HEADER VIRAL PROTEIN 07-FEB-18 6CCJ TITLE NMR STRUCTURE OF THE ROUS SARCOMA VIRUS MATRIX PROTEIN (M DOMAIN) COMPND MOL_ID: 1; COMPND 2 MOLECULE: VIRUS MATRIX PROTEIN; COMPND 3 CHAIN: A; COMPND 4 EC: 2.7.7.-,3.1.-.-; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES; COMPND 7 OTHER_DETAILS: M DOMAIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ROUS SARCOMA VIRUS (STRAIN PRAGUE C); SOURCE 3 ORGANISM_COMMON: RSV-PRC; SOURCE 4 ORGANISM_TAXID: 11888; SOURCE 5 STRAIN: PRAGUE C; SOURCE 6 GENE: GAG-POL; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RSV, ASV, MATRIX, GAG, HELIX, VIRAL PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR J.VLACH,J.SAAD REVDAT 4 14-JUN-23 6CCJ 1 REMARK REVDAT 3 11-DEC-19 6CCJ 1 REMARK REVDAT 2 19-DEC-18 6CCJ 1 JRNL REVDAT 1 24-OCT-18 6CCJ 0 JRNL AUTH J.VLACH,G.N.EASTEP,R.H.GHANAM,S.M.WATANABE,C.A.CARTER, JRNL AUTH 2 J.S.SAAD JRNL TITL STRUCTURAL BASIS FOR TARGETING AVIAN SARCOMA VIRUS GAG JRNL TITL 2 POLYPROTEIN TO THE PLASMA MEMBRANE FOR VIRUS ASSEMBLY. JRNL REF J. BIOL. CHEM. V. 293 18828 2018 JRNL REFN ESSN 1083-351X JRNL PMID 30309983 JRNL DOI 10.1074/JBC.RA118.003944 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 6CCJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-FEB-18. REMARK 100 THE DEPOSITION ID IS D_1000232545. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 305 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 0.1 REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 0.5 MM [U-95% 13C; U-95% 15N] REMARK 210 RSV MA, 50 MM SODIUM PHOSPHATE, REMARK 210 50 MM SODIUM CHLORIDE, 2 MM TCEP, REMARK 210 95% H2O/5% D2O; .5 MM [U-95% REMARK 210 15N] MATRIX PROTEIN, 50 MM REMARK 210 SODIUM PHOSPHATE, 50 MM SODIUM REMARK 210 CHLORIDE, 2 M TCEP, 95% H2O/5% REMARK 210 D2O; 0.5 MM [U-95% 13C] MATRIX REMARK 210 PROTEIN, 50 MM SODIUM PHOSPHATE, REMARK 210 50 MM SODIUM CHLORIDE, 2 MM TCEP, REMARK 210 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCA; 3D REMARK 210 HN(CO)CA; 3D HNCACB; 3D CBCA(CO) REMARK 210 NH; 3D HCCH-TOCSY; 2D 1H-13C REMARK 210 HSQC; 3D 1H-15N TOCSY-HSQC; 3D REMARK 210 1H-15N NOESY-HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE II REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, ANALYSIS, UNIO REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 80 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 19 21.76 -156.05 REMARK 500 1 PRO A 21 -170.84 -69.74 REMARK 500 1 PRO A 48 90.28 -69.76 REMARK 500 1 SER A 68 31.45 -172.61 REMARK 500 2 LYS A 18 46.24 -91.25 REMARK 500 2 THR A 19 18.41 -149.79 REMARK 500 2 PRO A 21 -170.95 -69.69 REMARK 500 2 LEU A 38 -62.38 -90.51 REMARK 500 2 PRO A 48 65.57 -69.79 REMARK 500 2 SER A 68 -75.02 -88.11 REMARK 500 3 TYR A 15 -76.63 -77.26 REMARK 500 3 LYS A 18 45.67 -90.73 REMARK 500 3 THR A 19 15.11 -145.18 REMARK 500 3 PRO A 48 91.87 -69.79 REMARK 500 3 GLU A 86 40.49 -96.01 REMARK 500 4 TYR A 15 -74.91 -74.95 REMARK 500 4 LYS A 18 44.30 -91.73 REMARK 500 4 THR A 19 17.45 -148.50 REMARK 500 4 PRO A 48 87.82 -69.74 REMARK 500 4 LEU A 65 -62.93 -108.88 REMARK 500 5 SER A 20 160.33 -48.42 REMARK 500 5 PRO A 21 -170.60 -69.77 REMARK 500 5 PRO A 48 91.04 -69.77 REMARK 500 5 SER A 68 -75.65 -100.85 REMARK 500 6 TYR A 15 -76.79 -77.99 REMARK 500 6 LYS A 18 47.52 -89.95 REMARK 500 6 THR A 19 17.52 -148.74 REMARK 500 6 LEU A 38 -67.65 -100.16 REMARK 500 6 PRO A 48 71.87 -69.73 REMARK 500 6 SER A 50 14.31 -149.84 REMARK 500 7 TYR A 15 -76.61 -78.88 REMARK 500 7 PRO A 48 65.37 -69.80 REMARK 500 7 SER A 68 -75.08 -88.13 REMARK 500 8 THR A 19 -26.49 178.87 REMARK 500 8 SER A 20 160.51 -45.35 REMARK 500 8 PRO A 21 -170.76 -69.77 REMARK 500 8 PRO A 48 90.42 -69.69 REMARK 500 8 LEU A 65 -64.59 -102.07 REMARK 500 9 TYR A 15 -73.60 -77.69 REMARK 500 9 THR A 19 17.05 -147.93 REMARK 500 9 LEU A 38 -62.44 -90.42 REMARK 500 9 PRO A 48 65.26 -69.69 REMARK 500 9 LEU A 65 -60.40 -100.09 REMARK 500 10 THR A 19 18.89 -150.67 REMARK 500 10 PRO A 21 -170.91 -69.75 REMARK 500 10 PRO A 48 69.07 -69.83 REMARK 500 10 SER A 50 10.05 -143.95 REMARK 500 11 TYR A 15 -60.05 -94.26 REMARK 500 11 LYS A 18 47.55 -90.44 REMARK 500 11 THR A 19 19.20 -151.44 REMARK 500 REMARK 500 THIS ENTRY HAS 102 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 27396 RELATED DB: BMRB DBREF 6CCJ A 2 87 UNP P03354 POL_RSVP 2 87 SEQADV 6CCJ SER A 1 UNP P03354 EXPRESSION TAG SEQRES 1 A 87 SER GLU ALA VAL ILE LYS VAL ILE SER SER ALA CYS LYS SEQRES 2 A 87 THR TYR CYS GLY LYS THR SER PRO SER LYS LYS GLU ILE SEQRES 3 A 87 GLY ALA MET LEU SER LEU LEU GLN LYS GLU GLY LEU LEU SEQRES 4 A 87 MET SER PRO SER ASP LEU TYR SER PRO GLY SER TRP ASP SEQRES 5 A 87 PRO ILE THR ALA ALA LEU SER GLN ARG ALA MET ILE LEU SEQRES 6 A 87 GLY LYS SER GLY GLU LEU LYS THR TRP GLY LEU VAL LEU SEQRES 7 A 87 GLY ALA LEU LYS ALA ALA ARG GLU GLU HELIX 1 AA1 GLU A 2 CYS A 16 1 15 HELIX 2 AA2 SER A 22 LEU A 30 1 9 HELIX 3 AA3 SER A 31 GLU A 36 1 6 HELIX 4 AA4 SER A 41 SER A 47 5 7 HELIX 5 AA5 SER A 50 GLY A 66 1 17 HELIX 6 AA6 SER A 68 GLU A 87 1 20 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1