N N 506 TYR OXT HXT sing N N 507 VAL N CA sing N N 508 VAL N H sing N N 509 VAL N H2 sing N N 510 VAL CA C sing N N 511 VAL CA CB sing N N 512 VAL CA HA sing N N 513 VAL C O doub N N 514 VAL C OXT sing N N 515 VAL CB CG1 sing N N 516 VAL CB CG2 sing N N 517 VAL CB HB sing N N 518 VAL CG1 HG11 sing N N 519 VAL CG1 HG12 sing N N 520 VAL CG1 HG13 sing N N 521 VAL CG2 HG21 sing N N 522 VAL CG2 HG22 sing N N 523 VAL CG2 HG23 sing N N 524 VAL OXT HXT sing N N 525 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 6CCG 'double helix' 6CCG 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DG 1 1_555 D DC 12 1_555 -0.320 -0.117 -0.095 -0.007 -6.303 0.295 1 C_DG1:DC12_D C 1 ? D 12 ? 19 1 1 C DC 2 1_555 D DG 11 1_555 0.146 -0.081 0.383 -7.535 -8.239 -2.021 2 C_DC2:DG11_D C 2 ? D 11 ? 19 1 1 C DC 3 1_555 D DG 10 1_555 0.477 -0.233 0.173 0.401 -12.181 -3.131 3 C_DC3:DG10_D C 3 ? D 10 ? 19 1 1 C DA 4 1_555 D DT 9 1_555 0.071 -0.078 0.063 -1.582 -10.995 0.431 4 C_DA4:DT9_D C 4 ? D 9 ? 20 1 1 C DG 5 1_555 D DC 8 1_555 -0.200 -0.049 0.198 -1.490 -5.106 -0.048 5 C_DG5:DC8_D C 5 ? D 8 ? 19 1 1 C 5CM 6 1_555 D DG 7 1_555 0.276 -0.250 0.203 -4.046 -3.181 -4.948 6 C_5CM6:DG7_D C 6 ? D 7 ? 19 1 1 C DG 7 1_555 D 5CM 6 1_555 -0.307 -0.213 -0.190 -4.963 -4.962 -0.462 7 C_DG7:5CM6_D C 7 ? D 6 ? 19 1 1 C DC 8 1_555 D DG 5 1_555 0.078 -0.085 0.296 -2.169 -6.934 -0.507 8 C_DC8:DG5_D C 8 ? D 5 ? 19 1 1 C DT 9 1_555 D DA 4 1_555 0.198 -0.121 -0.002 4.019 -10.191 0.364 9 C_DT9:DA4_D C 9 ? D 4 ? 20 1 1 C DG 10 1_555 D DC 3 1_555 -0.713 -0.161 0.132 -0.497 -10.729 -0.788 10 C_DG10:DC3_D C 10 ? D 3 ? 19 1 1 C DG 11 1_555 D DC 2 1_555 -0.295 -0.122 0.209 3.864 -8.112 -1.145 11 C_DG11:DC2_D C 11 ? D 2 ? 19 1 1 C DC 12 1_555 D DG 1 1_555 0.313 -0.107 -0.020 -1.495 -4.173 1.249 12 C_DC12:DG1_D C 12 ? D 1 ? 19 1 1 E DG 1 1_555 F DC 12 1_555 -0.282 -0.145 -0.162 -0.820 -4.441 -1.418 13 E_DG1:DC12_F E 1 ? F 12 ? 19 1 1 E DC 2 1_555 F DG 11 1_555 0.058 -0.062 0.252 -8.254 -9.194 -3.244 14 E_DC2:DG11_F E 2 ? F 11 ? 19 1 1 E DC 3 1_555 F DG 10 1_555 0.338 -0.245 0.092 -1.270 -8.482 -3.887 15 E_DC3:DG10_F E 3 ? F 10 ? 19 1 1 E DA 4 1_555 F DT 9 1_555 0.036 -0.107 0.020 -4.164 -8.133 -0.293 16 E_DA4:DT9_F E 4 ? F 9 ? 20 1 1 E DG 5 1_555 F DC 8 1_555 -0.177 -0.151 0.152 -3.964 -6.694 -2.382 17 E_DG5:DC8_F E 5 ? F 8 ? 19 1 1 E 5CM 6 1_555 F DG 7 1_555 0.300 -0.123 0.107 -2.605 -1.412 -4.817 18 E_5CM6:DG7_F E 6 ? F 7 ? 19 1 1 E DG 7 1_555 F 5CM 6 1_555 -0.313 -0.110 -0.102 -2.967 -4.689 -0.195 19 E_DG7:5CM6_F E 7 ? F 6 ? 19 1 1 E DC 8 1_555 F DG 5 1_555 0.028 -0.154 0.339 -2.840 -8.859 -1.617 20 E_DC8:DG5_F E 8 ? F 5 ? 19 1 1 E DT 9 1_555 F DA 4 1_555 0.002 -0.141 0.028 4.184 -10.229 -0.314 21 E_DT9:DA4_F E 9 ? F 4 ? 20 1 1 E DG 10 1_555 F DC 3 1_555 -0.640 -0.177 0.016 -3.048 -9.979 -2.745 22 E_DG10:DC3_F E 10 ? F 3 ? 19 1 1 E DG 11 1_555 F DC 2 1_555 -0.154 -0.104 0.223 1.942 -8.089 -2.979 23 E_DG11:DC2_F E 11 ? F 2 ? 19 1 1 E DC 12 1_555 F DG 1 1_555 0.398 -0.042 -0.106 -1.060 -4.659 2.703 24 E_DC12:DG1_F E 12 ? F 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DG 1 1_555 D DC 12 1_555 C DC 2 1_555 D DG 11 1_555 -0.995 -0.417 3.426 -5.223 -1.091 36.244 -0.503 0.815 3.541 -1.743 8.339 36.622 1 CC_DG1DC2:DG11DC12_DD C 1 ? D 12 ? C 2 ? D 11 ? 1 C DC 2 1_555 D DG 11 1_555 C DC 3 1_555 D DG 10 1_555 -0.196 0.524 3.145 3.523 3.458 30.161 0.331 1.048 3.141 6.589 -6.713 30.553 2 CC_DC2DC3:DG10DG11_DD C 2 ? D 11 ? C 3 ? D 10 ? 1 C DC 3 1_555 D DG 10 1_555 C DA 4 1_555 D DT 9 1_555 0.253 2.582 3.286 1.133 -7.452 49.198 3.588 -0.222 2.895 -8.890 -1.352 49.736 3 CC_DC3DA4:DT9DG10_DD C 3 ? D 10 ? C 4 ? D 9 ? 1 C DA 4 1_555 D DT 9 1_555 C DG 5 1_555 D DC 8 1_555 0.341 0.178 3.334 -3.751 7.786 29.211 -1.252 -1.416 3.206 15.028 7.241 30.436 4 CC_DA4DG5:DC8DT9_DD C 4 ? D 9 ? C 5 ? D 8 ? 1 C DG 5 1_555 D DC 8 1_555 C 5CM 6 1_555 D DG 7 1_555 -0.007 -0.562 3.397 0.100 0.443 30.649 -1.153 0.033 3.389 0.839 -0.190 30.652 5 CC_DG55CM6:DG7DC8_DD C 5 ? D 8 ? C 6 ? D 7 ? 1 C 5CM 6 1_555 D DG 7 1_555 C DG 7 1_555 D 5CM 6 1_555 0.619 0.226 3.404 6.323 1.465 42.703 0.155 -0.187 3.462 1.998 -8.623 43.171 6 CC_5CM6DG7:5CM6DG7_DD C 6 ? D 7 ? C 7 ? D 6 ? 1 C DG 7 1_555 D 5CM 6 1_555 C DC 8 1_555 D DG 5 1_555 -0.998 -0.268 3.250 -5.089 2.403 31.791 -0.914 0.878 3.337 4.345 9.200 32.272 7 CC_DG7DC8:DG55CM6_DD C 7 ? D 6 ? C 8 ? D 5 ? 1 C DC 8 1_555 D DG 5 1_555 C DT 9 1_555 D DA 4 1_555 -0.366 0.024 3.149 2.355 4.717 27.351 -1.033 1.300 3.068 9.859 -4.922 27.845 8 CC_DC8DT9:DA4DG5_DD C 8 ? D 5 ? C 9 ? D 4 ? 1 C DT 9 1_555 D DA 4 1_555 C DG 10 1_555 D DC 3 1_555 0.189 2.039 3.364 -0.678 -3.968 44.798 3.025 -0.308 3.179 -5.195 0.888 44.970 9 CC_DT9DG10:DC3DA4_DD C 9 ? D 4 ? C 10 ? D 3 ? 1 C DG 10 1_555 D DC 3 1_555 C DG 11 1_555 D DC 2 1_555 0.041 0.414 3.266 -2.800 4.127 31.907 0.008 -0.574 3.277 7.450 5.055 32.285 10 CC_DG10DG11:DC2DC3_DD C 10 ? D 3 ? C 11 ? D 2 ? 1 C DG 11 1_555 D DC 2 1_555 C DC 12 1_555 D DG 1 1_555 0.782 -0.390 3.372 3.273 0.358 36.981 -0.663 -0.773 3.423 0.562 -5.148 37.122 11 CC_DG11DC12:DG1DC2_DD C 11 ? D 2 ? C 12 ? D 1 ? 1 E DG 1 1_555 F DC 12 1_555 E DC 2 1_555 F DG 11 1_555 -0.969 -0.410 3.424 -4.466 -1.013 35.369 -0.513 0.892 3.526 -1.659 7.312 35.655 12 EE_DG1DC2:DG11DC12_FF E 1 ? F 12 ? E 2 ? F 11 ? 1 E DC 2 1_555 F DG 11 1_555 E DC 3 1_555 F DG 10 1_555 -0.206 0.505 3.156 2.600 5.829 29.762 -0.177 0.900 3.166 11.186 -4.989 30.424 13 EE_DC2DC3:DG10DG11_FF E 2 ? F 11 ? E 3 ? F 10 ? 1 E DC 3 1_555 F DG 10 1_555 E DA 4 1_555 F DT 9 1_555 0.236 2.621 3.314 -0.628 -7.774 50.194 3.580 -0.317 2.901 -9.100 0.735 50.757 14 EE_DC3DA4:DT9DG10_FF E 3 ? F 10 ? E 4 ? F 9 ? 1 E DA 4 1_555 F DT 9 1_555 E DG 5 1_555 F DC 8 1_555 0.182 0.067 3.360 -3.646 7.198 29.446 -1.345 -1.091 3.240 13.836 7.008 30.508 15 EE_DA4DG5:DC8DT9_FF E 4 ? F 9 ? E 5 ? F 8 ? 1 E DG 5 1_555 F DC 8 1_555 E 5CM 6 1_555 F DG 7 1_555 -0.174 -0.435 3.325 0.971 1.998 30.961 -1.201 0.513 3.284 3.737 -1.817 31.039 16 EE_DG55CM6:DG7DC8_FF E 5 ? F 8 ? E 6 ? F 7 ? 1 E 5CM 6 1_555 F DG 7 1_555 E DG 7 1_555 F 5CM 6 1_555 0.678 0.170 3.425 3.805 -0.304 41.885 0.270 -0.529 3.469 -0.424 -5.309 42.051 17 EE_5CM6DG7:5CM6DG7_FF E 6 ? F 7 ? E 7 ? F 6 ? 1 E DG 7 1_555 F 5CM 6 1_555 E DC 8 1_555 F DG 5 1_555 -1.130 -0.225 3.293 -4.425 2.660 31.909 -0.888 1.224 3.385 4.799 7.983 32.313 18 EE_DG7DC8:DG55CM6_FF E 7 ? F 6 ? E 8 ? F 5 ? 1 E DC 8 1_555 F DG 5 1_555 E DT 9 1_555 F DA 4 1_555 -0.409 0.003 3.135 2.370 4.074 26.409 -0.996 1.466 3.053 8.827 -5.135 26.819 19 EE_DC8DT9:DA4DG5_FF E 8 ? F 5 ? E 9 ? F 4 ? 1 E DT 9 1_555 F DA 4 1_555 E DG 10 1_555 F DC 3 1_555 0.142 2.063 3.426 0.398 -3.704 47.409 2.864 -0.143 3.266 -4.599 -0.494 47.547 20 EE_DT9DG10:DC3DA4_FF E 9 ? F 4 ? E 10 ? F 3 ? 1 E DG 10 1_555 F DC 3 1_555 E DG 11 1_555 F DC 2 1_555 0.054 0.274 3.219 -3.419 4.122 31.486 -0.241 -0.711 3.204 7.528 6.244 31.927 21 EE_DG10DG11:DC2DC3_FF E 10 ? F 3 ? E 11 ? F 2 ? 1 E DG 11 1_555 F DC 2 1_555 E DC 12 1_555 F DG 1 1_555 0.938 -0.382 3.305 4.290 -0.146 36.291 -0.589 -0.889 3.391 -0.233 -6.857 36.536 22 EE_DG11DC12:DG1DC2_FF E 11 ? F 2 ? E 12 ? F 1 ? # _atom_sites.entry_id 6CCG _atom_sites.fract_transf_matrix[1][1] 0.013837 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000585 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.027427 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007650 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S X # loop_