HEADER HYDROLASE 14-FEB-18 6CFC TITLE CRYSTAL STRUCTURE OF SOLUBLE LYTIC TRANSGLYCOSYLASE CJ0843 OF TITLE 2 CAMPYLOBACTER JEJUNI IN COMPLEX WITH BULGECIN A COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYTIC TRANSGLYCOSYLASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 18-540; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAMPYLOBACTER JEJUNI; SOURCE 3 ORGANISM_TAXID: 197; SOURCE 4 GENE: BD28_04025; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR F.VAN DEN AKKER,V.KUMAR REVDAT 3 04-OCT-23 6CFC 1 REMARK REVDAT 2 06-JUN-18 6CFC 1 TITLE REVDAT 1 30-MAY-18 6CFC 0 JRNL AUTH J.VIJAYARAGHAVAN,V.KUMAR,N.P.KRISHNAN,R.T.KAUFHOLD,X.ZENG, JRNL AUTH 2 J.LIN,F.VAN DEN AKKER JRNL TITL STRUCTURAL STUDIES AND MOLECULAR DYNAMICS SIMULATIONS JRNL TITL 2 SUGGEST A PROCESSIVE MECHANISM OF EXOLYTIC LYTIC JRNL TITL 3 TRANSGLYCOSYLASE FROM CAMPYLOBACTER JEJUNI. JRNL REF PLOS ONE V. 13 97136 2018 JRNL REFN ESSN 1932-6203 JRNL PMID 29758058 JRNL DOI 10.1371/JOURNAL.PONE.0197136 REMARK 2 REMARK 2 RESOLUTION. 2.04 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0135 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.04 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 64.34 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 37371 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.177 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1920 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.04 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.09 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2683 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.55 REMARK 3 BIN R VALUE (WORKING SET) : 0.2440 REMARK 3 BIN FREE R VALUE SET COUNT : 167 REMARK 3 BIN FREE R VALUE : 0.2880 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4192 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 80 REMARK 3 SOLVENT ATOMS : 291 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.49 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.181 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.160 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.119 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.469 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4389 ; 0.010 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 4169 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5931 ; 1.314 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9613 ; 0.977 ; 3.003 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 508 ; 5.270 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 218 ;37.127 ;24.908 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 808 ;14.078 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 17 ;13.595 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 644 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4861 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1042 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 6CFC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-FEB-18. REMARK 100 THE DEPOSITION ID IS D_1000232657. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-APR-17 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 S 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39342 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.040 REMARK 200 RESOLUTION RANGE LOW (A) : 64.340 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.04 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.09 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 6CF8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M LITHIUM SULFATE, 0.1 M TRIS PH REMARK 280 8.5 AND 25% (W/V) PEG 3350. BULGECIN A WAS SOAKED INTO THE REMARK 280 CRYSTAL AT 2.4MM CONCENTRATION FOR 40 MIN AT ROOM TEMPERATURE REMARK 280 PRIOR TO FREEZING THE CRYSTAL, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.48700 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 126.97400 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 126.97400 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 63.48700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 18 REMARK 465 GLN A 19 REMARK 465 ILE A 74 REMARK 465 PRO A 75 REMARK 465 LEU A 76 REMARK 465 LYS A 77 REMARK 465 PRO A 78 REMARK 465 TYR A 79 REMARK 465 ILE A 80 REMARK 465 ASN A 533 REMARK 465 LYS A 534 REMARK 465 ALA A 535 REMARK 465 ASN A 536 REMARK 465 ASP A 537 REMARK 465 LEU A 538 REMARK 465 ASN A 539 REMARK 465 LYS A 540 REMARK 465 SER A 541 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 72 12.99 -65.41 REMARK 500 ASN A 184 31.49 -83.61 REMARK 500 GLU A 218 -133.69 50.53 REMARK 500 ASN A 302 75.53 -155.71 REMARK 500 ASN A 308 -155.00 -136.56 REMARK 500 LYS A 454 -70.48 68.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 991 DISTANCE = 5.94 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BLG A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 607 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 608 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 609 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 610 DBREF1 6CFC A 19 541 UNP A0A1L7J388_CAMJU DBREF2 6CFC A A0A1L7J388 18 540 SEQADV 6CFC MET A 18 UNP A0A1L7J38 INITIATING METHIONINE SEQRES 1 A 524 MET GLN TYR SER ILE GLU LYS LEU LYS LYS GLU GLU ASN SEQRES 2 A 524 SER LEU ALA LYS ASP TYR TYR ILE TYR ARG LEU LEU GLU SEQRES 3 A 524 LYS ASN LYS ILE SER LYS LYS ASP ALA GLN ASP LEU ASN SEQRES 4 A 524 SER HIS ILE PHE ARG TYR ILE GLY LYS ILE LYS SER GLU SEQRES 5 A 524 LEU GLU LYS ILE ILE PRO LEU LYS PRO TYR ILE ASN PRO SEQRES 6 A 524 LYS TYR ALA LYS CYS TYR THR TYR THR ALA ASN THR ILE SEQRES 7 A 524 LEU ASP ALA ASN LEU THR CYS GLN SER VAL ARG LEU ASN SEQRES 8 A 524 SER LEU VAL PHE ILE ALA SER LEU ASN SER LYS ASP ARG SEQRES 9 A 524 THR THR LEU ALA GLN THR PHE LYS ASN GLN ARG PRO ASP SEQRES 10 A 524 LEU THR ASN LEU LEU LEU ALA PHE ASN THR SER ASP PRO SEQRES 11 A 524 MET SER TYR ILE VAL GLN LYS GLU ASP ILE ASN GLY PHE SEQRES 12 A 524 PHE LYS LEU TYR ASN TYR SER LYS LYS TYR ASP LEU ASP SEQRES 13 A 524 LEU ASN THR SER LEU VAL ASN LYS LEU PRO ASN HIS ILE SEQRES 14 A 524 GLY PHE LYS ASP PHE ALA GLN ASN ILE ILE ILE LYS LYS SEQRES 15 A 524 GLU ASN PRO LYS PHE ARG HIS SER MET LEU GLU ILE ASN SEQRES 16 A 524 PRO GLU ASN VAL SER GLU ASP SER ALA PHE TYR LEU GLY SEQRES 17 A 524 VAL ASN ALA LEU THR TYR ASP LYS THR GLU LEU ALA TYR SEQRES 18 A 524 ASP PHE PHE LYS LYS ALA ALA GLN SER PHE LYS SER GLN SEQRES 19 A 524 SER ASN LYS ASP ASN ALA ILE PHE TRP MET TRP LEU ILE SEQRES 20 A 524 LYS ASN ASN GLU GLU ASP LEU LYS THR LEU SER GLN SER SEQRES 21 A 524 SER SER LEU ASN ILE TYR SER LEU TYR ALA LYS GLU LEU SEQRES 22 A 524 THR ASN THR PRO PHE PRO LYS ILE GLU SER LEU ASN PRO SEQRES 23 A 524 SER LYS LYS LYS ASN ASN PHE ASN MET GLN ASP PRO PHE SEQRES 24 A 524 ALA TRP GLN LYS ILE ASN LYS GLN ILE ARG ASP ALA ASN SEQRES 25 A 524 ALA SER GLN LEU ASP VAL LEU ALA LYS GLU PHE ASP THR SEQRES 26 A 524 GLN GLU THR LEU PRO ILE TYR ALA TYR ILE LEU GLU ARG SEQRES 27 A 524 LYS ASN ASN PHE LYS LYS HIS TYR PHE ILE MET PRO TYR SEQRES 28 A 524 TYR ASP ASN ILE LYS ASP TYR ASN LYS THR ARG GLN ALA SEQRES 29 A 524 LEU ILE LEU ALA ILE ALA ARG GLN GLU SER ARG PHE ILE SEQRES 30 A 524 PRO THR ALA ILE SER VAL SER TYR ALA LEU GLY MET MET SEQRES 31 A 524 GLN PHE MET PRO PHE LEU ALA ASN HIS ILE GLY GLU LYS SEQRES 32 A 524 GLU LEU LYS ILE PRO ASN PHE ASP GLN ASP PHE MET PHE SEQRES 33 A 524 LYS PRO GLU ILE ALA TYR TYR PHE GLY ASN TYR HIS LEU SEQRES 34 A 524 ASN TYR LEU GLU SER ARG LEU LYS SER PRO LEU PHE VAL SEQRES 35 A 524 ALA TYR ALA TYR ASN GLY GLY ILE GLY PHE THR ASN ARG SEQRES 36 A 524 MET LEU ALA ARG ASN ASP MET PHE LYS THR GLY LYS PHE SEQRES 37 A 524 GLU PRO PHE LEU SER MET GLU LEU VAL PRO TYR GLN GLU SEQRES 38 A 524 SER ARG ILE TYR GLY LYS LYS VAL LEU ALA ASN TYR ILE SEQRES 39 A 524 VAL TYR ARG HIS LEU LEU ASN ASP SER ILE LYS ILE SER SEQRES 40 A 524 ASP ILE PHE GLU ASN LEU ILE GLN ASN LYS ALA ASN ASP SEQRES 41 A 524 LEU ASN LYS SER HET BLG A 601 35 HET SO4 A 602 5 HET SO4 A 603 5 HET SO4 A 604 5 HET SO4 A 605 5 HET SO4 A 606 5 HET SO4 A 607 5 HET SO4 A 608 5 HET SO4 A 609 5 HET SO4 A 610 5 HETNAM BLG 4-O-(4-O-SULFONYL-N-ACETYLGLUCOSAMININYL)-5- HETNAM 2 BLG METHYLHYDROXY-L-PROLINE-TAURINE HETNAM SO4 SULFATE ION HETSYN BLG BULGECIN A FORMUL 2 BLG C16 H30 N3 O14 S2 1+ FORMUL 3 SO4 9(O4 S 2-) FORMUL 12 HOH *291(H2 O) HELIX 1 AA1 SER A 21 LYS A 27 1 7 HELIX 2 AA2 SER A 31 LYS A 44 1 14 HELIX 3 AA3 SER A 48 GLN A 53 1 6 HELIX 4 AA4 ASP A 54 ILE A 59 5 6 HELIX 5 AA5 GLY A 64 LYS A 72 1 9 HELIX 6 AA6 TYR A 84 THR A 89 5 6 HELIX 7 AA7 THR A 94 ALA A 98 5 5 HELIX 8 AA8 ASN A 99 LEU A 107 1 9 HELIX 9 AA9 SER A 109 LEU A 116 1 8 HELIX 10 AB1 ASN A 117 LYS A 129 1 13 HELIX 11 AB2 ARG A 132 PHE A 142 1 11 HELIX 12 AB3 ASP A 146 GLU A 155 1 10 HELIX 13 AB4 ASP A 156 SER A 167 1 12 HELIX 14 AB5 ASN A 175 LEU A 182 1 8 HELIX 15 AB6 PRO A 183 HIS A 185 5 3 HELIX 16 AB7 GLY A 187 LYS A 198 1 12 HELIX 17 AB8 ASN A 201 MET A 208 1 8 HELIX 18 AB9 LEU A 209 ILE A 211 5 3 HELIX 19 AC1 ASN A 212 VAL A 216 5 5 HELIX 20 AC2 SER A 217 TYR A 231 1 15 HELIX 21 AC3 LYS A 233 PHE A 248 1 16 HELIX 22 AC4 SER A 250 ASN A 266 1 17 HELIX 23 AC5 ASN A 267 GLN A 276 1 10 HELIX 24 AC6 ASN A 281 THR A 291 1 11 HELIX 25 AC7 ASP A 314 ALA A 328 1 15 HELIX 26 AC8 ASN A 329 PHE A 340 1 12 HELIX 27 AC9 THR A 345 ASN A 357 1 13 HELIX 28 AD1 TYR A 368 ILE A 372 5 5 HELIX 29 AD2 ASN A 376 ARG A 392 1 17 HELIX 30 AD3 MET A 410 LYS A 420 1 11 HELIX 31 AD4 ASP A 428 PHE A 433 5 6 HELIX 32 AD5 LYS A 434 LYS A 454 1 21 HELIX 33 AD6 SER A 455 GLY A 466 1 12 HELIX 34 AD7 GLY A 466 ARG A 476 1 11 HELIX 35 AD8 PRO A 487 LEU A 493 1 7 HELIX 36 AD9 TYR A 496 LEU A 517 1 22 HELIX 37 AE1 LYS A 522 ASN A 529 1 8 SSBOND 1 CYS A 87 CYS A 102 1555 1555 2.06 CISPEP 1 GLU A 486 PRO A 487 0 1.28 SITE 1 AC1 18 GLU A 390 SER A 399 VAL A 400 SER A 401 SITE 2 AC1 18 ALA A 403 GLN A 408 PHE A 409 MET A 410 SITE 3 AC1 18 PHE A 412 LEU A 413 TYR A 463 ASN A 464 SITE 4 AC1 18 GLY A 466 GLU A 498 HOH A 750 HOH A 753 SITE 5 AC1 18 HOH A 808 HOH A 848 SITE 1 AC2 5 PHE A 248 LYS A 249 SER A 250 ASN A 253 SITE 2 AC2 5 LYS A 373 SITE 1 AC3 3 ARG A 326 ASN A 376 LYS A 377 SITE 1 AC4 4 LYS A 49 SER A 109 LEU A 110 VAL A 111 SITE 1 AC5 4 ARG A 132 PRO A 133 ASP A 134 LEU A 135 SITE 1 AC6 5 ASP A 219 PHE A 222 TYR A 223 ASN A 253 SITE 2 AC6 5 ARG A 500 SITE 1 AC7 7 TYR A 20 SER A 21 LYS A 24 ASP A 232 SITE 2 AC7 7 THR A 234 GLU A 235 HOH A 704 SITE 1 AC8 5 SER A 250 GLN A 251 SER A 252 SER A 279 SITE 2 AC8 5 HOH A 875 SITE 1 AC9 6 SER A 278 PRO A 296 LYS A 297 HIS A 362 SITE 2 AC9 6 HOH A 773 HOH A 829 SITE 1 AD1 6 GLU A 390 ALA A 397 ILE A 398 GLN A 408 SITE 2 AD1 6 HOH A 847 HOH A 902 CRYST1 74.294 74.294 190.461 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013460 0.007771 0.000000 0.00000 SCALE2 0.000000 0.015542 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005250 0.00000